Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	effect	AA_change	Repeat	AD659_dx
MT	13710	A->G	+	ENSG00000198786	MT-ND5	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.0731707
MT	15326	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
X	315276	A->G	-	ENSG00000178605	GTPBP6	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.410448
17	517588	A->G	-	ENSG00000141252	VPS53	protein_coding	exon	synonymous_variant	p.Pro->Pro	Alu	0.357143
17	517617	A->G	-	ENSG00000141252	VPS53	protein_coding	exon	missense_variant	p.Asn->Asp	Alu	0.2
17	517618	A->G	-	ENSG00000141252	VPS53	protein_coding	exon	synonymous_variant	p.Leu->Leu	Alu	0.4
X	1303267	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.0769231
X	1303292	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.137931
X	1303297	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.285714
X	1303316	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.0666667
X	1303329	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.16129
X	1412794	A->G	-	ENSG00000236017	ASMTL-AS1	antisense	CDS	missense_variant	p.His->Arg	Alu	0.514286
X	2221159	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	missense_variant	p.His->Arg	Alu	1
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.305556
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.0821918
12	6826812	A->G	+	ENSG00000250510	GPR162	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.439024
12	7097002	A->G	-	ENSG00000139178	C1RL	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	1
12	7496888	A->G	-	ENSG00000177575	CD163	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	1
12	7497057	A->G	-	ENSG00000177575	CD163	protein_coding	CDS	synonymous_variant	p.Gly->Gly	Alu	1
12	7936170	A->G	-	ENSG00000059804	SLC2A3	protein_coding	five_prime_utr	upstream_gene_variant	.	Alu	1
12	8773523	A->G	+	ENSG00000166532	RIMKLB	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.529412
3	9981710	A->G	-	ENSG00000125037	EMC3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.133333
4	15723435	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	splice_region_variant&synonymous_variant	p.Ser->Ser	Alu	0.25
17	15986849	A->G	-	ENSG00000214941	ZSWIM7	protein_coding	three_prime_utr	stop_lost	p.Ter->Trp	Alu	0.6875
17	15986880	A->G	-	ENSG00000214941	ZSWIM7	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.142857
17	15986888	A->G	-	ENSG00000214941	ZSWIM7	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.133333
10	17318709	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.075
10	17318710	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.552632
10	17318712	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.128205
10	17318717	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.375
10	17318718	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.309524
10	17318728	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	0.0882353
20	17659159	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.182796
20	17659189	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0679612
19	18071210	A->G	-	ENSG00000096996	IL12RB1	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.0526316
19	18071260	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.185185
19	18071287	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.0465116
19	18071289	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0731707
19	18071296	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.157895
19	18071320	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.363636
16	18868647	A->G	-	ENSG00000157106	SMG1	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.909091
16	18896930	A->G	-	ENSG00000157106	SMG1	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.509804
19	19177448	A->G	-	ENSG00000064489	BORCS8-MEF2B	protein_coding	exon	synonymous_variant	p.Ser->Ser	Alu	0.0625
1	19600799	A->G	+	ENSG00000173436	MINOS1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.153846
22	22099127	A->G	+	ENSG00000211638	IGLV8-61	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.15
22	22381153	A->G	+	ENSG00000211651	IGLV1-44	IG_V_gene	CDS	synonymous_variant	p.Val->Val	Alu	0.2
22	22698137	A->G	+	ENSG00000211660	IGLV2-23	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.0714286
22	22713143	A->G	+	ENSG00000211662	IGLV3-21	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.109589
22	22819525	A->G	+	ENSG00000211670	IGLV3-9	IG_V_gene	CDS	missense_variant	p.Ile->Val	Alu	0.666667
22	22819661	A->G	+	ENSG00000211670	IGLV3-9	IG_V_gene	CDS	missense_variant	p.Asn->Ser	Alu	0.235294
X	24173711	A->G	+	ENSG00000005889	ZFX	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.0555556
1	25802076	A->G	+	ENSG00000162430	SELENON	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0909091
18	26081328	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.142857
12	27030183	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.214286
15	28146325	A->G	-	ENSG00000128731	HERC2	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.2
6	29944139	A->G	+	ENSG00000206503	HLA-A	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.860465
16	30969637	A->G	+	ENSG00000099381	SETD1A	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.108108
6	31271074	A->G	-	ENSG00000204525	HLA-C	protein_coding	exon	splice_region_variant&synonymous_variant	p.Ala->Ala	Alu	1
6	32581698	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.933333
6	32761662	A->G	-	ENSG00000232629	HLA-DQB2	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	1
21	33262601	A->G	+	ENSG00000159110	IFNAR2	protein_coding	exon	missense_variant	p.His->Arg	Alu	0.0263158
21	33262623	A->G	+	ENSG00000159110	IFNAR2	protein_coding	exon	synonymous_variant	p.Leu->Leu	Alu	0.0246914
20	35713770	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0487805
20	35713827	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.108696
22	38961629	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	1
13	40951697	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
13	45516236	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.311475
17	47579460	A->G	+	ENSG00000141279	NPEPPS	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.12
X	47916291	A->G	+	ENSG00000197779	ZNF81	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.9
3	49360949	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0769231
10	49942262	A->G	+	ENSG00000204152	TIMM23B	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.25
19	50045942	A->G	+	ENSG00000269091	AC010624.3	antisense	CDS	missense_variant	p.Asn->Ser	Alu	0.5
3	52749810	A->G	-	ENSG00000114904	NEK4	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0447761
12	53296435	A->G	+	ENSG00000123349	PFDN5	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.294118
19	54221229	A->G	-	ENSG00000204577	LILRB3	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.333333
19	54222756	A->G	-	ENSG00000204577	LILRB3	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.407407
19	54596482	A->G	+	ENSG00000104974	LILRA1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.179412
11	61438300	A->G	+	ENSG00000167985	SDHAF2	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.363636
11	61438311	A->G	+	ENSG00000167985	SDHAF2	protein_coding	exon	synonymous_variant	p.Pro->Pro	Alu	0.181818
11	64256435	A->G	+	ENSG00000149782	PLCB3	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.517241
17	64350416	A->G	-	ENSG00000261371	PECAM1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.394831
17	68256848	A->G	+	ENSG00000196704	AMZ2	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.416667
12	68766636	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.3
12	68766670	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.125
12	68766684	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.142857
12	68766685	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.142857
12	68766688	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.285714
12	68766702	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.416667
12	68766703	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.666667
12	68766805	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.176471
12	68766819	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.136364
12	68766820	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.545455
12	68766837	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.125
12	68815704	A->G	+	ENSG00000135679	MDM2	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0327869
12	68815711	A->G	+	ENSG00000135679	MDM2	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0333333
12	69364221	A->G	+	ENSG00000127337	YEATS4	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.133333
2	69461688	A->G	-	ENSG00000115977	AAK1	protein_coding	exon	synonymous_variant	p.Pro->Pro	Alu	0.125
16	70130431	A->G	+	ENSG00000090857	PDPR	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.5
X	70419776	A->G	+	ENSG00000090889	KIF4A	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.952381
17	72838039	A->G	-	ENSG00000133195	SLC39A11	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.2
17	72838049	A->G	-	ENSG00000133195	SLC39A11	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.2
17	72838064	A->G	-	ENSG00000133195	SLC39A11	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.3
14	73924776	A->G	+	ENSG00000258653	AC005520.1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.2
14	73924777	A->G	+	ENSG00000258653	AC005520.1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.181818
15	76284368	A->G	-	ENSG00000140374	ETFA	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.2
16	77736718	A->G	+	ENSG00000140876	NUDT7	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0952381
16	77736726	A->G	+	ENSG00000140876	NUDT7	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0952381
18	79949602	A->G	-	ENSG00000122490	PQLC1	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.166667
17	81563959	A->G	-	ENSG00000182446	NPLOC4	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.142857
2	89010228	A->G	-	ENSG00000241755	IGKV1-9	IG_V_gene	CDS	synonymous_variant	p.Ala->Ala	Alu	0.0789474
2	89100020	A->G	-	ENSG00000240864	IGKV1-16	IG_V_gene	CDS	missense_variant	p.Lys->Glu	Alu	0.125
2	89100027	A->G	-	ENSG00000240864	IGKV1-16	IG_V_gene	CDS	synonymous_variant	p.Lys->Lys	Alu	0.130435
2	89100028	A->G	-	ENSG00000240864	IGKV1-16	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.136364
1	89133387	A->G	-	ENSG00000213512	GBP7	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	1
2	89213713	A->G	-	ENSG00000244575	IGKV1-27	IG_V_gene	CDS	missense_variant	p.Arg->Gly	Alu	0.0683761
2	89948177	A->G	+	ENSG00000243264	IGKV2D-29	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.3
9	93448457	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0344828
10	94607959	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	synonymous_variant	p.Ser->Ser	Alu	0.142857
10	94607987	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	missense_variant	p.Ser->Gly	Alu	0.1
2	95899186	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.25
2	95904788	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.181818
2	95904802	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.179487
2	95912299	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.115385
4	98886471	A->G	-	ENSG00000151247	EIF4E	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.117647
4	98886511	A->G	-	ENSG00000151247	EIF4E	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.176471
7	102566642	A->G	-	ENSG00000168255	POLR2J3	protein_coding	exon	missense_variant	p.Ile->Val	Alu	1
8	102829408	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.231388
8	102829409	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0582329
14	105625360	A->G	-	ENSG00000211892	IGHG4	IG_C_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.181356
14	105986843	A->G	-	ENSG00000211934	IGHV1-2	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0566038
14	106025281	A->G	-	ENSG00000282122	IGHV7-4-1	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.285714
14	106062229	A->G	-	ENSG00000211938	IGHV3-7	IG_V_gene	CDS	synonymous_variant	p.Arg->Arg	Alu	0.06
14	106062317	A->G	-	ENSG00000211938	IGHV3-7	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0681818
14	106153724	A->G	-	ENSG00000211943	IGHV3-15	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.142857
14	106153928	A->G	-	ENSG00000211943	IGHV3-15	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0571429
14	106422147	A->G	-	ENSG00000211959	IGHV4-39	IG_V_gene	CDS	missense_variant	p.Met->Val	Alu	0.0652174
14	106802894	A->G	-	ENSG00000211976	IGHV3-73	IG_V_gene	CDS	missense_variant	p.Met->Val	Alu	0.2
14	106810852	A->G	-	ENSG00000224650	IGHV3-74	IG_V_gene	CDS	missense_variant&splice_region_variant	p.Lys->Arg	Alu	0.0784314
10	112538253	A->G	+	ENSG00000151532	VTI1A	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.511811
10	119853190	A->G	-	ENSG00000197771	MCMBP	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.475362
1	120168929	A->G	-	ENSG00000265808	SEC22B	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.211268
10	124762529	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.119048
7	128502644	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.047619
7	128502689	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	missense_variant	p.Arg->Gly	Alu	0.0638298
2	135747721	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.272727
2	135747738	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.166667
7	142801067	A->G	+	ENSG00000211772	TRBC2	TR_C_gene	CDS	missense_variant	p.Lys->Glu	Alu	1
1	150748168	A->G	-	ENSG00000163131	CTSS	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
1	150748207	A->G	-	ENSG00000163131	CTSS	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.166667
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0368098
1	161589617	A->G	+	ENSG00000273112	AL590385.2	processed_transcript	CDS	synonymous_variant	p.Gln->Gln	Alu	0.176471
2	167955557	A->G	-	ENSG00000198648	STK39	protein_coding	CDS	missense_variant	p.Asp->Gly	Alu	0.636364
4	189957425	A->G	+	ENSG00000109536	FRG1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.25
2	218385460	A->G	+	ENSG00000018280	SLC11A1	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.0769231
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.25
1	225786898	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0526316
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.354167
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.101695
2	241324567	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.133333
2	241324570	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
2	241324571	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.176471
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.5
19	2292009	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.166667
10	16437386	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.228571
19	18560282	A->G	+	ENSG00000105700	KXD1	protein_coding	five_prime_utr	.	.	Alu	0.1
19	37324798	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.727273
21	37410605	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.454545
21	37410607	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.181818
21	37410645	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.133333
19	44662395	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.08
19	44662397	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.0731707
2	55266414	A->G	-	ENSG00000085760	MTIF2	protein_coding	five_prime_utr	.	.	Alu	0.117647
12	56731526	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.214286
12	56731531	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.307692
12	56731540	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.142857
16	57174194	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.142857
7	66740097	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.075
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.121951
7	66740125	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0526316
10	72220101	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.147059
10	72220134	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0895522
10	72220165	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0471698
10	72220174	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0357143
10	72220179	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0330579
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0423729
10	72220186	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.04
10	72220232	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0307692
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.320388
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.307692
10	72220329	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0740741
10	72220330	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0689655
14	92118874	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.0461538
14	92118887	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.109375
14	92118891	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.107692
14	92118922	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.38
3	150618776	A->G	+	ENSG00000198843	SELENOT	protein_coding	five_prime_utr	.	.	Alu	0.031746
3	179325052	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.108108
3	179325122	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.123077
3	179325201	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0408163
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.120482
3	179325255	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0416667
19	863695	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	1382989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383012	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	1383277	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383358	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	1383408	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
X	1383434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.318182
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
X	1383528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1383610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8
X	1384026	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1384034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.533333
X	1384095	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1384107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1384128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
X	1384165	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
X	1384402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1384412	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	1384418	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
X	1385010	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
X	1385081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	1590051	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.272727
19	1590359	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.545455
19	2292751	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.117647
19	2292752	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.352941
19	2293104	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2293145	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2293195	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2293206	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	2293942	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.363636
19	2293948	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.6
19	2294034	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.3
19	2294036	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1
18	2702199	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.230769
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	3501760	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.4
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.185185
2	3541909	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.111111
2	3541935	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	3541936	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0645161
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.25
2	3541987	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.133333
2	3543851	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.111111
2	3543887	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.1
X	3610360	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.176471
11	3698483	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.8
19	3759207	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.153846
17	5487171	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.222222
17	5487196	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.318182
20	5601507	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.352941
20	5601569	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
9	5701466	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.384615
9	6488096	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.181818
12	7923975	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.3
12	7923986	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.230769
19	8540530	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.25
19	8540547	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.142857
2	9523944	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
1	9927378	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0487805
1	9927385	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0789474
1	9927412	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.205128
1	9927422	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.09375
1	9927426	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.259259
1	9927466	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.133333
1	9927495	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.130435
1	9927515	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9927518	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.125
1	9927582	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.136364
1	9927874	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.5
1	9927891	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.285714
1	9927893	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.214286
1	9927894	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.266667
1	9927902	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.333333
1	9927907	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.3125
1	9927932	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.222222
1	9927937	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0740741
1	9927940	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0588235
1	9928049	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.128205
1	9928055	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0571429
1	9928072	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.121212
1	9928080	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0769231
1	9928089	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.368421
1	9928110	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.3125
1	9928132	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.5
1	9928632	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.20339
1	9928633	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.327869
1	9928634	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.307692
1	9928660	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0677966
1	9928691	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.147059
1	9928702	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0512821
1	9928708	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.105263
1	9928764	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0769231
1	9928768	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.137931
1	9928793	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.1875
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.123077
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.078125
3	10152258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0615385
3	10152262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0405405
3	10152271	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0410959
3	10152281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.025
3	10152290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.244186
3	10152297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0217391
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.301205
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0449438
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.207792
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.219512
3	10152567	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.723404
3	10152572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	10152587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0784314
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.346154
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.431818
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.439024
3	10152645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.189189
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.310345
3	10152692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10152733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10152737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
3	10152742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	10152751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
3	10152752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.52
3	10152764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.296296
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173077
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.46
3	10152887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.104167
3	10152888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0784314
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.270833
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	10152941	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162791
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.276596
3	10152966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10152972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
3	10152992	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	10153089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
3	10153119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.276923
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0701754
3	10153294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
3	10153298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0862069
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12963
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
3	10153370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10153374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.278689
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.101695
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0877193
3	10153408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0983607
3	10153409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0983607
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0655738
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.465517
3	10153414	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116667
12	10219239	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.266667
5	10368369	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.142857
5	10368371	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.428571
5	10368375	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	10368423	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.266667
5	10368557	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.454545
5	10368563	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.5
5	10368673	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.692308
5	10368679	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
5	10368680	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.307692
5	10368793	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
5	10368849	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
5	10759974	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.214286
5	10759982	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.133333
19	10930619	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.333333
19	10930632	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.136364
19	10930765	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.173913
19	10932938	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.916667
19	10933063	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.6
19	10933071	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	10933131	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.3
19	11450009	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.3
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.166667
19	11450324	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.3
19	11450356	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.5
19	11450380	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.2
19	11450386	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.2
19	11450392	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.571429
19	11450398	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.133333
19	11450409	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.909091
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.354839
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0645161
18	12031264	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.266667
18	12031271	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.428571
18	12031272	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.333333
18	12031308	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.166667
18	12031310	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.75
18	12031343	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.153846
18	12031355	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.545455
18	12031369	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.2
18	12031392	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.181818
18	12031407	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.666667
18	12031411	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.181818
18	12031424	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.692308
18	12031633	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.176471
18	12031660	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.105263
18	12031669	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.294118
18	12330205	A->G	+	ENSG00000141385	AFG3L2	protein_coding	Intergenic	.	.	Alu	0.0740741
19	12625547	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.363636
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.181818
19	13837515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0350877
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
19	13837925	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0638298
19	13838061	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	13838083	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0425532
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0564516
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.106796
19	13838286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0232558
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
19	13838300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0416667
19	13838303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.02
19	13838304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.02
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.409639
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103896
6	14121360	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.458333
6	14121377	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0833333
6	14121399	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.108696
6	14121412	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0363636
6	14121438	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.170213
6	14121439	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.148936
10	14905728	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.3
10	14906966	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.0909091
10	14907007	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.1
6	15254801	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.222222
6	15254853	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.228571
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.342857
6	15254863	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15254915	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0681818
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.196078
6	15270820	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	15270821	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.130435
6	15277993	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
3	15410470	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.181818
3	15410753	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.333333
3	15410783	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.461538
3	15410786	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.25
16	15700515	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.257143
16	15700607	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15700637	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15700685	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.2
16	15700686	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15700703	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15700725	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.117647
16	15701090	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.4375
16	15701100	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.461538
16	15701182	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.571429
16	15701186	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.785714
16	15701187	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.625
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.416667
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.416667
19	16083324	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.272727
19	16083395	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16084109	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16085168	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.454545
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.416667
17	16383008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5625
17	16383291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
17	16383882	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	16383909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
19	16636701	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16636731	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16636741	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.5
11	16740482	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.3
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.272727
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16756395	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.315789
11	16756396	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.111111
11	16756399	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0714286
11	16756409	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.111111
11	16756435	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.125
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.416667
11	16756451	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.434783
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.7
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.409091
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.458333
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.304348
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.535714
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.769231
11	17076686	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.12
10	17217058	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.0714286
11	17336087	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.105263
11	17336126	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17336171	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.294118
11	17336172	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	17336190	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.454545
11	17336994	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.235294
11	17337041	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17337045	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	17337082	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.551724
11	17337124	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0857143
11	17337126	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.222222
11	17337175	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0652174
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.225
11	17337773	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.125
11	17337807	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
10	17687313	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.153846
10	17687322	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.142857
10	17687336	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.357143
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.833333
10	17687471	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0606061
20	17962342	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.454545
17	18271812	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.230769
17	18271818	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.416667
17	18272722	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.166667
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.277778
17	18272820	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.363636
17	18272829	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.153846
19	18276129	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
19	18276166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
1	19598513	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.2
10	19852177	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.153846
10	19852184	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.166667
3	19952093	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0869565
X	20129393	A->G	-	ENSG00000173674	EIF1AX	protein_coding	Intergenic	.	.	Alu	0.08
2	20292880	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20345333	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
6	20551981	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.454545
1	20646017	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.2
1	20647741	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.363636
1	20647915	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.266667
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20755323	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0769231
1	20755333	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0888889
1	20755347	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.157895
1	20755350	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0625
1	20755465	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.235294
1	20755466	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.176471
1	20755561	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.1
1	20755569	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.368421
1	20756494	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.235294
1	20756758	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.375
1	20756783	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20756818	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20756847	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.47619
1	20756912	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.277778
1	20756913	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.111111
1	20756977	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.125
1	20756982	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.125
1	20756983	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
13	21442698	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.272727
16	21518154	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
10	21968608	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.692308
10	21968649	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.625
10	21986797	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	22632988	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.105263
3	23832959	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23848282	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23848307	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23848308	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23848349	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.6
3	23848350	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.7
16	23915476	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.636364
2	24347003	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	24347092	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.3
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.230769
22	24573021	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.769231
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.363636
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.206897
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.176471
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.101695
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.382353
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.122449
22	24573192	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0582524
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.186047
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.175
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.2875
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0543478
22	24573722	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0232558
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0352941
22	24573724	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0595238
22	24573725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0470588
22	24573726	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0352941
22	24573734	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0434783
22	24573787	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0483871
22	24573798	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1
22	24573801	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0655738
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.508772
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.214286
22	24573833	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.205479
22	24573838	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0547945
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.27027
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1
22	24574615	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0697674
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.862069
22	24574646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0571429
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0588235
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.516129
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.172414
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.222222
22	24574681	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.142857
22	24574694	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0666667
22	24574703	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.176471
22	24574708	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0789474
22	24574725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0526316
22	24574751	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0634921
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.460317
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0945946
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0266667
6	24710363	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.266667
6	24710377	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0952381
4	25279905	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
18	26169195	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.263158
18	26169219	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.103448
18	26169240	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.34375
18	26169241	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.0625
18	26169249	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.178571
18	26169683	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.2
18	26169733	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.181818
18	26169736	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.181818
10	26443193	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.4
10	27125779	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.285714
10	27125805	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.142857
1	27878029	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27878030	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.25
1	27880448	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3125
1	27880598	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	27880607	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.344828
1	27881401	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.285714
1	27881433	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27881434	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.235294
1	27881708	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
10	28525595	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.125
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.6
10	28525690	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.05
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.688889
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.214286
10	28525735	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.047619
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.625
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28539638	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.09375
10	28539639	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0666667
10	28539659	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0689655
10	28539684	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.107143
10	28539688	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.307692
10	28539698	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.103448
10	28539724	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.176471
10	28539725	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.157895
10	28539745	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.181818
10	28539759	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.2
10	28539760	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.2
20	28582315	A->G	-	ENSG00000282826	FRG1CP	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.307692
2	28786214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28786217	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28788932	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
16	28831469	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.363636
16	28831473	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
22	29198286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
22	29287369	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.15
22	29287944	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	29584361	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
14	30654440	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.181818
1	30752939	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.166667
1	30752978	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.153846
16	31121174	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.1
16	31121250	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.030303
16	31121254	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.135593
16	31121266	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0363636
16	31121881	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.142857
16	31121965	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.125
16	31122003	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.175
16	31122013	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0810811
16	31122624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5625
16	31122625	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.4375
16	31122630	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.111111
16	31122647	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31122692	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.3125
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.266667
16	31122707	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.214286
16	31122801	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.363636
16	31122926	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31122933	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31122966	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31122967	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.266667
16	31123240	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
16	31123242	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.631579
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5
16	31123317	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.176471
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.230769
16	31123346	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.35
16	31123362	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.631579
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.307692
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.157895
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.722222
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.473684
16	31123528	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.12
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.708333
16	31123560	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.37037
16	31123611	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0833333
16	31123636	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.117647
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.470588
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
1	31922752	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.3
10	32364260	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.181818
2	32372709	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32372731	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32396823	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.454545
15	32468136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
15	32580934	A->G	+	ENSG00000261064	LINC02256	lincRNA	Intergenic	.	.	Alu	0.125
9	33027432	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.08
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.2
9	33038085	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.136364
9	33038105	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.130435
9	33038108	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.173913
6	33260319	A->G	-	ENSG00000223501	VPS52	protein_coding	Intergenic	.	.	Alu	0.2
6	33260329	A->G	-	ENSG00000223501	VPS52	protein_coding	Intergenic	.	.	Alu	0.166667
11	33268091	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33268136	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	33268470	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.3
21	33405012	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33405986	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	33503716	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
21	34863749	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.153846
17	35076464	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.3
6	35683520	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.117647
6	35683576	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35683892	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.176471
6	35683914	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.294118
6	35683923	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.266667
6	35683976	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	35683991	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.238095
6	35684008	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.15
6	35684010	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.15
6	35684428	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.222222
6	35684429	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.277778
6	35684459	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.222222
20	35726332	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35728881	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.125
19	35770266	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.357143
19	35770300	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.363636
19	35770306	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.666667
19	35770312	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.166667
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0740741
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.117647
20	36913850	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36913851	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.25
20	36913891	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	36913900	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.307692
20	36913953	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.5
9	37504660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	37504673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
9	37505695	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	37505700	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	37893104	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.153846
8	37893171	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.136364
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.272727
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.391304
8	37893213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	37893269	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	37893278	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.1
8	37893668	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.538462
8	37893728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.404762
8	37893733	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	37893738	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.392857
8	38140460	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.3
19	38845162	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.166667
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.409091
14	39178838	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.133333
14	39178865	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.266667
1	40377052	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.115385
1	40377053	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0943396
1	40377214	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.129032
1	40377229	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0444444
1	40399647	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
4	40617394	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.2
13	40657038	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.25
13	40810424	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
13	40810425	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
13	40953141	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41011681	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0810811
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.125
20	41040748	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1
20	41041356	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	41042013	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	41042050	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.125
20	41042054	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41042090	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	42533581	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.461538
6	42940304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
6	42941455	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0408163
6	42941505	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.114286
6	42941508	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0571429
6	42941682	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.352941
6	42941689	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
6	42941710	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.357143
6	42941711	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.692308
6	42941842	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.375
6	42941860	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.130435
6	42941899	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.09375
6	42941906	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.129032
6	42941916	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.517241
6	42942033	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.173913
6	42942079	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42942192	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.285714
6	42942216	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42942223	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42942231	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.181818
6	42942320	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.181818
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.15
6	42942350	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.653846
6	42943140	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.105263
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.45
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0740741
6	42943175	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0588235
6	42943193	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.121951
6	42943213	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0487805
6	42943239	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0810811
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.225
6	42943241	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42943351	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	43029649	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.433333
6	43029665	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0869565
6	43029674	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.578947
6	43029679	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.428571
6	43029700	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.466667
6	43029725	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.9
6	43029726	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.8
6	43029755	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.5
6	43029800	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.277778
6	43029803	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.222222
6	43029809	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.666667
6	43029820	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.157895
6	43029840	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.625
6	43029855	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.121212
6	43029872	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.15625
6	43029881	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.117647
6	43029882	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0882353
6	43030457	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.368421
6	43030476	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.111111
6	43030496	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43030757	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.2
6	43030761	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.142857
6	43032999	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43033000	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.272727
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.222222
10	43438438	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.153846
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.272727
6	43616530	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.181818
6	43617507	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.3
2	44223084	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.181818
5	44815623	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.190476
5	44815669	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.52381
5	44815671	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0869565
5	44815675	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.25
5	44815737	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0833333
5	44816347	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.25
5	44816441	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.111111
7	44830948	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0280374
7	44831045	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44832684	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.037037
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.377358
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.152381
7	44832705	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0471698
7	44832731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0215054
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.411765
7	44832822	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.421053
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.130435
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.16129
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.12766
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.382979
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.240741
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0892857
7	44832893	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.118644
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.314815
7	44832912	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0769231
7	44832917	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0681818
7	44832918	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0465116
7	44833090	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0670732
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.15
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.122302
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0223881
7	44833145	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0359712
7	44833150	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0205479
7	44833222	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0283019
7	44833223	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.038835
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.234694
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0875
7	44833264	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0246914
7	44833280	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0235294
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.526316
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.116667
7	44833329	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.131579
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.255814
7	44833341	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0512821
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.851852
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.8
7	44833402	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0967742
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.4375
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.296296
7	44833460	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0444444
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.54
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0392157
7	44833578	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.271429
7	44833590	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0434783
7	44833615	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0520833
7	44833617	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0392157
7	44833623	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0504202
X	44883254	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44883260	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44883323	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	44883888	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.6
X	44893107	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.105263
X	44893116	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.176471
19	45006334	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
14	45207591	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.7
17	45217630	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.133333
17	45217631	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.5
17	45467226	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.7
17	45505605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	45505641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
17	45505642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
10	45993392	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.2
10	45993418	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.181818
11	47170114	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.142857
11	47368253	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.466667
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480912	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47480914	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47480924	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47481323	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
20	47510732	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	47510740	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.142857
11	47765936	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.1875
11	47765942	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.277778
11	47765958	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.111111
4	48141785	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.3
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.25
19	48458549	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.333333
19	48458590	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.230769
X	48580629	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.105263
19	48924150	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	48936547	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.181818
15	49034957	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.333333
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.727273
19	49602839	A->G	+	ENSG00000126464	PRR12	protein_coding	Intergenic	.	.	Alu	0.3
14	50193919	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.272727
14	50197821	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.153846
14	50197826	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.230769
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.307692
22	50539966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0227273
22	50539972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0266667
22	50539973	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0266667
22	50540019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.126437
17	51027229	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.266667
3	52415245	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.785714
3	52415252	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.181818
3	52415277	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.222222
3	52415296	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.133333
3	52415297	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.1875
3	52415314	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.153846
19	52700376	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	52700388	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
19	52700389	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
8	52706856	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	52706857	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.785714
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
3	53863947	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.4
3	53863971	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.409091
3	53863987	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.15
3	53864011	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.318182
3	53864280	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.142857
3	53866262	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
3	53866284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	53872610	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.1
19	53872624	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.1
2	53965396	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53965402	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.357143
2	53965403	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53965488	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53965489	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
19	54098308	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.25
19	54202950	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0769231
19	54202960	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.047619
19	54204108	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.15
19	54204125	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.130435
19	54204226	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0689655
19	54204465	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.235294
19	54216264	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.162162
19	54216266	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.147059
19	54237241	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0952381
19	54237247	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.608696
19	54238053	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.189189
19	54238063	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.111111
19	54238073	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0784314
19	54238088	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0416667
19	54238153	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.461538
19	54238162	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.275862
19	54238175	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.185185
19	54238202	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.147059
19	54238218	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.172414
19	54238232	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0666667
19	54238238	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.642857
X	54562102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54562110	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54562120	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	54562126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54562145	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54562146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.857143
X	54562172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54562175	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54562226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
X	54562229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54562243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347826
X	54562252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54562255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
X	54562268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
X	54562280	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
X	54562281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.515152
X	54562289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
X	54562308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.341463
X	54562329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.324324
X	54562654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0547945
X	54562672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.245902
X	54562678	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
X	54562686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
X	54562699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
X	54562705	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0652174
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.106383
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170213
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108108
X	54562801	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.457627
X	54563534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.303571
X	54563564	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
X	54563574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
X	54563583	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
X	54563593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.139535
X	54563594	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
X	54563600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
X	54563619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
X	54563622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
X	54563626	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
X	54563630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
X	54563633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.346154
X	54563634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
X	54563639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
X	54563679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
X	54563688	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54563765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0246914
X	54563774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0365854
X	54563813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
X	54564500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54564507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54564508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54564605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54564617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.419355
X	54564814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	54564820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
X	54564833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	54564834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.282609
X	54564838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
X	54564863	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
X	54564864	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
X	54564875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
X	54564914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
X	54564944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
X	54564971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	54564972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.233333
X	54564978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.310345
X	54564982	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54565573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
X	54566807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54566813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54566874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54566886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54568814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
14	55058757	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.181818
14	55061075	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55278711	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.210526
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.315789
14	55278752	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.12
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.12
14	55278859	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.727273
14	55279113	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.16
14	55279128	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0740741
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.148148
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.375
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.235294
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.235294
14	55281120	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.277778
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.52381
14	55281193	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55281219	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.4
14	55285159	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55290272	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
8	55889149	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.075
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55890005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0487805
8	55890076	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0689655
8	55890218	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55890802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.583333
8	55890840	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.307692
8	55890857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55890867	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.37037
8	55891167	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55891177	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.258065
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.848485
8	55891241	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.323529
8	55891273	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55895557	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.129032
8	55895561	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.1
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55896211	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0540541
8	55896219	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0487805
8	55896257	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0540541
8	55896818	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55896819	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55905363	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55906486	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0487805
8	55906537	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.513514
8	55906540	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.205882
8	55916927	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55916967	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55916976	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55917001	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55917030	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55917034	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55917056	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55917057	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.380952
8	55917098	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55917131	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55917279	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55917311	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.217391
8	55917325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55917333	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.478261
8	55917357	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55917384	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.294118
8	56072430	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.181818
18	56612139	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.2
18	56612140	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.2
12	56730446	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.166667
12	56730464	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.133333
12	56730532	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.5
12	56730573	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.25
12	56730574	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.166667
12	56730641	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.388889
12	56730642	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.222222
12	56730651	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.588235
12	56730765	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.272727
12	56730775	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.545455
12	56730777	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.454545
12	56731292	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.105263
12	56731348	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.3
12	56731351	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4
12	56731355	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4
12	56731436	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.133333
12	56731460	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.307692
12	56731462	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.142857
12	56731463	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4
18	57738360	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.416667
18	57738368	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.333333
18	57738369	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.416667
19	57866820	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57866891	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
17	58274599	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.4
17	59203244	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0645161
17	59203250	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0606061
17	59203256	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0666667
17	59203366	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.176471
17	59203380	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.111111
17	59203390	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.25
17	59203391	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.25
17	59203405	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.157895
17	59203408	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.647059
17	59203409	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.764706
17	59203410	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.352941
17	59203459	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.1875
17	59204907	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.0208333
15	59676461	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.133333
14	60256327	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.333333
14	60256382	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.25
14	60272589	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	60904281	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.428571
2	61503051	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61527957	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
14	61743171	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.166667
14	61743333	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.277778
14	61743345	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.2
11	61798268	A->G	-	ENSG00000134824	FADS2	protein_coding	Intergenic	.	.	Alu	0.3
12	62333544	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.125
1	62449049	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.352941
1	62449064	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.2
1	62449081	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	62449761	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	62449765	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.6
18	62532890	A->G	+	ENSG00000141664	ZCCHC2	protein_coding	Intergenic	.	.	Alu	0.2
17	62590664	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62590718	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62590731	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.416667
11	62822171	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.272727
11	62841013	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.225806
10	63250151	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63250200	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.25
10	63250244	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.266667
10	63250245	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63250267	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.333333
10	63250276	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.153846
15	63545701	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.4
15	63545708	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.2
15	63545714	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63545762	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63545793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63545850	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.285714
15	63546807	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63546870	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63546882	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.16129
15	63693346	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63693408	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
2	64139341	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.105263
15	64359592	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.125
15	64359856	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.461538
15	64361405	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.08
15	64361417	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	64361433	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	64361447	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64361463	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64361499	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64361594	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.105263
15	64361599	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64361634	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.1
15	64361646	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.529412
15	64363227	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.4
15	64363228	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.4
12	64463312	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.4
17	64472305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64472345	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	64940930	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.3
2	65127475	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.230769
2	65127604	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3
2	65127626	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65746547	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
11	65772932	A->G	-	.	.	.	Intergenic	.	.	Alu	0.708333
11	65772933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.75
11	65772989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121212
11	65774466	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0227273
11	65774508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
11	65774509	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0258621
11	65774544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
11	65774549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
11	65774587	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
11	65774588	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0384615
11	65774589	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0533333
11	65774688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.034965
11	65774690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0291971
15	65774937	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.454545
7	65981343	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.153846
7	66157947	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.4
12	66193998	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0540541
12	66194002	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.175
12	66194007	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.205882
12	66194058	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0689655
12	66202516	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.115385
12	66202517	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.103448
12	66202707	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	66202776	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	66629807	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66635643	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3125
11	66635780	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66635781	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66649517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66741883	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66742740	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.333333
7	66742741	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66742791	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66742792	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66742881	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66743146	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.285714
7	66743147	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66743148	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66743157	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66743192	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66743196	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.75
7	66743213	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.230769
7	66744938	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
1	66936359	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.153846
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.545455
1	66941722	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
17	67354862	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3
17	67355229	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	67355230	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
15	68059524	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	68059643	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.272727
15	68059840	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.111111
12	68829551	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.307692
2	69928785	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.16129
2	69928790	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.241379
2	69928803	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0740741
12	70283374	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.166667
12	70283401	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.125
12	70283447	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.307692
14	70924055	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.166667
14	70924066	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.363636
14	70924069	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.166667
14	70924098	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.166667
X	71056186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	71056279	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	71057739	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.111111
12	71658426	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	71658468	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.125
12	71658508	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.277778
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.25
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
3	71776456	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.133333
12	71850777	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71850780	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
3	72416166	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.235294
3	72416750	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.181818
15	72505916	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.176471
7	72995649	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	72995654	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	72995656	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	72995704	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	73154538	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.037037
9	73154539	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0722892
9	73154677	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0535714
9	73157534	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.125
7	73461839	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.5
7	73461844	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.333333
7	73461845	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.133333
7	73461860	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.294118
7	73461963	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.26087
7	73462018	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.117647
7	73462034	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.333333
7	73462039	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.4
6	73513847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
6	73513848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
6	73513849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
6	73514451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
6	73514497	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
6	73514875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
10	73776315	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.142857
10	73776895	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.705882
10	73776941	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.272727
10	73777632	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.631579
10	73777649	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.210526
10	73777654	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.238095
10	73777655	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.142857
10	73777694	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.208333
10	73777939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.153846
10	73778138	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.529412
11	73871173	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	73871175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
8	73873630	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.2
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.307692
10	74204811	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	74709911	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	74845663	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.272727
10	74845670	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.272727
7	74880916	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
7	74880917	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
7	74880931	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	75104591	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0666667
10	75692091	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
4	75916865	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0298507
4	75916882	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.021978
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.112903
4	75916918	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.109375
9	76461678	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	76461769	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.115385
9	76461795	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.137931
18	76809167	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.0555556
12	76829197	A->G	+	ENSG00000186908	ZDHHC17	protein_coding	Intergenic	.	.	Alu	0.3
11	78389502	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78389515	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.3
17	78754460	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.25
15	78888232	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.3125
15	78888310	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	78888311	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.103448
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
15	78898313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
15	78898323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
15	78898337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
15	78898411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
15	78898420	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
15	78898431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.171429
15	78898448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
15	78898489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.268293
15	78899273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
15	78899321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
15	78899362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
15	78899416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.268293
15	78899517	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0576923
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.025
16	81029827	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.454545
16	81030699	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.230769
16	81030731	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.153846
17	81856820	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
9	85544533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
6	85633747	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0909091
6	85633760	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.142857
6	85633872	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.103448
6	85633895	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.178571
6	85633903	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.125
9	85672872	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.272727
4	86923290	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intergenic	.	.	Alu	0.333333
4	87072201	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.7
4	87072591	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	88602748	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.666667
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
1	89643293	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.307692
16	89887133	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.4
15	90082826	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
15	90082856	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
15	90082885	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
7	90626707	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
9	91292443	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.333333
9	91292452	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.105263
9	91292473	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.0909091
9	91292506	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.0952381
9	91294315	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.117647
15	92889208	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.2
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1875
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0697674
15	92890816	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0612245
15	92890828	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	92893938	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	92894069	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.470588
15	92908998	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.105263
10	94607775	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.176471
10	94607867	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.307692
10	96702416	A->G	-	ENSG00000155629	PIK3AP1	protein_coding	Intergenic	.	.	Alu	0.181818
10	96702417	A->G	-	ENSG00000155629	PIK3AP1	protein_coding	Intergenic	.	.	Alu	0.272727
10	97375860	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.333333
10	97375912	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97376027	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
8	97729031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	97729059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	97729188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.146667
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.346667
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.175824
8	97729686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
8	97729726	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0232558
8	97729727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0595238
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.13253
8	97729752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
8	97729765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0721649
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.5
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.45
12	98596782	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.461538
12	98596830	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.181818
12	98596874	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.285714
12	98597476	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.173913
13	99318237	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.846154
13	99318245	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.230769
13	99318297	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	1
13	99318309	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.3
6	99405662	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.3
6	99405719	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.4
7	99494873	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.166667
7	99496615	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.142857
7	99497339	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.181818
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.636364
7	99497452	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.384615
12	100035682	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.230769
8	100713684	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	100716315	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.24
8	100716318	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.191489
2	101274883	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.037037
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.152542
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.189655
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0847458
2	101274947	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0294118
2	101275013	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0294118
2	101275059	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0666667
2	101275062	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0930233
2	101275066	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.121951
2	101275090	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	101275214	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.133333
2	101275229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0869565
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.12766
2	101275285	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0454545
2	101288358	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
10	101789867	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101789903	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.363636
10	101789938	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.5
10	101789940	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.416667
10	101789945	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.615385
12	101827854	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.117647
12	101827910	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101827915	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
14	102347955	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.545455
4	102558720	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.352941
10	103143868	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103170800	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103177594	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.26087
10	103177600	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.304348
10	103178379	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103179219	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.285714
10	103179226	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.384615
10	103179589	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	103180475	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.129032
12	104480366	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104686031	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104686036	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.214286
7	104945840	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.25
7	104946021	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0869565
7	105023250	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105023334	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105023525	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105023574	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105023611	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
6	108600360	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.181818
6	108600427	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.3
6	108600479	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.25
6	108600497	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.166667
1	109063527	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.192982
1	109063534	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.302326
1	109063609	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0666667
1	109063610	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.104167
1	109063612	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.04
1	109063614	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0408163
1	109063617	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0588235
1	109063618	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0943396
1	109063621	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0576923
1	109063714	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0877193
1	109063715	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0701754
9	110245943	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.214286
9	110246029	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.4
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.3
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.318182
6	110897725	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.131579
13	110898665	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0444444
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.105263
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0555556
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.282609
13	110900007	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0465116
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.162791
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.305556
10	110924812	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.142857
10	110924911	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.25
10	110924912	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.3
10	110924921	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.181818
10	110924977	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1875
9	112386727	A->G	+	ENSG00000119471	HSDL2	protein_coding	Intergenic	.	.	Alu	0.6
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.363636
1	112663996	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
9	113293518	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	113293540	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	113293707	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	113293708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	113293725	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
2	113709950	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.208333
2	113709956	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.296296
2	113709979	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.173913
2	113709980	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.173913
1	113748672	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.2
2	113949116	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.142857
2	113949123	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.181818
2	113949213	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.2
12	116254674	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.230769
12	116254675	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116254680	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.307692
12	116254742	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.307692
7	116888795	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.2
11	117063763	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117070849	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117071875	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	117076052	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117077097	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	117077099	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.190476
11	117085183	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117085184	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.388889
11	117085264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.173913
11	117085345	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1875
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.538462
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.428571
12	118356503	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	118356707	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	118365335	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.25
12	118365349	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.363636
12	122512078	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	122513946	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0392157
8	123033138	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.4
12	123434302	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	123434306	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.125
11	126346967	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.4375
11	126346970	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.388889
11	126347002	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.333333
3	126458374	A->G	-	ENSG00000070476	ZXDC	protein_coding	Intergenic	.	.	Alu	0.181818
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
9	127791033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.243902
9	127791046	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
9	127791048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	127791060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127791922	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	127791926	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	127792385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
9	127792406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127792418	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127793178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127793179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127795475	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.2
7	128661370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
7	128661371	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
8	129910746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.307692
8	129910885	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
8	130001735	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130002349	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
9	130704983	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130705018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	130705038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
9	130705064	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	130705073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	130705092	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
9	130705134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705173	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
9	130705267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
9	130705268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	130705284	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	130705643	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705653	A->G	+	.	.	.	Intergenic	.	.	Alu	0.7
9	130705756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
9	130705771	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
9	130705774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130705832	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
9	130705833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	130705834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.296296
9	130705846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
9	130705997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	130705998	A->G	+	.	.	.	Intergenic	.	.	Alu	0.769231
9	130706148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
9	130706158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130706811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130706820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
7	130957856	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.125
7	130957978	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.15
2	131091886	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.136364
5	131766165	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.363636
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.3
5	132918505	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132918507	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.454545
5	132942899	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.307692
5	134380016	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.105263
5	134381507	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	134905519	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0731707
9	134905551	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
9	134905569	A->G	-	.	.	.	Intergenic	.	.	Alu	0.161765
9	134905624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.228571
9	134905679	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
9	134905713	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
5	134961970	A->G	+	ENSG00000132570	PCBD2	protein_coding	Intergenic	.	.	Alu	0.105263
5	134962221	A->G	+	ENSG00000132570	PCBD2	protein_coding	Intergenic	.	.	Alu	0.117647
3	136331376	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.2
3	136331983	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.857143
6	136786272	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.103093
6	136786300	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.118421
6	136786304	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.109589
6	136786320	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.125
6	136786335	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0461538
X	136877553	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.2
X	136877559	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.3
5	138364153	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.181818
5	138524444	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.181818
5	138524458	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138573296	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.333333
3	138643683	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
4	139046043	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139046837	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.171429
4	139047243	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0816327
4	139047244	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139047249	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0888889
4	139047299	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.105263
4	139047312	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
4	139047313	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.411765
4	139047323	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139047352	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139047378	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1875
4	139047402	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.25
4	139047420	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.25
4	139047489	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.184211
7	139080522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.16129
4	139170467	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.125
5	139284528	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.125
5	139284535	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.538462
5	139284536	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	1
5	139284540	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.133333
5	139349740	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139349793	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.25
7	139378475	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139378480	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139396406	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.272727
7	139396426	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139418854	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.05
7	139418898	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0727273
7	140897659	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.363636
7	140897662	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
5	143048335	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.181818
2	143272443	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.3
2	143272444	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.7
6	144165375	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.3
8	144292777	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.0851064
8	144292847	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.0425532
7	148811218	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148869484	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.166667
7	148869632	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.272727
1	150309015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	150309561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	150309562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.285714
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0454545
1	150612623	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.130841
1	150612688	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.137931
1	150613023	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0714286
1	150613024	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0512821
1	150613029	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.105263
1	150613030	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.131579
1	150613114	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0588235
1	150613178	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0526316
5	150756153	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.181818
1	150993446	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.272727
1	150993449	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.166667
1	150993477	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	151271819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
5	151271828	A->G	+	.	.	.	Intergenic	.	.	Alu	0.134615
5	151271889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
5	151271929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
5	151271933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
5	151271955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
5	151271956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
5	151271961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0652174
5	151271965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12766
5	151271988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.155172
5	151271996	A->G	+	.	.	.	Intergenic	.	.	Alu	0.109589
3	152329502	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	152329528	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.115385
7	152405347	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.454545
1	155681529	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	155681537	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.266667
1	155681555	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	156469395	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.307692
7	157232459	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.153846
7	157232626	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.142857
7	157372998	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.148148
7	157373496	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0571429
7	157373926	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.2
7	157373953	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.1875
5	157830961	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.25
5	157830968	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.181818
5	157830982	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.307692
5	157830987	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1875
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.15
7	158789459	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.105263
7	158799603	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159734197	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.214286
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.777778
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.210526
3	169973406	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.142857
3	169973407	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.133333
5	171409898	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.333333
5	171409907	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.214286
1	171499706	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.416667
1	171499754	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
3	172053692	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
4	173331105	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
1	173858683	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
1	173858689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	173859701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
1	173859719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
1	173859748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
1	173859762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
1	173859774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
1	173859897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
2	173931621	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.272727
2	173932329	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	173932472	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.317073
2	173932482	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.170732
2	178434190	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.466667
2	178434191	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.571429
2	178434492	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.333333
2	178434564	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0769231
2	178435110	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.272727
2	178435123	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.166667
2	178435129	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435156	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.153846
2	178435236	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.333333
2	178435262	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.3
2	178435286	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.214286
2	178435289	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435303	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.416667
2	178435304	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.416667
2	178435308	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.571429
2	178435335	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.2
2	178435343	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.133333
5	179829987	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.2
5	179830041	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.125
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
4	184781112	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.3
4	184781676	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0810811
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.228571
4	184781705	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0769231
4	184781747	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	184799254	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	184799389	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.285714
2	190886687	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.153846
3	193629606	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.272727
3	195417731	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.4
3	195527338	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.454545
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.16
2	196162715	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0740741
3	196906073	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.272727
3	196906099	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.333333
3	196906109	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.454545
3	197612712	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
2	200855388	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.115385
2	200855397	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.142857
2	200855440	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	200856342	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.428571
2	200856343	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.230769
2	200856393	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	203298303	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	203298411	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203298478	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203298502	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203298766	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.428571
2	203298797	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203298824	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203298848	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.136364
2	203298863	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.210526
2	203298914	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.307692
2	203298924	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.538462
2	203298941	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203298956	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.363636
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.615385
2	203300839	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203303233	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.583333
2	203303234	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303279	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.318182
2	203303285	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	203303321	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.653846
2	203303330	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.269231
2	203303440	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.238095
2	203303441	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.291667
2	203303509	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.35
2	203303510	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.6
2	203303520	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.238095
2	203303525	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.15
2	203303535	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303705	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203303729	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.740741
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.275862
2	203303796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303797	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.157895
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303956	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.571429
2	203303958	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303964	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203303965	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.357143
2	203304241	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203304259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.928571
2	203304275	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.692308
2	203304298	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203304458	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.789474
2	203304459	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.684211
2	203304471	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203304480	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203304680	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.130435
2	203304681	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.173913
2	203304885	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203304891	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203305382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203305385	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203305391	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203305399	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.384615
2	203305411	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203305438	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.259259
2	203305439	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203305443	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203305447	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.347826
2	216208180	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	216208192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	224411830	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.214286
1	226000698	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
2	227539234	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.3
2	227539541	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.208333
2	227539610	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.263158
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.285714
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	227539891	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.615385
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.565217
2	227539936	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.272727
2	227540016	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.285714
2	227540019	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.285714
2	227540021	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.142857
2	227540070	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.153846
2	233071214	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.4
1	235306314	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.416667
1	235826738	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.547619
1	235826820	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.6875
1	235826849	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.111111
1	235826852	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0512821
1	235826871	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.121212
1	235826896	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0392157
1	235826899	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.12963
1	235826915	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0769231
1	235826956	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.297297
1	235826959	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0555556
1	235826962	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0967742
1	235826964	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.172414
1	235827159	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.282609
1	235827161	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.829268
1	235827172	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.09375
1	235827192	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.130435
1	235827195	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.6
1	235827198	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0869565
1	235827245	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.869565
1	235827247	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.541667
1	235827269	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.318182
1	235827286	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.130435
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.533333
2	237707326	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.111111
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.590909
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.416667
2	237707437	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	9936698	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.130435
2	9936699	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.26087
2	9936711	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.148148
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.588235
19	11449919	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0689655
19	11449925	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0350877
19	11449931	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0847458
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.173077
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.56
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.333333
19	11449962	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.142857
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0740741
18	12031708	A->G	+	ENSG00000267480	AP001542.3	antisense	Intron	.	.	Alu	0.5
18	12031768	A->G	+	ENSG00000267480	AP001542.3	antisense	Intron	.	.	Alu	0.230769
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0614035
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.669231
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.355556
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.105263
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.472727
3	14944631	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0722892
3	14944656	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.020979
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.240506
3	14944910	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.048
3	14944940	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.12069
3	14944945	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0446429
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.153846
3	14944964	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0344828
9	15505118	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.416667
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.416667
1	20649499	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.533333
1	20649508	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.166667
1	20649520	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.166667
1	20649530	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.8
1	20649602	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.272727
1	20649641	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.142857
6	28123199	A->G	-	ENSG00000269293	ZSCAN16-AS1	antisense	Intron	.	.	Alu	0.0251572
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0264901
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0458015
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0344828
10	28523223	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0634921
10	28523667	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0925926
10	28523689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0983607
10	28523698	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.118644
10	28523750	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.031746
17	28721232	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.1
17	28722416	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.142857
17	28722429	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.266667
17	28722439	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.117647
17	30636334	A->G	+	ENSG00000250462	LRRC37BP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.222222
17	30636341	A->G	+	ENSG00000250462	LRRC37BP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.315789
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.25
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.130435
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.1875
16	31123747	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0909091
16	31123759	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0714286
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.27027
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.459459
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.264706
16	31183140	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.148148
16	31183189	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.181818
20	35713269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.423077
20	35713270	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.0833333
19	36577150	A->G	+	ENSG00000186020	ZNF529	protein_coding	Intron	.	.	Alu	0.08
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.4
19	39491565	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.142857
19	39491588	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.285714
19	39491591	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.266667
19	39491616	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.142857
19	39491619	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.125
19	39491621	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.1875
19	39491636	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.15
19	39491689	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.473684
19	39491701	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.473684
19	39491748	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.4
15	41298641	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0254777
15	41298662	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.020979
15	41298663	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.048951
15	41298740	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0460526
15	41298745	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0201342
15	41298764	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0704225
15	41298774	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0214286
15	41298775	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0935252
15	41298780	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.112782
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
15	41298791	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.023622
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0487805
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0721649
15	41298816	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0309278
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.190476
15	41298855	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0458015
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.885714
15	41299199	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0707965
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.235714
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.191489
15	41299237	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0405405
15	41299245	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.059322
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.276119
15	41299259	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0252101
15	41301136	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0298507
15	41301154	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0377358
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.113636
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0892857
15	41302308	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0566038
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0923077
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.04
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0540541
15	41302374	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0222222
15	41302387	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0519481
15	41302413	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0652174
15	41302414	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0537634
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0434783
15	41305278	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.04
15	41305287	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0566038
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.113208
15	41305335	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0555556
15	41305345	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.08
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0727273
15	41305376	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0461538
15	41305405	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0454545
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.392405
15	41305458	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0609756
15	41305459	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.060241
15	41305473	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0652174
15	41308778	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.15
15	41308838	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.266667
15	41308896	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.181818
6	42941571	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0740741
6	42941579	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.222222
6	42941602	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.178571
5	43574918	A->G	-	ENSG00000248092	NNT-AS1	antisense	Intron	.	.	Alu	0.1875
17	44176174	A->G	-	ENSG00000161664	ASB16	protein_coding	Intron	.	.	Alu	0.0909091
17	44223133	A->G	+	ENSG00000260793	AC003102.1	antisense	Intron	.	.	Alu	0.25
17	47082141	A->G	-	ENSG00000262879	AC068152.1	processed_transcript	Intron	.	.	Alu	0.0952381
17	47082257	A->G	-	ENSG00000262879	AC068152.1	processed_transcript	Intron	.	.	Alu	0.0540541
17	47082297	A->G	-	ENSG00000262879	AC068152.1	processed_transcript	Intron	.	.	Alu	0.0555556
19	48256386	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0714286
19	48256394	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0917431
19	48256515	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0888889
19	48257484	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0851064
19	48257575	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0833333
19	48257617	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0666667
19	48257681	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.25
19	48257738	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.2
14	55285230	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.111111
18	57641575	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.0465116
18	57641592	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.0952381
18	57641594	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.0930233
18	57641639	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.08
18	57641741	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.333333
18	57641797	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.142857
18	57641809	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.114286
14	58295680	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0327869
14	58295740	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0519481
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0428571
19	58582552	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.15
19	58582577	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.103448
19	58582609	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0909091
19	58582630	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.140351
19	58582631	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.196429
19	58582632	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.103448
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.266667
19	58584089	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.241379
19	58584102	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.586207
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.473684
19	58584165	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0882353
19	58584199	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0731707
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.243243
2	61142102	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.2
2	61142794	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.105263
2	61142809	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.25
11	65180254	A->G	-	ENSG00000254614	AP003068.2	antisense	Intron	.	.	Alu	0.142857
11	65180259	A->G	-	ENSG00000254614	AP003068.2	antisense	Intron	.	.	Alu	0.153846
11	65439419	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0255102
11	65440001	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0466321
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.097561
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.387978
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.371257
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0496894
11	65441399	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0494505
11	65441403	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0898204
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.142857
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.1125
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.220126
11	65441448	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0559006
11	65442678	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.410959
10	73778867	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.148148
10	73778937	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.153846
10	73779402	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.166667
10	73779403	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.181818
X	73947010	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.106383
X	73947071	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.111111
X	73947127	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0588235
15	74026895	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.1875
15	74027510	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.285714
15	74466041	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.166667
15	74481178	A->G	+	ENSG00000260103	AC012435.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.111111
5	78359568	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.111111
5	78359569	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.222222
16	81030790	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.181818
16	81030834	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.2
16	81030835	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.4
11	93734814	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0740741
11	93734995	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0487805
11	93735426	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.416667
11	93735505	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.166667
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.333333
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.2
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.4
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.176471
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.461538
8	98044059	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.181818
8	98044071	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.166667
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.384615
12	98597599	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0833333
12	98597604	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.08
12	98597658	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.269231
12	98597662	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.32
12	98597676	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.444444
12	100033607	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.384615
12	100033614	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.166667
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.322581
10	112449507	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0606061
10	112449534	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.115385
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.285714
10	112449594	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.153846
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.25
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0857143
10	112449964	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0540541
10	112449969	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.162162
10	112449999	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.121212
10	112450004	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0645161
10	112450010	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.137931
10	112450154	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.151515
11	117159811	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.181818
7	128529007	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.25
9	129504148	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.214286
9	129506080	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.157895
9	129506678	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.181818
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.454545
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.230769
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.35
9	129506770	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.2
9	129506786	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.115385
10	133301987	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intron	.	.	Alu	0.2
5	139282849	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.909091
8	144974885	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.153846
4	151103660	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0555556
4	151103663	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.176471
7	155004523	A->G	+	ENSG00000273344	PAXIP1-AS1	lincRNA	Intron	.	.	Alu	0.125
1	167641535	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0571429
1	167641598	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.08
2	218256306	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.238095
1	225786970	A->G	+	ENSG00000143742	SRP9	protein_coding	Intron	.	.	Alu	0.0740741
X	299636	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.307692
X	299642	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	299646	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	299678	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.421053
X	299733	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	299806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.3
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	300140	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	301074	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	301231	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	301412	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	301888	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	302450	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	1
X	302700	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	302703	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.04
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0642458
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0491803
17	516452	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.277778
17	517657	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	517658	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	517794	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	769388	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.176471
11	769403	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.3125
11	769418	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	769426	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	769453	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
11	769459	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	769485	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	769489	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	769494	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	1563352	A->G	-	ENSG00000160075	SSU72	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	1570026	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	1572929	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	1572938	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	1572943	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	1573731	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.296296
1	1663523	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	1663536	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	1663538	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.26
1	1663567	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.375
1	1663586	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.170732
1	1663592	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	1663609	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.159091
1	1663635	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.148936
1	1663638	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0754717
1	1663698	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0851064
1	1663741	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0677966
1	1664099	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	1664147	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.619048
17	1780760	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	1780786	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	1799241	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	1925197	A->G	+	ENSG00000227500	SCAMP4	protein_coding	three_prime_utr	.	.	Alu	0.0444444
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	2418382	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2487523	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.130435
4	2839954	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	2839964	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	2839971	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	2840110	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.3
4	2840114	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	2840118	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.583333
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.171429
X	2906205	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.184211
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.519481
X	2906259	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.024
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.248
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.792
X	2906302	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.197183
X	2906312	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	2906313	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.294521
X	2906314	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0758621
X	2906316	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0428571
X	2906319	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0265487
X	2906325	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0849057
X	2906336	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.145631
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.511111
X	2906392	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.871795
X	2906393	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.942308
X	2906414	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0810811
X	2906415	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.13986
X	2906421	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.176
X	2906433	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.138889
X	2906847	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0609756
X	2906865	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.148387
X	2906866	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0394737
X	2906875	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.681481
X	2906892	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0983607
X	2906893	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0234375
X	2906927	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.171171
X	2906938	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	2906942	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.188889
X	2906944	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.959184
X	2906947	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.913462
X	2906995	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0365854
X	2907017	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0442478
X	2907034	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.776699
X	2907035	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.553398
X	2907078	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.882353
X	2907083	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.940594
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.836364
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	2938372	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.122807
4	2938396	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0294118
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.131148
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.339286
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.122807
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.468085
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.25
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.208333
4	2938634	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.736842
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.486486
4	2938673	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0810811
4	2938686	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.195652
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0851064
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.103448
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.69863
4	2938740	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.030303
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.109375
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.2
4	2938759	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0535714
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.185185
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	3808760	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.1
17	3808792	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	3813836	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.928571
20	3824811	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
20	3824812	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.05
20	3867431	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	3867511	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3867516	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3867521	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3867531	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	3867545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.148148
20	3867567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.138889
20	3867578	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.289474
20	3869447	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	3869544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	3869554	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3869566	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3869722	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.615385
20	3869744	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.705882
20	3869746	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3869785	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0967742
20	3869788	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.241379
20	3869814	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	3869840	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3869848	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0882353
20	3869866	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.212121
20	3869867	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.242424
20	3869878	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.294118
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.314286
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.969697
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3870574	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.178571
20	3870586	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3870590	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.277778
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.411765
20	3870985	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.294118
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3871046	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3871064	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
20	3871090	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0967742
20	3871115	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3871116	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.12
20	3871143	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	3871144	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.211538
20	3872178	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0857143
20	3872182	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.216216
20	3872184	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.162162
20	3872185	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.108108
20	3872207	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	3872211	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.179487
20	3872214	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	3872254	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3872273	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
20	3872276	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.107143
20	3872277	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
20	3872280	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.12
20	3872327	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3872331	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3872353	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	3872358	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.175
20	3872363	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.119048
20	3872377	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0789474
20	3872413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.175
20	3872420	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.121212
20	3873277	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
20	3873309	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.131579
20	3873320	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	3873333	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0588235
20	3873348	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0512821
20	3873373	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	3873387	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0967742
20	3873413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.185185
20	3873448	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	3873459	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	3873516	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.16129
20	3875197	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0888889
20	3875200	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0652174
20	3875295	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.05
20	3875359	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0444444
20	3928501	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.137931
20	3928568	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.444444
20	3928593	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.235294
20	3928884	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.241379
20	3928931	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.416667
20	3928934	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.26087
20	3928945	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3928946	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3928960	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.277778
20	3928986	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3929016	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3929018	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	3929019	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.08
20	3929020	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	3929026	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3929027	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3929051	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
20	3929066	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	3929073	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.185185
20	3929233	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3929269	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.04
20	3929280	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
20	3929282	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.12
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3929347	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.047619
20	3929377	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.372093
20	3929388	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.595238
20	3929390	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.139535
19	4653127	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	4653128	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	4653593	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	4653604	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	4653616	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.52381
19	4653862	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	4654456	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.9
19	4654525	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	4654532	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4654539	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4654542	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4654551	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.08
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	4654589	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.225806
19	5909573	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	5909580	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	6222340	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	6222341	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	6223184	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	6223200	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	6379671	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	6379672	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	6522161	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	6522287	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	6522293	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	6522498	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	6523323	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	6523335	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0851064
8	6643321	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	6643351	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	6643364	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	6643404	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	6643430	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.615385
8	6643445	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	6643485	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	6644031	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	6644036	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	8269931	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0487805
17	8269978	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0408163
17	8269981	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.145833
17	8269982	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
17	8270007	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	8270058	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0925926
17	8270061	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.037037
17	8270075	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0576923
17	8270087	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.030303
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.258065
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.145833
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.176471
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.078125
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.045977
11	8686405	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0674157
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0322581
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.6
11	8687242	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.15
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.277778
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.666667
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.3125
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.307692
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.538462
16	9104214	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.04
16	9106151	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.025974
16	9106176	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.025
16	9106210	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0365854
16	9106454	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0218978
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.330579
16	9106547	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0471698
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.401869
16	9108458	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0223464
16	9110782	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	9110783	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0574713
16	9110887	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0422535
16	9110888	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0597015
16	9110891	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0677966
16	9110931	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0517241
16	9110970	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0352941
16	9110979	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0215054
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.046729
1	9265729	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.046875
1	9266895	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0816327
1	9266898	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	9266901	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9266938	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	9267009	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	9267029	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	9267049	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0545455
1	9267054	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0545455
1	9267081	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0684932
1	9267987	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	9267988	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	9268010	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	9268015	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	9268023	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.16
1	9268036	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9268043	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	9268044	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	9268047	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9268061	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	9268141	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	9268154	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.25641
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.675676
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.540541
1	9268196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.101695
1	9271022	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0615385
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.278481
1	9271041	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.382716
1	9271071	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0266667
1	9271117	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	9271134	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	9271168	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.127907
1	9271195	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.126582
1	9271196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0506329
19	9561756	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	9563675	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	9583049	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.3
1	9584815	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9584969	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.25
19	9648482	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	9648491	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.125
11	9750221	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	10101586	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	10150912	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0649351
3	10150918	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0253165
3	10150924	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.658537
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.16129
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.303371
3	10150968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0430108
3	10150973	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.03
3	10150974	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.039604
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0701754
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	10151022	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0677966
3	10151033	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	10151063	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	10151069	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.555556
3	10151100	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	10151143	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	10151809	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.027027
3	10151810	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0519481
3	10151827	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.1
3	10151831	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0277778
3	10151836	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0547945
3	10151837	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0266667
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	10151922	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0247934
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	10151981	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0363636
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.125
3	10152182	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.478261
3	10152190	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.24
1	10457219	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	10457243	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10457257	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10457295	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	10457323	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10457324	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	10457326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457346	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10457428	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	10457615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10457652	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10457941	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0980392
1	10457955	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0545455
1	10457963	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.06
1	10457988	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0289855
1	10457993	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0298507
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0735294
1	10458699	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	10458716	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	10458740	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10458764	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.15
1	10458774	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10458991	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10459007	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10459062	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10459831	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	10459925	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	10459988	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460000	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10460010	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.6
1	10460162	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460321	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.818182
1	10460430	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	10460592	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460626	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10460678	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	10460707	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460708	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10460762	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460800	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10461113	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	10461180	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	10924485	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	10926621	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.2
16	10926721	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	10926724	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	10926738	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.0517241
16	10931258	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	10931634	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.162791
19	11146006	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.056338
19	11146011	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0246914
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.170732
19	11146021	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0215054
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.27381
19	11146509	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11146584	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	11146832	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11146833	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.104167
19	11146958	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.1
19	11146968	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	11146997	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	11147028	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	11147041	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	11449574	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.663043
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0537634
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0989011
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0322581
19	11449715	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.045045
19	11449797	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0232558
19	11450478	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	11834868	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.227273
16	11834869	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11834919	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	11834956	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.12
16	11834963	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.08
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.48
16	11834994	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	11835011	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	11835016	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	11835030	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835067	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.545455
16	11835249	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	11835293	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.541667
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	11835350	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.138889
16	11835395	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	11835590	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0567376
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.189781
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.11194
8	11842720	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0285714
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.411765
8	11842726	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0350877
8	11842733	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0336134
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.15
8	11842745	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.036036
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.150442
8	11842765	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0294118
8	11842774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0449438
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.123596
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.126437
8	11842801	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0238095
8	11842806	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0215054
8	11842809	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	11842811	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0309278
8	11842812	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0816327
8	11842813	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0520833
8	11842814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0210526
8	11842815	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0967742
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.150685
8	11842854	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.173913
8	11842864	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0681818
8	11842879	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	11842887	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	11842904	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	11842909	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.538462
8	11842910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.692308
8	11843016	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0857143
8	11843038	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0338983
8	11843045	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	11843046	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0985915
8	11843064	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.039604
8	11843086	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0258621
8	11843087	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.121739
8	11843113	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.032967
8	11843122	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0204082
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.122222
8	11843143	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0681818
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.329545
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.193182
8	11843173	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0217391
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.318182
8	11843198	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0285714
8	11843219	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.121212
8	11843220	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0746269
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.25
8	11843774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.340426
8	11843786	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.543478
8	11843787	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.266667
8	11843796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	11843814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.52
8	11843827	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	11843828	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	11843834	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.457143
8	11843848	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.173913
8	11843875	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.030303
8	11843883	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0461538
8	11843896	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0886076
8	11843908	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0285714
8	11843910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0582524
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.266667
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.451327
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.041958
8	11843970	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0985915
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.104895
8	11843976	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	11843981	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.652632
8	11843995	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.114286
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.302752
8	11844007	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0294118
8	11844021	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0873016
8	11844027	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0979021
18	11883855	A->G	-	ENSG00000154889	MPPE1	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	12080887	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	12080929	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.125
10	12121033	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.151515
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.15625
10	12121127	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.210526
10	12122498	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	12660856	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	12661106	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.304348
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	12663342	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0921053
19	13772557	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	13772565	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	13772567	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.863636
19	13772573	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	13772574	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13772617	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	13772620	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	13772622	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	13772662	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	13772665	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	13773060	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	13773078	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.75
19	13773083	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773113	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	13773148	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773170	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	13773192	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	13773206	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	13773209	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.375
19	13773260	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	13773269	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.466667
19	13773270	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.8
19	13773282	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	13773376	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	13773445	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.407407
19	13773477	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	13773494	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	13773505	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	13773525	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	13773531	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	13773532	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.863636
19	13773594	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.866667
19	13773604	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.923077
19	13773605	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.692308
19	13773608	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	13773855	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.6
19	13773911	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.12
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.24
6	13787968	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	13788021	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	13790725	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	14498908	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.12
12	14498927	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	14499678	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	14734255	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	14734257	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.449275
19	14734269	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.150943
19	14734279	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	14734292	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0535714
19	14734293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	14734297	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	14734311	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.75
19	14734324	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.346154
19	14734349	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0655738
19	14734645	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	14734646	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.109589
19	14734651	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0810811
19	14734660	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.236111
19	14734664	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0724638
19	14734669	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.283582
19	14734699	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	14734700	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	14734702	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.830189
19	14734708	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	14734718	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0655738
3	15072148	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	15072386	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.615385
16	15409262	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.352941
3	15411030	A->G	-	ENSG00000206562	METTL6	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	15411031	A->G	-	ENSG00000206562	METTL6	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	15411047	A->G	-	ENSG00000206562	METTL6	protein_coding	three_prime_utr	.	.	Alu	0.75
1	15572892	A->G	-	ENSG00000116138	DNAJC16	protein_coding	three_prime_utr	.	.	Alu	0.2
16	15700116	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	15700166	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.122449
16	15700252	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	15700279	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
16	15700334	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.25641
4	15850251	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.025
4	15850254	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.025641
17	15986842	A->G	-	ENSG00000214941	ZSWIM7	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	16155720	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	16155721	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	16550675	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	16550680	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	16550728	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	16551892	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0925926
19	16552039	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	16552420	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.03125
19	16552431	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
19	16552534	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	16552622	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	16760962	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
X	16761044	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0547945
X	16761136	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	16761161	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	16763026	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.4375
X	16763032	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	16763033	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	16763127	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	16763492	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16764788	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16764930	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.146341
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.265152
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.132616
22	17110351	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0903427
22	17110367	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0564263
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.19195
22	17110383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.040404
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.191083
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.13245
22	17110647	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.112676
22	17110696	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.040724
22	17110742	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0338346
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.110727
22	17113329	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0886076
22	17113332	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.532468
22	17113334	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.128205
22	17113449	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.193237
22	17113458	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0483092
22	17113459	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.259434
7	17344729	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.150754
7	17344730	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.660147
7	17344734	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.100962
7	17344747	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0615836
7	17344769	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.142012
7	17344771	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.158824
7	17344795	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0684932
7	17344810	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0775862
7	17344813	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.527211
7	17344816	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.550336
7	17344817	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0204778
7	17344838	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0689655
7	17344890	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.579926
7	17344891	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.156716
7	17344903	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.316726
7	17345061	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.037037
7	17345062	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.235632
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.360825
7	17345131	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0306122
7	17345139	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0306122
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.340237
7	17345154	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0592992
7	17345155	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.117166
7	17345168	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.04
7	17345194	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.245902
7	17345208	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.26694
7	17345236	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0234542
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.21934
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.298077
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.233577
4	17626094	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17627355	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17627386	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	17703075	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	17703076	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.368421
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	17801244	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17801307	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17801308	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17801311	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17801353	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.578947
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.291667
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.851852
4	17801936	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.769231
4	17801939	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.470588
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	17801994	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.473684
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.6875
4	17803097	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0967742
4	17803162	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.15
4	17803176	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	17803229	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0967742
4	17803249	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	17803297	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.075
19	17825737	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0215054
19	17826379	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0701754
19	18070869	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.113636
22	18088505	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.1
22	18088511	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0967742
22	18088523	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0857143
22	18088572	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	18088577	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0967742
22	18088579	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.129032
22	18088593	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.114286
22	18088601	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0555556
22	18088602	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.314286
22	18088603	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.257143
22	18088636	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0416667
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.340909
22	18088665	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.122449
22	18088682	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0508475
22	18088691	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0307692
22	18088708	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.107143
22	18088711	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0517241
22	18089806	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.434783
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.655172
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.130435
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.382979
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.434783
22	18089976	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	18272862	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18364358	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18364412	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	18364413	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18364467	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18364493	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	18364535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	18364546	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18365396	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365472	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	18365482	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	18365484	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18365515	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	18365532	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18365605	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.148936
19	18365606	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.152174
19	18365618	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0943396
19	18366502	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18366519	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.928571
19	18366527	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.411765
19	18366535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	18366600	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366612	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	18366732	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	18366876	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	18366886	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.114286
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.147059
19	18366898	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.322581
19	18366899	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.46875
19	18366943	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.206897
19	18366951	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	18366971	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18366990	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	18366993	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	18367009	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.148148
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.586207
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	18368048	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	18368183	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18368296	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	18368318	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	18368319	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.190476
20	18487695	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.52381
20	18487707	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.368421
20	18487708	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.222222
20	18487735	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.1
20	18487828	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.130435
20	18487829	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	18487830	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.346154
20	18487868	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.130435
20	18487893	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.125
20	18488404	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.3
20	18488443	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.190476
20	18488493	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.1
20	18488498	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.15
20	18488533	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.125
20	18488538	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.352941
20	18488539	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	19215745	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	19215756	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	19215921	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	19216127	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19216137	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	19216185	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	19216191	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	19216199	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	19216753	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	19216788	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	19216855	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	19216859	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	19216862	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	19216879	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.1
1	19216962	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	19216963	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.387097
1	19216965	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.62069
1	19216971	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	19217291	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	19217303	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.35
1	19217330	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	19217356	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	19217385	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.35
1	19217401	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	19217405	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	19217470	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.08
1	19217479	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.375
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0757576
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	19259013	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0447761
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.377049
1	19259060	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	19260007	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.573333
1	19260025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0357143
1	19260026	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0813953
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.151515
1	19260047	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0348837
1	19329136	A->G	+	ENSG00000040487	PQLC2	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	19672219	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.619048
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.08
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.416667
13	19672406	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.1
13	19672418	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0967742
13	19672838	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.130435
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.535714
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.37931
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.32
13	19672976	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.45
13	19673001	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	19680684	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	19680702	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19681594	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	19681599	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	19681639	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	19681647	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	19681670	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	19681710	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	19682971	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	19682972	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	19683066	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	19683067	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	19792233	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.3
3	20170169	A->G	-	ENSG00000129810	SGO1	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	20284282	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.195122
10	20286764	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.25
10	20286781	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0793651
10	20286805	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.130435
10	20286825	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
10	20286842	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.227848
10	20286851	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.139241
10	20286854	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0617284
10	20286904	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.215909
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0905512
22	20890524	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0526316
22	20890612	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.037037
22	20890638	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	21119147	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	21119176	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.34375
19	21119212	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	21119217	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21119232	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.35
19	21119242	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21119256	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	21119296	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	21119317	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21119323	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21120135	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21120141	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21120142	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21120146	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21120287	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	21184185	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	21184188	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21184194	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	21184229	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.1
19	21184265	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21184291	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	21184295	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21184299	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	21184300	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	21185530	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	21185538	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.5
19	21291602	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.216867
13	21374321	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0485437
13	21374336	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0373134
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.160584
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.28
13	21374357	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0261438
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.816456
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0958904
13	21374436	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0394737
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.285714
13	21374438	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.344595
13	21374439	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.20915
13	21374462	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0263158
13	21374485	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.244681
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	21374507	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.114504
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.203125
13	21374516	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.198198
13	21374875	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0540541
13	21374877	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0684932
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.287671
13	21374890	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.056338
13	21374899	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.145161
13	21374904	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0357143
13	21374908	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.416667
13	21374913	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
13	21374916	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	21374942	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.025
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.100719
13	21374966	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0273973
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.47619
13	21374969	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0337838
13	21374971	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0880503
13	21375010	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0372671
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.217105
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.657143
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.347222
13	21375052	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0740741
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.139344
13	21375072	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	21460687	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	21460692	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.6
14	21460751	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	21460752	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.25
14	21460781	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	21460885	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.8
14	21497661	A->G	+	ENSG00000092203	TOX4	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	21631668	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
18	21632002	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	21632008	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	21632197	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.25
18	21632306	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	21632312	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	21639981	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.526316
16	21640001	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	21640011	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	21640031	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.48
16	21640035	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.296296
16	21640075	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.25
16	21640076	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.708333
16	21640084	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.26087
16	21640086	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	21640133	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.225806
16	21640134	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	21640135	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.225806
16	21640138	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.617647
16	21640141	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.647059
16	21640143	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	21640167	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.375
16	21640170	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	21640184	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0638298
16	21640210	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0978261
16	21640211	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.434783
16	21640219	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.606383
19	21805381	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21805382	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21805428	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.3
19	21806237	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21806335	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21806358	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.1
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.368421
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.210526
16	22285539	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.481481
16	22285570	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.237288
16	22285617	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	22285915	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.358974
16	22285946	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	22285956	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	22288376	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.363636
18	23296358	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	23465260	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.395833
16	23465266	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	23465274	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.131579
16	23465698	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.04
16	23465858	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	23673381	A->G	+	ENSG00000166847	DCTN5	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	23921714	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	23921849	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	23921898	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	23921929	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.1
3	23921980	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	23922079	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	23922106	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.769231
3	23922123	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	24000272	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0892857
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	24000297	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	24000371	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	24000377	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	24000386	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.147059
2	24000483	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	24001241	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	24001264	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	24001267	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	24002136	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	24002180	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	24002195	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	24002243	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	24002245	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	24002301	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.3
2	24002509	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002525	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	24002539	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	24002575	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24002584	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002590	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	24002632	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	24002639	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	24002671	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002672	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	24002678	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	24002684	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0392157
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0381679
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0699774
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0256959
22	24572507	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0222222
22	24572508	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0361446
22	24572529	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0232558
22	24572551	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0649351
22	24572562	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.031746
22	24572585	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0344828
22	24572599	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0327869
22	24572605	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.101695
22	24572606	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0344828
22	24572609	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0357143
22	24572610	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
22	24572611	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0535714
22	24572614	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.05
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0615385
7	25121041	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	25121042	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	25121067	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	25121805	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	25121815	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	25121818	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.129032
20	25446245	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
20	25446269	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
20	25446270	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	25447237	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.125
20	25447313	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	25447658	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.52381
20	25447672	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.125
20	25447684	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	25447867	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.178571
20	25447911	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	25447951	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.382353
20	25447952	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.235294
20	25447988	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	25448010	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	25448088	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	25725098	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.37037
22	25725110	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.575758
22	25725683	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.764706
22	25725689	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	25725692	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.125
6	25986434	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	25986489	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26522823	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26524450	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
22	26524455	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.125
22	26524469	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.12
22	26524476	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.458333
22	26524498	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.5
22	26524505	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	26525283	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.269231
22	26525285	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.62963
22	26525391	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	26876331	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	26973430	A->G	-	ENSG00000064115	TM7SF3	protein_coding	three_prime_utr	.	.	Alu	0.0306122
17	27312844	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
17	27312845	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
17	27312930	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
17	27312985	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0412371
12	27423603	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28497400	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	28497450	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	28498805	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	28498819	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.411765
1	28498825	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	28499503	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	28499519	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.6875
1	28499573	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.772727
1	28499738	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28499749	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.12
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.219124
16	29665119	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0226415
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136842
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0229508
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29665184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0422535
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.156794
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0524476
16	29665194	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29665239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0292398
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0310559
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29665290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0246305
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15311
16	29665317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.081448
16	29665330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0850202
16	29666251	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0307692
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0447761
16	29666269	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0390071
16	29666274	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0306513
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.215385
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.813433
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0898876
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.021978
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.218391
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.164948
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0784314
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.298969
16	29667599	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.172043
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.040404
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0776699
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0490196
16	29667620	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0679612
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0619469
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0462963
16	29667633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0306122
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.131148
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.144
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0261438
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0479452
16	29667708	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0429448
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.06875
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157576
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113821
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0655738
16	29667794	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0268456
16	29667802	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.02
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.175
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0902778
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.329787
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.388889
16	29668275	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.314286
16	29668315	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0506329
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2125
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.493671
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.265823
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.17
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29668493	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0243902
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.188235
16	29668507	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0224719
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.477778
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.154762
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0843373
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.114943
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0519481
16	29668541	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29668564	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0547945
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.583333
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0597015
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.112903
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.568966
16	29668588	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0677966
16	29668633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0652174
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.244444
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.243243
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0779221
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0352941
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.038835
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.407407
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0366972
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.238532
16	29668722	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0267857
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0604027
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0514706
16	29668909	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29668913	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.630769
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.228346
16	29668952	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0283019
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.245098
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.203704
16	29668991	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0288462
16	29668994	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29668995	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.132653
16	29668998	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.327434
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.036036
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.338843
16	29669030	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0916667
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0729927
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.161972
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0403226
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0734463
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0893855
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0924855
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.175439
16	29669241	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	29669245	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29669258	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	29669276	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	29669302	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29669303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.304348
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29669386	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.473684
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.928571
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0853659
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.144578
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.54878
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.660194
16	29669484	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0217391
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	29669616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.8125
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.642857
16	29669633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.7
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.538462
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.692308
16	29669729	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29669859	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0272727
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0683761
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0603448
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.367521
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.146341
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0352113
16	29670040	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0202703
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.112583
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0604027
16	29670090	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0228571
16	29670091	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0393258
16	29670098	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0382166
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0636943
16	29670103	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0728477
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0397727
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.415205
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0409357
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0490798
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181208
16	29670186	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0295858
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0509554
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133758
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.213018
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.287425
16	29670288	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0261438
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.320513
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0921053
16	29670303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0204082
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	29670312	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0451128
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0431034
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0887097
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.106061
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0378788
16	29670330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0296296
16	29670333	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0396825
16	29670339	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0462963
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0576923
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.039604
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.241071
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192661
16	29670374	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0277778
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.322917
16	29670398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0618557
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0753425
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.123377
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0510949
16	29670476	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.033557
22	30662624	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	30678389	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.35
8	30678390	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.233333
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.172727
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.182796
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.435252
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.271277
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.208556
8	30678525	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0226244
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.280156
8	30678608	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0434783
8	30678626	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0348525
8	30678629	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0478723
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.284123
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.151685
8	30678893	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0450644
8	30678933	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0399002
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.21673
8	30679037	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0837438
8	30679049	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0629921
8	30679062	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0352941
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.155738
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.417476
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.28436
X	30836586	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.25
14	31094338	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	31431089	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	1
11	31431120	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	31431131	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.210526
11	31431137	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.2
11	31431147	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	31431149	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	31431294	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31447721	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.08
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.176471
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.25
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.214286
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	32069045	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.363636
18	32070144	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.157895
18	32070281	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0769231
18	32070300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0689655
18	32070338	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0606061
18	32070418	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070423	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32070445	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0625
18	32071161	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.157895
18	32071235	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.15
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.097561
18	32071399	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.1
18	32071921	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.15
18	32071923	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32071927	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.227273
18	32071930	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0869565
18	32071974	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.114286
18	32072090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32072093	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.222222
18	32072156	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.230769
21	32268941	A->G	-	ENSG00000159055	MIS18A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	32307741	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.461538
2	32308592	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	32308593	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.583333
2	32308619	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	32310616	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	32310622	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.08
2	32310623	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.28
2	32310679	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.25
2	32310767	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	32310796	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.384615
21	32314263	A->G	-	ENSG00000170262	MRAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
21	32314336	A->G	-	ENSG00000170262	MRAP	protein_coding	three_prime_utr	.	.	Alu	0.0571429
13	32399052	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.125
13	32399063	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	32399068	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
13	32399925	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.125
13	32399996	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.416667
13	32400020	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	32400038	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.25
11	32604265	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32621211	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	32621275	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32682314	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32682327	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	32682518	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32682660	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32682681	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32683020	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.842105
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32683139	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.909091
1	32683655	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	32683885	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	32683894	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32683895	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32683901	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.777778
1	32683907	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	32853772	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0597015
6	33005247	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.102941
6	33005300	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.169231
6	33005309	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0357143
6	33005326	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.04
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.892308
6	33005392	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	33005415	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	33005429	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0576923
6	33005440	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.723404
6	33005453	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	33005459	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0943396
6	33005477	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	33005645	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005646	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.5
6	33005661	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005675	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33005742	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	33005769	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.131579
6	33005780	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.25
6	33005797	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.119048
6	33005798	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.159091
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0363636
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0526316
21	33263948	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.647059
21	33263954	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	33263955	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33263988	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.28
21	33263998	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.304348
21	33264042	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.277778
21	33264056	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.875
21	33264079	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	1
21	33264080	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.571429
21	33264718	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.5
21	33264779	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.238095
21	33264783	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.428571
21	33264788	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	33264835	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.125
21	33264840	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.117647
21	33264844	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.5
21	33264854	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.470588
21	33264911	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.75
21	33264920	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.611111
21	33264941	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.26087
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0373134
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.052381
6	33301411	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0223464
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0677507
21	33355830	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.25
21	33358741	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0410959
21	33358771	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.18
15	34231237	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.583333
15	34231250	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.416667
15	34231279	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	34231315	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.259259
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.346154
15	34231355	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	34231612	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.3125
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.391304
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.217391
15	34231722	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.1
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.454545
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.48
15	34231819	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.375
15	34231836	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	34232288	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	34232320	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	34232324	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	34232343	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	34232344	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	34232392	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0487805
15	34232455	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34232474	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
15	34232507	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	34470191	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	34470204	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	34470209	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.227273
5	34906442	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	34908402	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.125
5	34908407	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	35010640	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0701754
14	35276094	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0608696
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.370787
1	35602165	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
1	35602167	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.595745
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	35602250	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.386364
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.140625
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.174603
1	35602676	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.031746
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.234375
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.30137
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.243243
1	35602763	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.05625
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.291139
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.503185
22	35659830	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	35659846	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.125
22	35659905	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.321429
22	35659907	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	35659927	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.2
22	35659950	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.188889
22	35659964	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.352273
22	35659976	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.318584
22	35661142	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.134146
22	35661158	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.038961
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.532468
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	35661210	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0487805
22	35661220	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.782609
22	35661238	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.391304
22	35661247	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
22	35661278	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35661291	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.466667
22	35661307	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	35661308	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	36215301	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.714286
9	36216783	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.4
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.238095
9	36216833	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	36216837	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.137931
9	36216842	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.277778
9	36216901	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.4
9	36216945	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	36216953	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	36266147	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.785714
22	36266160	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.846154
21	36293862	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
21	36293883	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.103448
20	36781911	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	36890602	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.0597015
6	37028686	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0365854
2	37102037	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.346154
2	37102092	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	37102095	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37102118	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.146341
2	37102157	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.297297
2	37102171	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.135135
2	37102188	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.128205
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	37102209	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	37102218	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	37102226	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	37103423	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.5
2	37103468	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	37103469	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.347826
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37103873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0892857
2	37103880	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.109091
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	37103885	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37103887	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.355556
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	37103934	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	37103946	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	37103956	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37103973	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	37103976	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.233333
2	37104028	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.615385
2	37104078	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.583333
2	37104367	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37104388	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.16
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	37104496	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37104499	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.225806
2	37104519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	37104523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37104568	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	37104593	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.12069
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.188679
2	37104603	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.244898
2	37202381	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.04
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.442308
2	37202389	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	37202390	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.152174
2	37202435	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.171429
2	37202498	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	37202524	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37202525	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37202595	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	37204331	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.121212
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37204420	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37204443	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	37204536	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0412371
2	37204537	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0520833
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.173469
2	37204550	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0265487
5	37288665	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	37290221	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.205882
5	37290233	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0810811
5	37290234	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0810811
5	37290298	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	37290311	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	37290314	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.6
5	37290333	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	37290365	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.947368
5	37290390	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.470588
5	37290391	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.647059
5	37291284	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	37291344	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.785714
5	37291370	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	37291374	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	37291379	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.454545
5	37291438	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37291446	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	37291448	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	37291457	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.384615
5	37291471	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	37291472	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	37291516	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	37477644	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.5
17	37477867	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.5
17	37477872	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	37477910	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.7
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0819672
9	37503323	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0405405
9	37503328	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.075
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0972222
9	37503370	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0945946
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	37503457	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0377358
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0727273
9	37503467	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0416667
9	37503493	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0930233
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.038961
17	37614041	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.296296
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.48
1	37860992	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	37860993	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	37861008	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	37861011	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	37861028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	37861032	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	37861033	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.447368
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	37861118	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	37861124	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	37861463	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	37861469	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	37861481	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0754717
1	37861509	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0363636
1	37861534	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	37861785	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	37861791	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	37861815	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	37861870	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	37861873	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	37861906	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	37861912	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	37861973	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	37862028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	38723466	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.424242
7	38723468	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.28125
7	38723474	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.882353
7	38723531	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.263158
7	38723551	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.818182
7	38723600	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.388889
7	38723602	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.882353
7	38723612	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.875
7	38723641	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.421053
7	38723648	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.3125
7	38724620	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0625
7	38724686	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	38724718	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	38724722	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.647059
7	38724742	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.34375
7	38724758	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.441176
7	38724785	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	38724795	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	38724805	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.107143
7	38724865	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	38849532	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.125
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.5
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.129032
17	38849925	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.170732
17	38849996	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0857143
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	38868085	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	38868139	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0363636
19	38868163	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.127273
19	38868164	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.206897
19	38868182	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.196721
19	38868212	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	38868217	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.125
19	38868226	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	38868388	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.15493
19	38868411	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.18
19	38868412	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	38868415	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.516667
19	38868416	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0491803
19	38868428	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	38868429	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0727273
19	38868430	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.183333
19	38868460	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.189655
19	38868465	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0344828
19	38868510	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	38868512	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.159091
19	38868522	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.116279
19	38868589	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.220779
19	38869028	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	38869067	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.234043
19	38869073	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0930233
8	38970533	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0319149
8	38970679	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0215054
8	38970718	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.112676
8	38970719	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0704225
8	38970743	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0379747
8	38970748	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.211111
8	38971692	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.116667
8	38971701	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	38971706	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0533333
8	38971782	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0615385
8	38971810	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.046875
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.209677
8	38971897	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.203125
8	38971934	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	38972218	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.27
8	38972235	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.298969
8	38972256	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.263158
8	38972316	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0238095
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.390805
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.135922
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.147059
8	38972406	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0232558
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.169492
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.384615
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.031746
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0483871
8	38972977	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0405405
8	38972981	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0235294
8	38972993	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0217391
8	38973005	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0235294
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.197917
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0824742
8	38973066	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	38973067	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.140625
8	38973070	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.05
22	39018748	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0656934
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.115108
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.178571
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.03
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.193277
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	39019869	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0510204
22	39019880	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0373832
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.105769
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.375
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.37931
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0333333
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.04
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0218978
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.314961
17	39256056	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	39256155	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	39256199	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39257045	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.7
17	39257121	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39257122	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	39257148	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	39490472	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	39490484	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	39490528	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.4
19	39490530	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.533333
19	39491951	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.2
19	39491952	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.5
19	39491979	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.25
19	39491980	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.25
19	39491986	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	39549051	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.588235
4	39549095	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.125
4	39549156	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.521739
4	39549167	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.375
4	39549347	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.578947
4	39549358	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.95
4	39549388	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.866667
4	39549398	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.30303
4	39549404	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.21875
4	39549487	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.411765
4	39549520	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.52
4	39549559	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.761905
3	40462644	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	40463467	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.2
3	40464039	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.3125
3	40464044	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.2
3	40464063	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	40464106	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	40466425	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	40466431	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	40466452	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.2
15	40662781	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.125
15	40662795	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.37037
15	40662798	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	40662800	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.08
15	40662801	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.16
15	40662809	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.208333
15	40662813	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.130435
15	40662862	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.15
15	40662892	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.444444
15	40662935	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.263158
15	40663177	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.25
15	40663201	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	40663318	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	40663319	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	40663331	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	40825843	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.25
5	40827060	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.12
5	40831163	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.3125
5	40831173	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.263158
5	40831185	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	40831243	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	40831251	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	41542432	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	41542505	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	41542510	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	41542540	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	41542568	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	41543950	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	41543954	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	41543968	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	41543969	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.163265
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.22449
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.411765
19	41871518	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	41871534	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	41871544	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	41871556	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	41871559	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.216216
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0784314
19	41872624	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.097561
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.108696
19	41872636	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.25
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.28
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.267857
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.482143
19	41872801	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0980392
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42057678	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42078150	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.304348
6	42079637	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.32
6	42079666	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42079688	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.529412
6	42079776	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42079814	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.12
6	42079815	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.16
6	42080538	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.15
6	42080539	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.238095
6	42080576	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42080610	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0810811
6	42207359	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.046875
6	42207404	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0517241
6	42207466	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.03125
15	42532150	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0485437
15	42532171	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0275229
15	42532271	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.025641
15	42532297	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0469799
15	42542986	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42543009	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	42543475	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0697674
15	42567144	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
15	42567145	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0851064
15	42567184	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	42567254	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
15	42567307	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.125
15	42567308	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	42567320	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.185185
15	42567321	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42567556	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
15	42567584	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.08
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	42567750	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.185185
15	42567882	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
15	42567937	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.12
15	42569507	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.227273
15	42569541	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42569542	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	42886842	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0361446
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
6	42886895	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0240964
6	42886926	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0352941
6	42886943	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
6	42886944	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0246914
6	42887319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
6	42887368	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0566038
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.329412
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.597826
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0744681
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.170213
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.131868
6	42888255	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0776699
6	42888281	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0229885
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.550562
6	42888304	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.103896
6	42888307	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.028169
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.260274
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.383562
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.216216
6	42888318	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0533333
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.244898
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.938776
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.714286
6	42888380	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42888393	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.028169
6	42888418	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42888419	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0294118
6	42888420	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.025641
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.368421
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.134921
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.810606
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.123967
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.057971
6	42889221	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
6	42889226	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0305344
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.122302
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.280576
6	42889283	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.037037
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.11811
6	42889288	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0280374
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0654206
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.40367
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0520833
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0212766
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
6	42889361	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.213592
6	42889382	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0315789
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	42889406	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.025
21	42909268	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	42909389	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.115385
21	42909813	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020436	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.208333
8	43020450	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	43020458	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43020459	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43020505	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43020514	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43020528	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43020529	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43020550	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.15
8	43020553	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.210526
8	43020558	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43020593	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	43020594	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.785714
8	43020639	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.26087
8	43020646	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.208333
8	43020671	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.258065
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.27907
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.27027
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43020891	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.216216
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.297297
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.128205
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.146341
8	43020940	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
8	43020945	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43020952	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.464286
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.235294
8	43020987	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.108108
8	43021004	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
8	43021008	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43021014	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.128205
8	43021022	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	43021023	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43021030	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43021032	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.354839
8	43021047	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43021343	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43021354	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.156863
8	43021368	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0816327
8	43021378	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.04
8	43021383	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.113636
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.392857
8	43021404	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43021433	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	43021443	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.578947
8	43021445	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	43021470	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.173913
8	43021478	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.130435
8	43021483	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	43021486	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.730769
8	43021500	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.148148
8	43021525	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	43021544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.208333
8	43021562	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.16129
8	43021563	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.206897
8	43021575	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.366667
8	43021808	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.4
8	43021851	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43021854	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.263158
8	43021943	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	43023510	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	43023552	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	43023553	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	43023582	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43023586	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.75
8	43023708	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43028220	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
8	43029211	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.109091
8	43029224	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
8	43029250	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0422535
8	43029279	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	43029280	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0704225
8	43029333	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	43029422	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
17	43218068	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	43218145	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	43218146	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	43218406	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.12
17	43218414	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.28
17	43218429	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.08
17	43218441	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.47619
17	43218484	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.15
17	43218499	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.08
17	43218500	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	43218540	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.1
17	43218541	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	43218546	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	43218643	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	43219472	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.08
17	43219478	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	43381597	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	43381606	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	43615496	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.615385
6	43615507	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	43787802	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.135135
12	43787828	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	43787870	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.2
12	43787871	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.16
12	43787936	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	43788748	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.888889
12	43788772	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	44170094	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	44170113	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.384615
22	44170248	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44359166	A->G	+	ENSG00000179152	TCAIM	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	44578744	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	44578754	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0379747
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.235294
3	44749145	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	44749170	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.135135
3	44749199	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.24
3	44749224	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.413793
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.73913
3	44749367	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.478261
3	44749385	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	44749412	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749829	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	44749851	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	44749859	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.846154
3	44749905	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.2
3	44749966	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44750044	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	44750061	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.125
3	44750062	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.3125
7	44801870	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0206897
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.719697
7	44801910	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0240964
7	44801912	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0306748
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.230303
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.204082
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.4
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.179487
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.1125
7	44802423	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0260417
7	44829479	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0298507
13	45030480	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
13	45030505	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.357143
13	45030618	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.6
13	45030645	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	45030646	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.4
13	45030647	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.4
20	45077457	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.186335
20	45077460	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0685714
20	45077525	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0484848
20	45078229	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	45078299	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.253165
20	45078305	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0804598
20	45078306	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.51087
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0631579
20	45078310	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
20	45078323	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0232558
20	45078345	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.029703
20	45078347	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.118812
20	45078396	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0315789
20	45079028	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0529801
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.475
20	45079076	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0438596
20	45079095	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.16092
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.29703
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.743119
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.046875
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0289855
20	45079150	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0296296
20	45079165	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.033557
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0945946
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.125749
20	45079200	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0359281
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.461078
20	45079204	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.038961
13	45334144	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	45340986	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	45509673	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.4
1	45509686	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	45549673	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.434783
19	45549676	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	45549683	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	45549717	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.5
19	45549974	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.818182
19	45550058	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.5
19	45550071	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	45550082	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	45550101	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	45551015	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	45551163	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	45552346	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	45680497	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.384615
3	45680498	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.769231
3	45680500	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.5
3	45680550	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	45680551	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	45680555	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.769231
3	45680563	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.473684
3	45680755	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	45680756	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.1
3	45680761	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	45680795	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680808	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	45680849	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	45680850	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	45680889	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	45680895	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	45703697	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.9
19	45703698	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.3
19	45703704	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.5
12	45954852	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	45954853	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	46364621	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	46364622	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	46603756	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.2
X	46603770	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	46604571	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	46604606	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.263158
X	46604614	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46604628	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	46604659	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	46604678	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	46605974	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.192308
X	46605988	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.407407
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0304348
8	47977112	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0377358
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.198473
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0365297
16	48352384	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	48352390	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.04
16	48352391	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	48352443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	48352444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	48352513	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	48352514	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.114286
16	48353264	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.26087
16	48353290	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.25
16	48353291	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.04
16	48353296	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	48353304	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	48353367	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	48353385	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.409091
16	48354334	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.3125
16	48354337	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.3
16	48354347	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.227273
16	48354443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.1
16	48354469	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.16
16	48354470	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.16
16	48354471	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	48354472	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	48748204	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.376623
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0285714
3	48749586	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0263158
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.16129
3	48749613	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0273973
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	48749619	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0597015
3	48749652	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0684932
3	48749675	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	48749676	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0819672
3	48749685	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.180328
3	48749752	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0576923
3	48749759	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0350877
3	48749771	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0793651
3	48750019	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	48750033	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.191489
3	48750147	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	48750161	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0285714
3	48750198	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0684932
3	48750201	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.104651
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.163043
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.556818
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.319149
3	48750280	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0430108
3	48750281	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0795455
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.168675
3	48750301	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0222222
3	48750324	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0285714
3	48750423	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.448276
3	48750476	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.455696
17	48864316	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
17	48864325	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.05
17	48864326	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.1
3	49415288	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0277778
3	49415351	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0227273
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0888889
3	49415355	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0224719
3	49415419	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.030303
13	49631158	A->G	+	ENSG00000152213	ARL11	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	49830403	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	49830409	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.454545
10	49973405	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	49973420	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	49973421	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.227273
10	49973494	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	50105383	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	50105417	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.692308
16	50105572	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.234043
16	50105604	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.589286
16	50105606	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	50105615	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.186441
16	50105630	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0677966
16	50105631	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.12069
16	50105645	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0363636
16	50105651	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.301887
16	50105652	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.403846
16	50105662	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	50105669	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.244444
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.140351
14	50246001	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.15
14	50246011	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.190476
14	50246060	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50325958	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.37931
14	50325998	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	50326005	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	50326055	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50326083	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	50326109	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.136364
14	50326110	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	50326145	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	50326859	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50326894	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	50326921	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0967742
14	50326985	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	50327126	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	50327150	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1
14	50327185	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.714286
14	50327284	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50327317	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.454545
14	50327323	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	50327535	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.47619
14	50327566	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	50327569	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327590	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.190476
14	50327604	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.722222
14	50327606	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1
14	50327645	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.590909
14	50327662	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327665	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50327693	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	50393235	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.704545
16	50673046	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	50673189	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0422535
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0958904
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.402174
12	50930339	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.28877
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.209677
12	50930397	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0679012
12	50930406	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0478469
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.202703
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.319444
12	50930441	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.037037
12	50930458	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.140845
12	50930525	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0238095
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.156934
12	50930539	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0359477
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.158416
12	50930601	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0272374
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.196319
12	50930658	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0410095
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0921502
12	50930670	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0207469
12	50930683	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.057554
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.284247
12	50930688	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0204082
12	50930701	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0424028
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.193353
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.257053
12	50930725	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0276923
12	50930739	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0254777
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.132701
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0596591
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.252149
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.354523
12	50931446	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0759494
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.32716
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.341317
12	50931463	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0233918
12	50931493	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0431655
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.216
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0806452
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.145833
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.217391
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.107692
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.12381
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0272727
12	50931600	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.026087
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.141593
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.104348
12	50931620	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0243902
12	50931623	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.03125
12	50931632	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.028777
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0381679
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.209677
12	50931671	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0566038
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.03125
12	50931752	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0441176
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.4125
12	50931762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0280374
12	50931800	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.035461
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0568562
17	50964331	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.125
15	51913206	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.769231
15	51913735	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0416667
15	51913749	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0638298
15	51913757	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.191489
15	51913758	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.148936
15	51913774	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0961538
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	51913812	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.216216
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.21875
15	51913854	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.157895
15	51913866	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	51913892	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.25
15	51913938	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.533333
15	51913957	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.5
15	51913958	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	51914115	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.1
15	51914393	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.3
15	51914409	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.457143
15	51914410	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.552632
15	51914460	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.173913
15	51914493	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.125
15	51914502	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.411765
15	51914518	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51914873	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51915004	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	52373024	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
13	52691084	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.107143
13	52691218	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
13	52691226	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	52703455	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.25
14	52775636	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	52775658	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	52775699	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.139535
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.192308
14	52775712	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0566038
14	52775760	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.473684
14	52775770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.131579
14	52775782	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.12
14	52775800	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.186047
14	52775801	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
14	52775826	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
14	52775850	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.15625
14	52775921	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	52775933	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	52776028	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	52776115	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	52776141	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.172414
14	52776676	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.736842
14	52776693	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	52776694	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	52776716	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.238095
14	52776720	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.238095
1	52823190	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.12
1	52823198	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.551724
1	52823252	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	52823875	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	52823898	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.04
1	52824014	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.534884
1	52824086	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	52824087	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52824201	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.393939
1	52824207	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	52824218	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	52824220	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.540541
1	52824268	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	52824594	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52824626	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.16
1	52825735	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.28125
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.212121
1	52825762	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	52825763	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52839344	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	53411158	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.5
12	54233829	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	54237137	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.0862069
12	54237935	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.04
12	54240499	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	54240500	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	54240522	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.75
X	54560786	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.733333
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
15	55317452	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.195652
14	55367649	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.2
14	55368248	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.3125
14	55368331	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	55370680	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	55371684	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	55371732	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.769231
4	55371781	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.384615
4	55371784	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	55371802	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.416667
12	55821671	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	55825105	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	55825184	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.1
4	56459916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.275862
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.253521
4	56459990	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0674157
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0561798
4	56460020	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0208333
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0982143
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.522876
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.157534
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.165517
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0514706
4	56460161	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.020979
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0408163
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0958904
4	56460699	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0212766
4	56460707	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0659341
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.340206
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.3
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0252101
4	56460844	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0238095
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.193182
4	56460856	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0227273
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.206897
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.247788
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.87069
4	56460926	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0357143
4	56460931	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0677966
19	57214494	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.2
3	57272806	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	57646338	A->G	+	ENSG00000146143	PRIM2	protein_coding	three_prime_utr	.	.	Alu	1
19	57757017	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57757019	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57757104	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	57807443	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57807717	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.4
19	57845743	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	57845790	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57863841	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57864869	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.25
3	58318551	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.125
3	58318651	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	58318745	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	59201707	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.194444
17	59201709	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.287671
17	59201715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0447761
17	59201716	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0441176
17	59201806	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0961538
17	59201810	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	59201824	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	59201834	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0512821
17	59201860	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.131579
17	59201872	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.219512
17	59201897	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	59201903	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.605263
17	59201920	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.216216
17	59201921	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.594595
17	59201923	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0810811
17	59203468	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.16
17	59203477	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.606061
17	59203485	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	59203486	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	59203487	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.114286
17	59203494	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0857143
17	59203499	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0810811
17	59203603	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0377358
17	59203604	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0357143
17	59203626	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	59203649	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0681818
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.264706
17	59203673	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	59203694	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.175
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.388889
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	59203706	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	59203708	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	59203711	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.419355
17	59203715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	59203752	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0810811
17	59203753	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.289474
17	59203773	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	59203777	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0789474
17	59203789	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	59204152	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.07
17	59204275	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0654206
17	59204661	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0428571
12	59784250	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	1
15	60422221	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.411765
15	60422224	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.588235
15	60422271	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	60422301	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.5
15	60422302	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.4375
15	60422303	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	60422717	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.538462
15	60422727	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.733333
2	61050331	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	61800225	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
11	61800228	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
11	61800254	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0405405
17	62450567	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	62790544	A->G	-	ENSG00000168569	TMEM223	protein_coding	three_prime_utr	.	.	Alu	0.0408163
15	63153642	A->G	-	ENSG00000185088	RPS27L	protein_coding	three_prime_utr	.	.	Alu	0.0540541
11	63956713	A->G	+	ENSG00000110583	NAA40	protein_coding	three_prime_utr	.	.	Alu	0.15
11	63956853	A->G	+	ENSG00000110583	NAA40	protein_coding	three_prime_utr	.	.	Alu	0.2
15	64140640	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.1
15	64140645	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.1
15	64142130	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.25
15	64142174	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	64142243	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	64142303	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	64322854	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0423529
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0257611
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0683761
17	64323002	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0429185
15	64364763	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0857143
15	64364783	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	64364792	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.113636
15	64364824	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.104167
15	64364825	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0416667
15	64365274	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0967742
15	64365331	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	64448979	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.297297
12	64448989	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.378378
12	64449012	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.125
12	64449013	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.358974
12	64449022	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	64449040	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	64449052	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.09375
12	64449074	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.875
12	64449075	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.705882
12	64449084	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.2
12	64449088	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	64450281	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.771429
12	64450291	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.95
12	64450338	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	64450354	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.65
12	64450358	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0454545
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.642857
12	64450371	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.05
12	64450419	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.159091
17	64467719	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	64467724	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	64467773	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	64467774	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	64467792	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	64468339	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0544218
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.899371
17	64468388	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0247934
17	64468389	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0672269
17	64468399	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0803571
17	64468418	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0900901
17	64468428	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	64468430	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.049505
17	64468450	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0217391
17	64468563	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0265487
17	64468566	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.116071
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.135135
15	65149326	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.210526
15	65149375	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	65149386	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	65149439	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.4
15	65149469	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	65149748	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	65149760	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.448276
15	65149774	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.387097
15	65149777	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.178571
15	65149784	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	65150112	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.1
15	65150138	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.361111
15	65150145	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	65150188	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	65150197	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	65150208	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	65150239	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	65150240	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	65659472	A->G	-	ENSG00000074621	SLC24A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	65775920	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.123188
11	65775963	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
11	65775967	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.101124
11	65775987	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.152542
11	65776002	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.197368
11	65776029	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
11	65776158	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.148649
11	65776164	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0547945
11	65776871	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.103175
11	65776894	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
11	65776910	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.308571
11	65776911	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.372671
11	65776912	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.101911
11	65776955	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
11	65776999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0359712
11	65777014	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.042735
11	65777019	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.259542
11	65777032	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.204545
11	65777052	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.274809
11	65777096	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.515337
11	65777104	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0460526
7	66153251	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.030303
7	66153252	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0294118
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0307692
7	66153262	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0392157
7	66153318	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0535714
7	66153345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0363636
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	66153805	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0447761
7	66153806	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0298507
7	66153875	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.160714
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.156863
7	66153900	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0892857
7	66153914	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	66153973	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.102041
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	66154237	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.116279
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.22
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.183673
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.102041
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.5
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.185185
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.152542
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.161765
7	66154366	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.126984
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	66333542	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.1
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	66520807	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.444444
11	66524241	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	66524247	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.25
17	67338770	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	67338814	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.5625
17	67339176	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	67339204	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	67339236	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.666667
17	67339327	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	67339338	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	67339343	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.454545
17	67339344	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	67339361	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.2
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.535211
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.233333
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.237288
1	67409042	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.542857
1	67409051	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	67409142	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.109091
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	67409171	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.421053
11	68755482	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	68755604	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.107143
11	68755606	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.172414
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.137931
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	68755857	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.104478
11	68755871	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0298507
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.19697
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.15493
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755931	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.09375
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.228571
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	68755990	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.766667
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	68756029	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.235294
11	68756066	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	68765099	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	68765168	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	68765171	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.09375
12	68766231	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	68766232	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	68766285	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.291667
12	68766286	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	68766291	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.217391
12	68766322	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.833333
12	68766325	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	68766326	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	68766407	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	69210076	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.030303
5	69210102	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0289855
5	69210179	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0638298
5	69210267	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.245283
5	69280913	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.15625
5	69280917	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.433333
5	69281278	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	69281963	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.2
5	69282110	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.2
5	69282123	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	69282475	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	69282476	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	69282479	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	69322813	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	69322986	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.8
16	69323021	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	69327316	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.2
16	69328068	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70247172	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.633333
16	70248678	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0967742
16	70248685	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	70248755	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70249236	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	70249315	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	70249322	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	70249335	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.354839
16	70249336	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.40625
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	70249868	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	70249877	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	70249888	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	70249889	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.107143
16	70249912	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	70354367	A->G	+	ENSG00000198887	SMC5	protein_coding	three_prime_utr	.	.	Alu	0.0327869
16	70373115	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	70574341	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.08
16	70574345	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	70588936	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	1
6	70588939	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.8
6	70588940	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.8
6	70588941	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.2
6	70588986	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.3
6	70589019	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.769231
6	70589045	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.238095
6	70589050	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.636364
6	70589226	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.823529
6	70589265	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.666667
6	70589266	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	70589350	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.2
6	70589371	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	71702345	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.310345
12	71702587	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.357143
12	71702590	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	71703142	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	72234063	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	72234269	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.3
10	72234282	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.25
10	72234373	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0645161
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.140845
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.309859
10	72234923	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.290323
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.129032
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.229508
10	72234992	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0285714
10	72234998	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0983607
10	72234999	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0322581
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.31746
10	72235009	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0847458
10	72235030	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0535714
10	72235031	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.140351
10	72235040	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	72235044	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0816327
10	72235070	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.310345
10	72235076	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.7
11	72286142	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	72286143	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	72286512	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72286537	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72286539	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.4
11	72286562	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.5
11	72286613	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	72286614	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.454545
11	72286630	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72286677	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	72287508	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72288228	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	72288231	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	72289708	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.263158
11	72289709	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.108108
11	72289731	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	72290699	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	73056864	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	73056876	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	73056903	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	73056904	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	73056955	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.1
4	73056958	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	73057026	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.242424
4	73057182	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	73057209	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.228571
4	73057247	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	73057264	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.473684
4	73057278	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	73057279	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	73057318	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	73057339	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	73057379	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0512821
4	73057380	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	73057388	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0540541
4	73057697	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.162791
4	73057732	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.484848
4	73057735	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0724638
4	73057737	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.114286
4	73057755	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0535714
4	73057766	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0862069
4	73057781	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	73057785	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	73057807	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	73057824	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.15
4	73057834	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	73057850	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.545455
4	73057851	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	73057944	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.4
4	73057945	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.5
10	73249034	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.102804
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.025641
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.10303
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.183544
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.122581
10	73249086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0533333
10	73249097	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0451613
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.034965
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.180124
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.592857
10	73249821	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0361446
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.192308
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.125
10	73249834	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	73249893	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0625
10	73249905	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0566038
10	73249907	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0566038
10	73249910	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0394737
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.196429
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.160714
10	73249964	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0869565
10	73250018	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0505051
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.178947
10	73250026	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0224719
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.28
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.170213
10	73250259	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	73250260	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	73250329	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0357143
6	73424352	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	73424884	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.1
6	73424950	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	73424951	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.26087
6	73425031	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	73425036	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.37931
6	73425100	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.15
6	73425125	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.25641
6	73425148	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0930233
6	73516501	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0257732
6	73516513	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
6	73516586	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0367647
6	73593820	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	73594290	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.428571
6	73594291	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	73965601	A->G	-	ENSG00000187097	ENTPD5	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74058071	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.403226
14	74058083	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	74058084	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.152174
14	74058138	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.189189
14	74058840	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.108108
14	74058841	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	74060242	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	74060272	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.148148
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.298246
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.175439
7	74231776	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
7	74231777	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.045977
7	74231791	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.043956
7	74231844	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0204082
7	74231873	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0217391
7	74231966	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	74450762	A->G	-	ENSG00000090863	GLG1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
11	74455757	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.151515
11	74455866	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.16
11	74456245	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.321429
11	74456249	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.206897
11	74456250	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.233333
11	74456275	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.580645
16	74621898	A->G	-	ENSG00000168411	RFWD3	protein_coding	three_prime_utr	.	.	Alu	0.0434783
14	74735609	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	74735643	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	74735669	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74735687	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.103448
14	74735699	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.806452
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.580645
14	74735735	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
14	74735736	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.194444
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.195122
14	74735850	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
14	74735966	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	74736145	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.113208
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.241379
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.20339
14	74736159	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
14	74736175	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.030303
14	74736247	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
14	74736248	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
14	74736250	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
14	74736259	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
14	74736265	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	74736364	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	74736394	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	75420562	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	75443941	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.25
16	75445458	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	75445523	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.208333
16	75445570	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	75445572	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	75445576	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	75445586	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	75445919	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.1
16	75445934	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	75445996	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.3125
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	75446063	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	75446075	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	75446088	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.25
16	75446112	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	75446123	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.2
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	1
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.533333
16	75599210	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
16	75599219	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0652174
16	75599261	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	75599319	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	75599324	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	75599337	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75889193	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	75889831	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.193548
17	75890115	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	75890131	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	75890171	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.121212
4	75917659	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0632911
4	75917660	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0379747
4	75917693	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0338983
17	75942997	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.255814
17	75943098	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	75943131	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	75943974	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0980392
17	75943986	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.255814
17	75943987	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.116279
17	75943996	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	75944013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.411765
17	75944028	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	75944039	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	75944106	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.538462
17	75944112	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.692308
17	75944122	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	75944150	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.3125
17	75944151	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	75944152	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	75944218	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.145833
17	75944226	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.862745
17	75944794	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.458333
17	75944807	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75944808	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.388889
17	75944836	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.318182
17	75944837	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.625
17	75944851	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	75944878	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75944907	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	75944918	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	75944920	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	75944921	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	75944922	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	75944928	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75944949	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	75944950	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	75945013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.1
17	75945018	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.28125
17	75945027	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	76205039	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.25
14	76205069	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.25
17	76779132	A->G	+	ENSG00000092931	MFSD11	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	77023818	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.545455
11	77023819	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.2
11	77023824	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	77025615	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	77025649	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.210526
11	77025667	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.0857143
11	77025668	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	77025680	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.75
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0633803
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.219858
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0326797
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0328947
X	77827609	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0223464
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0755814
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.143713
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.114094
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0583333
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0436893
X	77828020	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
X	77828041	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.070922
X	77828051	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0479452
X	77828055	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.035461
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0965517
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0616438
X	77828088	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0505618
X	77828095	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
X	77828117	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.026738
X	77828118	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0481283
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.211111
X	77828147	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0248447
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.127273
X	77828155	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0597826
X	77828156	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.136612
X	77828157	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0451977
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
X	77828175	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0609756
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.284848
X	77828207	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0457516
X	77828212	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0206897
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.11976
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.28022
X	77828382	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.164384
X	77828383	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.149351
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.322148
X	77828400	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0320513
X	77828403	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0316456
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.279221
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.432258
X	77828442	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0536585
X	77828455	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0239234
X	77828484	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77828485	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	77828503	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0517241
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.158798
X	77828510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0471698
X	77828520	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0705882
X	77828541	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0315789
X	77828545	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.026178
11	78068542	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.375
11	78068592	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	78068663	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.6875
11	78068904	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.28
11	78069056	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.12
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	78069058	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	78069071	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.347826
11	78069105	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	78069162	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.125
17	78207449	A->G	+	ENSG00000183077	AFMID	protein_coding	three_prime_utr	.	.	Alu	0.0588235
10	80522325	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.0444444
10	80522346	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.0232558
5	80627466	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.027027
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0447761
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0547945
5	80627502	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0243902
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.12
5	80627513	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0933333
5	80627514	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0405405
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0675676
5	80627534	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0298507
5	80627541	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	80627547	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0735294
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.137255
5	80627583	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	80627604	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	80627605	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.647059
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.352941
5	80628024	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0540541
5	80628036	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0810811
5	80628038	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0540541
5	80628087	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.361111
5	80628093	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.121212
5	80628097	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	82254438	A->G	+	ENSG00000152348	ATG10	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	83005358	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.151515
15	83005573	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	84642218	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.333333
15	84642257	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.454545
15	84642258	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.166667
15	84642756	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.111111
X	85090829	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.190476
X	85090845	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	85090867	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	85090879	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.2
X	85090880	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	85090897	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.2
X	85091020	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.611111
X	85091232	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	85091937	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	85091953	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.5
X	85091976	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.16
X	85091977	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.12
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0352941
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0613208
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.151659
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0703518
2	85319346	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.171171
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0733945
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.04
2	85549498	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	86022807	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	86025091	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.25
1	89182706	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	89182709	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	89183631	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0363636
1	89183644	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.12
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.254902
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.264706
1	89183712	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	89183741	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	89183779	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.515152
1	89183780	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	89183804	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	89183858	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.16
1	89183860	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.08
1	89183866	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.590909
1	89183874	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.578947
1	89183877	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.3
16	89563592	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.344828
6	89634485	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	89634502	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	89634503	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.290323
6	89634509	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	89634850	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.1
6	89634852	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	89634862	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.1
6	89634886	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.3125
6	89634987	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	89636948	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.04
15	90083336	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	90390059	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.3
1	93366748	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	93366749	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.176471
9	93448441	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.09375
11	93735605	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	93735630	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.5
3	94127965	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	94127966	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	94416062	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	94417171	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.5
11	94417181	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	1
11	94417182	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	1
11	94417205	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	94417249	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	94417250	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.208333
11	94417258	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	94612670	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	94612687	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.6
10	94612698	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.2
10	94612727	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.266667
10	94612805	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.263158
10	94612806	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.368421
10	94612815	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.529412
10	94612873	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	94792296	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	96249515	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	97726819	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0441176
8	97726820	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.15942
8	97726932	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0521739
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.152174
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0549451
8	97727245	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0340909
8	97727253	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	97727366	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0342466
8	97727380	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0277778
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0891089
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.122642
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.288462
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.132353
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.188679
8	97728712	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.150943
8	98190522	A->G	-	ENSG00000104361	NIPAL2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.131579
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.803797
12	98548917	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.238994
12	98548918	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.204969
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.262195
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0862069
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0506329
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0614035
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0896861
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.491304
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0273973
12	98549069	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0497512
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.79703
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.213592
12	98549225	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0559006
12	98549233	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.198758
12	98549240	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0308642
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.95679
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0307692
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.498258
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.168919
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.164474
12	98549371	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.032967
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0545024
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0608108
12	98604831	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	98605391	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	98605608	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	98605616	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98605700	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	98605847	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98605857	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.375
12	98605922	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98605968	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.416667
12	98606008	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	98606037	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	98733550	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0422535
12	98733559	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0246914
12	98733567	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0222222
12	98733572	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	98733668	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.12
12	98733669	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	98873697	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.611111
6	98873710	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	99195810	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.05
2	99195826	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.125
2	99195827	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	99195848	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0895522
2	99195867	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0428571
2	99195873	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.419753
2	99195935	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.123457
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	99195970	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0422535
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.290323
2	99195987	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	99196001	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.203704
2	99196002	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.132075
2	99196026	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0634921
2	99196076	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0784314
2	99196324	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0847458
2	99196345	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	99196352	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	99196354	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.240741
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.642857
2	99196394	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.215686
2	99196401	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.125
2	99196425	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.686275
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.381818
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.163265
2	99196539	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	99196540	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	99196552	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	99196557	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	99196568	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	99493453	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0296296
10	99713813	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0253165
10	99713847	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0422535
10	99713869	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0263158
10	99713919	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.028169
1	100024279	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	100024436	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	100232502	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	100232510	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	100232524	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.107143
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.666667
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	1
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.526316
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.137931
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0405405
10	100232933	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.125
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.372881
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.320755
10	100233065	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
10	100233091	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	100233121	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.09375
10	100233141	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.551724
10	100233142	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.428571
7	100399968	A->G	+	ENSG00000085514	PILRA	protein_coding	three_prime_utr	.	.	Alu	0.0544413
X	101009593	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	101009613	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.4
X	101009637	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	101009669	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	101009678	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	101009679	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.259259
X	101009685	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.212121
X	101010290	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.115385
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	101010312	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0571429
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	101010330	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.28125
X	101010402	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	101010404	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.7
X	101010408	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.171429
15	101070748	A->G	+	ENSG00000154237	LRRK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.125
7	101091556	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	101091569	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.15
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.368421
7	101091606	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.3
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.368421
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	101271386	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.119048
2	101271398	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.25
2	101271399	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	101271421	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	101271520	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0491803
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	101271537	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.104167
2	101271546	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	101823506	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	101823564	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	101823592	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101823728	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.115385
3	101823803	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.380952
3	101823929	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	101823933	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	101823964	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	101823970	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	101823980	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	101824543	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.172414
3	101824560	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	101824664	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.4
3	101824679	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.25
3	101824695	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	101824739	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	101826913	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	102449580	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0247934
7	102449596	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0275229
7	102449811	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	102449860	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	102449978	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	102450991	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.08
7	102451036	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.097561
10	102476282	A->G	+	ENSG00000138111	MFSD13A	protein_coding	three_prime_utr	.	.	Alu	0.263158
4	102753838	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.05
4	102753890	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0681818
7	103102400	A->G	+	ENSG00000161048	NAPEPLD	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	103102436	A->G	+	ENSG00000161048	NAPEPLD	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	103399713	A->G	-	ENSG00000164933	SLC25A32	protein_coding	three_prime_utr	.	.	Alu	0.0625
14	103590740	A->G	+	ENSG00000256053	APOPT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	105049680	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.103448
4	105846161	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.16
4	105846789	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.227273
4	105846795	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.1
4	105846893	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	106666052	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	108042691	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.855072
11	108365796	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.125
11	108365853	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	108365909	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.384615
11	108365978	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.15
11	108365979	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	108367011	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0645161
11	108367087	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	108367088	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.185185
11	108367117	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	108367127	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	108367226	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	108367230	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	108367248	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.2
11	108367249	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.25
12	108785193	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	108786648	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	109463124	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.454545
6	109463151	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	109464711	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.25
4	109689104	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	109689108	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.106383
12	109851674	A->G	-	ENSG00000139433	GLTP	protein_coding	three_prime_utr	.	.	Alu	0.0238095
12	109851752	A->G	-	ENSG00000139433	GLTP	protein_coding	three_prime_utr	.	.	Alu	0.0235294
9	112471627	A->G	+	ENSG00000119471	HSDL2	protein_coding	three_prime_utr	.	.	Alu	0.0204082
2	112531083	A->G	+	ENSG00000114999	TTL	protein_coding	three_prime_utr	.	.	Alu	0.0454545
9	112684279	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	112684284	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.103448
9	112684306	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.136364
9	112684353	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.4375
9	112684388	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	112684441	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.6
9	112684445	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.4375
9	112684466	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.125
9	112684467	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.16
9	112684470	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0967742
9	112684500	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.107143
9	112684505	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.583333
9	112684549	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.461538
9	112684556	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	112685199	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.380952
9	112686593	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.173913
9	112686634	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.321429
9	112686635	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.107143
9	112686661	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.235294
9	112686666	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
9	112686770	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.477273
9	112686771	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.581395
9	113261032	A->G	+	ENSG00000176386	CDC26	protein_coding	three_prime_utr	.	.	Alu	0.0227273
9	113291957	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.0625
9	113292011	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.0731707
9	113292155	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.0408163
5	115829866	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.242424
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.567568
5	115829935	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.551724
5	115830034	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.2
5	115830653	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0408163
5	115830789	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0357143
12	116714628	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.448276
12	116714631	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	116715105	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	116715123	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	116715180	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	117029666	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.375
12	117029739	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	117029749	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	117029775	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.25
12	117029793	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.6
X	119453558	A->G	+	ENSG00000077713	SLC25A43	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	119453588	A->G	+	ENSG00000077713	SLC25A43	protein_coding	three_prime_utr	.	.	Alu	0.0535714
X	119538637	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.384615
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.473684
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.594595
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.789474
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.392857
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.42
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.102041
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.16
X	119539314	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.14
X	119539315	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.125
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.322581
X	119539368	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.1
10	119573235	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	120437941	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0295359
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.044164
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0597484
X	120438106	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0233645
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.571429
12	120460751	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.1
12	120460842	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.125
12	120460854	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.103448
12	120460855	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.193548
12	120460884	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	120460894	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.428571
12	120460911	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.8
12	120461140	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.47619
12	120461175	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	120461195	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.277778
12	120461196	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	120461208	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.913043
12	120461235	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0681818
12	120461261	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.707317
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.109091
5	122027179	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.296296
5	122027180	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.321429
5	122027209	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	123411140	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123411167	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	123411180	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.5625
12	123411181	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	123411213	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	123411221	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	123411244	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	123411277	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123411301	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	123411302	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123412196	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.238095
12	123412239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.4
12	123412280	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	123412306	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	123412337	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	123412340	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	123412413	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	123412414	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.172414
12	123412421	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.275862
12	123412436	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.36
12	123413239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	123661530	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	123661553	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	123661768	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	123661809	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	123661824	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0923077
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
12	123661862	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0806452
12	123662049	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.1
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123662054	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	123662123	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123909133	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	123909158	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123909266	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123909293	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	123909305	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123910615	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123910703	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.08
X	123910709	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123910721	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	123910747	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	123911555	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123911557	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123911598	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123912452	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.193548
X	123912456	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.228571
X	123912484	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	123912485	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.09375
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.84375
X	123912514	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0571429
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	123912765	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123912789	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	123912830	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	123912836	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	123912839	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.533333
X	123912845	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	123912865	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123912870	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.705882
X	123912891	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	123912907	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.263158
X	123912922	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123913002	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123913015	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.15
X	123913039	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	123913257	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.352941
X	123913262	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.368421
X	123913273	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.190476
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	123913319	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.5625
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	125026680	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	125026765	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0243902
12	125026845	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	125027412	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.65
12	125027414	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	125027415	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	125027421	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.25
12	125027441	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	125027483	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	125027484	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	125027550	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	125027555	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.571429
12	125027559	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	125027582	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	125027627	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.615385
12	125027743	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	125027749	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	125027814	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.6
12	125027817	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.8
12	125027948	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.5
12	125027949	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.586207
12	125027961	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	125027963	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	125027970	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	125029251	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0229885
12	125029466	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0721649
11	125656244	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	125675961	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	125675988	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	125676008	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
11	125676034	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.05
5	126625387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	126625390	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	126625562	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625862	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	127843890	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.652174
2	127843982	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	127844060	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	127845418	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	127845461	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	127845472	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	127845504	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	127846010	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	127846011	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	127846037	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	127846131	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	1
2	127846266	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	128036585	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	128036590	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.15
4	128036907	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.421053
4	128036916	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	128036930	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.12
4	128036931	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.304348
4	128036972	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	128036999	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.208333
4	128037228	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	128037434	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.25
4	128037467	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.3
4	128037472	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.7
4	128037573	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.368421
4	128037600	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	128191597	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	128191604	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0227273
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.371429
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.878788
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.625
2	128193272	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	128193283	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.578947
2	128193316	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	128193346	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	128193352	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	128193356	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	128193381	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.727273
2	128193391	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	128193393	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	128193417	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	128193418	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.928571
2	128193426	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	128193432	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	128193452	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.423077
2	128193465	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.72
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.288462
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.529412
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.698113
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	128194146	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	128194173	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	128194192	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	128194210	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128194336	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	128194367	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
2	128194380	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	128194396	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
2	128194406	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.04
2	128194432	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	128194441	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	128194447	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
2	128194450	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	128194467	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
2	128194476	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
2	128194501	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.030303
2	128194510	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	128194529	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.134615
2	128194541	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0943396
2	128195103	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0405405
2	128195104	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.060241
2	128195126	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
9	128305442	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.363636
9	128306844	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.538462
9	128306864	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128307148	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.363636
9	128307157	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.545455
7	128307922	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.4
7	128307926	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.384615
9	128308458	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128308477	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128308771	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	128308787	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	128308789	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	128308799	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.727273
9	128308828	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	128308835	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.6
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0961538
7	128502779	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.264706
7	128502787	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128502830	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	128502885	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	128503107	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.102041
7	128503108	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.12766
7	128503568	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.5
7	128503743	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	128503816	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1
7	128503878	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0810811
7	128504760	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.642857
7	128504837	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128505029	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131162260	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201055	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.130435
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	131201104	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201149	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.147059
5	131201152	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.277778
5	131201167	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	131201175	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.107143
5	131201453	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201461	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201488	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201516	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201527	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131201530	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.318182
5	131201531	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131201540	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201560	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.16
5	131201588	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	131201599	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.903226
5	131201625	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	131201647	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.583333
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201838	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.130435
5	131201874	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	131202081	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.3
5	131202086	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131202108	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131202231	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131202239	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	131202266	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.21875
5	131202275	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131202280	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	131202304	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	131202309	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	131202373	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.366667
5	131202374	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.551724
5	131202379	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.375
5	131202383	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.28125
5	131202387	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.121212
5	131202443	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.47619
5	131202444	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.619048
5	131202581	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131202612	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	131202616	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.583333
5	131202638	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131202645	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.692308
5	131202651	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	131203422	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.148148
5	131203573	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	131204142	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.318182
5	131204153	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131204168	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.129032
5	131204202	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.121212
5	132482788	A->G	-	ENSG00000125347	IRF1	protein_coding	three_prime_utr	.	.	Alu	0.030303
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.421875
12	132721348	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.056338
12	132721356	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0214286
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.390728
12	132721375	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0348837
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.054878
12	132721434	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0245399
12	132721435	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.025641
12	132721436	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0253165
12	132721439	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.037037
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0508475
12	132721471	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0608696
12	132721473	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0420168
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.207317
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.224138
12	132721539	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0491803
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.143791
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.210884
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0443038
12	132721706	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0283688
12	132721717	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0326797
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.179856
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.308411
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.292683
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.057971
12	132722352	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0365854
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.037037
12	132722424	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0232558
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.220339
12	132769969	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0810811
12	132769978	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.189189
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	132770042	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	132770861	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	132770867	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.2
5	134402494	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0224719
5	134402579	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0483871
5	134829837	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.0666667
5	134900555	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	134900591	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.346154
5	134900596	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.444444
5	134900597	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	134900844	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.2
5	134900862	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	134900888	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	134906027	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.15
9	134906059	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.25
9	134906064	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	134906135	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	134906159	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
9	134906168	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.407407
9	134906173	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.12
9	134906200	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.608696
9	134906214	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.375
9	134906230	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.106383
9	134906814	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.163265
9	134906827	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.361702
9	134906828	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.244898
9	134906849	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.09375
9	134906853	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.135135
9	134906866	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.184211
9	134906879	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.047619
9	134906905	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.162162
9	134906908	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	134906972	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
9	134906996	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	134907015	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.310345
5	134960828	A->G	+	ENSG00000132570	PCBD2	protein_coding	three_prime_utr	.	.	Alu	0.2
4	139045647	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	139045723	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.277419
3	141947588	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	141948848	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	141948915	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.636364
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	145745243	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.04
1	145745244	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.122449
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.170732
1	145745279	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0930233
1	145745297	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	145745384	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145745386	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.193548
1	145745394	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.08
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.647059
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.588235
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	145745554	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	145745573	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	145745596	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.4
1	145746102	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	145746104	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	145746114	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	145746126	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	145746143	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	145746149	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145746164	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0789474
1	145921978	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.153846
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.230769
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.384615
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.285714
1	145922002	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.125
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.454545
1	145923018	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.4
1	145923078	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.5625
1	145923094	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.666667
1	145923098	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.125
1	145923101	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.117647
1	145923130	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.111111
1	145923134	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.235294
1	145923163	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.5
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	149591241	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.113208
6	149591242	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	149724613	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149724619	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149724620	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.4
6	149724747	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149724748	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149724792	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.6
6	149724793	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.466667
6	149724815	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	149724861	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	149724862	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.703704
6	149725201	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	149725204	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.16
6	149725213	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.478261
6	149725215	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149725253	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	149725279	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	149725296	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	149725299	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	149725348	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.163636
6	149725349	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.254545
6	149725350	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0545455
6	149725359	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.4375
6	149725409	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.625
6	149725423	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.782609
6	149725426	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.115385
6	149725465	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.25
6	149725467	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.35
6	149725477	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.3125
6	149725502	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	149725506	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.235294
6	149725507	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.588235
6	149725537	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.678571
6	149725550	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.259259
6	149726151	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0634921
6	149726226	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	149726234	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	149726240	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.27907
6	149726282	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	149726284	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0526316
6	149726359	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	149983651	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.6
5	149983710	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	149983829	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	149983851	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	150308577	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150308583	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308645	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308756	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	150308757	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	150731109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0253456
1	150731131	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0362903
1	150731136	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.235495
1	150731143	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	150731144	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0401338
1	150731153	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0830671
1	150731158	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.207407
1	150731166	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0427807
1	150731171	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0921053
1	150731185	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.124352
1	150731196	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.116667
1	150731200	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.229814
1	150731203	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0828025
1	150731216	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.136905
1	150731220	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.054878
1	150731221	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.414634
1	150731222	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.387879
1	150731225	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0772947
1	150731231	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0241546
1	150731239	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.123711
1	150731240	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	150731244	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.140541
1	150731266	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0300429
1	150731270	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0226415
1	150731276	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.398026
1	150731279	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0251572
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.126761
1	150731301	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0538462
1	150731305	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0750408
1	150731306	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0391517
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.624382
1	150731326	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0229226
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.115616
1	150731362	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0711679
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.6951
1	150731384	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0706605
1	150731386	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0597015
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.135404
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.43
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.173387
1	150731972	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0515807
1	150732000	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.28
1	150732007	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.220085
1	150732010	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.186408
1	150732024	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0292683
1	150732068	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0805452
1	150732072	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0685786
1	150732092	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0372272
1	150732109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.202797
1	150732111	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.109531
1	150732129	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.116356
1	150732137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.174973
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.581311
1	150732160	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.303738
1	150732177	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142447
1	150732178	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.229831
1	150732183	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0689013
1	150732184	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0756303
1	150732701	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0208111
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0496709
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0411328
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0780303
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0493916
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.14807
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.11606
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0574526
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0392699
1	150732860	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0203016
1	150732881	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0207469
5	151268183	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	151268338	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0287474
4	152622854	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	152622866	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0325581
1	155883270	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	155883278	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.2
1	155883460	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.15
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.556962
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0294118
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.115942
3	156540447	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.046875
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.925
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.527778
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.225
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.62069
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.103774
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.242775
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.173077
3	156541510	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0220588
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.303922
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0679612
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.110294
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	156541581	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0337838
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.601093
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.518919
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
7	156970189	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	156970478	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	156971419	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	156971436	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	156971486	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.52
7	156971520	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.12
7	156972771	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.454545
6	159679824	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
6	159679849	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.053719
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.106122
6	159679878	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
6	159679900	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0338462
6	159680691	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0766551
6	159680692	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0522648
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.101215
6	159680756	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0217391
6	159680770	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.040404
6	159680773	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
6	159680779	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	160995497	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	160995524	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	160995589	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.5625
1	160995630	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.5
1	160996511	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0614525
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.325926
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.37037
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.266187
1	160996594	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0375
1	160996603	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.128713
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0843373
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.741935
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.4
1	160998027	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	160998058	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.358491
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.259259
1	160998106	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.04
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.425926
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0970874
4	165075117	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.15
4	165075134	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	165075135	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.473684
4	165075136	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.368421
4	165075137	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.210526
4	165075214	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	165076887	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165077490	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.27027
4	165077502	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	165077503	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	165077798	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.25
4	165078036	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.225
4	165078037	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.075
4	165078994	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	165078996	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	168244389	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	168244413	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0446429
1	168244441	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0504202
1	168249256	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.104478
1	168249284	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.116667
1	168249305	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.171875
1	168249335	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0843373
1	168249336	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	168249498	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	168251049	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	168251125	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	168251169	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.163934
1	168251174	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	168251189	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.027027
1	168251225	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.025641
1	168251237	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0441176
1	168251251	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0724638
1	168251291	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
5	175528000	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	175529175	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	175529218	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	175529287	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	179073557	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.241379
1	179073562	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.310345
1	179073566	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.322581
1	179074957	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	179074961	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	179074965	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.310345
1	179074970	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.148148
1	179074975	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	179075144	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	179357400	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	179357403	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	179357453	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.135135
1	179357773	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	179357787	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.36
3	179397767	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0866142
3	179397789	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.021978
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.109375
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.894737
3	179397847	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.283333
3	179397857	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.06
3	179397864	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
3	179397868	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	179397904	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	179397908	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179397910	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	179397913	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	179397993	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	179397996	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.258065
3	179398001	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.558824
3	179398002	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.5
3	179398008	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	179398010	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.121212
3	179398024	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.179487
3	179398258	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.391304
3	179398270	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	179398271	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	179398280	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.782609
3	179398289	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	179398332	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.375
3	179398349	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.642857
3	179398387	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	179398429	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.9
3	179398432	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.2
3	179399245	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.138889
3	179399314	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	179399340	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.169492
3	179399367	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.05
3	179399376	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.028169
3	179399382	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0277778
3	179399411	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0212766
3	179399445	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0384615
3	179399453	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0428571
3	179399454	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	179399478	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.027027
1	184791989	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.551724
1	184791990	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	184791991	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.241379
1	184792028	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.162791
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.306122
1	184792095	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	184792136	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0724638
1	184792137	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.191176
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.612245
1	184792159	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.338462
1	184792186	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.116667
1	184792213	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0289855
1	184792214	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.41791
1	184792227	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.118644
1	184793326	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0684932
1	184793338	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	184793339	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0229885
1	184793353	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.224138
1	184793364	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	184793373	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0925926
1	184793376	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	184793388	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0727273
1	184793390	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.314815
1	184793447	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	184793456	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.16
1	184793493	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.16
1	184793542	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	196352418	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.194444
3	196352421	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.205882
3	196352434	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.2
3	196352512	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.2
3	196352518	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	196352519	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196352735	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.322581
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.5
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	196352809	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	196352812	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.4
3	196352820	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.375
3	196352826	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.5
3	196352835	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196352843	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.08
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	197884875	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	200909918	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	200909945	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	200977594	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200977600	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.464286
2	200977668	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.538462
2	200977685	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200977688	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	200977694	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.3
2	200977711	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	200977756	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.52381
2	200977769	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.647059
2	200977808	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200977821	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	200977838	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.461538
2	200977846	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.692308
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.7
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.5
2	201164002	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0545455
2	201164004	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0754717
2	201164010	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.04
2	201164011	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0576923
2	201164088	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	201164112	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.05
2	201164118	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	201164144	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.209302
2	201164154	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	201165371	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.125
2	201165388	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	201167246	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0338983
2	201217945	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.310345
2	201218007	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	201218013	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201218039	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.125
2	201218334	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	201218428	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	201218522	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	201219050	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0784314
2	201219149	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.47619
2	201219150	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	201219176	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.152174
2	201219182	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	201219195	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.188679
2	201287278	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.243243
2	201287383	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.615385
2	201287385	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202876819	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202877430	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202879060	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	202879169	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202879513	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.5
2	202879517	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	202879518	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.368421
2	202879777	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	202879827	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202879858	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202879873	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202879921	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	202879935	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	202880382	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202880385	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	203297314	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297320	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297519	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	203297587	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	203297722	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	203297723	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	203297772	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	203297865	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	203297878	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297891	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	203297942	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	203298267	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	203305461	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203305462	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	203305474	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.26087
2	206116721	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206117111	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	206117112	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.411765
2	206117132	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	206117142	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	206117150	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	206117172	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	206117571	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	206118408	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	206118409	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	206118526	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	206118531	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	206118543	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	206118574	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	206118582	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	206121521	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	206121522	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	206122202	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	206122212	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122217	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	206122221	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206122225	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	206122242	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	206122254	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	206122372	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
2	206122384	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.382979
2	206122385	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	206122412	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	206122418	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.56
2	206122437	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	206122466	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.473684
2	206122472	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	206122481	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122504	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.884615
2	206122505	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	206122507	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	206122529	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	206122546	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.615385
2	206122591	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	206122765	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	206122837	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.423077
2	206122867	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122873	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122875	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	206122881	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206122905	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206122908	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	206122910	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	206122912	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	206122913	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	206122923	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	206122928	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	206122951	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	206122987	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	206123001	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	206123007	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	206123008	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	207754653	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.375
2	207754690	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	207754697	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	207754737	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	207754738	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	207754755	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.809524
2	207754767	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	207754779	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.269231
2	207754926	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.518519
2	207754938	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	207754945	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	207754951	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	207754975	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	207755012	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	207755018	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.846154
2	207755025	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.785714
2	207755146	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.05
2	207755281	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	207755282	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	207755380	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.385965
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.16
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.245283
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.716667
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.188679
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	216501892	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.146341
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216501928	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	216502070	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	216502080	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.114286
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.257143
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	216502175	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216502176	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	216502178	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	216502180	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.366667
2	216502206	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	216502216	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.04
2	216502248	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	220057919	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	220057921	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.647059
1	220057933	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.777778
1	220057934	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	220057988	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.826087
1	220057996	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	220058005	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	220058076	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	220058129	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	220058142	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.315789
1	220058604	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.116667
1	220058617	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.851852
1	220058621	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	220058640	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	220058646	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.102564
1	220058655	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	220058669	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.113636
1	220058711	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	220058724	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	220058796	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.227273
1	220058801	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	220058802	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.761905
2	223757127	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.15
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	225786982	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.031746
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.163265
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	225983677	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.102041
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	149887304	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.352941
1	149887567	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.125581
1	149887568	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.0560748
1	149887575	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.318841
1	149887584	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.71831
1	149887592	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.361702
1	149887647	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.434783
15	82538982	A->G	+	ENSG00000284803	AC245033.4	processed_transcript	exon	.	.	Alu	1
19	2291961	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.133333
19	2291991	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.153846
19	8418599	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.0392157
19	8418602	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.0862069
19	8418668	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.0379747
1	16592284	A->G	-	ENSG00000219481	NBPF1	protein_coding	five_prime_utr	.	.	Alu	0.333333
1	23959998	A->G	+	ENSG00000189266	PNRC2	protein_coding	five_prime_utr	.	.	Alu	0.102564
1	54047868	A->G	-	ENSG00000116209	TMEM59	protein_coding	five_prime_utr	.	.	Alu	0.181818
7	66740232	A->G	-	ENSG00000272831	AC027644.3	antisense	five_prime_utr	.	.	Alu	0.0487805
8	38247381	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.153846
8	38247382	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.307692
8	38247394	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.454545
10	16437433	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.136364
10	16437438	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.0869565
10	16437439	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.0952381
10	72220129	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0327869
10	72220249	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0291262
12	31074082	A->G	+	ENSG00000013573	DDX11	protein_coding	five_prime_utr	.	.	Alu	0.444444
12	68624669	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.117647
14	22913787	A->G	-	ENSG00000100461	RBM23	protein_coding	five_prime_utr	.	.	Alu	0.142857
14	92118892	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.0307692
16	18900010	A->G	-	ENSG00000157106	SMG1	protein_coding	five_prime_utr	.	.	Alu	0.590909
16	57174218	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.166667
17	28672802	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.166667
17	28672803	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.166667
17	28672805	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.272727
17	62508436	A->G	+	ENSG00000146872	TLK2	protein_coding	five_prime_utr	.	.	Alu	0.235294
18	12869028	A->G	-	ENSG00000175354	PTPN2	protein_coding	five_prime_utr	.	.	Alu	0.8
19	37324833	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.181818
19	37324839	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.181818
19	44662304	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.0810811
19	44662309	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.0625
19	44662356	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.0851064
19	44662389	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.0384615
19	53872744	A->G	+	ENSG00000179820	MYADM	protein_coding	five_prime_utr	.	.	Alu	0.0869565
19	53872762	A->G	+	ENSG00000179820	MYADM	protein_coding	five_prime_utr	.	.	Alu	0.0769231
1	121087372	A->G	+	ENSG00000198019	FCGR1B	protein_coding	five_prime_utr	.	.	Alu	0.642857
2	232724601	A->G	+	ENSG00000204120	GIGYF2	protein_coding	five_prime_utr	.	.	Alu	0.08
3	179325099	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.030303
3	179325102	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.031746
3	179325121	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0483871
4	153702627	A->G	+	ENSG00000137462	TLR2	protein_coding	five_prime_utr	.	.	Alu	0.375
4	189941998	A->G	+	ENSG00000109536	FRG1	protein_coding	five_prime_utr	.	.	Alu	0.533333
5	163437663	A->G	+	ENSG00000113328	CCNG1	protein_coding	five_prime_utr	.	.	Alu	0.682927
6	163423154	A->G	+	ENSG00000112531	QKI	protein_coding	five_prime_utr	.	.	Alu	0.166667
6	163423191	A->G	+	ENSG00000112531	QKI	protein_coding	five_prime_utr	.	.	Alu	0.363636
8	100935031	A->G	-	ENSG00000164924	YWHAZ	protein_coding	five_prime_utr	.	.	Alu	0.0740741
12	123459602	A->G	+	ENSG00000184209	SNRNP35	protein_coding	five_prime_utr	.	.	Alu	0.166667
12	123459626	A->G	+	ENSG00000184209	SNRNP35	protein_coding	five_prime_utr	.	.	Alu	0.142857
MT	16051	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	16162	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	16519	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	73	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	10770982	A->G	-	ENSG00000101871	MID1	protein_coding	Intergenic	.	.	Alu	1
X	118686452	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	118687447	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	120426544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1311128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	1311169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	1311715	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	1311717	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	1312137	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
X	1312140	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	1312182	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	1312191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
X	1312192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
X	1312200	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	1312201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	1312229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.48
X	131794036	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intergenic	.	.	Alu	0.181818
X	1384154	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1505414	A->G	+	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	0.461538
X	15691324	A->G	+	ENSG00000186312	CA5BP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
X	15692379	A->G	+	ENSG00000186312	CA5BP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
X	15752088	A->G	+	ENSG00000169239	CA5B	protein_coding	Intergenic	.	.	Alu	0.181818
X	15792343	A->G	+	ENSG00000169249	ZRSR2	protein_coding	Intergenic	.	.	Alu	0.181818
X	16737130	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.235294
X	16737132	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.25
X	16737300	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.285714
X	16737305	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	19566072	A->G	-	ENSG00000147010	SH3KBP1	protein_coding	Intergenic	.	.	Alu	0.333333
X	20138436	A->G	-	ENSG00000173674	EIF1AX	protein_coding	Intergenic	.	.	Alu	0.181818
X	23701610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	23701671	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
X	23701730	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	24075951	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.272727
X	24075956	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.181818
X	24180008	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.545455
X	24180181	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.6
X	24180182	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.4
X	24180482	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.181818
X	24180508	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.125
X	24180511	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.368421
X	24180547	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.166667
X	24180557	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.157895
X	24180563	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.125
X	24180617	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.384615
X	24180621	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.307692
X	24180622	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.307692
X	2694538	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.133333
X	2695791	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.25
X	2695854	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.285714
X	303449	A->G	-	.	.	.	Intergenic	.	.	Alu	1
X	3610370	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.166667
X	3610399	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.117647
X	38310228	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.25
X	38310230	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.1875
X	39786962	A->G	-	.	.	.	Intergenic	.	.	Alu	1
X	44881358	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.176471
X	44881419	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.133333
X	44881744	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.4375
X	44881751	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.277778
X	44881752	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.333333
X	44881780	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44881817	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.3
X	44881849	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	44881865	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.117647
X	44881962	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.190476
X	44883133	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.105263
X	44883162	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.277778
X	44885262	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44886197	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44887120	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.117647
X	44887140	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.176471
X	44887182	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.105263
X	44889093	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44889096	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44897592	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.272727
X	44897681	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.263158
X	44897698	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.133333
X	44897702	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.357143
X	44900643	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44940109	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.363636
X	44940127	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.3
X	44940133	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.272727
X	44940846	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44940849	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.272727
X	44940850	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44940852	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44949314	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.5
X	44956971	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	47152050	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.133333
X	54561640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.201923
X	54562718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
X	54563297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.803571
X	54563341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.180723
X	54563585	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
X	54563671	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
X	54563784	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0289855
X	54564683	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54564789	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
X	54564798	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
X	54564808	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
X	54564813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
X	54565603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
X	54565921	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54565925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54565993	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	54566056	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
X	54566083	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
X	54566848	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
X	54567391	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
X	54567392	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54567432	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	71293298	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.272727
X	71293812	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.2
X	71293873	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.615385
X	71564997	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.181818
X	74580460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	78120730	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.2
10	916973	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.3
10	928689	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.181818
10	928750	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.181818
10	929415	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.3
10	929432	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.571429
10	929473	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.384615
10	990005	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.111111
10	999188	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.181818
10	999212	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.384615
11	582394	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.272727
12	378427	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	381899	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.5
12	382869	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.3
12	383444	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	383476	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.3
19	809121	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1647255	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.545455
1	1647280	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.4375
1	1879517	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.4
1	1884484	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1888645	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	8876911	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.230769
1	8876913	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.230769
1	8907755	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	9563860	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.181818
1	9927364	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0434783
1	9927417	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0769231
1	9927478	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
1	9928039	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0434783
1	9928670	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0681818
1	9928694	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0571429
1	9928767	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0769231
1	9928827	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0689655
2	9531063	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9532997	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9542281	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9542795	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9542800	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9549247	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9549249	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9617696	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.272727
2	9617734	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	9935792	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	9935984	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	5123943	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.1
3	5124082	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0952381
3	9799546	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.166667
3	9799547	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.166667
3	9985651	A->G	-	ENSG00000125037	EMC3	protein_coding	Intergenic	.	.	Alu	0.166667
4	1695555	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.181818
4	1695565	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.166667
4	2854245	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.3
4	2854249	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.8
4	2854265	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.2
6	3078174	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.133333
6	4798106	A->G	+	ENSG00000153046	CDYL	protein_coding	Intergenic	.	.	Alu	0.230769
6	7118144	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.4
6	7120333	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7120369	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.153846
6	7120375	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.153846
6	7121169	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.272727
6	7167589	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.117647
7	4787443	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.8
9	3520048	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.133333
9	3520064	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	3520744	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.107143
9	3520752	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	3520754	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.25
9	5701392	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.181818
9	5701410	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.230769
9	5701479	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.3
9	5704340	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.166667
9	5704350	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.181818
9	6442104	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.3
10	6239948	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.2
11	3698484	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3722704	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.4
11	3795334	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.3
11	3795415	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.4
11	9248191	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9253139	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.5
11	9259681	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9261527	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9261560	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9261595	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9261598	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9261695	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
12	1692900	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.181818
12	1692930	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.142857
12	1701951	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.153846
12	1789162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
12	6586480	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.230769
12	7928766	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.3
12	9658649	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.428571
12	9658712	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.818182
12	9670356	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.545455
12	9757683	A->G	-	ENSG00000110848	CD69	protein_coding	Intergenic	.	.	Alu	1
12	9857800	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.692308
12	9857816	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.631579
12	9857827	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.173913
12	9857828	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.173913
12	9857873	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.25
12	9857937	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.857143
12	9857938	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.809524
12	9857951	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.333333
12	9857970	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.4
12	9858801	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.111111
12	9858822	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.296296
12	9858823	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.111111
12	9858827	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.230769
12	9858830	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.346154
12	9858949	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.434783
12	9858954	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.166667
12	9858964	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.653846
12	9858969	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.592593
12	9858989	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0810811
12	9859037	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0731707
12	9859053	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.1
16	1937963	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1937987	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
16	1937988	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
16	3240681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
16	3240728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
16	3240788	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
16	3240812	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
16	3240874	A->G	-	.	.	.	Intergenic	.	.	Alu	0.304348
16	3240880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
16	3241581	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0652174
16	3241594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.179487
16	3241603	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
16	3241614	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
16	3241638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.30303
16	3241684	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
16	3241687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0425532
16	3241688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
16	3241704	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12766
16	3241705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.148936
16	3241723	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
16	3241736	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
16	3241741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
16	3241760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
16	3241781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12069
16	3241782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.155172
16	3241788	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0540541
16	3241800	A->G	-	.	.	.	Intergenic	.	.	Alu	0.112676
16	8931433	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.294118
16	8933141	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.2
17	1175910	A->G	-	ENSG00000159842	ABR	protein_coding	Intergenic	.	.	Alu	0.230769
17	1175924	A->G	-	ENSG00000159842	ABR	protein_coding	Intergenic	.	.	Alu	0.5
17	1175927	A->G	-	ENSG00000159842	ABR	protein_coding	Intergenic	.	.	Alu	0.285714
17	1175942	A->G	-	ENSG00000159842	ABR	protein_coding	Intergenic	.	.	Alu	0.333333
17	2600146	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.3
17	2608592	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2608596	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2608651	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.25
17	5208241	A->G	-	ENSG00000261879	AC087500.1	antisense	Intergenic	.	.	Alu	0.25
17	5211329	A->G	-	ENSG00000161929	SCIMP	protein_coding	Intergenic	.	.	Alu	0.2
17	5211442	A->G	-	ENSG00000161929	SCIMP	protein_coding	Intergenic	.	.	Alu	0.181818
17	8924171	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.2
17	8943172	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0952381
17	8943239	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.181818
17	8943367	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.266667
17	8943368	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.266667
17	8943370	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.25
17	8943374	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.4375
17	8949636	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.142857
17	8963630	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0540541
17	8963658	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0625
17	8964161	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0540541
17	8964173	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.05
18	2660091	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.181818
18	2660148	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.125
18	2708470	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2708515	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2717440	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.157895
18	2722236	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.307692
18	2722254	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.181818
18	2850505	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.125
18	2850506	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.111111
18	2852719	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.181818
18	2854565	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.263158
18	2854611	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.157895
18	2854655	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.105263
18	2896802	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.3
18	5441212	A->G	-	ENSG00000082397	EPB41L3	protein_coding	Intergenic	.	.	Alu	0.6
18	9110532	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.133333
18	9111397	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.214286
18	9142720	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.153846
18	9142727	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.153846
18	9143479	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.214286
18	9143480	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9143486	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9143560	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.153846
18	9143642	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.214286
18	9143672	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.230769
18	9145222	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.111111
18	9145223	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.111111
18	9146291	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9153018	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.2
18	9153068	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.1
18	9153069	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.25
18	9153081	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.157895
18	9160014	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.166667
18	9160015	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.307692
18	9198730	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.533333
18	9198733	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.1875
18	9198792	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0666667
18	9198798	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.37037
18	9199135	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.117647
18	9727487	A->G	+	ENSG00000168461	RAB31	protein_coding	Intergenic	.	.	Alu	0.142857
19	1078526	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.444444
19	1078594	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.384615
19	1078600	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.307692
19	1078631	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.25
19	1079302	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.2
19	1079344	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.181818
19	1079358	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.25
19	1079359	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.181818
19	1079382	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.333333
19	1079389	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.3
19	1589541	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.2
19	1590377	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.3
19	1797865	A->G	-	ENSG00000130270	ATP8B3	protein_coding	Intergenic	.	.	Alu	0.214286
19	2077156	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.105263
19	2077234	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.190476
19	2077254	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.142857
19	2077290	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.142857
19	2077813	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.181818
19	2077960	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.2
19	2078063	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.181818
19	2084018	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.181818
19	2170054	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.25
19	2293246	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.416667
19	2293271	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.769231
19	3540232	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.166667
19	3542676	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.181818
19	3542679	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.5
19	3542750	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.2
19	3759172	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.181818
19	4915512	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.333333
19	4915550	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.2
19	4915626	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.230769
19	4915633	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.1875
19	4916075	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	4916272	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.166667
19	5596391	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.181818
19	5596469	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.181818
19	5596473	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.181818
19	5596615	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.2
19	5662092	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.9
19	5662128	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.3
19	6904748	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.105263
19	6905553	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.3
19	6905590	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.181818
19	8517850	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
19	8517862	A->G	-	.	.	.	Intergenic	.	.	Alu	0.529412
19	8517863	A->G	-	.	.	.	Intergenic	.	.	Alu	0.470588
19	8517896	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
19	8517920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
19	8517922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
19	8517928	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
19	8517938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
19	8517959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	8518033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
19	8518047	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	8518052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
19	8518114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	8519630	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
19	8519637	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
19	8540475	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.578947
19	8540562	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.4
19	8540907	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.142857
19	8541081	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.173913
19	8541086	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.291667
19	8541092	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.136364
19	8541122	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.117647
20	1529407	A->G	-	ENSG00000242324	AL049634.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
20	1532935	A->G	-	ENSG00000242324	AL049634.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0666667
20	3919146	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.363636
20	3919147	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.363636
20	3961139	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3961149	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.363636
20	3961157	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.545455
20	3961158	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3962135	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3962783	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3962787	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.307692
20	3962838	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.307692
20	3962865	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.5
20	3962871	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3962938	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.416667
20	3962965	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3964793	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.3
20	3990628	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.214286
20	3991498	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3991524	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3997487	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.272727
20	3997489	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.6
20	3997573	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3997578	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3997668	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3997692	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.214286
20	4008765	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.133333
20	4012168	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	4012169	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	5129840	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.142857
20	5129841	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.142857
20	5562465	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5564746	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	5564779	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5572159	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	5572169	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0869565
20	5572947	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.227273
20	5572950	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5573016	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5573031	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.115385
20	5573154	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0612245
20	5573178	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.204545
20	5573222	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.206897
20	5573304	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.15
20	5573620	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5573622	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.346154
20	5573681	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.108108
20	5573686	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.358974
20	5573693	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5573709	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5578953	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.263158
20	5578985	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0769231
20	5579031	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5579057	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.157895
20	5579090	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.294118
20	5579139	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	5579147	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5579459	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5579485	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5579566	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.533333
20	5579567	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5579585	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	5580504	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5580536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.416667
20	5581150	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5587492	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5587516	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.357143
20	5587539	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5587638	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5587645	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.45
20	5588242	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0731707
20	5588773	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0769231
20	5589367	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5589368	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5589439	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0588235
20	5589446	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5589480	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0645161
20	5589512	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.170732
20	5589525	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0512821
20	5589549	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	5589598	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0454545
20	5589600	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	5590353	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5599431	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0869565
20	5600454	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5600463	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5600732	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.272727
20	5600868	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5600878	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	5600933	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5601246	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	5601497	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5601545	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5601628	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.230769
20	5601641	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5602766	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.333333
20	5604019	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.266667
20	5604020	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
21	8218777	A->G	-	ENSG00000278996	FP671120.1	lincRNA	Intergenic	.	.	Alu	1
21	8446047	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	10404774	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.166667
1	10406294	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	1
1	10417875	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.272727
1	11021879	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.0909091
1	11021885	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.347826
1	13767534	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.181818
1	13767748	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.217391
1	13767765	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.190476
1	13767808	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.230769
1	13767824	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	13767854	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.6
1	13767868	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.454545
1	13767901	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13767931	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.166667
1	13768480	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.4
1	13768506	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.3
1	13768612	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.181818
1	16896187	A->G	+	ENSG00000058453	CROCC	protein_coding	Intergenic	.	.	Alu	0.208955
1	16896330	A->G	+	ENSG00000058453	CROCC	protein_coding	Intergenic	.	.	Alu	0.619048
1	17414366	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.230769
1	17414889	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.25
1	17414892	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.25
1	17414893	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.25
1	17415531	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.153846
1	17415548	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.133333
1	19215243	A->G	-	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.2
1	19299645	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
1	19474056	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.181818
1	19474134	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.2
1	19598985	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.117647
1	19599292	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.272727
1	19599309	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.416667
1	20647921	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.142857
1	20756763	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	20756991	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.142857
1	20775410	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.533333
1	20784108	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20938027	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.272727
1	21153667	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21155613	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21168649	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.272727
1	22057747	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.2
1	22063800	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.125
1	22076219	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.230769
1	22083447	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.545455
1	23968743	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	26559428	A->G	+	ENSG00000117676	RPS6KA1	protein_coding	Intergenic	.	.	Alu	0.454545
1	26704589	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.9
1	26704654	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	27627998	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.133333
1	27628011	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.133333
1	27874149	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3
1	27874219	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.238095
1	27874244	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.535714
1	27874255	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.307692
1	27874270	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27874297	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27874303	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.4
1	27874372	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.173913
1	27874385	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1
1	27874386	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.16129
1	27874455	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	27874526	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.5
1	27874527	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27874553	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
1	27874617	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27874639	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.230769
1	27874833	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0416667
1	27874851	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0754717
1	27874860	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0338983
1	27874861	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0483871
1	27874873	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0967742
1	27874876	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.114754
1	27875840	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.210526
1	27875949	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0697674
1	27875964	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27876087	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27880215	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27880240	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27880241	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.642857
1	27880253	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.214286
1	27880447	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.25
1	27880531	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.12
1	27880666	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.111111
1	27880676	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.111111
1	27880829	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.105263
1	27880832	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.15
1	29175291	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
1	29175305	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.230769
1	30743975	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.272727
1	30743982	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.3
1	30752945	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.166667
1	31933227	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intergenic	.	.	Alu	0.166667
1	31935946	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.181818
1	35182049	A->G	-	ENSG00000116560	SFPQ	protein_coding	Intergenic	.	.	Alu	0.057971
1	35735490	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0612245
1	35736052	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0625
1	35977505	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.133333
1	40377023	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0298507
1	40378241	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.266667
1	40378527	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.15
1	40378564	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	40402489	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.3
1	40402514	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	40402550	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	40402554	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	40402616	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	45659477	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.533333
1	45659479	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.133333
1	47368731	A->G	+	ENSG00000162368	CMPK1	protein_coding	Intergenic	.	.	Alu	0.142857
1	51245581	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51624021	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.2
1	62449024	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	66944909	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	77732905	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.181818
1	77950264	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.5
1	77953255	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	77970853	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	77971919	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.25
1	77971922	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.285714
1	88691138	A->G	+	ENSG00000065243	PKN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	89635925	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.419355
1	89643148	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.235294
1	89643169	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.214286
1	89643221	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.181818
1	89643231	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.130435
1	89643237	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.115385
1	89643303	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0625
1	89643343	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.142857
1	89643344	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.305556
1	89660333	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.15
1	89680660	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.25
1	89680661	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.166667
1	89996619	A->G	+	ENSG00000162664	ZNF326	protein_coding	Intergenic	.	.	Alu	0.153846
1	90965533	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.3
1	90970834	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.181818
1	90972037	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.3
1	90972038	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.15
1	90984342	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.176471
1	90984347	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.571429
1	91013172	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.142857
1	93157485	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.1
1	93263866	A->G	-	ENSG00000122483	CCDC18	protein_coding	Intergenic	.	.	Alu	0.3
1	97732287	A->G	-	ENSG00000188641	DPYD	protein_coding	Intergenic	.	.	Alu	0.105263
2	10793643	A->G	-	ENSG00000143870	PDIA6	protein_coding	Intergenic	.	.	Alu	0.2
2	16591498	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.222222
2	16592712	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.173913
2	16592847	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.6
2	16607652	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0869565
2	16607734	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.157895
2	16607735	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.135135
2	16607800	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0625
2	16611243	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.166667
2	16611256	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.166667
2	20268400	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20268401	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20271481	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.363636
2	20292867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.5
2	20343685	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20344284	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20344334	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.15
2	20345865	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	23773271	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.4
2	23773285	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23835324	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.5
2	23835328	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.5
2	24347862	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	26039804	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
2	26064792	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.166667
2	26238185	A->G	-	ENSG00000084754	HADHA	protein_coding	Intergenic	.	.	Alu	0.2
2	28758150	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28763903	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28785556	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28785557	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28785563	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28785583	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28786139	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.157895
2	28786144	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28786194	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28789249	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.129032
2	28789257	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28789291	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.266667
2	28789292	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28789464	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28789808	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28789834	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28790009	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28790017	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28790031	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28790066	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28790133	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28790206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28790213	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.238095
2	28790238	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28790271	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28790433	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.117647
2	28790601	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28790602	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	31943102	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	32362580	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
2	32368683	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32368721	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.111111
2	32368726	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.1875
2	32368769	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32396853	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32505948	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.08
2	32507252	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32508813	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.230769
2	32509484	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32579582	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	36583222	A->G	-	ENSG00000171055	FEZ2	protein_coding	Intergenic	.	.	Alu	0.3
2	36583223	A->G	-	ENSG00000171055	FEZ2	protein_coding	Intergenic	.	.	Alu	0.8
2	38582487	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.181818
2	38582488	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.25
2	38582490	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.307692
2	38582491	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.272727
2	38582494	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.363636
2	38582505	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.461538
2	39775059	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.2
2	39775062	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.4
2	40232099	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.727273
2	40322401	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	40332088	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	40334046	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.2
2	42192520	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	44353943	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.2
2	45682716	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.25
2	45682761	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.105263
2	45682825	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.2
2	47880160	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47881195	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47893033	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47893043	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	48359420	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.3
2	48368420	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.2
2	48368463	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.384615
2	53890964	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53899755	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.4
2	53899756	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53905706	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.272727
2	54984909	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.333333
2	54992121	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.111111
2	55011184	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.2
2	55011286	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	55011306	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	55020791	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.117647
2	60903805	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.222222
2	60903869	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.428571
2	60903876	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.15
2	60904217	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.333333
2	60904225	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60904783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.142857
2	60909692	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.166667
2	60934753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
2	60934761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	60934762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	60934775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
2	60935425	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
2	60935446	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
2	60935459	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
2	60935511	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	60935519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
2	60935521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	60935533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
2	60935535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
2	60935854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
2	61112598	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intergenic	.	.	Alu	0.166667
2	61141147	A->G	-	ENSG00000274769	AC016747.4	processed_transcript	Intergenic	.	.	Alu	0.333333
2	61293906	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61490323	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61490336	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61505567	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61505575	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61509035	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.4
2	61509098	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.636364
2	61509112	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61509134	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61509139	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61509423	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61509461	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.117647
2	61509478	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.409091
2	61509544	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.307692
2	61509619	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61509621	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.545455
2	61510054	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.125
2	61510063	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.111111
2	61510097	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61510233	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61510719	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61512806	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61512823	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61512893	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61512919	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.363636
2	61513223	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.230769
2	61513439	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61513934	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61513950	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.375
2	61514445	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61517014	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61517019	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61517041	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61517366	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.357143
2	61517414	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.105263
2	61517469	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.285714
2	61517473	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61518217	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61519435	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	61527235	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61527252	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61527483	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.4
2	64136795	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0967742
2	64136896	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	64138192	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0512821
2	64138195	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0540541
2	64138226	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.16129
2	64530036	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.272727
2	65091674	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65091690	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3
2	65091693	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65092213	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.384615
2	65094108	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65094139	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65094189	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65094197	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.12
2	65094212	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.470588
2	65094422	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.222222
2	65094428	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.45
2	65094472	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.130435
2	65095254	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65095488	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.307692
2	65095846	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65096191	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65096232	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65108639	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65108640	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65118589	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65123047	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	1
2	65123623	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0869565
2	65123646	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	65123658	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65123660	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65123686	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	65123702	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.210526
2	65230673	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.2
2	65230679	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.833333
2	65230799	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.315789
2	65230804	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65230825	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.142857
2	65230889	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.166667
2	65230895	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.214286
2	65230898	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.166667
2	65233112	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.181818
2	66559936	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.4
2	66559997	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.3
2	68208034	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.181818
2	68209519	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.142857
2	68209570	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	68212219	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.166667
2	68786058	A->G	+	ENSG00000163219	ARHGAP25	protein_coding	Intergenic	.	.	Alu	0.5
2	69928974	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.266667
2	69929011	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.166667
2	74171652	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	85323150	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.230769
2	85323186	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.25
2	85323374	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.636364
2	85323400	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.272727
2	85323411	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.3
2	85627190	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.214286
2	85627196	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.166667
2	85627197	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.166667
2	86446873	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.272727
2	86446945	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.230769
2	86447074	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.142857
2	86447086	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.307692
2	87050761	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
2	87050780	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
2	87050860	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
2	87460372	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.333333
2	88595044	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.2
2	88595077	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.2
2	95825441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
2	97828089	A->G	+	ENSG00000075568	TMEM131	protein_coding	Intergenic	.	.	Alu	1
2	99401626	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.181818
3	10143547	A->G	+	ENSG00000134086	VHL	protein_coding	Intergenic	.	.	Alu	0.2
3	10152289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0246914
3	10152524	A->G	+	.	.	.	Intergenic	.	.	Alu	0.714286
3	10152543	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10153038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153228	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0266667
3	11467476	A->G	+	ENSG00000197548	ATG7	protein_coding	Intergenic	.	.	Alu	0.181818
3	12998800	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.222222
3	12998839	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.2
3	12998914	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.642857
3	12998917	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.615385
3	12999731	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.363636
3	12999732	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.818182
3	13002021	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.3
3	13002028	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	13002037	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.642857
3	13002042	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.5
3	15410819	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.2
3	15773539	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.135135
3	15773542	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.171429
3	15773543	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0555556
3	15773613	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0952381
3	19951544	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23249838	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.3
3	23838167	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23838171	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.7
3	23848310	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23848318	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	37173076	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.125
3	37173341	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.4
3	37249479	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.272727
3	37251764	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	37251796	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.363636
3	37252972	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.153846
3	39063681	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.785714
3	39063798	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.2
3	39063801	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.2
3	39064392	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.272727
3	39064414	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.4
3	39064440	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.2
3	39064455	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.166667
3	39409295	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.416667
3	39409301	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.214286
3	39409343	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.181818
3	39409382	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.2
3	39409399	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.2
3	41210267	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	41210307	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.1
3	41210360	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.142857
3	41210374	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.461538
3	41210375	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.230769
3	41210821	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.2
3	41210902	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.428571
3	41210929	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.176471
3	41210982	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.12
3	42068401	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	47146838	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.2
3	47687706	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.181818
3	48691598	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48691667	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.333333
3	48691716	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48925524	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.117647
3	48933727	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0645161
3	49064917	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.454545
3	49066128	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.4
3	49321931	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49322739	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49322805	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.416667
3	49326469	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49326472	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49343227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	49343230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
3	49344065	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	49344170	A->G	-	.	.	.	Intergenic	.	.	Alu	0.421053
3	49344558	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
3	50093089	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50093091	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3
3	50095012	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50095014	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50095055	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50095071	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.105263
3	50095122	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50096234	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50098704	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	53317616	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.307692
3	53864003	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.0869565
3	53864065	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.0909091
3	53864073	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.1
3	53864096	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.304348
3	53864102	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.684211
3	53864134	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.176471
3	53864475	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.5
3	53866646	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
3	57274619	A->G	+	ENSG00000239388	ASB14	protein_coding	Intergenic	.	.	Alu	0.133333
3	57274632	A->G	+	ENSG00000239388	ASB14	protein_coding	Intergenic	.	.	Alu	0.133333
3	57592296	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57594086	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3
3	57850887	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.181818
3	58426565	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
3	58426566	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	58426570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	58426621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	58427105	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	58427125	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	58427128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	58427129	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	58427425	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	58427426	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	58427528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.578947
3	58427533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.473684
3	58427534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	58427541	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	67631411	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.3
3	67632261	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.2
3	67642400	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.181818
3	71292413	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.157895
3	71578263	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.3
3	71578298	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.25
3	71778006	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.2
3	71778014	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.142857
3	72435210	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.2
3	72436098	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.208333
3	72436099	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.125
3	72439938	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.3
3	72440089	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.285714
3	73001388	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.181818
3	73002331	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.166667
3	73002351	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.285714
3	73005145	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.5
4	15038841	A->G	+	ENSG00000137449	CPEB2	protein_coding	Intergenic	.	.	Alu	0.142857
4	15619101	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.181818
4	15619149	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.2
4	15635528	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.105263
4	15640071	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.272727
4	15640117	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.2
4	15640132	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.25
4	15641782	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.272727
4	15641783	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.454545
4	15641810	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.181818
4	15728771	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.384615
4	15728833	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	15728837	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.238095
4	15728855	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	15728866	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.310345
4	16220566	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.153846
4	16220586	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.176471
4	16220637	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.333333
4	16220654	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.1875
4	16220933	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.333333
4	16220942	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.333333
4	16221238	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.1875
4	16221242	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.133333
4	16221290	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.2
4	16221304	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.2
4	26329193	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.25
4	26336570	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.2
4	26379838	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.2
4	26871783	A->G	+	ENSG00000109689	STIM2	protein_coding	Intergenic	.	.	Alu	0.266667
4	37683591	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.142857
4	37864018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
4	37864040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
4	37864495	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
4	37864519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
4	37864601	A->G	+	.	.	.	Intergenic	.	.	Alu	0.588235
4	37864618	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
4	37864652	A->G	+	.	.	.	Intergenic	.	.	Alu	0.565217
4	37864657	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
4	37864670	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
4	37864686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.733333
4	37869527	A->G	+	ENSG00000249863	AC021106.1	processed_pseudogene	Intergenic	.	.	Alu	0.4
4	37869535	A->G	+	ENSG00000249863	AC021106.1	processed_pseudogene	Intergenic	.	.	Alu	0.2
4	37871118	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
4	37872121	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
4	37872124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
4	37872137	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
4	38788759	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
4	40530849	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.2
4	40551731	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.4
4	40595643	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.133333
4	40595670	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.117647
4	40604390	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.181818
4	43673588	A->G	+	.	.	.	Intergenic	.	.	Alu	1
4	54040538	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.4
4	67517238	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.3
4	67517300	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.176471
4	67517308	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.375
4	67517326	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.4375
4	67517389	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.2
4	67517621	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.166667
4	67517774	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.181818
4	67698903	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.3
4	68317038	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.08
4	68317210	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.166667
4	68327205	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.266667
4	68327233	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.318182
4	68335937	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.363636
4	75916912	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0491803
4	75917007	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0408163
4	77059595	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.214286
4	77068095	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.2
4	79954245	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.230769
4	79954269	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.230769
4	79954270	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.416667
4	80019147	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.263158
4	80037263	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.545455
4	80041761	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.208333
4	80041808	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.210526
4	80041809	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.166667
4	81466337	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.6
4	84964772	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.272727
4	84964773	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.545455
4	87020691	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0666667
4	87023092	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
4	87052158	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.157895
4	87072185	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.3
4	87072213	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
4	87072793	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	87084357	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.416667
4	87085819	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	87085856	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.272727
4	98885685	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.272727
5	10359885	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
5	10360316	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.142857
5	14715311	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.5
5	14716224	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.272727
5	17234083	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	17246925	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	32165461	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.142857
5	32165471	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.176471
5	32167444	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.153846
5	32167904	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.153846
5	32384899	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.6
5	34219917	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
5	44815566	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.166667
5	44815573	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.416667
5	44816303	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.176471
5	44816304	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.411765
5	44816330	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.153846
5	44816349	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.166667
5	44816387	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.133333
5	50414307	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.214286
5	50414333	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.266667
5	50414352	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.5
5	50732794	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.166667
5	56840993	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.333333
5	59573747	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.2
5	60873430	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
5	60873509	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	66148662	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.272727
5	68236456	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.153846
5	68240633	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	1
5	70121953	A->G	-	ENSG00000179978	AC140134.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
5	72853178	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72853226	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.230769
5	72890958	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.153846
5	72890993	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.3
5	80544605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
5	83501273	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.0930233
5	83514507	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.166667
5	83514515	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.285714
5	83514520	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.230769
5	83514525	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.133333
5	83514578	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.117647
5	83514639	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.1
5	83514659	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.315789
5	83514668	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.125
5	83515977	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.272727
5	83516045	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.8
5	83516085	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.357143
5	83516234	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.166667
5	83516268	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.153846
5	83516271	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.615385
5	83516272	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.2
5	83574605	A->G	+	ENSG00000249835	VCAN-AS1	antisense	Intergenic	.	.	Alu	0.357143
5	94045019	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.272727
5	94045024	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.3
5	95007215	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.3
5	95923125	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.125
5	96664476	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.272727
5	96664525	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.153846
5	96713914	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.363636
5	96713925	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.153846
5	96713949	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.2
5	96724310	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.25
5	96724712	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.2
5	98891136	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98891145	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	98891146	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	98891619	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98891628	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98891654	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98894933	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.105263
5	98895000	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98895003	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98895605	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98895670	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	98896083	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	98918660	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.230769
5	98923445	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98923536	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.3
5	98923592	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98923999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98924150	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	98924161	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98924199	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.130435
5	98924215	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.176471
5	98924245	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.176471
6	15251086	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0961538
6	15251092	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0384615
6	15251129	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0816327
6	15251141	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.116279
6	15251151	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15251178	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.208333
6	15251216	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15251218	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.333333
6	15251813	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15251816	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15251857	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15251858	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.185185
6	15251903	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	15255234	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0645161
6	15255285	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.103448
6	15255288	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.266667
6	15255345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	15255355	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.269231
6	15258522	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	15258529	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15262642	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.3
6	15262771	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0588235
6	15270237	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15270250	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.230769
6	15270312	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15270762	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15270826	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15271555	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15271576	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.107143
6	15271577	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	15273650	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15273651	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0681818
6	15274029	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.115385
6	15277376	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15279040	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15282019	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15285175	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15285190	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15285191	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15286284	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.5
6	15286381	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15286994	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.235294
6	15286995	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.235294
6	15289595	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15290784	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15290802	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.272727
6	15290805	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.416667
6	15290822	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15290977	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.32
6	15291027	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.666667
6	15291052	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.6
6	15291055	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15291083	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15291084	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15291089	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15291192	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.12766
6	15291214	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15292726	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15293329	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15294249	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15294257	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15295226	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15295373	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	15302269	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.4
6	15302345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.241379
6	15302835	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15302900	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15306603	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	15307322	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.461538
6	15307340	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15
6	15307352	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.388889
6	15307403	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1875
6	15307408	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15307423	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.722222
6	15307479	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15307480	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.210526
6	15323664	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.185185
6	15323748	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15324577	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15331679	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15331745	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15335125	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.208333
6	15335153	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.192308
6	15335155	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.115385
6	15335241	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15335979	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0882353
6	15335987	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0810811
6	15340072	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	15376617	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15376639	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.217391
6	15376649	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.136364
6	15392765	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15394453	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15417480	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15417537	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.230769
6	15417597	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15418398	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15418413	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.235294
6	15424203	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15428786	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15429321	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15429340	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15429343	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.285714
6	15429366	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15429405	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.214286
6	15432253	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15432270	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15455555	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	16734562	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.181818
6	16735784	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.25
6	17659575	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.2
6	17659624	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17659652	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.153846
6	18409688	A->G	+	ENSG00000137393	RNF144B	protein_coding	Intergenic	.	.	Alu	0.272727
6	18409735	A->G	+	ENSG00000137393	RNF144B	protein_coding	Intergenic	.	.	Alu	0.2
6	24710868	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.2
6	25964911	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.2
6	25976505	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.181818
6	25976506	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.181818
6	26125804	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.181818
6	29943642	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intergenic	.	.	Alu	1
6	30200165	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.3
6	30200225	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.363636
6	30200276	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.454545
6	31855694	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	32577900	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
6	32578133	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	32580495	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	0.384615
6	32582064	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	1
6	32588017	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	0.909091
6	33261249	A->G	-	ENSG00000223501	VPS52	protein_coding	Intergenic	.	.	Alu	0.142857
6	35571149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
6	35571278	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
6	35571331	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	35571338	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
6	35572427	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	35572520	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	35572521	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
6	35572552	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	35572557	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	35572598	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
6	35572600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	35648783	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.666667
6	35661261	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35670483	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.176471
6	35670499	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.157895
6	35670610	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35670675	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35670688	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35671115	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35671116	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35671119	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35671120	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35671207	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.117647
6	35671212	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1875
6	35672691	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0789474
6	35677922	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35683267	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35683304	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.384615
6	35683348	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35683372	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.230769
6	35683972	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.130435
6	35684016	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.222222
6	35684050	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.538462
6	35685042	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.133333
6	36446730	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.454545
6	36543664	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36543906	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.214286
6	36543907	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.142857
6	36544868	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.153846
6	36544869	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.166667
6	36545033	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36682189	A->G	+	ENSG00000124762	CDKN1A	protein_coding	Intergenic	.	.	Alu	0.130435
6	36974909	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.666667
6	37857043	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	37892336	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
6	38561815	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.5
6	41278153	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.129032
6	41278201	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0625
6	41278221	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0588235
6	41278410	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0434783
6	41278448	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0769231
6	41278465	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0588235
6	41278505	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.15
6	41278513	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0909091
6	41278541	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.238095
6	41278549	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.125
6	41278561	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.08
6	41278564	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0769231
6	41278565	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.307692
6	42940220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
6	42940227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
6	42940232	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
6	42941282	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42941364	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0769231
6	42941381	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42941390	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.115385
6	42941416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0810811
6	42941811	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.285714
6	42941898	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0625
6	42941946	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0645161
6	42941982	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0588235
6	42942008	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0588235
6	42942067	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.157895
6	42942187	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.230769
6	42942211	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.181818
6	42942440	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.3
6	42942878	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0666667
6	42942902	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0377358
6	42943354	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.05
6	42943374	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0645161
6	43029689	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.133333
6	43029778	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.166667
6	43029794	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.117647
6	43030303	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.09375
6	43030364	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.136364
6	43030379	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.130435
6	43030389	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.142857
6	43030404	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.166667
6	43030405	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.208333
6	43030406	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.125
6	43030409	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0833333
6	43030479	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.222222
6	43030513	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0952381
6	43030708	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0909091
6	43030710	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1
6	43030712	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.15
6	43030973	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.185185
6	43031206	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
6	43032331	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3
6	43032334	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3
6	43032476	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.117647
6	43032486	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.25
6	43032534	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43033092	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
6	45465735	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.214286
6	45465748	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.583333
6	45465765	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.2
6	45465868	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.2
6	57056682	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
6	63675261	A->G	+	ENSG00000118482	PHF3	protein_coding	Intergenic	.	.	Alu	0.307692
6	63675329	A->G	+	ENSG00000118482	PHF3	protein_coding	Intergenic	.	.	Alu	0.454545
6	72734402	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.4
6	72806376	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.25
6	72806433	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.25
6	75636966	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75636967	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75636981	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	85633544	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.25
6	85633553	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.166667
6	87159740	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.333333
6	87159741	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.333333
6	87159753	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87167530	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.4
6	87175436	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.181818
6	87238311	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.272727
6	87673719	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	87673741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	87673758	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
6	87682846	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	87682847	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	87682848	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	87683891	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.153846
6	87683919	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.181818
6	87683927	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.181818
6	87688048	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.230769
6	87688286	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.3
6	87688325	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.363636
6	87688326	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.2
6	87688583	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.2
6	87688655	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.277778
6	87688707	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.214286
6	99404876	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.166667
6	99404889	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.230769
6	99405343	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.272727
6	99405355	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.461538
6	99405773	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.266667
6	99405775	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.1875
6	99418336	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.2
6	99421732	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.176471
7	23187867	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.142857
7	23187868	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.142857
7	23188586	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.1875
7	23189432	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.3125
7	23508384	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23509840	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.230769
7	23512359	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.909091
7	23512360	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.6
7	23512372	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.272727
7	23518077	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23518158	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.307692
7	25119489	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	29275117	A->G	+	ENSG00000285162	AC004593.3	protein_coding	Intergenic	.	.	Alu	0.3
7	30141786	A->G	+	ENSG00000180354	MTURN	protein_coding	Intergenic	.	.	Alu	0.272727
7	32876894	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.181818
7	43597482	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.363636
7	44625152	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.416667
7	44625893	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.181818
7	44625912	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.8
7	44830818	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0833333
7	44831055	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0555556
7	44831091	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0246914
7	44831110	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44833309	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0363636
7	44833335	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0769231
7	44833632	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.026087
7	48088169	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	48092591	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.217391
7	48094307	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	48094314	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.25
7	48094342	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.133333
7	48094345	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.133333
7	48094381	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.4
7	55454394	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.3
7	55454933	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.25
7	55455212	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.368421
7	55455223	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.294118
7	55455279	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.526316
7	55455407	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.3
7	55456232	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.352941
7	55456243	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.1875
7	55457996	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.2
7	55458080	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.272727
7	55458436	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.214286
7	55458487	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.384615
7	66154716	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.5
7	66154721	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66155291	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66155673	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.6
7	66155739	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.166667
7	66155747	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.333333
7	66155772	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.222222
7	66155789	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66155798	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.214286
7	66155799	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.142857
7	66155811	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.416667
7	66157116	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66157117	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66157520	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.6
7	66157563	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.333333
7	66157565	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66157735	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66685421	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66743840	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66743908	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0909091
7	66744153	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66744955	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66745511	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66745512	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66745591	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66746403	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66746404	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.214286
7	66751959	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0909091
7	66751995	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66754482	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	73007014	A->G	+	ENSG00000229018	PMS2P7	unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	73007016	A->G	+	ENSG00000229018	PMS2P7	unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	73007017	A->G	+	ENSG00000229018	PMS2P7	unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
7	73538557	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.2
7	73538579	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.363636
7	74187246	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.272727
7	74880945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	75883366	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.2
7	90626730	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.181818
7	92830593	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.461538
7	99125305	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.2
7	99125306	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.2
7	99130194	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.153846
7	99496853	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.117647
7	99497453	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.307692
7	99497619	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0869565
7	99497620	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0869565
7	99497629	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.105263
7	99497810	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.782609
7	99497848	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.230769
7	99568668	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.3
7	99569046	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.2
8	11822611	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.285714
8	11822623	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.277778
8	11822624	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.222222
8	11822632	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.117647
8	11822653	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.153846
8	11822716	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.153846
8	11822742	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.272727
8	11850175	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.181818
8	11851805	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.272727
8	11851868	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.583333
8	11851870	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.153846
8	11852125	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11857126	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11857249	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.125
8	11857260	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.25
8	11857264	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.294118
8	11857320	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.214286
8	17975372	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	17975377	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.454545
8	22106235	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
8	22633213	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.428571
8	22633225	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.214286
8	22633226	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.142857
8	23067013	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.3
8	23067014	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.3
8	23188285	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
8	23188321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
8	23188325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
8	23188805	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
8	23188806	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8
8	23188856	A->G	-	.	.	.	Intergenic	.	.	Alu	0.352941
8	23188960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.764706
8	23189005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
8	23189019	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
8	23189046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
8	23189062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
8	23189109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.30303
8	25186944	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.133333
8	25186945	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.2
8	25186971	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25187062	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25187115	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.461538
8	26309122	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.2
8	26313134	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.272727
8	26386568	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.157895
8	26386604	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.1
8	27332682	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.125
8	27335379	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.117647
8	27335403	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.133333
8	27335445	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.117647
8	27335489	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.2
8	27335513	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.2
8	27341732	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.285714
8	27341813	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.142857
8	27341815	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.214286
8	27342318	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.1875
8	27344986	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.166667
8	27345107	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.25
8	27383429	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.181818
8	27401832	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.176471
8	27402846	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.166667
8	27402847	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.222222
8	30081530	A->G	-	ENSG00000133872	SARAF	protein_coding	Intergenic	.	.	Alu	1
8	37866091	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	37869010	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	37875969	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.117647
8	37876083	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.117647
8	37879823	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.25
8	37879842	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	37880702	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	37887448	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	37887468	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.16129
8	37889856	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	37889869	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.344828
8	37889880	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	37889889	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	37889948	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	37890718	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.137931
8	37890723	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.419355
8	37890728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	37890729	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.21875
8	37893602	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.05
8	37893666	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0555556
8	37893678	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0377358
8	37893774	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.159091
8	37893782	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.181818
8	37896093	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.125
8	37896118	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.214286
8	37896224	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.105263
8	37896227	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	37896284	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.230769
8	37898319	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.153846
8	38213837	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38213862	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38217497	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
8	38217499	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
8	38217501	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38217503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
8	38217516	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
8	38217588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
8	38217594	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	38217603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	38808624	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.2
8	38831696	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	38837458	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.2
8	39020036	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.333333
8	39020074	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.181818
8	39020077	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.363636
8	39021302	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.285714
8	39051499	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.3
8	43124600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
8	43130031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	52696908	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.105263
8	52696917	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52696919	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	52696927	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.105263
8	52700302	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52700303	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.285714
8	52700306	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52700307	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.214286
8	52700319	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52706551	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.636364
8	52708910	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.6
8	52708991	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.3
8	55886294	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55889049	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55889098	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.05
8	55889111	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.102564
8	55889212	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0882353
8	55889431	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55890805	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55890827	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
8	55890893	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55890918	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55890943	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55891166	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.111111
8	55892181	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.233333
8	55892238	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0625
8	55892293	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0625
8	55892299	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0571429
8	55892341	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.09375
8	55894487	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0769231
8	55894755	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0740741
8	55895035	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0540541
8	55895079	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0363636
8	55895101	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0588235
8	55895526	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0909091
8	55895528	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.176471
8	55895534	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.117647
8	55897650	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.264706
8	55897656	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0606061
8	55897657	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55897705	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.190476
8	55897721	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.6
8	55897730	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.277778
8	55897766	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55897792	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55897802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.384615
8	55897806	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55897833	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55897854	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55898314	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55898430	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55898498	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55899750	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55899776	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55899779	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55899909	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55900617	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.210526
8	55900643	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55902428	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.111111
8	55903051	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55903245	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55903745	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.227273
8	55903752	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55903780	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55903785	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.16
8	55903832	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55903869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55905326	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55906370	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55906372	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55907676	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55907685	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55907702	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55908386	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55908410	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55908445	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55908454	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55908473	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55908479	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0714286
8	55916915	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.45
8	55916922	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.263158
8	55917092	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55917327	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55922121	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.315789
8	55922165	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55922191	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.375
8	55922192	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55922205	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55922227	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55922304	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55922342	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.266667
8	55925014	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55925022	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55927742	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55927768	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55927775	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55928171	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55932601	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55934178	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55965969	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55965978	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.111111
8	55965982	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55965998	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55966005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.210526
8	55966037	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55966074	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55966075	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55966088	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.363636
8	55966471	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55966507	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55966573	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55966611	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55966630	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55969110	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55969260	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55987184	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55987193	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55987251	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55987257	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55987260	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55987266	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	58657906	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.470588
8	58658582	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.411765
8	60525183	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.25
8	60525187	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.363636
8	60528795	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0909091
8	60528827	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0689655
8	60532730	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60532745	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60533761	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.307692
8	60533769	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.307692
8	60533770	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60533876	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.272727
8	60537351	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.111111
8	60537404	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	60540536	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.25
8	60557258	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60557306	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.142857
8	60557665	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.461538
8	60557667	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60557692	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.25
8	60557695	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.545455
8	60588063	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.142857
8	60590406	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.266667
8	70578303	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.272727
8	70578307	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.2
8	70578455	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.133333
8	73970201	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.133333
8	89781436	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.105263
8	89781466	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.12
8	89781467	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.08
8	89782004	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	89782009	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.142857
8	89782060	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.222222
8	89782075	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	89782527	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.111111
8	89782573	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.107143
8	97654844	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
8	97728927	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
8	97729161	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0461538
8	97729187	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0263158
8	97729680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.078125
8	97729682	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
8	97729731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.025974
9	19120293	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.0909091
9	19125308	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.0444444
9	33035149	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	33035225	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.4
9	33035228	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.2
9	33035307	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.2
9	33035650	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.307692
9	33035669	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.363636
9	33035730	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.142857
9	33038144	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.125
9	33822699	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.181818
9	34182008	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	34182046	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34183827	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.3
9	34184031	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34191335	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.25
9	34191344	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	34192105	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	34192106	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.1875
9	34192109	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	34201402	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intergenic	.	.	Alu	0.277778
9	34205035	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	34218858	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	35696387	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	37161053	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.3
9	37161062	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.7
9	37505576	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	37505639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	37885554	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.2
9	62818376	A->G	-	.	.	.	Intergenic	.	.	Alu	0.820513
9	70304589	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.2
9	73154578	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.078125
9	76461624	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.153846
9	76461746	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	76461782	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.103448
9	76461828	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.121212
9	76464477	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.125
9	76464491	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.133333
9	77874667	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77874880	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.454545
9	77874893	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
9	77874900	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.333333
9	77881517	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.636364
9	77881538	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.25
9	77881546	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.4
9	77881547	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77881561	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77992940	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77994071	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77995723	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.272727
9	78014547	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	83673940	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.157895
9	83674026	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	83704570	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	83704576	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.384615
9	83919678	A->G	-	ENSG00000165115	KIF27	protein_coding	Intergenic	.	.	Alu	0.0697674
9	85543890	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	85543896	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	85543976	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	85543995	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	85544066	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
9	85544067	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
9	85544538	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
9	85724211	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	85731552	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.1
9	91292439	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.181818
9	91292458	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.210526
9	91294306	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.0869565
9	91353650	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.3
9	92430617	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.2
9	92430618	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.2
9	93444753	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
9	98067202	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.454545
10	11174983	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	11174987	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.1
10	11177201	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.114286
10	11177204	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.142857
10	11177205	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0810811
10	11239804	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.131579
10	11239853	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.128205
10	11239859	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0512821
10	11239889	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	11239911	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.2
10	11239954	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.263158
10	11239978	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	11240041	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.107143
10	11241239	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.571429
10	11241389	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.7
10	11583946	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.2
10	14580248	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.181818
10	14582582	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.153846
10	14582649	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.190476
10	14582658	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.555556
10	14594289	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.142857
10	14599558	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0434783
10	14599581	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0769231
10	14599637	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.111111
10	17318746	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.206897
10	17318764	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17318792	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.226415
10	17318820	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.12963
10	17318822	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.34
10	17318825	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.06
10	17319174	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.262295
10	17319244	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.151515
10	17319247	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.111111
10	17319254	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.205882
10	17319255	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.205882
10	17319294	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.78125
10	17319306	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.153846
10	17492435	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
10	17492439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
10	17492440	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
10	17492448	A->G	-	.	.	.	Intergenic	.	.	Alu	0.578947
10	17492480	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	17492484	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
10	17492752	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
10	17492762	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
10	17537063	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
10	17686339	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0882353
10	17686446	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.652174
10	17686454	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0833333
10	17686476	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17686477	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17686516	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.615385
10	17686551	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.2
10	17686639	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.384615
10	17686651	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.846154
10	19846795	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.235294
10	19846922	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.272727
10	21541749	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.2
10	21871814	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21875849	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.545455
10	21877174	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21877191	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21877198	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.230769
10	21900260	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21900267	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21907726	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.25
10	21907780	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.363636
10	21947060	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21952828	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.157895
10	21959222	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.266667
10	21959235	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21959262	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.5625
10	21959664	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21959674	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	21960539	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21960563	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.142857
10	21967272	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.259259
10	21968675	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.142857
10	21969019	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.08
10	21969020	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.125
10	21969041	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.647059
10	21969069	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	21969137	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.318182
10	21969141	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.388889
10	21969142	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.111111
10	21985696	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.230769
10	26449755	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.272727
10	26466529	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.166667
10	26466697	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.2
10	26760627	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.15
10	26760645	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26760646	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.133333
10	26760673	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26760707	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.272727
10	26760727	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.307692
10	26760766	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.4375
10	26760790	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	26760832	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0909091
10	26760867	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.166667
10	26761083	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.454545
10	26761121	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.105263
10	26761122	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.105263
10	26761124	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.176471
10	26761141	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.6875
10	26761195	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.272727
10	26761217	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.636364
10	26772953	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.214286
10	26772977	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26821040	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.166667
10	26821063	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.333333
10	27126192	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.333333
10	27126198	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.3125
10	27126217	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.1875
10	27126277	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.2
10	27141313	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	28525130	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.4
10	28525238	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.333333
10	28525248	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.111111
10	28525277	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.5
10	28525278	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.291667
10	28525313	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.125
10	28539557	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.3
10	28544057	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28544092	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28544135	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.08
10	28564184	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.4375
10	28564207	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.210526
10	28579308	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.4
10	29459866	A->G	+	ENSG00000224597	SVIL-AS1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
10	43146627	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.153846
10	43149882	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	45728072	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.818182
10	45728079	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.307692
10	45728153	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.142857
10	45728282	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.1875
10	45728303	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.227273
10	45728306	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.181818
10	49946028	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.181818
10	58252724	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.272727
10	58345414	A->G	+	ENSG00000072401	UBE2D1	protein_coding	Intergenic	.	.	Alu	0.5
10	59893364	A->G	-	ENSG00000108091	CCDC6	protein_coding	Intergenic	.	.	Alu	0.2
10	63178160	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63179570	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.272727
10	63179585	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63231672	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63231678	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.307692
10	63250264	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63259994	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.15
10	63261332	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0769231
10	63261335	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.115385
10	63261468	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.615385
10	63261469	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	63261498	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0909091
10	63261529	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.368421
10	63261537	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.105263
10	67886126	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67886128	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67886428	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.454545
10	67890626	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.272727
10	68525527	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.4
10	69094644	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0555556
10	69094645	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0588235
10	69094689	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.05
10	69094692	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.105263
10	69097341	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0952381
10	69098813	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.125
10	69098823	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0952381
10	69099375	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0606061
10	69099418	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.142857
10	69099567	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0612245
10	69099969	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.1
10	69100045	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0740741
10	69100056	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0769231
10	69100098	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.206897
10	69100099	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.15625
10	69100339	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0888889
10	69103123	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.08
10	69103137	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0714286
10	69103140	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0882353
10	69103201	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.103448
10	69103213	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0571429
10	70168532	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.157895
10	71758771	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.0909091
10	71758835	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.0714286
10	71759310	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.2
10	71759398	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.115385
10	71759399	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.0740741
10	71759455	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.105263
10	71759584	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.272727
10	72297120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
10	73776271	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.133333
10	73776354	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.266667
10	73776428	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.181818
10	73776436	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.866667
10	73776437	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.133333
10	73776443	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.125
10	73776518	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.142857
10	73776526	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.357143
10	73776527	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.357143
10	73776534	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.818182
10	73776953	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.125
10	73777624	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.25
10	73777829	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.1
10	73777908	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.3
10	73778099	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.142857
10	75444975	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.538462
10	75445022	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.45
10	75445030	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.105263
10	75445041	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.666667
10	75445046	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75445070	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.285714
10	75447811	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.142857
10	75456885	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.230769
10	75459254	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.3
10	75470272	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.142857
10	75477103	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.176471
10	75526166	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.3
10	75526575	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75526576	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.272727
10	75526643	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.7
10	75526793	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.4
10	75526804	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.307692
10	75590926	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75590964	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75615475	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.214286
10	75680828	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.111111
10	75690323	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.357143
10	75690345	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.266667
10	75691978	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75749338	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.333333
10	75808542	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.416667
10	79110828	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.4
10	79110829	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.4
10	80174441	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.2
10	80191113	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.384615
10	80191142	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.277778
10	80191143	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.117647
10	80199369	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.125
10	80199383	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.111111
10	80199571	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.142857
10	80199576	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.12
10	80199585	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.107143
10	80199623	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.210526
10	80200796	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.08
10	84147371	A->G	+	ENSG00000165678	GHITM	protein_coding	Intergenic	.	.	Alu	0.181818
10	87871595	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.1875
10	87871599	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.117647
10	87871763	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0952381
10	87871764	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0909091
10	87873095	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.157895
10	87873173	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.133333
10	87890921	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.125
10	87890959	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.136364
10	87895042	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.117647
10	89721410	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.4
10	91803359	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.3
10	91938733	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.105263
10	91942163	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.4375
10	91942204	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.105263
10	91949042	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.5
10	91949055	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.153846
10	91953511	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.5
10	91958129	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.3
10	91958446	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.4
10	91958447	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.2
10	94607744	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.153846
10	96563130	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.214286
10	96564224	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.125
10	96564230	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.1875
10	96578904	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.2
10	97374204	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.157895
10	97374212	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.45
10	97374246	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
10	97374306	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.384615
10	97394510	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.363636
10	97394671	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97394994	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97394995	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97397356	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.133333
10	97398491	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
11	11892709	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11892741	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	13682832	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.130435
11	13682833	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	13683137	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.4
11	13683299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	13683642	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.130435
11	13703284	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	16756370	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16756529	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.363636
11	16756543	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.16
11	16756559	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.105263
11	16756689	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0689655
11	16756695	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.225806
11	16756761	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.153846
11	17336958	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	18525104	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18525127	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.214286
11	33075484	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.214286
11	33263536	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33266652	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33267223	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33268150	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.363636
11	33268161	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33271340	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33271365	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33271409	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33271475	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33282208	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33866541	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.230769
11	34079242	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34079279	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
11	34079280	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.25
11	34094960	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.133333
11	34095009	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.272727
11	34440737	A->G	+	ENSG00000121691	CAT	protein_coding	Intergenic	.	.	Alu	0.214286
11	34449038	A->G	+	ENSG00000121691	CAT	protein_coding	Intergenic	.	.	Alu	0.565217
11	35187137	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.08
11	35187939	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0491803
11	35187940	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0819672
11	35216806	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.611111
11	35218725	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.3
11	35218790	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.157895
11	43323813	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.6
11	43857066	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.117647
11	43857072	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.210526
11	43860780	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.333333
11	43860783	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.2
11	45864682	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.5
11	45864980	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.333333
11	45864995	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47168659	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.416667
11	47168687	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47168705	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47170077	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.214286
11	47170145	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.272727
11	47170159	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.307692
11	47170238	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47362450	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.3
11	47373482	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47739808	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47740927	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47741200	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47741224	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.307692
11	47741333	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47741369	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.272727
11	47741401	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47741801	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.272727
11	47743469	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47765713	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47765731	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.333333
11	47986942	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.181818
11	60212581	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.166667
11	60227735	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.636364
11	60387729	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.363636
11	60387763	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.4
11	60387786	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.3
11	61473255	A->G	+	ENSG00000256591	AP003108.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	62828188	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.142857
11	62828207	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62828229	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62829808	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.117647
11	65772803	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	65772804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	65772880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	65772882	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	65772999	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	65774488	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0243902
11	65774527	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
11	65774586	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0204082
11	66631462	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66631752	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66633480	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66633484	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.214286
11	66648639	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66648660	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.214286
11	66648663	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.384615
11	66648667	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.357143
11	66648692	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66649172	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66649214	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.25
11	66649424	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.214286
11	66649470	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.235294
11	66649489	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	67138720	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.363636
11	67151878	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.214286
11	67153574	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.4
11	67153640	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3
11	67153708	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67682754	A->G	-	.	.	.	Intergenic	.	.	Alu	1
11	68045680	A->G	+	ENSG00000110719	TCIRG1	protein_coding	Intergenic	.	.	Alu	0.125
11	68087468	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.3
11	68088826	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.3
11	68096278	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.142857
11	68118389	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.272727
11	73387010	A->G	+	ENSG00000054967	RELT	protein_coding	Intergenic	.	.	Alu	0.0645161
11	73871182	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	75401424	A->G	+	ENSG00000149273	RPS3	protein_coding	Intergenic	.	.	Alu	0.2
11	78303611	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.176471
11	78330929	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.363636
11	78333342	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	78333428	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.3
11	78383220	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.230769
11	78388465	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.166667
11	78388536	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.2
11	78390368	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.0869565
11	78390383	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.333333
11	78390467	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.375
11	78390473	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.352941
11	78390477	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.25
11	78390542	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.454545
11	78406515	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.272727
11	78406526	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	78406560	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	85954743	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
11	85954748	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
11	85954755	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
11	85954756	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	85971619	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.166667
11	85971624	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.75
11	85971879	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.166667
11	85971958	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	85971959	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.416667
11	85971976	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.166667
11	85998009	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.272727
11	85998610	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.384615
11	86010577	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0909091
11	86055127	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.1
11	86055128	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.15
11	86055230	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.294118
11	86055247	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.125
11	88329370	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.3
12	10185662	A->G	-	ENSG00000165685	TMEM52B	protein_coding	Intergenic	.	.	Alu	0.181818
12	10216109	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	10216633	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	10216707	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.230769
12	10216774	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.153846
12	10217622	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.111111
12	11703056	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
12	11703057	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.235294
12	11704440	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.3
12	26972677	A->G	-	ENSG00000247903	AC024896.1	antisense	Intergenic	.	.	Alu	0.0588235
12	31993666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
12	31997767	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	42223085	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.363636
12	42223198	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.363636
12	42347660	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
12	45250534	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.2
12	45748171	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.142857
12	45748200	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.133333
12	53458171	A->G	+	ENSG00000257379	AC023509.1	processed_transcript	Intergenic	.	.	Alu	0.166667
12	55731617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
12	55731626	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
12	55778209	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.4
12	62285712	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.230769
12	62333406	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.3
12	62477027	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.272727
12	66194142	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0714286
12	66195759	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.3
12	66200997	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.125
12	68615437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68615438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68616510	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68616516	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68617795	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68617863	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0689655
12	68617864	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0666667
12	68619025	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68619087	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0888889
12	68622916	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68622927	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1875
12	68622953	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68622963	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68625666	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68625672	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68625801	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.15
12	68627919	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68627986	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68629056	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68632870	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68636869	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68636906	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68638842	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.173913
12	68638845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68644960	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.181818
12	68644961	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.272727
12	68817517	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.130435
12	68817530	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.583333
12	68817554	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68817564	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68817570	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0740741
12	68817573	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.24
12	68817574	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.08
12	68817628	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.310345
12	68817655	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.428571
12	68817700	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.5625
12	68817897	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.16
12	68817898	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.259259
12	68817927	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.1
12	68817937	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.133333
12	68817959	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0588235
12	68817968	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.314286
12	68817991	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.1
12	68817994	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.125
12	68818023	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0967742
12	68818033	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68818056	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	68818068	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0444444
12	68818967	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0487805
12	68821112	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821148	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68821152	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.173913
12	68821177	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.136364
12	68821213	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.583333
12	68821245	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.3125
12	68821306	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.176471
12	68821308	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.117647
12	68821445	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.176471
12	68821465	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821473	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.277778
12	68821481	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.842105
12	68821521	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68821544	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.117647
12	68821572	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821573	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68821586	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.25
12	68821616	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.266667
12	68821980	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.217391
12	68822010	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68832025	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.153846
12	69256102	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.6
12	70283380	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.153846
12	71616055	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.153846
12	71616163	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71657745	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1
12	71657771	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.285714
12	71657786	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71657823	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.307692
12	71657867	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
12	71658456	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.08
12	71658457	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0769231
12	71658561	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0740741
12	71658568	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.217391
12	71846900	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.3
12	71846901	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.4
12	71846994	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71846995	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.153846
12	71847530	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	76076831	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.272727
12	76079400	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.176471
12	76079902	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.25
12	76079919	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.105263
12	76080435	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.315789
12	76080506	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.230769
12	76550958	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.153846
12	76556694	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.16129
12	76556760	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.105263
12	76556764	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.1875
12	76556801	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76556802	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76556867	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.25
12	76556920	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.230769
12	76557397	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.285714
12	76557503	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.25
12	76557530	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.157895
12	76557532	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.571429
12	76557553	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.166667
12	79898447	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.166667
12	79910250	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.583333
12	79910307	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.181818
12	79924611	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.214286
12	79924656	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.181818
12	79924715	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.545455
12	79924718	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.25
12	79926952	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.272727
12	79926979	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.363636
12	79927004	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.166667
12	89642725	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.307692
12	89642783	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.153846
12	89642787	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.166667
12	89643827	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.117647
12	89643845	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.125
12	89643942	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.181818
12	89644039	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.142857
12	92128052	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.230769
12	92128076	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.142857
12	93428013	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.181818
12	93436377	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.181818
12	93437579	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.142857
12	93437580	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.142857
12	94991039	A->G	-	ENSG00000184752	NDUFA12	protein_coding	Intergenic	.	.	Alu	0.2
12	95001843	A->G	-	ENSG00000184752	NDUFA12	protein_coding	Intergenic	.	.	Alu	0.3
12	98451115	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
12	98451131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
12	98451174	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
12	98451181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
12	98451263	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
12	98451905	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
12	98451911	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	98451923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
12	98452281	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	98452287	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
12	98452321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
12	98452322	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
12	98453066	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
12	98652162	A->G	+	ENSG00000120868	APAF1	protein_coding	Intergenic	.	.	Alu	0.5
13	19710940	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.4
13	19711087	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.333333
13	19711749	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.375
13	19711781	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19717824	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19725967	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.15
13	21045008	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.153846
13	21146071	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.25
13	21400807	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.25
13	21400808	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.2
13	21400822	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.611111
13	21400848	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.142857
13	21400905	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.130435
13	21451953	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.2
13	21451955	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.3
13	24508693	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
13	24510309	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
13	24510311	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	25314647	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.272727
13	27651757	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.4
13	27651758	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.8
13	27651832	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.307692
13	28154676	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28186976	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28187793	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28187830	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28187833	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.363636
13	28187928	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28187929	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.307692
13	28189966	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28190274	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28190291	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28190312	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28194738	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.5
13	28195146	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4
13	28195675	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28195677	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28195701	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.272727
13	28195719	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28251962	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	32327283	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.230769
13	32327290	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.230769
13	32525622	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.266667
13	32525623	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.2
13	32525627	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.133333
13	32525638	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.692308
13	40637199	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40651143	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40655110	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.133333
13	40655119	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.133333
13	40655153	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.454545
13	40660892	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40661256	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.190476
13	40661461	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.25
13	40810459	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
13	40936497	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	40936503	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	40937733	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
13	40937741	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.111111
13	40938010	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40939261	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0487805
13	40939274	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0689655
13	40946817	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0454545
13	40949555	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.12
13	40949556	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	40949582	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0645161
13	40952544	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40953100	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40965507	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.111111
13	40978270	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0857143
13	40993645	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40998095	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.173913
13	40998100	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40998139	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40998881	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.133333
13	40998899	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	40998900	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	41009007	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41009008	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41010203	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41011473	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	41011478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0851064
13	41011552	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0526316
13	41011572	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0689655
13	41012072	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.236842
13	41012077	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.151515
13	41012169	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.208333
13	41012196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	41012201	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.238095
13	41012807	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0454545
13	41032414	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.210526
13	41032658	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.111111
13	41032742	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.157895
13	41032762	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.111111
13	41041553	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.272727
13	41058873	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	46128113	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.133333
13	46128120	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.125
13	46135254	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	1
13	46138715	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.125
13	46138743	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.125
13	46149742	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.571429
13	48239439	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.142857
13	48239453	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.193548
13	48239485	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.230769
13	48239535	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.222222
13	48240257	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.176471
13	48240345	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.133333
13	48240347	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.375
13	48240351	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.416667
13	50042178	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.133333
13	50050107	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.785714
13	50113818	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.166667
13	71821974	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71821975	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	95711260	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.153846
13	95711288	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.3
13	95751044	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.2
13	95751053	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.454545
13	98568147	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.181818
13	98568175	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.142857
13	98568176	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.357143
13	98568179	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.230769
13	98568639	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.25
14	20478130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
14	20478149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
14	20478156	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
14	20478184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	20478216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
14	20478219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.625
14	20478238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
14	20478272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
14	20478285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.290323
14	20478301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.366667
14	20478315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	20480313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	20480336	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
14	20480337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
14	20480405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347826
14	20480406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347826
14	20480471	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
14	20480478	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
14	20480502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.56
14	20480856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.642857
14	20480946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
14	20480963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
14	20481007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.705882
14	20481103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
14	20783262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	20783268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	20783269	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	21242940	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21245917	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.166667
14	21246066	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21248120	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.133333
14	21257723	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.05
14	21261071	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.263158
14	21261097	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.111111
14	21265566	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.176471
14	21265737	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.225806
14	21265756	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.16
14	21265764	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.448276
14	21266272	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.176471
14	21480101	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.2
14	23091508	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.4
14	23091819	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.538462
14	23091820	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.230769
14	30655866	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.153846
14	30684199	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.363636
14	34533253	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.2
14	35094923	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.181818
14	39178411	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.0869565
14	39184852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
14	44943898	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.181818
14	44943915	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.142857
14	45207521	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.181818
14	45207527	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.181818
14	49584074	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.0869565
14	49584256	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.0909091
14	49584664	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.368421
14	49584736	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.5
14	49788762	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.7
14	49833061	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.25
14	50196946	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50199071	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.214286
14	50202145	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50226226	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
14	50725617	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.208333
14	52323331	A->G	+	ENSG00000125384	PTGER2	protein_coding	Intergenic	.	.	Alu	0.125
14	52323437	A->G	+	ENSG00000125384	PTGER2	protein_coding	Intergenic	.	.	Alu	0.153846
14	52712674	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.1875
14	52712692	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.866667
14	52712709	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.153846
14	52712723	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.153846
14	52714275	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.166667
14	52714300	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.230769
14	52717908	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.2
14	54878908	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.181818
14	54878937	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.2
14	55056627	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.2
14	55060882	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55061070	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.176471
14	55135839	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.166667
14	55281199	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55284016	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55284042	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.230769
14	55284060	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55284098	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55284099	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55284132	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55284755	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55284777	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.545455
14	55284790	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.3
14	55284825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.333333
14	55289605	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.230769
14	55289675	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55291738	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55291780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.230769
14	55291827	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.266667
14	55291868	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.230769
14	55291886	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55291905	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
14	55293418	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
14	55296014	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0952381
14	55302553	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	58278006	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.2
14	58292689	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.133333
14	58314924	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.2
14	58326624	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.375
14	58337531	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.545455
14	60256345	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.272727
14	61741591	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.153846
14	61743332	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.105263
14	61745969	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.1
14	70921414	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.3
14	91055621	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.2
14	91055624	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.3
14	91055629	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.2
14	91463494	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.230769
14	91464245	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.3125
14	91479679	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.2
14	91506142	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.2
14	91506143	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91507874	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.227273
14	92661630	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	92662904	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.125
14	92662914	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.133333
14	92662923	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.5
14	92662985	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.153846
14	92663011	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.25
14	92663073	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.210526
14	92663085	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.227273
14	93322318	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.153846
14	93322861	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.142857
14	93322894	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.2
14	96530499	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.2
14	96530845	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.2
15	22843241	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.153846
15	22846603	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.272727
15	25429631	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.272727
15	25429656	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.4
15	25433825	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.235294
15	25433943	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.4
15	25437368	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.3
15	25437385	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.272727
15	25437479	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.315789
15	34100123	A->G	-	ENSG00000134153	EMC7	protein_coding	Intergenic	.	.	Alu	0.2
15	41940039	A->G	-	ENSG00000103966	EHD4	protein_coding	Intergenic	.	.	Alu	0.230769
15	41940094	A->G	-	ENSG00000103966	EHD4	protein_coding	Intergenic	.	.	Alu	0.4
15	43749628	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.230769
15	43749891	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.153846
15	43749899	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.142857
15	45600580	A->G	+	ENSG00000104164	BLOC1S6	protein_coding	Intergenic	.	.	Alu	0.128205
15	49033645	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.25
15	49891598	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.125
15	50000054	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.166667
15	50000171	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.15625
15	50000172	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.529412
15	50062261	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.222222
15	50062295	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.214286
15	50062448	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	1
15	50064991	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.4
15	50065025	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.15
15	50347838	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.272727
15	50347888	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.166667
15	50427958	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.181818
15	50736999	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50737006	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50745640	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.363636
15	52022062	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.2
15	52026835	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.266667
15	52043391	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.2
15	52558256	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.166667
15	52561046	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.631579
15	58921939	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58930402	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.25
15	58930662	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	59671920	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.214286
15	59671967	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0606061
15	59671993	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.114286
15	59672014	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0540541
15	59672026	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0645161
15	59672029	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.193548
15	59672062	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.103448
15	59672304	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0408163
15	59672309	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0384615
15	59672345	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.282609
15	59672356	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0810811
15	59672366	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0909091
15	59672371	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.193548
15	59672376	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0588235
15	59672425	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.590909
15	59672434	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.173913
15	59672441	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.08
15	59672467	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0588235
15	59673315	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.454545
15	59673319	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.363636
15	59673638	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.285714
15	59673687	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.2
15	59680465	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0833333
15	59681648	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.2
15	59682084	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.153846
15	59682085	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.153846
15	63124807	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.230769
15	63128365	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.363636
15	63128387	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63128437	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.111111
15	63128439	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63128440	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63128909	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63129011	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.307692
15	63214607	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63524561	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.16
15	63546830	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0714286
15	63550149	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63567207	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.157895
15	63567268	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.125
15	63568205	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63568221	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.411765
15	63568275	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.333333
15	63568276	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.380952
15	63581788	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63582162	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63582172	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.24
15	63583332	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.15
15	63583338	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63583389	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0952381
15	63828407	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.5
15	64359860	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64359862	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64362534	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.6
15	64363284	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64363293	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.5
15	64363294	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64363831	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64363837	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.6
15	64363840	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.4
15	64363972	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.384615
15	64364001	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.45
15	65734871	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65735160	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65735206	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
15	65735212	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65735278	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.545455
15	65735285	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.272727
15	65735296	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65735321	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.5
15	65735331	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65735979	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65737117	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65737136	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0869565
15	65737247	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.15
15	65737252	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65737258	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.12
15	65737301	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65737326	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65737331	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65737334	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65758584	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65759222	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65759234	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65762459	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65762512	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65768133	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65777571	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65777580	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65777879	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.214286
15	65777891	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65777951	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65779079	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65779263	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65779293	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65779332	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65779337	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65779344	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65779747	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65779845	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65779887	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65779889	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65779939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65788293	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65788675	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.571429
15	65788723	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65789220	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65789298	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.545455
15	65789324	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.26087
15	65789899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.15
15	65789904	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65789938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.130435
15	65789988	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.266667
15	66441092	A->G	+	ENSG00000169032	MAP2K1	protein_coding	Intergenic	.	.	Alu	0.2
15	68059267	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.157895
15	68059268	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.111111
15	68059269	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.222222
15	68059450	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	68059456	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.142857
15	68059520	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.153846
15	68059590	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.125
15	68059591	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.4375
15	68065444	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
15	68076450	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72477875	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	72477899	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	72762944	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.7
15	72776221	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.333333
15	72776267	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.272727
15	72776976	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.538462
15	72777006	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.6875
15	72778004	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72778109	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.3
15	72778127	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.153846
15	72778137	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.153846
15	72778140	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.384615
15	72780613	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.214286
15	72780687	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.190476
15	73613912	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.3
15	73626991	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.3
15	74549500	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.166667
15	74549522	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.153846
15	74549527	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.153846
15	78887803	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.117647
15	78887879	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.166667
15	78887883	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.210526
15	78887896	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.111111
15	78887959	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.2
15	78890126	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.1
15	78890582	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.125
15	78899311	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
15	78899512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
15	78899519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.037037
15	78901405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
15	80060871	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80083637	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.409091
15	80083729	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.636364
15	80083730	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.363636
15	80083731	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80083761	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80083764	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80083770	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80083771	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.636364
15	80088334	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4
15	80088335	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.3
15	80089508	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80097086	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0952381
15	80097100	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80097252	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.238095
15	80097261	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80097262	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.65
15	80097570	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80103918	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.266667
15	80103928	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.388889
15	80103978	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.272727
15	80104023	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0952381
15	80104267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.304348
15	80104380	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.615385
15	80104399	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80107130	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80111998	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.538462
15	80112017	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.266667
15	82824879	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.230769
15	82824941	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.357143
15	82825002	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.363636
15	85586336	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.133333
15	89094623	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.176471
15	89097922	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	89097965	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.142857
15	89097970	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	89097984	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.15
15	89098024	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.190476
15	89099429	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.133333
15	92890826	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0526316
15	92910107	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92910152	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	92910616	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	92910632	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	92911528	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.125
15	92911617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.391304
15	92911618	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.26087
15	92912437	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	92916828	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92917516	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.272727
16	11580984	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11707825	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.272727
16	11707830	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.7
16	11707998	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11713050	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11720813	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.142857
16	11720814	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.4
16	11720815	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.8
16	11720857	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.111111
16	11724135	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11724171	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.214286
16	11726037	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.166667
16	11726038	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.166667
16	11726042	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.333333
16	11726168	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.153846
16	14976753	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.6
16	15080630	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.214286
16	15697507	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15697508	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15697509	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.5
16	15698624	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15698627	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15701035	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15701071	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.117647
16	15977708	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	21506900	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
16	21507802	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
16	23470994	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23471790	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23477134	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23496785	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.153846
16	23924236	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.363636
16	23924271	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.25
16	23924287	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.25
16	23943323	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
16	24741888	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.454545
16	24741890	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.363636
16	28168842	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28827354	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.3
16	28828825	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.4375
16	28828855	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828856	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28828923	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.727273
16	28829011	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
16	28831428	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.2
16	28831445	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.2
16	28831722	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.375
16	28831724	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.294118
16	29561357	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	29584375	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	29591765	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
16	29591766	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
16	29591789	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
16	29591790	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	29591793	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
16	29821970	A->G	+	ENSG00000281348	AC120114.5	protein_coding	Intergenic	.	.	Alu	0.133333
16	31063195	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.117647
16	31063222	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.157895
16	31063230	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.117647
16	31063249	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.133333
16	31063303	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.117647
16	31063305	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.111111
16	31063311	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.1
16	31063312	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.3
16	31063330	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.285714
16	31063403	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.166667
16	31063404	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.166667
16	31063406	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.333333
16	31121221	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0289855
16	31121648	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0408163
16	31121869	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.15
16	31123569	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.185185
16	31359000	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.3
16	31359201	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.142857
16	31359249	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.181818
16	31891471	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.461538
16	31891501	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.466667
16	31891754	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.142857
16	31891768	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.1
16	31892300	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.333333
16	31892310	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.75
16	31892381	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.272727
16	31892382	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.333333
16	50674436	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.25
16	53442205	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.8
16	53442209	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.545455
16	53442218	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.363636
16	56940406	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.339623
16	56940446	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.133333
16	56940472	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.228571
16	56940473	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0555556
16	56940479	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.444444
16	56940516	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.217391
16	56940580	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.230769
16	56940706	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.157895
16	56940733	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0833333
16	56940775	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0666667
16	56940786	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0689655
16	56940808	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0714286
16	56940810	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0689655
16	56940813	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.178571
16	56940859	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.483871
16	67072947	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.25
16	67072948	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.166667
16	67072981	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.125
16	67074655	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.3
16	69579014	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.133333
16	69584024	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69598127	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.4
16	69617727	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.272727
16	69638010	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	71754117	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.2
16	71802817	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.2
16	74298661	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.153846
16	74298731	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.2
16	74298777	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.2
16	74299525	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.2
16	81029809	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.133333
16	84978260	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.153846
16	84978270	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.166667
16	84978779	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.2
16	84978785	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.2
16	84978815	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.2
16	85560216	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.2
16	85560919	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.111111
16	85560950	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.117647
16	85560951	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.117647
16	85560985	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	85561047	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.4
16	87357817	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.727273
16	87357821	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.166667
16	87401602	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.210526
16	89452079	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89452109	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89467325	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.5
16	89467347	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89468470	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89468502	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.3
16	89469411	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89469422	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89736904	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89875079	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
17	10175112	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.454545
17	10175119	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.181818
17	16013057	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.166667
17	16013130	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.357143
17	18272082	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.7
17	18272248	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.444444
17	18273703	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0714286
17	18651641	A->G	+	ENSG00000189375	TBC1D28	protein_coding	Intergenic	.	.	Alu	1
17	29283515	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29290020	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.230769
17	30896663	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30962191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
17	30962233	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
17	30962272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30962371	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30962726	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	30962738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
17	30962744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	30963186	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	30963203	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	30963209	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	30963226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	30963741	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
17	30963794	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
17	30963838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
17	30963858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
17	30964483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30964530	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30964554	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	30964569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	30965166	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intergenic	.	.	Alu	0.117647
17	30965296	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intergenic	.	.	Alu	0.333333
17	30965298	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intergenic	.	.	Alu	0.133333
17	30967112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	32450141	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.181818
17	32475716	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.5
17	35076556	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35078775	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35078814	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.25
17	35078831	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
17	35078840	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35085700	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35085709	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
17	35086314	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
17	36569173	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36569361	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.4
17	36584455	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.1875
17	36584590	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36584600	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.230769
17	36584723	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.9
17	36584775	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	36584780	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36584898	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.454545
17	36587832	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36588508	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	40242196	A->G	+	ENSG00000171475	WIPF2	protein_coding	Intergenic	.	.	Alu	0.272727
17	40242277	A->G	+	ENSG00000171475	WIPF2	protein_coding	Intergenic	.	.	Alu	0.266667
17	41983221	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
17	41983397	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.166667
17	42004903	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.166667
17	42319447	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42327934	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42353091	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.272727
17	43251790	A->G	-	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.473684
17	43322286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
17	44680261	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.818182
17	44680267	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.2
17	45467598	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.153846
17	45467613	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.2
17	45470457	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	45574260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.09375
17	45574914	A->G	-	.	.	.	Intergenic	.	.	Alu	0.419355
17	45579743	A->G	-	.	.	.	Intergenic	.	.	Alu	0.529412
17	45580923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
17	45581561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
17	45582922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
17	45583394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.764706
17	45583824	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
17	46502359	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
17	46502367	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
17	47155753	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.153846
17	47155758	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.636364
17	47674140	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intergenic	.	.	Alu	0.454545
17	48940217	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.2
17	48940218	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.2
17	50741933	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.25
17	51032701	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.333333
17	51032834	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51032851	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.25
17	51032877	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51032895	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	59203198	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.08
17	59203299	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.666667
17	59203311	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.2
17	59204921	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.028169
17	59751932	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.25
17	59842603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	59842610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
17	59842906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	59842950	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	59843007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	62040045	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.181818
17	62048171	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.6
17	62589826	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.615385
17	62589830	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.615385
17	62589838	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.153846
17	62590753	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	64469608	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	64469621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	64469633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	64469634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	64469660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	64469661	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
17	64469673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
17	64470117	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64470119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
17	64470155	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64470194	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64470220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64470277	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
17	64470278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
17	64470291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
17	64470294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
17	64470368	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
17	64471694	A->G	+	.	.	.	Intergenic	.	.	Alu	0.586207
17	64471696	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
17	64471697	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
17	64471718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
17	64471719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
17	64471750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.14
17	64472209	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
17	64472238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	64472247	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	64472266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
17	64472290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	64472291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	64472302	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	64817618	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	65036623	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.153846
17	65042258	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.2
17	67190773	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67190778	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67348856	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1875
17	67348872	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67348873	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.363636
17	67348874	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67348884	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.2
17	67354197	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.307692
17	67354324	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.363636
17	67355259	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67358018	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67358021	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.666667
17	67358060	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.722222
17	67358086	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67358089	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.105263
17	67358142	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0833333
17	67358150	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67358195	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.214286
17	67358196	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.285714
17	67358311	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.416667
17	67358322	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.4
17	67358381	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.454545
17	67358419	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67358424	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.454545
17	67363244	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.307692
17	67363300	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	67363312	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	74782302	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.230769
17	74782320	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.533333
17	74782336	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.8125
17	74782874	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.6
17	74782875	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.2
17	74788041	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.181818
17	75104551	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0882353
17	75104578	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0625
17	75104650	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0740741
17	75104711	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0526316
17	75104712	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0526316
17	75104733	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0571429
17	75106880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
17	75107244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	75296522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	75356373	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75356400	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.454545
17	75356426	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3
17	75360064	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75366448	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75366682	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.105263
17	75366686	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.210526
17	75366688	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75368825	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.125
17	75375040	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75375044	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75383847	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75386360	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.235294
17	75675207	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	75675215	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.181818
17	76516692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	76719531	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.428571
17	76719896	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.272727
17	76720069	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.2
17	76720106	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76723713	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.136364
17	76723714	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.136364
17	76724183	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76724189	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76724238	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76724282	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.5625
17	76724286	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.142857
17	76724330	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76727468	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.12
17	78379931	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.105263
17	78379946	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.1
17	78379960	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78404340	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.25
17	78404351	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78404410	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.368421
17	78404420	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78404480	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.115385
17	78404489	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0666667
17	78404765	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.08
17	78404860	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78422530	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.363636
17	78422598	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78422709	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.2
17	78422758	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.545455
17	78422897	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.3
17	78696512	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.235294
17	78699122	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.3
17	78702897	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.4
17	78749157	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78749305	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78749312	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78763866	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.105263
17	78763867	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78764428	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78764434	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78770507	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.1
17	78770540	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.117647
17	78770557	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.357143
17	78770645	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.363636
17	78773219	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.307692
17	78773517	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78773543	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.2
17	78906256	A->G	-	ENSG00000035862	TIMP2	protein_coding	Intergenic	.	.	Alu	0.5
17	78909096	A->G	-	ENSG00000035862	TIMP2	protein_coding	Intergenic	.	.	Alu	0.2
17	81856814	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	81857413	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.166667
17	81858115	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	81881217	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	81881229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.473684
17	81881230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.162162
17	81881256	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114286
17	81881294	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
17	81881351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.631579
17	81881354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	81881361	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	81881378	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
17	81881420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
17	81881441	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	81881465	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	81881466	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
17	81881968	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
17	81882241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	81882249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
17	81882264	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
17	81882273	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	81882933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81883509	A->G	-	.	.	.	Intergenic	.	.	Alu	0.24
17	81883539	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81883970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
17	81883993	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
17	81884003	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
17	81884023	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	81884029	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	81884039	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
17	81884051	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
17	81884069	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
17	81884088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	81884107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
17	81886709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	81886760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
17	81886785	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	81886831	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	81886840	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
17	81886841	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81886858	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	81886859	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	81886866	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81886871	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
17	81886936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	81886942	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
17	82628026	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.2
17	82628028	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.2
18	11890378	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.181818
18	12031590	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.2
18	12310609	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.538462
18	12322136	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.5
18	12322139	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.545455
18	12322181	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.4
18	12330163	A->G	+	ENSG00000141385	AFG3L2	protein_coding	Intergenic	.	.	Alu	0.0714286
18	21019184	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.291667
18	21019214	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.105263
18	21019292	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.428571
18	21019374	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.266667
18	21025508	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21584629	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.4
18	21585766	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.2
18	21585825	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.333333
18	21585865	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.4
18	21596159	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.230769
18	26081392	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.333333
18	26081428	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.157895
18	26081447	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.125
18	26081455	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.333333
18	26082014	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.166667
18	32104141	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.2
18	32120418	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.357143
18	32122128	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.181818
18	36793768	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36793942	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.153846
18	45953631	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.538462
18	49389568	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.25
18	49389608	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.5
18	49389748	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.153846
18	49389760	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.153846
18	49390164	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.25
18	49390167	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49390223	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.363636
18	49390689	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.111111
18	49482643	A->G	-	ENSG00000215472	RPL17-C18orf32	protein_coding	Intergenic	.	.	Alu	0.363636
18	56613091	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.2
18	63396313	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.272727
18	76807683	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.166667
18	76807715	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.333333
18	76807716	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.266667
18	76807723	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.5
18	76807759	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.333333
18	76808309	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.0909091
18	76808322	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.105263
18	76808348	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.142857
18	76809145	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.0666667
18	76809226	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.0444444
18	79119003	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.7
19	10161552	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.666667
19	10275610	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.153846
19	10275613	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.153846
19	10275635	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.25
19	10279648	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.3
19	10363439	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.4
19	10661171	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.454545
19	10661711	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.2
19	10930367	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.4
19	10930374	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	10930629	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.285714
19	10930770	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.285714
19	10930877	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.153846
19	10930914	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.153846
19	10931040	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.363636
19	10931045	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.181818
19	10931048	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.181818
19	10931066	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	11097361	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.153846
19	11101848	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.166667
19	11101902	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.2
19	11108793	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.166667
19	11118663	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.2
19	11118667	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.181818
19	12625260	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.181818
19	12646217	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	12646227	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.0909091
19	12646228	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.454545
19	12646260	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.133333
19	12646373	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.153846
19	12646408	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.5
19	12646409	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.3125
19	13838069	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
19	13850004	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	14382601	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.046875
19	14382766	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.117647
19	14383082	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14392641	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.176471
19	14398554	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.416667
19	14398942	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.285714
19	14400563	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.214286
19	15329478	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.2
19	15329493	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.3
19	15329497	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.2
19	16082333	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16084103	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16084118	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.272727
19	16084134	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.529412
19	16120843	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.1875
19	16120870	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.2
19	16123439	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.2
19	16123507	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.2
19	17084154	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.7
19	17106854	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	18178344	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
19	18178407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	18178409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
19	18178410	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
19	18178481	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
19	18178503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
19	18178525	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
19	18178580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
19	18178775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
19	18178776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
19	18178875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	18178889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
19	18178909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
19	18178912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15625
19	18178935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.194444
19	18178947	A->G	+	.	.	.	Intergenic	.	.	Alu	0.292683
19	18178949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
19	18178956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
19	18179158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18179169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
19	18179170	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18179356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	18179388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	18179406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
19	18179407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18179482	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
19	18180911	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	18277779	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	19322417	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.5
19	19322437	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.416667
19	19322478	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.363636
19	19403002	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.166667
19	21021967	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.153846
19	21021980	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.166667
19	21022021	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.272727
19	21153583	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.727273
19	23371283	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.2
19	34198495	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	35892105	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.166667
19	35893012	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.166667
19	43651537	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.2
19	43653092	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.153846
19	43659314	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.2
19	44755648	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.142857
19	45006331	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45012671	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45015165	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.4
19	47310717	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.285714
19	47310718	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.214286
19	49489305	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.3
19	51133489	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.181818
19	51133503	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.2
19	51133504	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.2
19	51133564	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.133333
19	51133570	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.333333
19	51134380	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.230769
19	51216446	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
19	51216448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.714286
19	51216454	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	51216481	A->G	+	.	.	.	Intergenic	.	.	Alu	0.923077
19	51217368	A->G	+	.	.	.	Intergenic	.	.	Alu	0.24
19	51217489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	51217628	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	51217654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.846154
19	51217680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	51217681	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	51217699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
19	52199376	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.4
19	53215893	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
19	53215897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	54098321	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54098469	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.3
19	54098477	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54098478	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54098751	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.272727
19	54204457	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.125
19	54237200	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0769231
19	54237206	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.285714
19	54237215	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.136364
19	54237223	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.230769
19	54237251	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54237277	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.318182
19	54237280	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.2
19	54237281	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.368421
19	54237319	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0833333
19	54237336	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.217391
19	54238093	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0416667
19	54238186	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.185185
19	54238240	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0666667
19	54238262	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0833333
19	54597829	A->G	+	ENSG00000104974	LILRA1	protein_coding	Intergenic	.	.	Alu	0.272727
19	54598066	A->G	+	ENSG00000104974	LILRA1	protein_coding	Intergenic	.	.	Alu	1
19	54598067	A->G	+	ENSG00000104974	LILRA1	protein_coding	Intergenic	.	.	Alu	0.7
19	57300521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
19	57301127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	57304193	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
19	57865528	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
19	57865545	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.181818
19	57865569	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.545455
19	57866063	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
19	57906544	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.461538
19	57906549	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.230769
20	17676793	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	17676837	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.2
20	17676862	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.210526
20	17676872	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.1
20	17676886	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
20	17676908	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.214286
20	17676936	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.125
20	17677574	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	17677589	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.15
20	17677832	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.3
20	17677833	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.3
20	17962333	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.181818
20	17962343	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.272727
20	17962476	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.25
20	17962478	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.6
20	28582849	A->G	-	ENSG00000282826	FRG1CP	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
20	32080872	A->G	+	ENSG00000101336	HCK	protein_coding	Intergenic	.	.	Alu	0.181818
20	32080879	A->G	+	ENSG00000101336	HCK	protein_coding	Intergenic	.	.	Alu	0.153846
20	32851296	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.130435
20	32853171	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.416667
20	32853223	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.0666667
20	32854012	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.166667
20	32854017	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.2
20	33821662	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.230769
20	35268838	A->G	-	ENSG00000261582	AL121753.1	protein_coding	Intergenic	.	.	Alu	0.166667
20	35714706	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35718701	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35719457	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.357143
20	35719485	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.157895
20	35719601	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.272727
20	35720647	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.416667
20	35720725	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.266667
20	35722218	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35724087	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.15
20	35728981	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35736713	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.181818
20	35736762	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.214286
20	35736791	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35736817	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.4
20	35737014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0689655
20	35737015	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0666667
20	35737085	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.210526
20	35737091	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.136364
20	35737148	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0909091
20	35737241	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0444444
20	35737268	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0526316
20	35737307	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0967742
20	35737555	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0555556
20	35738073	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.15
20	35738080	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1
20	36611102	A->G	+	ENSG00000101084	RAB5IF	protein_coding	Intergenic	.	.	Alu	0.2
20	36909916	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36913892	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	36915615	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36917459	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	36918128	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.272727
20	36918169	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.333333
20	36918188	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.357143
20	36918426	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36919073	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36920655	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36927929	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36927938	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36927959	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36929470	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36929478	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.272727
20	36929517	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36929541	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.125
20	36932518	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.4
20	36933533	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36933692	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.363636
20	36933737	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36933758	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.5
20	36934263	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.12
20	36934278	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.136364
20	36934367	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.1875
20	36934375	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36934376	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.285714
20	36934400	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36934402	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.692308
20	36934466	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.583333
20	36934476	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.4
20	36936056	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.285714
20	36936144	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.380952
20	36936183	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	36936191	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	36936193	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.1
20	36936194	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.1
20	36936234	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.222222
20	36936399	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36936709	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.25
20	36936750	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.238095
20	36936757	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	36936838	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.210526
20	36936839	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.263158
20	36936978	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.5
20	36936997	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.461538
20	36938140	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36940120	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	37737036	A->G	+	ENSG00000132792	CTNNBL1	protein_coding	Intergenic	.	.	Alu	0.636364
20	41037041	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
20	41038828	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.125
20	41044971	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.111111
20	41056504	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
20	41056525	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41056582	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1875
20	41056620	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.266667
20	41056622	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.461538
20	41056717	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
20	44502856	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.2
20	47507712	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.25
20	47507752	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.142857
20	47507776	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.125
20	47507784	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.111111
20	47511728	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.153846
20	47511737	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.25
20	47514868	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47515715	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.153846
20	47518685	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.272727
20	47518686	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47518687	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	48810365	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.5
20	48811252	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.3
20	48811287	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.4
20	48944740	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.4
20	48944743	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.3
20	48945646	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.3
20	48945760	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.2
20	48947471	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	49700527	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49707690	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.47619
20	49707722	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.117647
20	49709662	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49710971	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.166667
20	50545236	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.166667
20	53573570	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.2
20	53573731	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.5
20	53573732	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.5
20	56477617	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.2
20	58307644	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
20	58307956	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
20	63874477	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.0869565
20	63874515	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.214286
20	63874539	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.285714
20	63874540	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.266667
20	63874612	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.142857
20	63874613	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.285714
21	14542700	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.116279
21	14542800	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.1
21	14544189	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0714286
21	33231822	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33231945	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.25
21	33360194	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
21	33360212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
21	33360220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
21	33360298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
21	33360354	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
21	33361784	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
21	33406709	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33406884	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33430555	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.3
21	33503605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
21	33503806	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
21	35023140	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.363636
21	37375589	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.642857
21	37375630	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.166667
21	37376255	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.315789
21	37376290	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
21	37376344	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.388889
21	37376366	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.130435
21	37376388	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.130435
21	37376430	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.259259
21	37376438	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0869565
21	44075995	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.181818
22	17212473	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.214286
22	20573244	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20891736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
22	21857103	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24173669	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.3
22	24173713	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24573806	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.03125
22	24574564	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0285714
22	24574781	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0289855
22	25396868	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.181818
22	29287897	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.214286
22	29297178	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.266667
22	29499696	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
22	29499835	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
22	29502548	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
22	29505444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
22	29890433	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.6
22	29891695	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.272727
22	29891707	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.2
22	29975732	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.4
22	29975735	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.3
22	30660372	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.181818
22	36310351	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.125
22	36310402	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36310405	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.285714
22	36338720	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36366025	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.153846
22	36517925	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.142857
22	36517927	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.230769
22	36517930	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.454545
22	36518326	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.166667
22	37945394	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.181818
22	37945400	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.3
22	38210937	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.272727
22	38210939	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.181818
22	38210952	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.2
22	38502193	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.25
22	38502208	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.230769
22	38953536	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.25
22	38954097	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.416667
22	38954126	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.2
22	38954257	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.941176
22	38954640	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.4
22	41099109	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	42051129	A->G	-	ENSG00000183066	WBP2NL	protein_coding	Intergenic	.	.	Alu	0.272727
22	42052343	A->G	-	ENSG00000183066	WBP2NL	protein_coding	Intergenic	.	.	Alu	0.117647
22	42052345	A->G	-	ENSG00000183066	WBP2NL	protein_coding	Intergenic	.	.	Alu	0.117647
22	42054847	A->G	-	ENSG00000183066	WBP2NL	protein_coding	Intergenic	.	.	Alu	0.363636
22	42953998	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	42989004	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.5
22	42989028	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.3
22	42989040	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.363636
22	42989398	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	42989422	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.454545
22	42989436	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	43006776	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.3125
22	43006779	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	43006782	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	43007415	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.285714
22	43007448	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	43335803	A->G	-	ENSG00000159307	SCUBE1	protein_coding	Intergenic	.	.	Alu	0.230769
22	49816727	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.333333
22	49822677	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.157895
22	50540472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
22	50624132	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.5
22	50624168	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.181818
1	100410028	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.2
1	100426230	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.3
1	100426323	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.153846
1	100426352	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.363636
1	108755391	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.5
1	108755410	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.3
1	109063539	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.09375
1	109063550	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0612245
1	109063551	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0425532
1	109063606	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.047619
1	109063684	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0566038
1	109063698	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0363636
1	109063721	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0526316
1	109063990	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.111111
1	109064033	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.153846
1	109064035	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.32
1	109064089	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0833333
1	109064101	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.125
1	109553830	A->G	+	ENSG00000065135	GNAI3	protein_coding	Intergenic	.	.	Alu	0.666667
1	112655366	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	112655392	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112655397	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.454545
1	112655637	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.125
1	112655666	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.375
1	112655692	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.238095
1	112655702	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.444444
1	112655715	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.176471
1	114753657	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0487805
1	114753804	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.181818
1	114753816	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.214286
1	114754186	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	114754194	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.133333
1	114754265	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.181818
1	114754266	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.25
1	116520408	A->G	-	ENSG00000116815	CD58	protein_coding	Intergenic	.	.	Alu	0.153846
1	145990324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	145991398	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	145992078	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
1	146387583	A->G	+	ENSG00000277406	AC245407.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0517241
1	148388163	A->G	-	ENSG00000274020	LINC01138	processed_transcript	Intergenic	.	.	Alu	0.3
1	149887390	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0572917
1	149887412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113636
1	149887468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
1	150340858	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150341843	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.2
1	150571344	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0625
1	150611925	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.027027
1	150611926	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0266667
1	150612592	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0235294
1	150612624	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0285714
1	150613108	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0555556
1	153639913	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.117647
1	153639954	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.25
1	153640289	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.153846
1	153640578	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.2
1	155556227	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.153846
1	155680664	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155681583	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.285714
1	155683484	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.2
1	155683490	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.363636
1	155683499	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155683544	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	155683612	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155683622	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155905396	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155905479	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.25
1	156116621	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.1
1	156116629	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.1
1	156116778	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0769231
1	156116792	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0714286
1	156117864	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.08
1	156119464	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.151515
1	156119482	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.195122
1	156120495	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0540541
1	156120547	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0545455
1	156120593	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0571429
1	156120610	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0444444
1	156121162	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.117647
1	156121239	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.16
1	156121246	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0769231
1	156121980	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0740741
1	156122037	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.12
1	156132017	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0714286
1	156132018	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.1
1	156132019	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.1875
1	156132048	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0645161
1	156132068	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0666667
1	156132117	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0606061
1	156133207	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.181818
1	156134036	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.153846
1	156469325	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.363636
1	156469382	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.142857
1	156469764	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.230769
1	156469786	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.230769
1	156474367	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	161520241	A->G	+	ENSG00000143226	FCGR2A	protein_coding	Intergenic	.	.	Alu	0.230769
1	162574336	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	167241933	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.727273
1	167251265	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.166667
1	167251269	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.153846
1	167251292	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.181818
1	171487128	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.352941
1	171487140	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.590909
1	171487653	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171493713	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.181818
1	171500526	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0952381
1	171500536	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.157895
1	171502823	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.15
1	171502824	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.25
1	171502880	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.181818
1	171502895	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.357143
1	171502897	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.333333
1	171502943	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.416667
1	171502957	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
1	173858610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	173858698	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	173858716	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	173858742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
1	173858743	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	173858813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
1	173858826	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
1	173858850	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	173859124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
1	173859700	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
1	173859709	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
1	173859744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	173862780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	174007498	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
1	174007632	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
1	174007677	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.272727
1	174007737	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
1	176152624	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176152625	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	182864281	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.416667
1	183578639	A->G	-	ENSG00000116701	NCF2	protein_coding	Intergenic	.	.	Alu	0.3
1	184969804	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.272727
1	184969811	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.636364
1	193169283	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.2
1	198666069	A->G	+	ENSG00000261573	AL157402.2	antisense	Intergenic	.	.	Alu	0.111111
1	198679336	A->G	+	ENSG00000236278	PEBP1P3	processed_pseudogene	Intergenic	.	.	Alu	0.230769
1	198679337	A->G	+	ENSG00000236278	PEBP1P3	processed_pseudogene	Intergenic	.	.	Alu	0.153846
1	198711283	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.583333
1	201871448	A->G	+	ENSG00000198700	IPO9	protein_coding	Intergenic	.	.	Alu	1
1	202137532	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.3
1	203811583	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203811588	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.230769
1	204402500	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.125
1	204526724	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.272727
1	204526725	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.2
1	204526737	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.153846
1	204534653	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.272727
1	204535780	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.125
1	212336277	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.166667
1	217603841	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.4
1	223790291	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.4
1	223809349	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	223809362	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.105263
1	224399889	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.384615
1	224399941	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.166667
1	224400792	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.2
1	224400825	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.214286
1	224411826	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.181818
1	224411925	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.166667
1	224414736	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.2
1	225788331	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.125
1	225788349	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.857143
1	225788358	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.307692
1	225997554	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.181818
1	225997578	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.363636
1	225997673	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.545455
1	235232618	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25
1	235238793	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235257605	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.230769
1	235257610	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.333333
1	235257613	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235283840	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.125
1	235283873	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235299036	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235306322	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.307692
1	235306355	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235307345	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235313200	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235313205	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235313206	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.357143
1	235826803	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0666667
1	235826850	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0526316
1	235826857	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0512821
1	235826901	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.115385
1	235827284	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.136364
1	235827306	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.130435
1	235827331	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.181818
1	235827343	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0526316
1	235827355	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0882353
1	235827374	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0526316
1	235861748	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.35
1	235861767	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.117647
1	235861787	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.615385
1	235863270	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.2
1	235863280	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.2
1	235863347	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.153846
1	243244684	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.181818
1	243249169	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.25
1	243249175	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.214286
1	243249214	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.230769
1	246002460	A->G	+	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.846154
1	246594550	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.0869565
1	246594648	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.0909091
1	246922197	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	246922297	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.28
1	246922298	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	246922597	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.384615
1	246922613	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.153846
1	247099673	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	247155657	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.2
1	247427581	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.320755
1	247428530	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0689655
1	247430796	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.5
1	247430836	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.222222
1	247430860	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.25
1	247430879	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.357143
1	247433979	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.222222
2	101274902	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0350877
2	101287210	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101307406	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101307452	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	108455393	A->G	+	ENSG00000135968	GCC2	protein_coding	Intergenic	.	.	Alu	0.3
2	108738677	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108738729	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.176471
2	108738778	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108738818	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.166667
2	108738830	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108738839	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108739857	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108739867	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.166667
2	108742421	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.15
2	108742443	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.266667
2	108742445	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.153846
2	108742486	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	108742487	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	108742511	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.222222
2	108742547	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.137931
2	108743459	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	108744218	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108744220	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108744257	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108744345	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.333333
2	108744356	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.166667
2	108773211	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	111490147	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.454545
2	112409540	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.111111
2	112655149	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	112661817	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	113707632	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.454545
2	113707727	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113708578	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113709846	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113709864	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.125
2	113709923	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.117647
2	113709933	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0909091
2	113710015	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.15
2	113710048	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.117647
2	113710062	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.785714
2	113710473	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.272727
2	113710485	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.454545
2	113710486	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.363636
2	113710547	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.538462
2	113710564	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.214286
2	113710567	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0909091
2	113710608	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.153846
2	113710654	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113710681	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113710726	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.3
2	113710732	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113710756	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113933253	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.1
2	113933460	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.153846
2	113949290	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.2
2	127334086	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.230769
2	127345091	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.357143
2	127365006	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127376949	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.230769
2	127376966	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.363636
2	127377004	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127377055	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127383700	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.08
2	127802886	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.3
2	131065554	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131089131	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131091885	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131113273	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.166667
2	131113287	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.307692
2	131113293	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.363636
2	131113294	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.181818
2	131145410	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.166667
2	131145411	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.272727
2	131145441	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.3
2	135067949	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	135067954	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.307692
2	135067975	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	135759873	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.2
2	135760030	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	143301084	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.210526
2	143301085	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.157895
2	143301088	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.222222
2	143301095	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.4375
2	143301096	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.2
2	143338642	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.666667
2	144329014	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.2
2	144409794	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.272727
2	144410020	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.1
2	144410027	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.1
2	144410050	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.583333
2	144422737	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	151421600	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	151421612	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	157420100	A->G	-	ENSG00000115165	CYTIP	protein_coding	Intergenic	.	.	Alu	0.0588235
2	159716503	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
2	159716529	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.4
2	159716565	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
2	161166667	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.148148
2	161166673	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.103448
2	161167765	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.181818
2	161167809	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.125
2	161167815	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.333333
2	161167831	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.375
2	161168671	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.15
2	161168672	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.15
2	161168673	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.105263
2	161168677	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.157895
2	161168713	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.2
2	161168775	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.1875
2	161205824	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.117647
2	161205884	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.148148
2	168679090	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.333333
2	171749317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	171749318	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
2	171749327	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
2	171931130	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.111111
2	172576057	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	172576061	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.181818
2	172576133	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.5
2	173931272	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0408163
2	173932330	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1
2	173932362	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.08
2	173932368	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	173932372	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.166667
2	173932447	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.151515
2	173932455	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0540541
2	173932825	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.214286
2	173932870	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.125
2	173932910	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.136364
2	173943564	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.133333
2	174376040	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.181818
2	174376049	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.272727
2	174376134	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.285714
2	174376152	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	177214540	A->G	+	ENSG00000170144	HNRNPA3	protein_coding	Intergenic	.	.	Alu	0.181818
2	177249051	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.176471
2	178434223	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.583333
2	178434228	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.2
2	178434240	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.2
2	179234575	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.166667
2	179260367	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	186501829	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.2
2	186501838	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.2
2	190885424	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0909091
2	190886661	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.230769
2	191011516	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.5
2	191011527	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.176471
2	191011551	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.238095
2	191011557	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	191012191	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.12
2	191012196	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.419355
2	191012221	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.448276
2	191012353	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.166667
2	196141397	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.137255
2	196141443	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0465116
2	196141471	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.466667
2	196141487	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.307692
2	196141537	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.5625
2	196141547	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.421053
2	196141576	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.111111
2	196141577	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.111111
2	196141643	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.588235
2	196141649	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.555556
2	196141651	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.611111
2	196142082	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0434783
2	196142150	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.470588
2	196142151	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.125
2	196142187	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.166667
2	196142197	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.318182
2	196142223	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.1875
2	196142339	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0769231
2	196157010	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0588235
2	196158817	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.130435
2	196158822	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0869565
2	196158863	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.130435
2	196159408	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.173913
2	196159421	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0869565
2	196159558	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.115385
2	196159578	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0588235
2	196161797	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.133333
2	197264044	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
2	197275333	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.545455
2	200819163	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.157895
2	200819207	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.12
2	200819218	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.09375
2	200819309	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	200855744	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.047619
2	200855750	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.075
2	200855825	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.214286
2	200856312	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.363636
2	200856321	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.2
2	201117856	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.0769231
2	201117895	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.111111
2	202275732	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.230769
2	202275733	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202280229	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202291551	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202291552	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.133333
2	202299021	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.5
2	203298622	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203298857	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203298947	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203298963	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203299777	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203299780	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203299824	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203300628	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203300666	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.222222
2	203300670	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.294118
2	203300703	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.45
2	203300729	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203300996	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	203301036	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.08
2	203301076	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	203301117	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203301301	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.315789
2	203301326	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.473684
2	203301343	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.107143
2	203301371	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203301378	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.115385
2	203301393	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203301480	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203301505	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203301506	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.615385
2	203301532	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203301533	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.733333
2	203301540	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203302473	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.75
2	203302854	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203302867	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203302873	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.473684
2	203302876	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203302890	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.444444
2	203302943	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203302951	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203302968	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.230769
2	203302971	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203303239	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203303457	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203303829	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203304745	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.36
2	203304758	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203305001	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.136364
2	203305402	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	218227455	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.5
2	218227512	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.133333
2	218227526	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	218227527	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.235294
2	218230537	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218237858	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	218254597	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
2	218254624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
2	218254626	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
2	218254666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
2	218254748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
2	218254766	A->G	+	.	.	.	Intergenic	.	.	Alu	0.128205
2	218526408	A->G	-	ENSG00000135913	USP37	protein_coding	Intergenic	.	.	Alu	0.1875
2	222874225	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.5
2	222874234	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	223899663	A->G	-	ENSG00000085449	WDFY1	protein_coding	Intergenic	.	.	Alu	0.117647
2	224509381	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224509390	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.230769
2	224509393	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.230769
2	224509399	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224522638	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224530663	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	224530791	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224531161	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.3
2	224531173	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224531224	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224531261	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224531281	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.272727
2	224531292	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.384615
2	224531311	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.133333
2	224535311	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.333333
2	224580479	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224581671	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.285714
2	224581672	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.285714
2	224581673	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.428571
2	224581728	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	227501154	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	227501167	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.117647
2	227501183	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.1
2	227502069	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.133333
2	227502978	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227518624	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.153846
2	227518706	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
2	227518740	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.25
2	227519012	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.166667
2	227519027	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.294118
2	227519059	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.176471
2	227519064	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.263158
2	227519108	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227519110	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.363636
2	229260060	A->G	-	ENSG00000153823	PID1	protein_coding	Intergenic	.	.	Alu	0.1875
2	229833573	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.181818
2	229914993	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.117647
2	229915967	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	230716793	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.2
2	233071035	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233205877	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233361701	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.230769
2	233361717	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.1875
2	233361762	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.181818
2	233361768	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.3
2	237704246	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	237704256	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	237704270	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.117647
2	237704328	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	237704351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.157895
2	237704354	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.136364
2	237704374	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.130435
2	237704438	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0588235
2	237704754	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0967742
2	237704781	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.103448
2	237705406	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	237705407	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.322581
2	237705543	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	237705603	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.133333
2	237706705	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.212121
2	237706721	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.1875
2	237706728	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	237706745	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.111111
2	237706753	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.148148
2	237706825	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	237706828	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	237706833	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.103448
2	237710310	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.105263
2	237710963	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	240002167	A->G	-	ENSG00000130414	NDUFA10	protein_coding	Intergenic	.	.	Alu	0.2
3	100286995	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.25
3	100287023	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.1875
3	100287033	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.230769
3	100287213	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.285714
3	100291373	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.153846
3	100292039	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.181818
3	101674117	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.181818
3	105848985	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.307692
3	105848986	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.307692
3	105849578	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.25
3	119461596	A->G	-	ENSG00000176142	TMEM39A	protein_coding	Intergenic	.	.	Alu	0.4
3	121833249	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.272727
3	126458401	A->G	-	ENSG00000070476	ZXDC	protein_coding	Intergenic	.	.	Alu	0.2
3	127778795	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.454545
3	127778812	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.166667
3	127778825	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.583333
3	127778854	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.5
3	128741867	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128747199	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.266667
3	128747212	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
3	132368815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	132368825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	132368826	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	132368845	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	132368846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.46875
3	132368849	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	132368903	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
3	132368912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
3	132368974	A->G	+	.	.	.	Intergenic	.	.	Alu	0.473684
3	132368981	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
3	132369015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	132369020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.407407
3	132370172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	132370173	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	132370535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
3	132370552	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
3	132370604	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
3	132370619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	132370675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	132370676	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
3	132370732	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
3	132370741	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	132370749	A->G	+	.	.	.	Intergenic	.	.	Alu	0.590909
3	132370750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
3	132370811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	136331978	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.363636
3	138643573	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
3	138643708	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
3	138651978	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	138651988	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
3	138832473	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.133333
3	138832474	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.125
3	138832705	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.545455
3	138832707	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.272727
3	138832746	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.166667
3	141749152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	141888742	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.769231
3	143017833	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.2
3	146543116	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.277778
3	150433860	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.0909091
3	150433939	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.25
3	150434351	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.307692
3	152285752	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	152287139	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	152287165	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.181818
3	152292800	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.111111
3	152317753	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	152329569	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	152378096	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.117647
3	152378099	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.125
3	152378112	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.222222
3	152378127	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.142857
3	152378158	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.1
3	152378249	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.2
3	152378773	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.25
3	152378816	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.2
3	152378820	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.272727
3	152378899	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.181818
3	152378913	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	152378951	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.1875
3	152378990	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.2
3	152418411	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.285714
3	152418418	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.176471
3	152418463	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	158815037	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.5
3	158818848	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.466667
3	160413218	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intergenic	.	.	Alu	0.105263
3	160415094	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intergenic	.	.	Alu	0.153846
3	169972662	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.153846
3	169986779	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.2
3	169986826	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.153846
3	169986838	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.153846
3	169986840	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.363636
3	169989211	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.166667
3	169989223	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.133333
3	170168148	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.4
3	172051183	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	172051184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0851064
3	172051201	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0606061
3	172051202	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0625
3	172052184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172052185	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.121951
3	172052313	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.151515
3	172053539	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172053543	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172053552	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	172053651	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172053652	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0952381
3	172053693	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.294118
3	172053700	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	172136927	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.133333
3	172137494	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172147044	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.333333
3	172147056	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172147127	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172162188	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172165088	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172165113	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172165143	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.5
3	172165207	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1875
3	172165210	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.117647
3	172165245	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.3125
3	172165249	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	172165278	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.538462
3	172252541	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.272727
3	172339508	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	177167809	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177181314	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.714286
3	177181398	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	177193581	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	179374116	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.615385
3	179374117	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.461538
3	179374151	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.181818
3	179374156	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.3
3	179374183	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.25
3	180921203	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.3
3	180950944	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.692308
3	180950955	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.818182
3	182830208	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182862075	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	185756780	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185756853	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185770977	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.3
3	185771026	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.3
3	193628920	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.333333
3	193628962	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	193629018	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.130435
3	193629043	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.347826
3	193629059	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.263158
3	193632614	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.2
3	195418662	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195422515	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195427568	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.4
3	195427569	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.8
3	195427604	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.7
3	195428615	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.6
3	195428617	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.8
3	195520102	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.5
3	195520107	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.416667
3	195520535	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.333333
3	195520536	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.333333
3	195959417	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
3	196057709	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.2
3	196069075	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.133333
3	196069095	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.166667
3	196070503	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.235294
3	196070504	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.375
3	196070525	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.176471
3	196070695	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.516129
3	196070931	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.181818
4	102511403	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.2
4	102511425	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.05
4	102511493	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.153846
4	102754782	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.25
4	105152072	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	105152116	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.15
4	105157939	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.111111
4	107845090	A->G	+	ENSG00000164023	SGMS2	protein_coding	Intergenic	.	.	Alu	0.5
4	108627006	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.181818
4	109565907	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.4
4	109565938	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.4
4	118787568	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.588235
4	118787627	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.6
4	118806730	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.2
4	118806739	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.4
4	118806740	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.181818
4	118806892	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.25
4	119455546	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
4	139046042	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0505051
4	139046065	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0263158
4	139046129	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.025641
4	139046593	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.238095
4	139046776	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139047252	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0465116
4	139079000	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.272727
4	139079800	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.3
4	139079803	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.363636
4	139168840	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139168857	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139170443	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139170468	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139170973	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139171144	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	139171837	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.26087
4	139171841	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.5
4	143192325	A->G	+	ENSG00000170185	USP38	protein_coding	Intergenic	.	.	Alu	0.3
4	143192330	A->G	+	ENSG00000170185	USP38	protein_coding	Intergenic	.	.	Alu	0.2
4	143542892	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.25
4	151105464	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151105767	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151112789	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	153699924	A->G	+	ENSG00000137462	TLR2	protein_coding	Intergenic	.	.	Alu	0.125
4	158779858	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.153846
4	159119320	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.454545
4	165242577	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.2
4	165242680	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.166667
4	165290860	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.133333
4	173325830	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.2
4	173325831	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.2
4	173328644	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.1
4	173328652	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.15
4	173328689	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.125
4	173328734	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.363636
4	173328878	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.181818
4	173328881	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.181818
4	173380036	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
4	184781078	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.133333
4	184781086	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.133333
4	184781169	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.235294
4	184781179	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.25
4	184799629	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	184799644	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.111111
4	184799645	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.105263
4	184799787	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
4	184799789	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.176471
4	184822193	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0930233
4	184822487	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.097561
4	184822571	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.2
4	184822595	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.1
4	184822657	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.109091
4	184822733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.3125
4	184822847	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.148148
4	184822848	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0727273
4	184822867	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.173913
4	184822894	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.234043
4	184822908	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.230769
4	184822932	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0784314
4	184823781	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.219512
4	184823792	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.114754
4	184823797	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0810811
4	184823799	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0649351
4	184823819	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0649351
4	184823826	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.135135
4	184824264	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0740741
4	184824274	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.09375
4	184824286	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0606061
4	184824293	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.05
4	184824309	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0882353
4	184824369	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0731707
4	184824394	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0555556
5	112711670	A->G	+	ENSG00000134982	APC	protein_coding	Intergenic	.	.	Alu	0.272727
5	122804024	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.1875
5	122804466	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.176471
5	122804499	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	1
5	122804507	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.133333
5	122804511	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.357143
5	122805037	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122805144	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.166667
5	122805861	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.153846
5	122807030	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.3
5	122807031	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.454545
5	122807104	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131278146	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131284604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131285055	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131287604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.5
5	131287702	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.230769
5	131289409	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131289943	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131289972	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131298396	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131353107	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.545455
5	131353108	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131353715	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.4
5	131765170	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.181818
5	131765181	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.3
5	131793299	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.181818
5	131793302	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.153846
5	132913701	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132913708	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.15
5	132914024	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132914025	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132916082	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132916114	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132916116	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132916126	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132916129	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.454545
5	132919631	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132919632	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132942900	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132961273	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.25
5	132961278	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.454545
5	132961410	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132961420	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	134162358	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.363636
5	134207318	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.181818
5	134207322	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.272727
5	134207323	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.3
5	134377932	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134377981	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134378036	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.153846
5	134378040	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.307692
5	134378062	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.230769
5	134379980	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.142857
5	134380009	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.176471
5	134381500	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.272727
5	134381686	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.3
5	134381689	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134382573	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	138513369	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.105263
5	138514351	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.166667
5	138517972	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.235294
5	138517985	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.214286
5	138518379	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138518388	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.4
5	138518390	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.133333
5	138518391	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	138518393	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.666667
5	138533573	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.181818
5	138535196	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.230769
5	138573060	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.272727
5	138573211	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.235294
5	138573293	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138573317	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.307692
5	138573318	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.142857
5	138573404	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138573417	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	139277096	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.357143
5	139277245	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.153846
5	139277264	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.153846
5	139277265	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.142857
5	139302197	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139302201	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139302202	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139303282	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.636364
5	139303558	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139303573	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.181818
5	139303663	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.166667
5	139321627	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.4
5	139323644	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139323678	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.181818
5	139323683	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139323773	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139323836	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.166667
5	139323840	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.230769
5	139323846	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139328858	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.272727
5	139328911	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.384615
5	139566096	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.4
5	139566158	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.461538
5	139566560	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139566621	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.416667
5	139566630	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	139566638	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	140339673	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.416667
5	140340239	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.153846
5	141594485	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141611437	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.142857
5	142793860	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.125
5	142806167	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.15
5	142806193	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.133333
5	143079906	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	1
5	146235780	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.2
5	146235788	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.2
5	146235827	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.4
5	149532442	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.181818
5	149546166	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.153846
5	149546376	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	149547944	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.111111
5	149548138	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.222222
5	149548166	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149548322	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0540541
5	149548323	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0540541
5	149548484	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	149548491	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.1
5	149548564	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.111111
5	149548727	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.2
5	149548854	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.192308
5	150016222	A->G	+	ENSG00000113716	HMGXB3	protein_coding	Intergenic	.	.	Alu	0.4
5	150398105	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.333333
5	150398121	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.461538
5	150754841	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.166667
5	151203251	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.3
5	151204059	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.416667
5	151204060	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.384615
5	151204076	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.153846
5	151271784	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0735294
5	151271825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
5	151271865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.151515
5	151271873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
5	151271888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
5	151271915	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
5	151271997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0273973
5	151272035	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
5	151726810	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
5	154863504	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.357143
5	154866301	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.545455
5	157841881	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157847253	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.181818
5	157847936	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157847985	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	157848730	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.181818
5	157848734	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157848758	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157850933	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.25
5	157851443	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157851444	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	169708707	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.3
5	169852960	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.65
5	169853026	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.727273
5	169853033	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.6
5	169853153	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.833333
5	169853205	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.157895
5	169853216	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.533333
5	169853217	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.285714
5	169853225	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.538462
5	169855859	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	169855896	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.214286
5	169855904	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.230769
5	169855989	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.272727
5	169897457	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.1875
5	169929537	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.333333
5	169929538	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.75
5	172183079	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172183085	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.363636
5	172183095	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.166667
5	172185539	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172186179	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.133333
5	172186262	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.3
5	177187367	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	177262748	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	177262768	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	179826742	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	179826762	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	180800123	A->G	-	ENSG00000131446	MGAT1	protein_coding	Intergenic	.	.	Alu	0.214286
6	106091014	A->G	+	ENSG00000057657	PRDM1	protein_coding	Intergenic	.	.	Alu	0.454545
6	107922374	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.5
6	107922394	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.636364
6	107922468	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.545455
6	107955301	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.272727
6	107955309	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107955356	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.307692
6	107955390	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	108584780	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.5
6	108584798	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.6
6	108584826	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.4
6	108585726	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.357143
6	108585745	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.3
6	108599994	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.357143
6	110880057	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.3
6	110880772	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.153846
6	110969890	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
6	110969892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110969895	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
6	110969901	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	110969946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	110969961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	117685488	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.181818
6	117685498	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.7
6	117685500	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.7
6	117685541	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.454545
6	122414682	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.181818
6	122466001	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.181818
6	122466018	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.117647
6	122466056	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.125
6	122466122	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.142857
6	132688931	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.416667
6	132689017	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.125
6	132689021	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.117647
6	132689026	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.153846
6	132689089	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.185185
6	132689128	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.105263
6	132689153	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0869565
6	132691813	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.1
6	132713040	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.230769
6	136786285	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0804598
6	136786308	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.027027
6	136786329	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0294118
6	136786860	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0697674
6	136786863	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.6
6	136786874	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.315789
6	136786879	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.047619
6	136786884	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0307692
6	136786890	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.031746
6	136786898	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.194444
6	136786917	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.136986
6	136789069	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.205882
6	136789110	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0526316
6	136789114	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.378378
6	136789195	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.142857
6	136789199	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.111111
6	136789228	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.230769
6	136789235	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0666667
6	136789265	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.075
6	136789289	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0588235
6	137217989	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.142857
6	139140997	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.363636
6	139142133	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.3
6	144163674	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.166667
6	144163826	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.153846
6	144164730	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.230769
6	144164749	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.357143
6	144164755	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.357143
6	144164757	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.285714
6	144174577	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.153846
6	144174645	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0714286
6	144175143	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.125
6	144175446	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.166667
6	144175516	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.142857
6	144178957	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.214286
6	144179023	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.136364
6	144180584	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.130435
6	144190813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	147211039	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.125
6	147211716	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.125
6	147213318	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	149573226	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149573230	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.916667
6	149573260	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.4
6	149592978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	149592997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	149593006	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	154737421	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.272727
6	154739066	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.545455
6	154739086	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.363636
6	154740821	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	154753974	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.181818
6	154759931	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3
6	154778689	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	156799730	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	156835846	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	156835854	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.363636
6	156835881	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	157832761	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.263158
6	157832772	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.157895
6	157846856	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.5
6	157847147	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.428571
6	157847286	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.181818
6	157847312	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.230769
6	157847371	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.166667
6	157864867	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.166667
6	157866383	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.375
6	159742794	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.217391
6	159742865	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.125
6	159743227	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159743256	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.25
6	159743267	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	159743281	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.15
6	159743299	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.157895
6	159971895	A->G	+	ENSG00000197081	IGF2R	protein_coding	Intergenic	.	.	Alu	0.2
6	159971909	A->G	+	ENSG00000197081	IGF2R	protein_coding	Intergenic	.	.	Alu	0.181818
6	163443447	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.142857
6	163459741	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.410256
6	163493583	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.185185
6	163508630	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.133333
7	100343661	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	100343662	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	100343967	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.8
7	100344020	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
7	100344031	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
7	104942747	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.125
7	105028572	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.416667
7	105029113	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.133333
7	105042023	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105042056	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.333333
7	105042108	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105042225	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105042226	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.133333
7	105044080	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105048115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105048178	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.272727
7	105537234	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.181818
7	106880805	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.2
7	106880809	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.181818
7	106880812	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.25
7	106880881	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.181818
7	112454966	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.272727
7	112455292	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.111111
7	112455435	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.181818
7	116875009	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.166667
7	116875686	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.363636
7	116891754	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.2
7	128548132	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	128640016	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	128659212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
7	128659224	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
7	128659234	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	128659276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
7	129948315	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.181818
7	130899316	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.4
7	130954541	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0909091
7	130954730	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0833333
7	130957813	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0967742
7	130957836	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.12
7	130957858	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	130957862	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0666667
7	130957983	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130958409	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0909091
7	130959826	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0588235
7	139373255	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.428571
7	139382628	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139395692	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139395853	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.7
7	139395882	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.714286
7	139772858	A->G	-	ENSG00000064393	HIPK2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	139772859	A->G	-	ENSG00000064393	HIPK2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	140461398	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140464540	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140465342	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140471138	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.133333
7	143299053	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.272727
7	147842183	A->G	-	ENSG00000174469	CNTNAP2	protein_coding	Intergenic	.	.	Alu	1
7	148827928	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.6
7	148828493	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.75
7	148828540	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.181818
7	148828541	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.181818
7	148828556	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148828561	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148828579	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.166667
7	148870807	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.25
7	151495779	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.3
7	151500937	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.153846
7	152310905	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152404455	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152409076	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152409087	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.230769
7	152409137	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.6
7	152409171	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152409177	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152409279	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152416884	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152416887	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
7	152424216	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152424561	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152425384	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152425510	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	152425514	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152430663	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1875
7	152430670	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.214286
7	152433104	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.4
7	152433110	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	157359604	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.272727
7	157373005	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.103448
7	157373565	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0731707
7	157376671	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.25
7	158797349	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158820806	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	158823036	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.151515
7	158823048	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.103448
7	158823058	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0625
7	158823081	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.222222
7	158823110	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.5
7	158823598	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.428571
7	158823599	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
8	100304247	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.230769
8	100713582	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	100713656	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.1
8	100713773	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.107143
8	100714539	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.347826
8	100714551	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.1
8	100714587	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	100716159	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.193548
8	100716160	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.133333
8	100716230	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	100716236	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.162791
8	100716239	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0454545
8	100716256	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0357143
8	100716279	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.25641
8	100716289	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0465116
8	100716293	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.047619
8	100716314	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.176471
8	100716344	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.05
8	100716352	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	100716393	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	100717113	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.275862
8	100717148	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.206897
8	100717149	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.172414
8	100717175	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.103448
8	100717215	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.45
8	100717221	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.25
8	100928090	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.272727
8	100928681	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.176471
8	100928686	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.1875
8	100929297	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.1
8	100929324	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.333333
8	100929337	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.266667
8	100929356	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.133333
8	102399493	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102407600	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.3
8	102407614	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.3
8	102407615	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.3
8	109471878	A->G	+	ENSG00000205038	PKHD1L1	protein_coding	Intergenic	.	.	Alu	1
8	120772519	A->G	-	ENSG00000248318	AC104958.1	antisense	Intergenic	.	.	Alu	0.2
8	123379077	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.214286
8	124696596	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.16
8	124696605	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.347826
8	125052806	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.545455
8	128024390	A->G	+	ENSG00000249859	PVT1	lincRNA	Intergenic	.	.	Alu	0.2
8	129848625	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	129890675	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130000538	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.133333
8	130000545	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	130000600	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	130002202	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0740741
8	130353788	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.461538
8	130353795	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.583333
8	130353814	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.214286
8	130353819	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.153846
8	131909350	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.25
8	131909426	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.166667
8	131909466	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.545455
8	133061126	A->G	-	ENSG00000042832	TG	protein_coding	Intergenic	.	.	Alu	0.0869565
8	133065726	A->G	-	ENSG00000042832	TG	protein_coding	Intergenic	.	.	Alu	0.125
8	133277338	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133277346	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133280707	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.2
8	134827114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
8	134827144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
8	134827167	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
8	134827168	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	134827287	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
8	134827668	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
8	140596137	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	141185640	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.3
8	144212115	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.25
8	144212183	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.09375
8	144212184	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.121212
8	144212209	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.0882353
8	144212210	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	144212213	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	144212294	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.0576923
8	144212328	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.0344828
8	144212689	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.133333
8	144212690	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.2
8	144212865	A->G	+	ENSG00000179832	MROH1	protein_coding	Intergenic	.	.	Alu	0.0612245
9	100023951	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.181818
9	100024110	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.153846
9	104914378	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.230769
9	104914456	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	104914493	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.153846
9	104919526	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104919536	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.125
9	104920597	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.538462
9	105253466	A->G	+	ENSG00000070214	SLC44A1	protein_coding	Intergenic	.	.	Alu	0.384615
9	105253473	A->G	+	ENSG00000070214	SLC44A1	protein_coding	Intergenic	.	.	Alu	0.133333
9	105253479	A->G	+	ENSG00000070214	SLC44A1	protein_coding	Intergenic	.	.	Alu	0.533333
9	105253592	A->G	+	ENSG00000070214	SLC44A1	protein_coding	Intergenic	.	.	Alu	0.315789
9	105253952	A->G	+	ENSG00000070214	SLC44A1	protein_coding	Intergenic	.	.	Alu	0.2
9	112038694	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
9	112038737	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	112038738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	112038775	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
9	112039328	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
9	112039349	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
9	112039353	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	112039355	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
9	112039420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
9	112040181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
9	112040182	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
9	112040209	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
9	112040223	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
9	112040243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
9	112040260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	112040302	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
9	112040326	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	112040343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
9	113170394	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.142857
9	113293706	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	123599586	A->G	-	ENSG00000119522	DENND1A	protein_coding	Intergenic	.	.	Alu	0.363636
9	125784182	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.333333
9	125784184	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.133333
9	125790419	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	125800833	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.111111
9	125800840	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.157895
9	125800882	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.176471
9	125800883	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.117647
9	125800892	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.125
9	125800933	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.1
9	125800950	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.285714
9	125836917	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.176471
9	125838235	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	125839434	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.473684
9	125839435	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.142857
9	125839453	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.421053
9	125839457	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.157895
9	125862480	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125862516	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	126810011	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.166667
9	127791047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
9	127791388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
9	130704988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	130705019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	130705042	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130705043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	130705069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130705222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130705232	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130705811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
9	130706157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130706472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130706516	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	131411006	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131411009	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	134904522	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0252101
9	134904553	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0298507
9	134904591	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
9	134904613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0277778
9	134904656	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0289855
9	134904711	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0434783
9	134904728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
9	134905536	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0361446
9	134905541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
9	134905544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0253165
9	134905556	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
9	134905560	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0416667
9	134905576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.028169
9	134905595	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0344828
9	134905718	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
9	134905756	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	137631598	A->G	+	ENSG00000283411	AL590627.2	processed_transcript	Intergenic	.	.	Alu	0.384615
10	100253148	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.2
10	100253152	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.4
10	101810862	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101810918	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.333333
10	101810923	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.384615
10	101810928	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.125
10	101810942	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.125
10	101811264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4
10	101811670	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4
10	102278001	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.153846
10	102278002	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.230769
10	102278373	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.166667
10	102278406	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.117647
10	103161293	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103161301	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.636364
10	103167770	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103167858	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.416667
10	103169738	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103173383	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103177584	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	103177637	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.266667
10	103177660	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.117647
10	103177673	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103177686	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.190476
10	103178050	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103179650	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103179688	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.230769
10	103180487	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.108108
10	110925494	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.388889
10	110925557	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.190476
10	110925558	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.190476
10	110925570	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	110925693	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.216216
10	119052535	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.3
10	119072521	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.5
10	119072525	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.384615
10	119072590	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.125
10	119072591	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.333333
10	119072630	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.3
10	125147646	A->G	-	ENSG00000175029	CTBP2	protein_coding	Intergenic	.	.	Alu	0.214286
10	128051962	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0645161
10	128051980	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0740741
10	128051988	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.12
10	128051992	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.111111
10	128053131	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0666667
10	128053144	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0689655
10	128053166	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.1
10	128053183	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0526316
10	128053226	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.135135
10	128053854	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.272727
10	128054658	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.3
10	133300569	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.2
10	133410775	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.153846
11	102436291	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.181818
11	117033512	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117038787	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117046661	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117053157	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117053165	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117076908	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.428571
11	117076984	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.5
11	117077008	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117077040	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.315789
11	117077056	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	117077073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.178571
11	117077104	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117077152	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117085734	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.363636
11	117085764	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.454545
11	117085768	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117088161	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117088729	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	117088737	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.173913
11	117146199	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.5
11	117153989	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.2
11	118753566	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.166667
11	118760405	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.7
11	118766011	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.272727
11	118766623	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	122657382	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122672381	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122672455	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.266667
11	122672465	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122672483	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122672587	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.1875
11	122672588	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122672600	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122676174	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	126346939	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.111111
11	126346943	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.352941
11	126346969	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.111111
11	126346993	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.133333
12	100035640	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.214286
12	100035643	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.133333
12	101815550	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101823447	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101829390	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101901807	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0714286
12	103934997	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.117647
12	104491691	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104492303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104492770	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.294118
12	104492779	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.210526
12	104492953	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.176471
12	104492954	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.294118
12	104493843	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104493898	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.08
12	104493903	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.137931
12	104493923	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104493924	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.09375
12	104493928	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0645161
12	104493936	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.368421
12	104493949	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0555556
12	104493963	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0666667
12	104494017	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0967742
12	104518076	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104537773	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104616605	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.3
12	104616738	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104643303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.263158
12	108620863	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
12	108620875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9
12	108621127	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
12	108819761	A->G	-	ENSG00000084112	SSH1	protein_coding	Intergenic	.	.	Alu	0.2
12	110287868	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.363636
12	110292666	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.3
12	110292707	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.461538
12	110292712	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.384615
12	110323774	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.166667
12	110328802	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.5
12	110328803	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.4
12	110442131	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.2
12	110442141	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.181818
12	110581149	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.133333
12	116155340	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116155341	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.4
12	116155390	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.357143
12	116169791	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116177996	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.333333
12	116191736	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	116191737	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116193016	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.214286
12	116193046	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	116207273	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116208150	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.117647
12	116221118	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.117647
12	116254629	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	118315003	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356746	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.111111
12	118370013	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	122488123	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.428571
12	122488128	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.2
12	122509326	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	122509962	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.133333
12	122511963	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.8
12	122511977	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	122511980	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.25
12	122512000	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.153846
12	122512493	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.294118
12	122512502	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.285714
12	122512568	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.125
12	122512574	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.588235
12	122514024	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.413043
12	122514338	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	122514361	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.272727
12	122514362	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	122515500	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0833333
12	123322330	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.166667
12	123326700	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.2
12	123326708	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.307692
12	123326734	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.2
12	123435615	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123435617	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.25
12	123435631	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.157895
12	123435679	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	131728756	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	131728826	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.2
12	131899435	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.166667
12	131899456	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.166667
12	132826198	A->G	+	ENSG00000090615	GOLGA3	protein_coding	Intergenic	.	.	Alu	1
13	109775204	A->G	-	ENSG00000185950	IRS2	protein_coding	Intergenic	.	.	Alu	0.117647
14	100363513	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.416667
14	100363581	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.636364
14	100370861	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.181818
14	101814565	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.15
14	101814594	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.444444
14	101816093	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.8
14	101816120	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.363636
14	101817138	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.333333
14	101817139	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.166667
14	101996654	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.133333
14	102003529	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.1875
14	102346781	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.571429
14	102346782	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.133333
14	102346976	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.357143
14	102346979	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.4
14	102596333	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.3
14	102599904	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.333333
14	102612059	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102781533	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.117647
14	102804032	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102804059	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102804587	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102804600	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	105668199	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intergenic	.	.	Alu	0.115016
15	101221276	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.181818
15	101221277	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.166667
15	101229715	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.181818
15	101229719	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.454545
15	101229741	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.454545
15	101230119	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.181818
15	101230120	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.181818
15	101230121	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.181818
MT	1420	A->G	-	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	0.0738151
MT	1438	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	750	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
X	3822442	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intron	.	.	Alu	0.3
X	73947201	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0384615
X	73947216	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0701754
X	73947228	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0461538
X	74010623	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.7
X	74197649	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.4
4	780350	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.166667
19	221166	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.736842
1	8907733	A->G	-	ENSG00000232208	AL139415.1	processed_pseudogene	Intron	.	.	Alu	1
6	6169402	A->G	-	ENSG00000263572	MIR7853	miRNA	Intron	.	.	Alu	0.5
11	6714100	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
11	6714112	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.454545
12	6953228	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	9648777	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intron	.	.	Alu	0.61194
12	9658610	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.307692
12	9659679	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.181818
12	9659685	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.272727
16	2672243	A->G	-	ENSG00000260565	ERVK13-1	processed_transcript	Intron	.	.	Alu	0.0833333
18	9115764	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.2
1	20649585	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.8
1	20649678	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.133333
1	20649681	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.153846
1	20649682	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.230769
1	20649690	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.272727
1	22059661	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intron	.	.	Alu	0.111111
1	22059670	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intron	.	.	Alu	0.125
1	23975231	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intron	.	.	Alu	1
1	31933671	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.25
1	45658766	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.307692
1	84578072	A->G	+	ENSG00000284882	AL359762.1	bidirectional_promoter_lncRNA	Intron	.	.	Alu	0.153846
1	84578126	A->G	+	ENSG00000284882	AL359762.1	bidirectional_promoter_lncRNA	Intron	.	.	Alu	0.388889
2	61502527	A->G	-	ENSG00000082898	XPO1	protein_coding	Intron	.	.	Alu	0.2
2	61502536	A->G	-	ENSG00000082898	XPO1	protein_coding	Intron	.	.	Alu	0.142857
2	65011477	A->G	+	ENSG00000115902	SLC1A4	protein_coding	Intron	.	.	Alu	0.105263
2	65011478	A->G	+	ENSG00000115902	SLC1A4	protein_coding	Intron	.	.	Alu	0.263158
2	65011542	A->G	+	ENSG00000115902	SLC1A4	protein_coding	Intron	.	.	Alu	0.0869565
2	86562235	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.333333
3	14944582	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0212766
3	14944891	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0387097
3	14944984	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0272109
3	14944985	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0201342
3	37173003	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intron	.	.	Alu	0.0444444
3	49373322	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.117647
3	49373325	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.111111
3	50112949	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.3
3	50113054	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.285714
4	40209545	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.181818
4	82893437	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intron	.	.	Alu	0.5
4	98026084	A->G	+	ENSG00000242697	RPL5P12	processed_pseudogene	Intron	.	.	Alu	1
5	34175891	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.416667
5	43572496	A->G	-	ENSG00000248092	NNT-AS1	antisense	Intron	.	.	Alu	0.25
5	44816468	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.115385
5	44816481	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.384615
5	44818079	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.62069
5	66165869	A->G	+	ENSG00000153914	SREK1	protein_coding	Intron	.	.	Alu	0.615385
5	70479075	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
5	70479080	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.15625
5	80483087	A->G	-	ENSG00000249042	AC008771.1	antisense	Intron	.	.	Alu	0.153846
5	94704762	A->G	-	ENSG00000133302	SLF1	protein_coding	Intron	.	.	Alu	0.266667
6	29889346	A->G	+	ENSG00000206341	HLA-H	unprocessed_pseudogene	Intron	.	.	Alu	1
6	32662836	A->G	-	ENSG00000179344	HLA-DQB1	protein_coding	Intron	.	.	Alu	0.7
6	42940416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.125
6	42940436	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0645161
6	42940462	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0555556
6	42941511	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0487805
6	42941586	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0666667
6	42943924	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.352941
6	42943938	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.2
6	42947683	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.3
6	42947695	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.3
6	57959039	A->G	-	ENSG00000215190	LINC00680	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.1875
7	48106494	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.294118
7	48106508	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.1875
7	48106573	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.363636
7	48106586	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.08
7	48106588	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.166667
7	72829753	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.527778
7	72999529	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.478261
7	84939766	A->G	-	ENSG00000280325	AC074183.2	TEC	Intron	.	.	Alu	1
7	99081289	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intron	.	.	Alu	0.2
8	55893809	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.129032
8	55893812	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.129032
8	55893893	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.1
8	55893906	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0689655
8	55893924	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.125
8	55895588	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0952381
8	55895608	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.15
8	60966015	A->G	-	ENSG00000254802	AC022182.2	lincRNA	Intron	.	.	Alu	0.125
8	60966016	A->G	-	ENSG00000254802	AC022182.2	lincRNA	Intron	.	.	Alu	0.125
9	34201344	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.1
9	34201369	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.111111
9	34201476	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.222222
9	40992722	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
9	40993414	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.196721
9	40993428	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.242424
9	41008967	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.313953
9	41011651	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.106667
10	28523213	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0517241
10	28523218	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0344828
10	28523687	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0333333
10	42614292	A->G	-	ENSG00000196693	ZNF33B	protein_coding	Intron	.	.	Alu	0.0857143
10	73505615	A->G	+	ENSG00000221817	PPP3CB-AS1	processed_transcript	Intron	.	.	Alu	0.157895
10	73505616	A->G	+	ENSG00000221817	PPP3CB-AS1	processed_transcript	Intron	.	.	Alu	0.105263
10	73778875	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.0740741
10	73779019	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.1
10	73779153	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.2
10	79722492	A->G	-	ENSG00000225484	NUTM2B-AS1	antisense	Intron	.	.	Alu	0.4
11	16756339	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.8
11	16756344	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.142857
11	62854118	A->G	-	ENSG00000255717	SNHG1	processed_transcript	Intron	.	.	Alu	0.5
11	65180133	A->G	-	ENSG00000254614	AP003068.2	antisense	Intron	.	.	Alu	0.117647
11	65441344	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0327103
11	65441417	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0466667
11	65442590	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0516432
11	65442591	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.062201
11	65442619	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.455497
11	65442627	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.110553
11	65442662	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0473684
11	65442670	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.104712
11	65442702	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.057971
11	65442703	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0861244
11	90212902	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.142857
11	93733708	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.6875
12	47209309	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intron	.	.	Alu	0.0425532
12	53296592	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.272727
12	53296612	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.7
12	53296676	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.133333
12	53297147	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.454545
12	53297204	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.2
12	53297298	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.3
12	53297349	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.181818
12	53297350	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.181818
12	68649281	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.166667
12	68649993	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.2
12	69255041	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intron	.	.	Alu	0.666667
12	93500865	A->G	+	ENSG00000198015	MRPL42	protein_coding	Intron	.	.	Alu	0.0512821
12	98453951	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
12	98454131	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.363636
12	98454132	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.545455
13	32524825	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.454545
13	32524839	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.2
13	40810767	A->G	+	ENSG00000207652	MIR621	miRNA	Intron	.	.	Alu	0.0681818
14	58293799	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.03125
14	58293823	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0588235
14	58293896	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0454545
14	58293922	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0392157
14	58294014	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.142857
14	58294015	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.171429
14	58295578	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.025641
14	61717001	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intron	.	.	Alu	0.578947
15	22672802	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
15	30484647	A->G	+	ENSG00000215302	AC127502.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.545455
15	34407712	A->G	-	ENSG00000175265	GOLGA8A	protein_coding	Intron	.	.	Alu	0.625
15	41234174	A->G	+	ENSG00000187446	CHP1	protein_coding	Intron	.	.	Alu	0.230769
15	41302335	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0289855
15	41302365	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0277778
15	41305357	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.037037
15	41308730	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.105263
15	41308851	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.142857
15	44733678	A->G	+	ENSG00000185880	TRIM69	protein_coding	Intron	.	.	Alu	0.230769
15	51567974	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.727273
15	51567975	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.6
15	74026374	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.2
15	74026432	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.105263
15	74027366	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.181818
15	74466044	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.2
15	74466088	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.08
15	78890672	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.285714
15	89094224	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.117647
15	89094225	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.1875
16	21519844	A->G	-	ENSG00000258186	SLC7A5P2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.056338
16	21810814	A->G	-	ENSG00000248124	RRN3P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.277778
16	29834400	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.307692
16	29834402	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.384615
16	29834410	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.142857
16	31062642	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.454545
16	31122518	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.758621
16	31122589	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.2
16	31122598	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.388889
16	31123772	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0571429
16	31182742	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.3
16	31182817	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.125
16	31183182	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.153846
16	31183186	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.153846
16	56940367	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intron	.	.	Alu	0.0338983
16	56940870	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intron	.	.	Alu	0.1
16	56940878	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intron	.	.	Alu	0.269231
16	56940945	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intron	.	.	Alu	0.0769231
16	67135850	A->G	+	ENSG00000125149	C16orf70	protein_coding	Intron	.	.	Alu	0.2
17	27297266	A->G	+	ENSG00000109046	WSB1	protein_coding	Intron	.	.	Alu	0.2
17	28721231	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.1
17	29403768	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intron	.	.	Alu	0.133333
17	30636278	A->G	+	ENSG00000250462	LRRC37BP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.7
17	30964958	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intron	.	.	Alu	0.166667
17	30965094	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intron	.	.	Alu	0.0952381
17	30965095	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intron	.	.	Alu	0.190476
17	44176236	A->G	-	ENSG00000267080	ASB16-AS1	antisense	Intron	.	.	Alu	0.105263
17	47082195	A->G	-	ENSG00000262879	AC068152.1	processed_transcript	Intron	.	.	Alu	0.0909091
17	47082245	A->G	-	ENSG00000262879	AC068152.1	processed_transcript	Intron	.	.	Alu	0.0606061
17	58476736	A->G	-	ENSG00000266648	SETP3	processed_pseudogene	Intron	.	.	Alu	1
17	68115148	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
17	68115175	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
17	81879259	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0810811
17	81879862	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0952381
17	81880199	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.136364
17	81880205	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.333333
17	81880212	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.208333
17	81880230	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.142857
17	81880335	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.2
17	81880345	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.2
17	81880348	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.153846
17	81880371	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.142857
17	81880374	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.266667
17	81880732	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0714286
17	81880744	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0769231
17	81880808	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.153846
17	81880815	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.277778
17	81880816	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.222222
17	81880912	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.117647
17	82272182	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.153846
18	49390780	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.1
18	49390794	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.166667
18	63396772	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.181818
19	18946157	A->G	+	ENSG00000269019	HOMER3-AS1	antisense	Intron	.	.	Alu	0.272727
19	18946158	A->G	+	ENSG00000269019	HOMER3-AS1	antisense	Intron	.	.	Alu	0.272727
19	18946178	A->G	+	ENSG00000269019	HOMER3-AS1	antisense	Intron	.	.	Alu	0.2
19	48257491	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0357143
19	48257507	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.031746
19	48257523	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.030303
19	48257532	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.030303
19	48257643	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0454545
19	48257739	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.125
19	53214335	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.307692
19	58582511	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
19	58584123	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0810811
20	36934718	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0833333
20	36934730	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.115385
20	36934751	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.2
20	36934796	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0952381
20	36934797	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.333333
20	36934803	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.692308
20	36934819	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.137931
20	36934823	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0666667
20	36934846	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0689655
20	36934933	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.227273
20	36934937	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.25
1	120447148	A->G	+	ENSG00000270231	NBPF8	unprocessed_pseudogene	Intron	.	.	Alu	0.227273
1	121571348	A->G	+	ENSG00000231752	EMBP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.909091
1	145201194	A->G	-	ENSG00000272419	AC241585.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
1	150573735	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intron	.	.	Alu	0.04
1	161595915	A->G	+	ENSG00000273112	AL590385.2	processed_transcript	Intron	.	.	Alu	0.238095
1	167641668	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0769231
1	178006643	A->G	-	ENSG00000242193	CRYZL2P	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.075
1	179869117	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.1
1	224191133	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intron	.	.	Alu	0.1
1	224413185	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.272727
2	178433678	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.0606061
2	196154182	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.222222
2	200819121	A->G	+	ENSG00000082153	BZW1	protein_coding	Intron	.	.	Alu	0.2
2	218235276	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.125
2	218235279	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.1875
2	218235293	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.153846
2	218235316	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.214286
2	218235318	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.125
2	218235364	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.133333
2	218235420	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.363636
2	218235426	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.272727
2	218235450	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.2
2	218235861	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.2
2	218235983	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.384615
2	218236022	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.214286
2	218236065	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.125
2	218236685	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.5
2	218255967	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.125
2	218256447	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.15
2	218256448	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.263158
2	218256579	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.117647
3	149982992	A->G	-	ENSG00000224831	TMEM183B	processed_pseudogene	Intron	.	.	Alu	1
3	172337926	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intron	.	.	Alu	0.230769
3	186788722	A->G	+	ENSG00000156976	EIF4A2	protein_coding	Intron	.	.	Alu	0.574074
3	196400671	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.230769
3	196400672	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.25
3	196905029	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.230769
4	102811494	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.208333
4	102811619	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.206897
4	102811664	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.111111
4	102812272	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0666667
4	119456428	A->G	+	ENSG00000250950	AC093752.2	lincRNA	Intron	.	.	Alu	0.272727
4	119456436	A->G	+	ENSG00000250950	AC093752.2	lincRNA	Intron	.	.	Alu	0.142857
4	151103269	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.235294
4	151103652	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0416667
4	151103669	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0666667
5	115839014	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.181818
5	140575802	A->G	-	ENSG00000283155	AC116353.4	processed_transcript	Intron	.	.	Alu	0.0540541
5	140575855	A->G	-	ENSG00000283155	AC116353.4	processed_transcript	Intron	.	.	Alu	0.0357143
5	140575862	A->G	-	ENSG00000283155	AC116353.4	processed_transcript	Intron	.	.	Alu	0.0909091
5	180835080	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.928571
5	180835083	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.241379
5	180835372	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.454545
5	180835373	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.727273
5	180835420	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.12
5	181313887	A->G	+	ENSG00000238035	AC138035.1	lincRNA	Intron	.	.	Alu	0.769231
6	138951087	A->G	-	ENSG00000135597	REPS1	protein_coding	Intron	.	.	Alu	0.2
7	130945478	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.5
7	130959940	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.116279
8	129847229	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intron	.	.	Alu	0.25
8	129847257	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intron	.	.	Alu	0.2
9	112033776	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.166667
9	112035931	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.333333
9	112036755	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.235294
9	112036765	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.176471
9	112036771	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.176471
9	112036800	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.214286
9	112036801	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.214286
9	113151776	A->G	+	ENSG00000136867	SLC31A2	protein_coding	Intron	.	.	Alu	0.12
9	113151780	A->G	+	ENSG00000136867	SLC31A2	protein_coding	Intron	.	.	Alu	0.08
9	129347284	A->G	+	ENSG00000233901	LINC01503	lincRNA	Intron	.	.	Alu	0.09375
9	129503384	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.153846
9	129506107	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.133333
9	136420079	A->G	+	ENSG00000165688	PMPCA	protein_coding	Intron	.	.	Alu	0.4
10	103169429	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intron	.	.	Alu	0.416667
10	112449570	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0666667
10	119105346	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.3
12	110325805	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intron	.	.	Alu	0.117647
12	110325854	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intron	.	.	Alu	0.181818
12	121213972	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.25
12	121213994	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.166667
12	121214055	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.153846
12	121215774	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.25
12	122507181	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.578947
12	122507231	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.235294
12	122508053	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.133333
12	122880580	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.2
12	123458989	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.181818
14	102347326	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.181818
14	102347332	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.6
14	105668389	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intron	.	.	Alu	1
X	101009607	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.5
X	101009638	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.846154
X	110174105	A->G	+	ENSG00000157600	TMEM164	protein_coding	three_prime_utr	.	.	Alu	0.0642857
X	119538631	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123909032	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123909068	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.15
X	123909129	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.173913
X	123909231	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.3
X	123912587	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	123912990	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123913042	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	1309838	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	1310009	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	1310013	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.35
X	1310016	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	1310042	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.125
X	1310044	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	1310045	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	1310048	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	1310131	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	1310144	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	135963678	A->G	-	ENSG00000169446	MMGT1	protein_coding	three_prime_utr	.	.	Alu	0.108434
X	150767751	A->G	-	ENSG00000102181	CD99L2	protein_coding	three_prime_utr	.	.	Alu	0.128205
X	150767753	A->G	-	ENSG00000102181	CD99L2	protein_coding	three_prime_utr	.	.	Alu	0.21519
X	150767867	A->G	-	ENSG00000102181	CD99L2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	15782922	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.08
X	15782972	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.555556
X	15782982	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	15783008	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.0408163
X	15783445	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.0789474
X	15783688	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	15783716	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.909091
X	15783756	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	15783968	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	15783988	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.6
X	15786076	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.117647
X	15786128	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.107143
X	16763055	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	16763063	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.4375
X	16763078	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16763086	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	16763087	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	16763106	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.35
X	16763143	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
X	16763152	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.666667
X	16763159	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	16763175	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.15625
X	16763188	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
X	16763192	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.212121
X	16763206	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	16763211	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.12
X	16763230	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.47619
X	16763235	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	16763376	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	16763379	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	16763392	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16763447	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763453	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763482	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	16763538	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	16763564	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.5
X	16763575	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	16763615	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	16763616	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	16763617	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	16763629	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	16763635	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.4
X	16763978	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16764004	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.4
X	16764032	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	16764040	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	16764041	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	16764049	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	16764636	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	16764642	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	16764743	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	16764860	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	16764925	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.075
X	16764957	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
X	16842416	A->G	+	ENSG00000086712	TXLNG	protein_coding	three_prime_utr	.	.	Alu	0.0967742
X	23703538	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.2
X	23703590	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	2487001	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.504425
X	2906253	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.025
X	2906853	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0388889
X	2906966	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.030303
X	2907073	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.11828
X	302007	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	1
X	46604627	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	71465008	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	71465178	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.0547945
X	71465202	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.130952
X	77827481	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
X	77828014	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.025641
X	77828200	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0367647
X	77828321	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.02
X	77828505	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0214592
X	77828563	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0342857
X	78129038	A->G	+	ENSG00000102144	PGK1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	85091006	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	85091099	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	85091337	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	85091342	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	85091365	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.3
X	85091384	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.2
17	518044	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	1563339	A->G	-	ENSG00000160075	SSU72	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	1635543	A->G	-	ENSG00000248333	CDK11B	protein_coding	three_prime_utr	.	.	Alu	1
1	1663539	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.06
1	1664061	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	1664136	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	6222427	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	6222527	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.205882
1	6522116	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.2
1	6522285	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	6522410	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	6522441	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	6522467	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	6523006	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.225806
1	6523013	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	6523049	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	6523053	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	6523078	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	6523354	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	6523455	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.3
1	6523532	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	6523533	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	6525168	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	6525175	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	7920413	A->G	-	ENSG00000049249	TNFRSF9	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9100841	A->G	-	ENSG00000180758	GPR157	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	9103236	A->G	-	ENSG00000180758	GPR157	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9103269	A->G	-	ENSG00000180758	GPR157	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	9267020	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	9267968	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9267999	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.1
1	9268072	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	9268078	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	9271059	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.028169
1	9583096	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.3
1	9583097	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9584832	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.1
1	9584876	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9584880	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9929562	A->G	-	ENSG00000162441	LZIC	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9982836	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	9982852	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	9982879	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	9982897	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9982929	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	9982930	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	9983244	A->G	+	ENSG00000241326	AL603962.1	sense_intronic	three_prime_utr	.	.	Alu	0.142857
1	9983257	A->G	+	ENSG00000241326	AL603962.1	sense_intronic	three_prime_utr	.	.	Alu	0.125
1	9983267	A->G	+	ENSG00000241326	AL603962.1	sense_intronic	three_prime_utr	.	.	Alu	0.117647
1	9983300	A->G	+	ENSG00000241326	AL603962.1	sense_intronic	three_prime_utr	.	.	Alu	0.230769
4	1387134	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	1387152	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2839588	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	2839593	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	2839785	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	2839824	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	2839825	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.6
4	2839844	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2840203	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	2938433	A->G	-	ENSG00000249673	NOP14-AS1	antisense	three_prime_utr	.	.	Alu	0.0357143
6	3020549	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	3020587	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	3020595	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.208333
6	3020602	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	3020618	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	3021214	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	3021231	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.4
6	3021232	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.466667
6	3021925	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	3022160	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.125
6	3022224	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.6
6	3022225	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	3022278	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	3022300	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	3022310	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	3022372	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	3022396	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	3022464	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.4375
6	3022474	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.823529
6	3022491	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.125
6	7283345	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.142857
6	7283648	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.08
6	7283653	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0833333
6	7283677	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.142857
6	7285597	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0571429
7	2234574	A->G	-	ENSG00000122687	MRM2	protein_coding	three_prime_utr	.	.	Alu	0.025
7	7246205	A->G	+	ENSG00000106392	C1GALT1	protein_coding	three_prime_utr	.	.	Alu	0.368421
8	6643358	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.4
8	6643394	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	6643448	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	8687026	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
11	9750194	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0454545
12	6819852	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	1
12	7919412	A->G	-	ENSG00000059804	SLC2A3	protein_coding	three_prime_utr	.	.	Alu	1
12	8053571	A->G	+	ENSG00000065970	FOXJ2	protein_coding	three_prime_utr	.	.	Alu	0.434783
12	9696287	A->G	+	ENSG00000069493	CLEC2D	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	9752880	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	0.99422
12	9753471	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
16	9104364	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	9104365	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.032967
16	9106108	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0930233
16	9108386	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	1572921	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	1572928	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.375
17	1572951	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	1573000	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	1573051	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.625
17	1573081	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.411765
17	1573093	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	1573633	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
17	1573890	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.35
17	1573891	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	1573893	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.35
17	1781148	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.2
17	3608999	A->G	-	ENSG00000196689	TRPV1	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	5026535	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.2
17	5026543	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	5026568	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	5213590	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.2
17	5213603	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	5213604	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	5213724	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.5
17	5213735	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.2
17	5213736	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.3
17	5213853	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.615385
17	5214367	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.4
19	1799213	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	2071935	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0243902
19	2072006	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0294118
19	4653086	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4653884	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	7084562	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.1
19	7084567	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	7084627	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	7084633	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	7085386	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7085399	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.25
19	7086054	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	7086072	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	8540447	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	8540453	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.3
19	9562795	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	9562975	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	9562996	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	9563698	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	9650910	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9650915	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3108730	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.2
20	3867448	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
20	3869636	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869834	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0487805
20	3869865	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	3873372	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.09375
20	3873380	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	3875232	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3875273	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	5195158	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.409091
20	5997782	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	5997812	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10380585	A->G	+	ENSG00000054523	KIF1B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10380626	A->G	+	ENSG00000054523	KIF1B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10457621	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10458044	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0983607
1	10458213	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	10458717	A->G	-	ENSG00000203469	AL354956.1	antisense	three_prime_utr	.	.	Alu	0.115385
1	10460001	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19215848	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.0714286
1	19216128	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.0571429
1	19216886	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.105263
1	19217503	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.157895
1	19217508	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.0952381
1	19217515	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.1
1	19258972	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0821918
1	19259532	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0273973
1	19329189	A->G	+	ENSG00000040487	PQLC2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	24537621	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	24537878	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	24538698	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	26878727	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	26878733	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	26879099	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	26879111	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.15
1	28499415	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28715872	A->G	+	ENSG00000162419	GMEB1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28715882	A->G	+	ENSG00000162419	GMEB1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32621157	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	32682610	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	32683665	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	35602555	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	36063818	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	36063848	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	36063861	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	36063878	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36063888	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	36066306	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36067455	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	36067476	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.125
1	36067560	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36067564	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	36068423	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.4
1	36068432	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36068436	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.3
1	36069273	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36069801	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.4
1	36069802	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	36069892	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	36069897	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37860927	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.103448
1	37860994	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.0645161
1	37861431	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.0784314
1	37861482	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.037037
1	45510334	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.15
1	52350883	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	52350910	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52350919	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	52373050	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	52823204	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	52823222	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52824026	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	52824039	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52824078	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	52824180	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	52824188	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	52824221	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	52824226	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	52824385	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52824391	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	52824518	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.264706
1	52824545	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	52824627	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	54027548	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.2
1	54030492	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	54030539	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	54031151	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	85653636	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	89182717	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	90032190	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	92509607	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	92509610	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.138889
1	92509623	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	92509632	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	92509646	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	92511437	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	92511438	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	92513061	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0652174
1	92513085	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.05
1	93366957	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	20251058	A->G	-	ENSG00000055917	PUM2	protein_coding	three_prime_utr	.	.	Alu	0.186441
2	20618570	A->G	-	ENSG00000118960	HS1BP3	protein_coding	three_prime_utr	.	.	Alu	0.0694444
2	24000294	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	24001252	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	24003069	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	32309223	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32309326	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.724138
2	32309345	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32310218	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310232	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	32310310	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37100446	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37100447	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	37100471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0851064
2	37100472	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
2	37100519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.85
2	37100523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.6
2	37100527	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37100559	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.8
2	37100865	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.12
2	37100869	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37100870	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.534884
2	37100873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.139535
2	37100884	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	37100932	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.380952
2	37100939	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.578947
2	37100944	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.189189
2	37100954	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.361702
2	37100986	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.109091
2	37101248	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0930233
2	37101540	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37101621	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.134831
2	37101657	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.149254
2	37102214	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.617647
2	37102241	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37103378	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37103391	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	37103399	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	37104093	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	37104096	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	37104132	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37104134	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37104585	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	37104610	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
2	37104786	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.516129
2	37104790	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.242424
2	37104873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.12963
2	37104881	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.306122
2	37104882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0612245
2	37104888	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37104899	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37202483	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.171429
2	37202484	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.305556
2	37202485	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37202486	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	37202489	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	60900706	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	61050142	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	61050190	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.25
2	69459441	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
2	69459543	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
2	69461622	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.35
2	69461623	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	69461717	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	69461724	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	69461769	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	69461770	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	69461771	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	69461774	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	69461859	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	69462567	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	69462570	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	69462579	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	69462619	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	69462638	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.45
2	69462674	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	69463445	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	69463581	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	69463636	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	69463676	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	69463690	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	69463778	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	69463790	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	85549633	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.15
2	85549634	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.1
2	85549642	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	86137582	A->G	+	ENSG00000132300	PTCD3	protein_coding	three_prime_utr	.	.	Alu	0.485714
2	96249368	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.5
2	96249500	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	96249514	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.173077
2	96249536	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	96249537	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	96249541	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	96249575	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.209302
2	96249578	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.113636
2	96251346	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.030303
2	96251468	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0266667
2	99195832	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0338983
3	10101622	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
3	10101635	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	10150949	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0253165
3	10151140	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	10151674	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.152381
3	15072187	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	23921784	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	23921837	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.15
3	23921894	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	23921968	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.2
3	23922067	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	40533321	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	44359153	A->G	+	ENSG00000179152	TCAIM	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	44749356	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	44749570	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	44750020	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	45680688	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.375
3	45680692	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.304348
3	45680693	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.166667
3	45680796	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.181818
3	45680855	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.0909091
3	48749658	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	48749681	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0483871
3	48749744	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0784314
3	48749775	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0289855
3	48750055	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	48750196	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0819672
3	48750244	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0235294
3	48750474	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.025641
3	49359890	A->G	-	ENSG00000067560	RHOA	protein_coding	three_prime_utr	.	.	Alu	0.287183
3	57563249	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	57565250	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	57626544	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.2
3	57626597	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.08
4	15850188	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.025641
4	17627044	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	17801914	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.809524
4	17801930	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	17801955	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	39548177	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0714286
4	39548837	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0952381
4	39549032	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.125
4	39549073	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0714286
4	39549119	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0869565
4	39549137	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0625
4	39549147	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0740741
4	39549157	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.130435
4	39549161	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.130435
4	39549192	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.25
4	39549350	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.157895
4	39549357	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.1
4	39549411	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.121212
4	39549446	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0810811
4	39549449	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.162162
4	39549450	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0540541
4	39549467	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0666667
4	39549490	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.16129
4	39549501	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0769231
4	39549546	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.166667
4	39549547	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.421053
4	39549563	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
4	39550356	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
4	39550402	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.05
4	39550442	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0588235
4	39551034	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0740741
4	39551090	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0526316
4	39551114	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.133333
4	39551115	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0689655
4	39551138	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0606061
4	39551192	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.136364
4	73057039	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0606061
4	73057170	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0833333
4	73057270	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	73057778	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.04
4	75917603	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0243902
4	75917698	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0357143
4	77718349	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0707965
4	77718350	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0884956
4	77718351	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0789474
4	77719085	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.125
4	79904532	A->G	-	ENSG00000163297	ANTXR2	protein_coding	three_prime_utr	.	.	Alu	0.1
4	83294091	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	83294102	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	83294126	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	83294141	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	83294326	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.538462
4	83294351	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	83294528	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	83294644	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.2
4	83294676	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0967742
4	83294698	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.148148
4	83294727	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	83294810	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.411765
4	83294811	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	83294820	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.4375
4	83294837	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	83294876	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	83294884	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	1
4	83294914	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.5625
4	99869768	A->G	+	ENSG00000070190	DAPP1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
5	32229383	A->G	-	ENSG00000150712	MTMR12	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	37290286	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	37290882	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	37291318	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	65667723	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.1
5	65668353	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668365	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.233333
5	65668366	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0666667
5	65668392	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.08
5	65668418	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	65668575	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.125
5	65668617	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668839	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	65668856	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	65668861	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668875	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.866667
5	65668891	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.869565
5	65668903	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	69282317	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	69282344	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.7
5	69282345	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	75377926	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.3
5	78778906	A->G	-	ENSG00000113273	ARSB	protein_coding	three_prime_utr	.	.	Alu	0.0350877
5	78779003	A->G	-	ENSG00000113273	ARSB	protein_coding	three_prime_utr	.	.	Alu	0.0754717
5	80627582	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	80876374	A->G	+	ENSG00000113318	MSH3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	96774786	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.092437
5	96774840	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.401235
6	13288416	A->G	+	ENSG00000215022	AL008729.1	antisense	three_prime_utr	.	.	Alu	1
6	13788115	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	13790699	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	18128983	A->G	-	ENSG00000137364	TPMT	protein_coding	three_prime_utr	.	.	Alu	0.0810811
6	24806066	A->G	-	ENSG00000282804	AL512428.1	protein_coding	three_prime_utr	.	.	Alu	0.0217391
6	25984779	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	26094800	A->G	+	ENSG00000010704	HFE	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	33005832	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	33300539	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.020979
6	34283437	A->G	-	ENSG00000225339	AL354740.1	processed_transcript	three_prime_utr	.	.	Alu	0.04
6	36490416	A->G	+	ENSG00000112078	KCTD20	protein_coding	three_prime_utr	.	.	Alu	0.0298507
6	37028646	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	37028735	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0224719
6	37028774	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0238095
6	37028844	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0318182
6	42077807	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	42077825	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.277778
6	42077857	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	42077990	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0967742
6	42077991	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42078016	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42078043	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42078151	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0408163
6	42078152	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0816327
6	42078844	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.4
6	42079667	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42080550	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42887387	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0326087
6	42887528	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42888592	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42889255	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
6	42889396	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0227273
6	43615535	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	53003289	A->G	-	ENSG00000112144	ICK	protein_coding	three_prime_utr	.	.	Alu	0.25
6	53497953	A->G	-	ENSG00000001084	GCLC	protein_coding	three_prime_utr	.	.	Alu	0.529412
6	57108037	A->G	+	ENSG00000112200	ZNF451	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	70589021	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.125
6	70589070	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	73424191	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	73424372	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.1
6	73425032	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0967742
6	73425042	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	73425146	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	73516437	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0258621
6	89634589	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
6	89634684	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	89636970	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	98873605	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	98873694	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	98873724	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.15
7	17344674	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0325581
7	17344710	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0584958
7	17344829	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0253165
7	17344850	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0224215
7	17345053	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	17345078	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.025641
7	17345116	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0229358
7	17345159	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0273224
7	21901493	A->G	-	ENSG00000164649	CDCA7L	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	21901506	A->G	-	ENSG00000164649	CDCA7L	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	22941787	A->G	-	ENSG00000122591	FAM126A	protein_coding	three_prime_utr	.	.	Alu	0.538462
7	25121037	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	25121116	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.416667
7	25121672	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.2
7	38723495	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.107143
7	38723682	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.2
7	38724609	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0425532
7	38724621	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.108696
7	38724622	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0425532
7	38724666	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0731707
7	38724709	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	38724838	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	44578815	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0210526
7	44801788	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.148649
7	44801836	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0340136
7	44802349	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0266667
7	44802500	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.318182
7	44829489	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0285714
7	44880358	A->G	-	ENSG00000146676	PURB	protein_coding	three_prime_utr	.	.	Alu	0.0857143
7	48103965	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	56080511	A->G	+	ENSG00000129103	SUMF2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	66153209	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0273973
7	66153559	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	66154345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0357143
7	66154351	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0344828
8	11842717	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.025
8	11843077	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.160377
8	11843119	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0285714
8	11843865	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0576923
8	11843900	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	16107950	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	16107961	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	16107962	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.15873
8	16107989	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.557692
8	16107990	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.127273
8	16108046	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	16108394	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.291667
8	16108519	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.0519481
8	23191469	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
8	23191518	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.1
8	23430958	A->G	-	ENSG00000197217	ENTPD4	protein_coding	three_prime_utr	.	.	Alu	0.4
8	29063918	A->G	+	ENSG00000147421	HMBOX1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	30679087	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0333333
8	38970704	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.04
8	38971896	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.031746
8	38972210	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0952381
8	38972291	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0210526
8	38972342	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0481928
8	38972955	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.031746
8	38972969	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0461538
8	38973065	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
8	38973079	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0428571
8	41542495	A->G	+	ENSG00000253174	AC009630.2	antisense	three_prime_utr	.	.	Alu	0.117647
8	43020508	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	43020544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	43020554	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43020567	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	43021408	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	43021512	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	43021876	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.8
8	43021921	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.296296
8	43023579	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	43023592	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	43023640	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43023646	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43023670	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	43023683	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43023695	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43023723	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	43026955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	43026961	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43026966	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	43027004	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	43027009	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.148148
8	43027076	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43027144	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
8	43028233	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.04
8	43028273	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	43028274	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43028279	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	43029192	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
8	43029316	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0447761
8	43123157	A->G	+	ENSG00000185900	POMK	protein_coding	three_prime_utr	.	.	Alu	0.0327869
8	51817881	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	0.486486
8	51818304	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	1
8	55825096	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	56012388	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.375
8	56013436	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.5
8	56013437	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	97726887	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0217391
8	97726897	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0222222
8	97726902	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0210526
8	97727026	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.04
8	97728715	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.037037
9	19373163	A->G	+	ENSG00000137145	DENND4C	protein_coding	three_prime_utr	.	.	Alu	0.285714
9	32456382	A->G	-	ENSG00000107201	DDX58	protein_coding	three_prime_utr	.	.	Alu	0.6
9	36216029	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	36216944	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	71972982	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	78271830	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.15
9	78271967	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.8
9	78271969	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	78271970	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	78272035	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.461538
9	78272047	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.583333
9	78272057	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	83245787	A->G	-	ENSG00000172159	FRMD3	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	93448410	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.0285714
9	96894970	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	97672966	A->G	+	ENSG00000136937	NCBP1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
9	98084780	A->G	-	ENSG00000106785	TRIM14	protein_coding	three_prime_utr	.	.	Alu	0.056338
9	98084798	A->G	-	ENSG00000106785	TRIM14	protein_coding	three_prime_utr	.	.	Alu	0.0322581
9	98084807	A->G	-	ENSG00000106785	TRIM14	protein_coding	three_prime_utr	.	.	Alu	0.04
9	98084808	A->G	-	ENSG00000106785	TRIM14	protein_coding	three_prime_utr	.	.	Alu	0.027027
9	98085403	A->G	-	ENSG00000106785	TRIM14	protein_coding	three_prime_utr	.	.	Alu	0.146552
10	11565452	A->G	-	ENSG00000148429	USP6NL	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	16591036	A->G	-	ENSG00000148484	RSU1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	17798464	A->G	+	ENSG00000148483	TMEM236	protein_coding	three_prime_utr	.	.	Alu	0.272727
10	17800618	A->G	+	ENSG00000148483	TMEM236	protein_coding	three_prime_utr	.	.	Alu	0.615385
10	17800734	A->G	+	ENSG00000148483	TMEM236	protein_coding	three_prime_utr	.	.	Alu	1
10	20284284	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
10	20284286	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.416667
10	20284290	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.125
10	20284468	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.195652
10	20284492	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0958904
10	20284500	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0470588
10	20284509	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0824742
10	20284521	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.205607
10	20284534	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0380952
10	20284544	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.040404
10	20284568	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.198198
10	20284569	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0442478
10	20286850	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.025974
10	20286924	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
10	27110964	A->G	-	ENSG00000136758	YME1L1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	27111153	A->G	-	ENSG00000136758	YME1L1	protein_coding	three_prime_utr	.	.	Alu	0.0273973
10	30310836	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.125
10	30310842	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.2
10	30311904	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	49973511	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.125
10	58397939	A->G	+	ENSG00000108064	TFAM	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	68479561	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.363636
10	71365079	A->G	+	ENSG00000279406	AL359183.1	TEC	three_prime_utr	.	.	Alu	0.2
10	72234242	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	72234251	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	72234347	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0487805
10	72234399	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0243902
10	72234400	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0240964
10	72234412	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0375
10	72235001	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0491803
10	72235159	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	73249848	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.027027
10	80522233	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.0333333
10	94610864	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.117647
10	94612716	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	94612761	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	99713845	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.056338
10	99713935	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0333333
11	32853783	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	32854300	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.125
11	32854478	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	32854529	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	32856935	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	32857252	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.1
11	32857281	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	35232096	A->G	+	ENSG00000026508	CD44	protein_coding	three_prime_utr	.	.	Alu	0.477366
11	61801948	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
11	61963414	A->G	-	ENSG00000167995	BEST1	protein_coding	three_prime_utr	.	.	Alu	0.409091
11	62751197	A->G	-	ENSG00000185670	ZBTB3	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	62830385	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.2
11	62830471	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	62830485	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	65775999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
11	65776028	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	65776697	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0847458
11	65776883	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0353982
11	65777038	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0610687
11	66520806	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	66524168	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	66524197	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.125
11	66524198	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.125
11	66524204	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.125
11	68755946	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
11	72286739	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.5
11	72288222	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.1
11	72288270	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.3
11	72288284	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72289117	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.538462
11	72289126	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	72289131	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	72290692	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
11	72290700	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72290752	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	72290778	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.176471
11	72291879	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	74455758	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0909091
11	74455860	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0576923
11	74455888	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0327869
11	74455892	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0294118
11	74455946	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.136986
11	74455955	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.12
11	74455960	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.114286
11	74455978	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0517241
11	74456050	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0285714
11	74456098	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0857143
11	74456208	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.157895
11	74456220	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.190476
11	74456232	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.12
11	74456242	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.137931
11	74456263	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.12
11	74456285	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.2
11	74456286	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.133333
11	77021371	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.0535714
11	94415949	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	94416580	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	94416589	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	94416601	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	94416611	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	1
11	94416616	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	94416998	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	94417004	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.25
11	94417005	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	94417288	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.25
11	94548444	A->G	+	ENSG00000196371	FUT4	protein_coding	three_prime_utr	.	.	Alu	0.0294118
12	14498895	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.2
12	14498911	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	14498926	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	24816887	A->G	-	ENSG00000060982	BCAT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	27421384	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.35
12	27421494	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	27421500	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	27423505	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	27423514	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.7
12	27423590	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	27423591	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	27423609	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	42233572	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	42233692	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	42233716	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	42233740	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	42233794	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233802	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	42233926	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.15
12	42233988	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.5
12	42234791	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	42234912	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	42234981	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	43788723	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	43788726	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50931644	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0483871
12	51921503	A->G	+	ENSG00000139567	ACVRL1	protein_coding	three_prime_utr	.	.	Alu	0.238095
12	53296509	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.03125
12	53296550	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.0853659
12	54235425	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.129032
12	54238108	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	54240494	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	55821662	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	55821778	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.3
12	55821801	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.3
12	56229497	A->G	+	ENSG00000139579	NABP2	protein_coding	three_prime_utr	.	.	Alu	0.0273973
12	59783729	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	59783745	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	59783751	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.321429
12	59783752	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.517241
12	59783804	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	59784300	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	62335860	A->G	+	ENSG00000135655	USP15	protein_coding	three_prime_utr	.	.	Alu	0.0784314
12	64448998	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	64449015	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0731707
12	64449023	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0810811
12	66137369	A->G	-	ENSG00000228144	AC078927.1	protein_coding	three_prime_utr	.	.	Alu	1
12	66251150	A->G	+	ENSG00000284011	MIR6502	miRNA	three_prime_utr	.	.	Alu	0.0529101
12	68765184	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	68766248	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	68766366	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.375
12	68842765	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.0529412
12	68843224	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.300546
12	68843233	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.239796
12	68843234	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.0904255
12	68843263	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.272251
12	68843273	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	68843276	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.087963
12	68843277	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0616114
12	68843293	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	68843726	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0654206
12	68843729	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0873786
12	68843730	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.103093
12	68843746	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0825688
12	68843749	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.233333
12	68843772	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.159236
12	68843778	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.107784
12	68855768	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0612245
12	68855772	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0888889
12	68855863	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	71702353	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	71702788	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.0967742
12	71702890	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.3
12	71702892	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	71791170	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	71791201	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	93503484	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	93504240	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.2
12	93504241	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.3
12	93504258	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.3
12	93504271	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	93504375	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	93504376	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.5625
12	93504383	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	93506539	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	93508380	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	98548912	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0967742
12	98604593	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98604777	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.125
12	98604784	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	98604787	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.35
12	98604836	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98604855	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98604874	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.4
12	98605164	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.4
12	98605165	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.5
12	98605178	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.6
12	98605210	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	98605561	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98605585	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98605705	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98605709	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	98605961	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98733673	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	98733686	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.030303
12	98733696	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.180328
12	98734993	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.4
12	98735014	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.3
12	98735015	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	21374301	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0357143
13	21374467	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.02
13	21374961	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0206897
13	21375108	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0316456
13	25340838	A->G	+	ENSG00000139496	NUP58	protein_coding	three_prime_utr	.	.	Alu	0.0357143
13	27066330	A->G	-	ENSG00000152484	USP12	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	32399045	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	41257698	A->G	-	ENSG00000120662	MTRF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	45030382	A->G	+	ENSG00000223732	AL359706.1	lincRNA	three_prime_utr	.	.	Alu	0.272727
13	45030644	A->G	+	ENSG00000223732	AL359706.1	lincRNA	three_prime_utr	.	.	Alu	0.2
13	45334095	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	45334096	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	48046659	A->G	+	ENSG00000136159	NUDT15	protein_coding	three_prime_utr	.	.	Alu	0.0229885
13	52689700	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
13	52689770	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	52689793	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
13	52689807	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	52689808	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	52689809	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	52689832	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	52689848	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
13	52689865	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	52689891	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	52689919	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.214286
13	52691083	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
13	52691128	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	52691192	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	52692576	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	52694709	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.3
13	52694896	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	20366201	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	20366224	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	20366229	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	20366334	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.16
14	20366800	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
14	20366891	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	20366898	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.7
14	20366901	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.578947
14	20366933	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.346154
14	20366937	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	20366980	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.409091
14	20367007	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	20367008	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	20367019	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	20367107	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.642857
14	20367119	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.916667
14	20367129	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.933333
14	20367161	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	20367881	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.375
14	20367882	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.588235
14	21460331	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.235294
14	21460342	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.352941
14	21460499	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460706	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	21460840	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.4
14	22877684	A->G	+	ENSG00000197324	LRP10	protein_coding	three_prime_utr	.	.	Alu	0.0522088
14	22898671	A->G	-	ENSG00000100461	RBM23	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31093550	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31093551	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31094032	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	31094036	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.454545
14	31094132	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	31094133	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	31094148	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	31094345	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	31094385	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31094390	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	31094398	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	31094687	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	31094707	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31095165	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	31095173	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	31095444	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	35274457	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.9
14	35274462	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.3
14	35274469	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.818182
14	50245939	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50245959	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50245999	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.1
14	50326877	A->G	+	ENSG00000259071	AL359397.2	lincRNA	three_prime_utr	.	.	Alu	0.0571429
14	50327545	A->G	+	ENSG00000259071	AL359397.2	lincRNA	three_prime_utr	.	.	Alu	0.0909091
14	52643014	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.5
14	52643092	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.155556
14	52643105	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.193878
14	52776579	A->G	-	ENSG00000259049	AL139317.3	antisense	three_prime_utr	.	.	Alu	0.0526316
14	55368247	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.125
14	64934228	A->G	+	ENSG00000258289	CHURC1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
14	67385350	A->G	+	ENSG00000134001	EIF2S1	protein_coding	three_prime_utr	.	.	Alu	0.05
14	73965557	A->G	-	ENSG00000187097	ENTPD5	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74058163	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
14	74058828	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.047619
14	74200121	A->G	+	ENSG00000205659	LIN52	protein_coding	three_prime_utr	.	.	Alu	1
14	76205204	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	76205243	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	76207065	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.3
14	77337474	A->G	-	ENSG00000100580	TMED8	protein_coding	three_prime_utr	.	.	Alu	0.0363636
14	88013164	A->G	+	ENSG00000140030	GPR65	protein_coding	three_prime_utr	.	.	Alu	0.2
14	88013286	A->G	+	ENSG00000140030	GPR65	protein_coding	three_prime_utr	.	.	Alu	0.2
14	89160384	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.0687023
14	89160423	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.103093
14	92163910	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
15	22867045	A->G	+	ENSG00000140157	NIPA2	protein_coding	three_prime_utr	.	.	Alu	0.477876
15	32605311	A->G	+	ENSG00000262728	AC123768.3	antisense	three_prime_utr	.	.	Alu	0.206897
15	32638235	A->G	+	ENSG00000198826	ARHGAP11A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	32638255	A->G	+	ENSG00000198826	ARHGAP11A	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	34231275	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	34231361	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34231679	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	40035455	A->G	+	ENSG00000128829	EIF2AK4	protein_coding	three_prime_utr	.	.	Alu	0.0512821
15	40662427	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
15	40662758	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	40662761	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	40662797	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	40662866	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.1
15	40662904	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.904762
15	40662905	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	40662940	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	40662942	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	40662947	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	40663241	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	40663247	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.421053
15	40663258	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.375
15	40663266	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.789474
15	41900147	A->G	-	ENSG00000103966	EHD4	protein_coding	three_prime_utr	.	.	Alu	0.114286
15	42531590	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.115385
15	42543332	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0512821
15	42543340	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	42567590	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0833333
15	42568003	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0588235
15	49126659	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.056338
15	49126927	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.162791
15	49127249	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.162162
15	50703085	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	50703097	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	50703158	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	50703163	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.115385
15	50705098	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	50705108	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	50705124	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	50705201	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	50705259	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	50705280	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	50705299	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	51912242	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51912266	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51912272	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	51912300	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51912312	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	51912316	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.666667
15	51913029	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	51913043	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.461538
15	51913048	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	51913197	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51913233	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51913234	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	51913736	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0384615
15	51913793	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	51913837	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	51913968	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	51914240	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	51914299	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	51914941	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51914953	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.3
15	51914954	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	51914968	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	51914973	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.384615
15	60422244	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	60422248	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	60422261	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.2
15	60422704	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.25
15	64140837	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	64365301	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0857143
15	65149399	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	65149437	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.2
15	65149688	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	65149797	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	69271422	A->G	+	ENSG00000138604	GLCE	protein_coding	three_prime_utr	.	.	Alu	0.269231
15	83005551	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	84641973	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.214286
15	84641974	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.571429
15	84642539	A->G	-	ENSG00000277578	RF00017	misc_RNA	three_prime_utr	.	.	Alu	0.181818
15	84642543	A->G	-	ENSG00000277578	RF00017	misc_RNA	three_prime_utr	.	.	Alu	0.181818
15	84642631	A->G	-	ENSG00000277578	RF00017	misc_RNA	three_prime_utr	.	.	Alu	0.111111
15	89196117	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.135135
15	89834717	A->G	-	ENSG00000157823	AP3S2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
15	90276841	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276850	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276851	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276863	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90277109	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	10924455	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	10926732	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.125
16	10928368	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	11835278	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	12660868	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.135135
16	12660869	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	12660921	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	12660925	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.25
16	12661093	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	12663334	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0897436
16	14668749	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	14668793	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.1
16	15409221	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	15700333	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0379747
16	15700359	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0246914
16	15700467	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	18784392	A->G	-	ENSG00000134419	RPS15A	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	19120207	A->G	+	ENSG00000205730	ITPRIPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	19120221	A->G	+	ENSG00000205730	ITPRIPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	19120227	A->G	+	ENSG00000205730	ITPRIPL2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	21640015	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.238095
16	21640172	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0615385
16	21640485	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0340909
16	21640494	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.234973
16	21640506	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.523179
16	21640507	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.231788
16	21640546	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.039604
16	21640547	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	21640559	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0298507
16	21640568	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.411765
16	21640645	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	1
16	21640658	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.375
16	21640704	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.097561
16	21640707	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.575
16	21640710	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.179487
16	21640720	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.441176
16	21640721	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	21641223	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0507246
16	22285620	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	22285916	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	22288459	A->G	+	ENSG00000261113	AC009034.1	antisense	three_prime_utr	.	.	Alu	0.285714
16	23465205	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	23465841	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	23465884	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
16	28965853	A->G	+	ENSG00000260853	AC109460.2	antisense	three_prime_utr	.	.	Alu	0.0465116
16	29667589	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	29667592	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0306122
16	29667803	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0309278
16	29668041	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0903614
16	29668111	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.212766
16	29668184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0748663
16	29668294	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03
16	29668591	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29668765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0797872
16	29669232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29669591	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0677966
16	29669895	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.265306
16	31358411	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.416667
16	48352500	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.1
16	48352531	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	48354251	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	48354269	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.714286
16	48354287	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	48354308	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	48354312	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	48354392	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	48354398	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.208333
16	48354406	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	50673058	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	50673146	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	50673221	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.025974
16	50673251	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	50673255	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	69323469	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.3
16	69327852	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	69356611	A->G	-	ENSG00000132604	TERF2	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	69701218	A->G	+	ENSG00000102908	NFAT5	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	69702644	A->G	+	ENSG00000102908	NFAT5	protein_coding	three_prime_utr	.	.	Alu	0.0652174
16	70248664	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	70249182	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	70376772	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.3
16	70376808	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70377345	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70377417	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70573396	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.1
16	74299646	A->G	+	ENSG00000103035	PSMD7	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	74448644	A->G	-	ENSG00000090863	GLG1	protein_coding	three_prime_utr	.	.	Alu	0.1
16	74450796	A->G	-	ENSG00000090863	GLG1	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	80980773	A->G	-	ENSG00000103121	CMC2	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	80980779	A->G	-	ENSG00000103121	CMC2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	87403158	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	three_prime_utr	.	.	Alu	0.995951
17	20314506	A->G	+	ENSG00000128487	SPECC1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	27312914	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.027027
17	27314469	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	27314531	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	29551048	A->G	+	ENSG00000160551	TAOK1	protein_coding	three_prime_utr	.	.	Alu	0.0603448
17	30958636	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0232558
17	30958639	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0235294
17	30958665	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0224719
17	30958692	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.08
17	30958708	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0795455
17	30958768	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
17	30958809	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
17	30958828	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.05
17	32372657	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.0612245
17	32373457	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.2
17	35010708	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0465116
17	35098585	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	37614042	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	37614071	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0576923
17	37614098	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	39255073	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.16
17	39255801	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	39256064	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39256095	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	39256124	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39256238	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	39256239	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39256264	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39763883	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39763916	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.5
17	39763951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	39763952	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.923077
17	39763965	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	39764008	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	39764024	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39764032	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	39764049	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	39764299	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.4
17	39764369	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.3
17	43218118	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	43218119	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0967742
17	43218160	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
17	43218496	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	43218511	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	48864141	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	48864164	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	48864261	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	49295202	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49295203	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49296739	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	49296740	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.210526
17	50964371	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.25
17	50964655	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	57972463	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.472222
17	57972464	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.216216
17	57972468	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.525
17	59203700	A->G	+	ENSG00000265415	AC099850.3	antisense	three_prime_utr	.	.	Alu	0.0555556
17	62449449	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	62449564	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	62449828	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	62449854	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	62449983	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	62450639	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	62450673	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	62450705	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64321513	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
17	64321540	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64321678	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	64321679	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	64322223	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.466667
17	64322237	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	64322238	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.6
17	64322274	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64322303	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.304348
17	64322323	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	64322329	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	64322340	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	64467764	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	64467779	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	64467788	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	64468320	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
17	64468469	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0430108
17	64468472	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0735294
17	64468551	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
17	64468565	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0272727
17	75890120	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0652174
17	75943058	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
17	75943979	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.04
17	75944014	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0833333
17	75944196	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0392157
17	75944230	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0465116
17	75944359	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.206897
17	75944919	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.142857
17	75944995	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.25
18	21631643	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.277778
18	21631703	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	21631754	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.190476
18	21632222	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.2
18	21632251	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
18	21632300	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
18	21632307	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	23297277	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070318	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0625
18	32070761	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	32071214	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32071301	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32071913	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.12
18	50393230	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.075
18	58751183	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	58751189	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.4
18	58752185	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.2
18	58752517	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.4
18	58752739	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.25
19	11449568	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.021978
19	11450568	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	11450572	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	12078361	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12079386	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12079396	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.4
19	12080807	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12080990	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12875477	A->G	-	ENSG00000105612	DNASE2	protein_coding	three_prime_utr	.	.	Alu	0.025974
19	14734609	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	14734621	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.039604
19	14734677	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.09375
19	14735314	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0362319
19	14735362	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0229885
19	16550468	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	17826173	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0265487
19	17826309	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	17826383	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0350877
19	18070688	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.25641
19	18071156	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	18364534	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	18364579	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	18365366	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	18365543	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	18365578	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	18365604	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
19	18366476	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	18366628	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	18366637	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18366705	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18366731	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366733	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	18367013	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	18367045	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18575663	A->G	+	ENSG00000221983	UBA52	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	19680361	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	19680762	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	19680764	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	19681495	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.5
19	19681496	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19681526	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	19681579	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.125
19	19681592	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.125
19	19681635	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.125
19	19682268	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19682345	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.25
19	19682359	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	19682482	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19682483	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	19682884	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	19682894	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19682900	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19683079	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	19792366	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.3
19	21119150	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	21120095	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21184190	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	21184192	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	21291623	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.3
19	34470168	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	38331164	A->G	+	ENSG00000099337	KCNK6	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	38868196	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	38868218	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	38868389	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0704225
19	38868422	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0344828
19	38868467	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0333333
19	38868517	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	38868564	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	38869033	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	39492073	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	44662440	A->G	+	ENSG00000073008	PVR	protein_coding	three_prime_utr	.	.	Alu	0.097561
19	44662491	A->G	+	ENSG00000073008	PVR	protein_coding	three_prime_utr	.	.	Alu	0.0289855
19	45549578	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45549731	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	45551058	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	45703743	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	49521728	A->G	+	ENSG00000104870	FCGRT	protein_coding	three_prime_utr	.	.	Alu	0.2
19	49949038	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	49949585	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	49949597	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.842105
19	49949598	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.25
19	49949670	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	49949676	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.25
19	49949679	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	49949685	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	49949687	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	1
19	49949730	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	49949766	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.6
19	49949790	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.75
19	49949795	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.25
19	49949811	A->G	-	ENSG00000161640	SIGLEC11	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	51642766	A->G	-	ENSG00000254415	SIGLEC14	protein_coding	three_prime_utr	.	.	Alu	0.0333333
19	52556182	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	52556375	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	52556401	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	54237106	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.0517241
19	54237118	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.177419
19	54237120	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.03125
19	54237180	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.267857
19	54237183	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.0566038
19	54588730	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.3
19	54588940	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	54589396	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	54589428	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	55661834	A->G	+	ENSG00000063244	U2AF2	protein_coding	three_prime_utr	.	.	Alu	1
19	57214430	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57807445	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57845163	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57845172	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	57845792	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57860381	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57860469	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57860673	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	57860680	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	57860701	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	57860997	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57861400	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	57861448	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	57861817	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.189189
19	57861823	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	57861834	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	57861847	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	57862035	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57862048	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57863275	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57863789	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57863790	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57863992	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57864334	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57864339	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57864406	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57907086	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	57907087	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	57908296	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57908309	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58126887	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	58127268	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	58127284	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	58127338	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	18487769	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	18488337	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	25447708	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
20	25448065	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.115385
20	32238285	A->G	+	ENSG00000101346	POFUT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	36652296	A->G	-	ENSG00000101079	NDRG3	protein_coding	three_prime_utr	.	.	Alu	0.0350877
20	36890597	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.031746
20	36890603	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.028169
20	36891820	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.05
20	36892532	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.0263158
20	36892574	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	36892589	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.04
20	45077483	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.021164
20	45077484	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.032967
20	45078404	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0215054
20	45078465	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0204082
20	45079055	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0204082
20	45079063	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0306122
20	45079064	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0421053
20	45079094	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.025641
20	49504572	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	49504585	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.0465116
20	49504935	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.461538
20	49504938	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	49504943	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.352941
20	49504974	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	49504975	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	49504999	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.12
20	49505001	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.24
20	49505066	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.285714
20	49505092	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	49506454	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.0638298
20	49506493	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.047619
20	49506515	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	49506516	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	49506582	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	49506645	A->G	-	ENSG00000124212	PTGIS	protein_coding	three_prime_utr	.	.	Alu	0.129032
21	33263899	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.181818
21	33264044	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.105263
21	33355754	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
21	33355807	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.136364
21	33355838	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
21	33355905	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	33355909	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.130435
21	33357625	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.230769
21	33357663	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33357710	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.466667
21	33357713	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	33357727	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.352941
21	33357759	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	33357771	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33357789	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33357790	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.444444
21	33357802	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.352941
21	33358727	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
21	33358743	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
21	33358766	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
21	33358767	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
21	42909259	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	42909376	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
21	42909403	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
21	42909416	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.129032
21	42909425	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
21	42909743	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.5
21	42909744	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	42909760	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.5
21	42909779	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	42909780	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	42909825	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.2
21	42909850	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	42909861	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42909867	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42909887	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42909937	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.375
21	42909947	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.12
21	42909948	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.192308
21	42910070	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	42910071	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.733333
21	42910143	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.7
21	42911009	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.2
21	42911665	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	42911666	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.266667
21	42912076	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	42912093	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	17110419	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0277778
22	17110551	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0215827
22	17110627	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.027027
22	17110680	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0268199
22	17110747	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0371901
22	17110759	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0268199
22	17113215	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.327434
22	17113216	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.13913
22	17113247	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.447059
22	17113249	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0449438
22	17113258	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0705882
22	17113261	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.227848
22	17113268	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.228916
22	17113273	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0631579
22	17113311	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0568182
22	17113342	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0375
22	17113358	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0224719
22	17113380	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.7
22	17113382	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0322581
22	17113383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.484848
22	17113384	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0784314
22	17113431	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0541872
22	17113432	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.108911
22	17113436	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0444444
22	17113471	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0727273
22	17113480	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0353982
22	17702529	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.25
22	18088524	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	18096006	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	18096058	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	18096084	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18097815	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18097823	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.368421
22	18097824	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	20890546	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0652174
22	20890555	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0377358
22	25724900	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	25724911	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	25724940	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.571429
22	25724961	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	25724973	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	25724978	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	25724994	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.642857
22	25725026	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.263158
22	25725027	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.25
22	25725031	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.15
22	25725099	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.275862
22	25725119	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.263158
22	25725802	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.47619
22	26522814	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26523696	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	26524342	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	26524360	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	26524471	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	26525381	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.125
22	26525382	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	26525417	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	27852609	A->G	-	ENSG00000180957	PITPNB	protein_coding	three_prime_utr	.	.	Alu	0.568182
22	29506428	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.2
22	29506443	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.4
22	29506937	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	29506961	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.2
22	29696160	A->G	+	ENSG00000186575	NF2	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	29696174	A->G	+	ENSG00000186575	NF2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	30662609	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	30662663	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	30662753	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	30662772	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.4
22	35659793	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.870968
22	35659860	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.294118
22	35659866	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.533333
22	35659869	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.4
22	35659891	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	35659932	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.137931
22	35659940	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.108108
22	35659956	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0795455
22	35660002	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0802469
22	35660344	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0916031
22	35660345	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.158333
22	35660362	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.138158
22	35660363	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.358108
22	35660444	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.853659
22	35660445	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.768595
22	35660446	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.120968
22	35660460	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.115385
22	35660499	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.107143
22	35660543	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.2
22	35660551	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.875
22	35660583	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.057971
22	35660618	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	35660685	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.533784
22	35660703	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.130952
22	35661290	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	36266115	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	36266135	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	36266889	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	37888920	A->G	+	ENSG00000100129	EIF3L	protein_coding	three_prime_utr	.	.	Alu	0.125
22	38685021	A->G	+	ENSG00000100216	TOMM22	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	39032998	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.2
22	40927219	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.6
22	40927245	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	40927264	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.25
22	40927272	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	40930670	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	40930699	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.5
22	40930740	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	40931639	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	40931647	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	41599256	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.583333
22	41599288	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.127273
22	41599327	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	41599595	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	41600191	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	41600200	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.2
22	41600324	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	42381099	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.692308
22	42381448	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
22	42381466	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0517241
22	42383533	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.14
22	42383583	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.097561
22	42383631	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.511111
22	42383741	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
22	44170101	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	45193983	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.4
22	45194408	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.453488
22	45194413	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	45194421	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.103448
22	45194478	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	100023962	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	100024063	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.186047
1	108636723	A->G	+	ENSG00000162636	FAM102B	protein_coding	three_prime_utr	.	.	Alu	0.0784314
1	108933013	A->G	-	ENSG00000121940	CLCC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	109594844	A->G	+	ENSG00000065135	GNAI3	protein_coding	three_prime_utr	.	.	Alu	0.1
1	121391909	A->G	+	ENSG00000171943	SRGAP2C	protein_coding	three_prime_utr	.	.	Alu	0.6
1	145925523	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	149555610	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	149555663	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.642857
1	149555673	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.933333
1	149555674	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.857143
1	149555749	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.148148
1	149555762	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.588235
1	149555763	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.842105
1	149555766	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	150731205	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0308642
1	150731344	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.042654
1	150732032	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0234375
1	150732161	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.033839
1	150996149	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150996158	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151119049	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	151119175	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119185	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	151119201	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119285	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	151119304	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151119311	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	151119345	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119353	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151119354	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	151119360	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151119418	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	151119433	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151120288	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151120289	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151120470	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	151120514	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151120712	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	151121677	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	151121681	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	151121698	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	151121699	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.35
1	151121700	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.45
1	151121712	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.1
1	151123182	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	151123231	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	151123985	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151124217	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151124241	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	151124262	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	151124279	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	151124329	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	155883332	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	155883392	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	156722801	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
1	156722802	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	0.0273973
1	160995495	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	160995548	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	160995608	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	160995614	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.375
1	160995644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	160996586	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0227273
1	160996683	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0289855
1	161124830	A->G	+	ENSG00000158796	DEDD	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	161367010	A->G	+	ENSG00000188931	CFAP126	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	161367027	A->G	+	ENSG00000188931	CFAP126	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	168200861	A->G	+	ENSG00000143155	TIPRL	protein_coding	three_prime_utr	.	.	Alu	0.05
1	168244278	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0217391
1	168244282	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0229885
1	168244307	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0240964
1	168244376	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0535714
1	168249419	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.08
1	168249433	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.1
1	168249471	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	168249496	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	168249497	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	168249519	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	168251065	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	168251102	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	168251236	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	168251244	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0298507
1	173932983	A->G	-	ENSG00000135870	RC3H1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	179073347	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	179073377	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.3
1	179073678	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.119403
1	179073770	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.158879
1	179075137	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179355599	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	179355643	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.031746
1	179356728	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.15
1	179356822	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	179356868	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.227273
1	179357143	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.375
1	179357161	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	179357283	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	179357303	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	179357320	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.208333
1	179357332	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	179357342	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	179357364	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	179357475	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	179357679	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	179357684	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	179357712	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	179357747	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	179357815	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	179357916	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.121951
1	184792065	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.025
1	184792173	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.03125
1	184793311	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	184793330	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0289855
1	184793352	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0491803
1	184793494	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	184793554	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	205769605	A->G	-	ENSG00000117280	RAB29	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	205769608	A->G	-	ENSG00000117280	RAB29	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	223109947	A->G	-	ENSG00000187554	TLR5	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	224192839	A->G	+	ENSG00000143753	DEGS1	protein_coding	three_prime_utr	.	.	Alu	0.0230769
2	101271462	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.04
2	101271698	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0617284
2	112531049	A->G	+	ENSG00000114999	TTL	protein_coding	three_prime_utr	.	.	Alu	0.0377358
2	113205203	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	113205229	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	113205230	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	113205242	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	127843887	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	127847461	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0289855
2	127847536	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	128191603	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0229008
2	128191695	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0238095
2	128194167	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	128194385	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	128194528	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.04
2	152654041	A->G	-	ENSG00000196504	PRPF40A	protein_coding	three_prime_utr	.	.	Alu	0.529412
2	159770083	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	159770174	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	171321324	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.2
2	175924750	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.652174
2	175926453	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.282051
2	175926454	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.421053
2	175926455	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.243243
2	189747123	A->G	-	ENSG00000151687	ANKAR	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	190934866	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	196134255	A->G	-	ENSG00000081320	STK17B	protein_coding	three_prime_utr	.	.	Alu	0.0803213
2	200978650	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.454545
2	200978656	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.583333
2	201154231	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	201164032	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	201165370	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	201165437	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	201165472	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	201165481	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.15
2	201165534	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	201165546	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	201167242	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0483871
2	201217939	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	201218142	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	201218403	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	201219041	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	201219249	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	201219252	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	201286880	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.08
2	201286881	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.125
2	201287275	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	201287324	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	202561664	A->G	+	ENSG00000204217	BMPR2	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	202877403	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	202877581	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	202877617	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	202877625	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.5
2	202877628	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202880365	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	202880447	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202880448	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	202880472	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.625
2	202880496	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203297404	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	203297449	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	203297450	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	203297802	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	203297906	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	203298259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	206117072	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206117082	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206117094	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.235294
2	206117468	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.266667
2	206117469	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206117531	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.105263
2	206117532	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.263158
2	206117533	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.736842
2	206117599	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206117602	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206117612	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.230769
2	206117634	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.583333
2	206117668	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206118438	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.3125
2	206118453	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.133333
2	206118460	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.125
2	206118717	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206119036	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.230769
2	206119041	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.307692
2	206119478	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206119562	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206120889	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.230769
2	206120899	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206120901	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206121478	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.1875
2	206121564	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.125
2	206122403	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	206122445	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	206122457	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	206122499	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	206122595	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.194444
2	206122616	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.69697
2	206122986	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	207754527	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	207754574	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.16
2	207754591	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	207754640	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	207754721	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	207754764	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	207754807	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.636364
2	207754861	A->G	+	ENSG00000284079	MIR4775	miRNA	three_prime_utr	.	.	Alu	0.714286
2	207755010	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	207755050	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207755188	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	207755397	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	218574208	A->G	+	ENSG00000144580	CNOT9	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	223757525	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	223757534	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	101823609	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	101823941	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0909091
3	101824379	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.146341
3	101824448	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0645161
3	101824494	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0769231
3	101824499	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0714286
3	101824517	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.2
3	101824542	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.1
3	101824582	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.230769
3	101824609	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.1875
3	101824665	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.133333
3	101824673	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.1
3	101824690	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0909091
3	101824703	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0714286
3	101824705	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0689655
3	142159127	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	142159883	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142160927	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	142160954	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142160968	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	142161225	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	142162079	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	142163488	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	142163519	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142163537	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	142163543	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	142163729	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.2
3	142163778	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142163779	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142163799	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142163830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.785714
3	161073083	A->G	+	ENSG00000163590	PPM1L	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	177021774	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	three_prime_utr	.	.	Alu	0.0581395
3	179397623	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.154206
3	179397851	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.04
3	179397949	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.272727
3	179398104	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.0923077
3	179398210	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.14
3	179398335	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.153846
3	179398393	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.181818
3	179398403	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.2
3	179398428	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.8
3	179398490	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.176471
3	179398497	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.789474
3	179398501	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.133333
3	179398509	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.111111
3	179398517	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.25
3	179398949	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.0526316
3	179399225	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0352941
3	183491628	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	188878660	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.0851064
3	188879039	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.59375
3	188880262	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.461538
3	188880270	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	188880513	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.107143
3	194641758	A->G	-	ENSG00000229334	AC046143.1	antisense	three_prime_utr	.	.	Alu	0.08
3	196236778	A->G	-	ENSG00000163959	SLC51A	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	197784562	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	197884874	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	102753853	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	119297266	A->G	-	ENSG00000164096	C4orf3	protein_coding	three_prime_utr	.	.	Alu	0.0535714
4	123314817	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.25
4	123314856	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.1
4	123314885	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.1
4	123315829	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.2
4	123315839	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.125
4	123315912	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.25
4	123316032	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.25
4	123316041	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	128036454	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	128036516	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	128036529	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	128036530	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	128036532	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	128036549	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	128036581	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	128036609	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	128036611	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	128037415	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.3
4	128037548	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.75
4	128037628	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	139045646	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0322581
4	139045656	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0449438
4	139045658	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	139045692	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0322581
4	139045698	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0454545
4	139045701	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0241935
4	140550905	A->G	+	ENSG00000179387	ELMOD2	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	152622853	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.1
4	152622904	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.434783
4	152622909	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.352941
4	152622939	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.416667
4	152623005	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	152623029	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.5
4	152623030	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.227273
4	152623039	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	152623049	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.130435
4	152623054	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.444444
4	152623140	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0789474
4	152623662	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.1
4	152623683	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.703704
4	152623687	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.481481
4	152623708	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.5
4	152624343	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0333333
4	152624382	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.102564
4	152624389	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0285714
4	152624420	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0344828
4	152624428	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.116667
4	152624479	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	152624544	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	152625465	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0655738
4	152625466	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.031746
4	152625480	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0344828
4	152625598	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0273973
4	152625608	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0576923
4	165075790	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	165076867	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	165077004	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165077073	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.12
4	165077074	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.12
4	165077504	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	165077806	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	165077996	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	176331175	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.342222
4	176331176	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.447368
5	115207624	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	1
5	115830603	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0285714
5	115830748	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.028169
5	119394869	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.7
5	122027214	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.107143
5	122028351	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201823	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	131202347	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131202350	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	131202361	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
5	131203212	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.176471
5	131204123	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.388889
5	131204155	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	134152768	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	134153475	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.3
5	134402612	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0416667
5	143225428	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.15
5	143225436	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	143225441	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.5
5	143225450	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	143225451	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	143225871	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.2
5	149983749	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.3
5	149984581	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	151268176	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0295858
5	151268178	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0231214
5	151268180	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
5	151268188	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0216216
5	151807968	A->G	+	ENSG00000145907	G3BP1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
5	157477823	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.76
5	157477845	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.44
5	157477914	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.5
5	157477942	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.47619
5	157477957	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	157477967	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.125
5	157478374	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	157478388	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.631579
5	157478389	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.263158
5	157478397	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.190476
5	157478552	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.769231
5	157478558	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	157478559	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.25
6	108042167	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.383721
6	108042172	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.292135
6	108042173	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0674157
6	108042197	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0375
6	108042214	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	108042239	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.846154
6	108042249	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.857143
6	108042260	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	108042264	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	108042537	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.25
6	108042554	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.195652
6	108042572	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
6	108042609	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
6	108042610	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
6	108042615	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0972222
6	108042617	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
6	108042619	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0694444
6	108042622	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
6	108042640	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0379747
6	108042685	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.27027
6	108042693	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	109464684	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.25
6	118813772	A->G	-	ENSG00000111877	MCM9	protein_coding	three_prime_utr	.	.	Alu	1
6	149449082	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	149591237	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
6	149725600	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.952381
6	149725605	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.45
6	149725606	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.2
6	149726023	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	149726189	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0298507
6	149726243	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	149726319	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	149772198	A->G	+	ENSG00000120265	PCMT1	protein_coding	three_prime_utr	.	.	Alu	0.217391
6	158973483	A->G	-	ENSG00000130363	RSPH3	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	163566383	A->G	+	ENSG00000112531	QKI	protein_coding	three_prime_utr	.	.	Alu	0.227545
6	163573857	A->G	+	ENSG00000112531	QKI	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	102448522	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	102637153	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.0375
7	102637154	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.025
7	102637177	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.025641
7	106906386	A->G	+	ENSG00000105851	PIK3CG	protein_coding	three_prime_utr	.	.	Alu	0.0597015
7	128305522	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	128307852	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128308786	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	128308795	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	128502778	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	128502863	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.130435
7	128503281	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	128503505	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	128503552	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	128503564	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1
7	128503887	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.05
7	128504264	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	128504285	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0625
7	128504286	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0967742
7	128504714	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.3
7	128504715	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128505012	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	135676088	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.0535714
8	103399698	A->G	-	ENSG00000164933	SLC25A32	protein_coding	three_prime_utr	.	.	Alu	0.0487805
9	112684362	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.125
9	112685251	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.2
9	112686594	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	112686643	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
9	112686665	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
9	112686699	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.04
9	112686725	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
9	112686765	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
9	113261211	A->G	+	ENSG00000176386	CDC26	protein_coding	three_prime_utr	.	.	Alu	0.02
9	124813929	A->G	+	ENSG00000185585	OLFML2A	protein_coding	three_prime_utr	.	.	Alu	0.108696
9	128305925	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
9	128306929	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128306935	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	1
9	128306939	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.25
9	128307568	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128308154	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128308186	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128308208	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	128308366	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128308696	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	128309259	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
9	134906025	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	134906160	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
9	134906190	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.185185
9	134906213	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	134906845	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
9	134906928	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
9	134906948	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.1
9	134906960	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
9	134906964	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
9	134907003	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
9	134907010	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	134907020	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.541667
9	134907050	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	134907064	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	134907066	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.411765
9	134907070	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	137282386	A->G	+	ENSG00000198113	TOR4A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
10	100232640	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.0333333
10	100233140	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.0625
10	100361844	A->G	+	ENSG00000099194	SCD	protein_coding	three_prime_utr	.	.	Alu	0.1875
10	102476467	A->G	+	ENSG00000138111	MFSD13A	protein_coding	three_prime_utr	.	.	Alu	0.157895
10	110135429	A->G	+	ENSG00000148700	ADD3	protein_coding	three_prime_utr	.	.	Alu	0.490132
10	119573162	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.3
10	119573279	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	119573281	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	119573295	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	108365980	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.136364
11	108365981	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	108367007	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0588235
11	108367092	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.08
11	108367154	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	112119359	A->G	+	ENSG00000204370	SDHD	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	116844541	A->G	-	ENSG00000235910	APOA1-AS	antisense	three_prime_utr	.	.	Alu	0.166667
12	100627498	A->G	+	ENSG00000139354	GAS2L3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	101922836	A->G	+	ENSG00000136048	DRAM1	protein_coding	three_prime_utr	.	.	Alu	0.0266667
12	101923010	A->G	+	ENSG00000136048	DRAM1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	101923013	A->G	+	ENSG00000136048	DRAM1	protein_coding	three_prime_utr	.	.	Alu	0.0684932
12	101923018	A->G	+	ENSG00000136048	DRAM1	protein_coding	three_prime_utr	.	.	Alu	0.027027
12	108590451	A->G	-	ENSG00000183160	TMEM119	protein_coding	three_prime_utr	.	.	Alu	0.3
12	108591203	A->G	-	ENSG00000183160	TMEM119	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	108785196	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	116714663	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0967742
12	116715110	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	120460828	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	120460926	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.25
12	122769110	A->G	+	ENSG00000139726	DENR	protein_coding	three_prime_utr	.	.	Alu	0.106061
12	123410996	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	123412318	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	123413120	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	123413177	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.909091
12	123661059	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0235294
12	123662008	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	123662009	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	123662022	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.179487
12	123662035	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	125026751	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0263158
12	125026792	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.021978
12	125026802	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.021978
12	125027611	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	125027615	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	125027947	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	125027988	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.318182
12	125027994	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	125029487	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.021978
12	132772326	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0425532
13	113265279	A->G	+	ENSG00000139842	CUL4A	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	113265295	A->G	+	ENSG00000139842	CUL4A	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	105049500	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.2
15	101070750	A->G	+	ENSG00000154237	LRRK1	protein_coding	three_prime_utr	.	.	Alu	0.153846