Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	AA_change	Amino_Acid	Repeat	AN35_LZ
4	853829	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	upstream_gene_variant	.	Alu	0.05
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.684211
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0540541
19	8492024	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	upstream_gene_variant	.	Alu	0.823529
21	33529731	A->G	-	ENSG00000159131	GART	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.4
21	33529732	A->G	-	ENSG00000159131	GART	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.4
6	43529355	A->G	+	ENSG00000124571	XPO5	protein_coding	three_prime_utr	stop_retained_variant	p.Ter->Ter	Alu	0.2
11	65090498	A->G	+	ENSG00000149823	VPS51	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.636364
3	69076497	A->G	-	ENSG00000144744	UBA3	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.166667
2	73732587	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.2
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.105263
17	82260972	A->G	-	ENSG00000141526	SLC16A3	protein_coding	CDS	.	.	Alu	0.157895
19	2291932	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.117647
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.0769231
19	2292005	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.114286
19	2292009	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.0666667
19	9813404	A->G	-	ENSG00000127452	FBXL12	protein_coding	five_prime_utr	.	.	Alu	0.272727
3	9986966	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.09375
3	9987048	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.0465116
3	9987051	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.0444444
3	9987093	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.15873
3	9987120	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.105263
19	11865967	A->G	+	ENSG00000171291	ZNF439	protein_coding	five_prime_utr	.	.	Alu	0.2
21	37410605	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.545455
21	37410607	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.272727
21	37410631	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.25
21	37410645	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.3
21	37410657	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.142857
7	66740097	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.2
10	72220179	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.125
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0833333
10	72220209	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0425532
10	72220235	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.04
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.177778
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.243243
18	169316	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.181818
16	192589	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.333333
16	192601	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.266667
16	192606	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.157895
16	192667	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	192682	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.333333
16	192704	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.173913
16	192706	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.08
16	192775	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.294118
16	192776	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.176471
16	201525	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	213632	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.107143
16	213677	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.130435
16	213757	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	216458	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.1875
16	216494	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.1
16	216511	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.136364
16	216521	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	216582	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.166667
16	216622	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.181818
16	221093	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.423077
16	221098	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.166667
16	221248	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.176471
9	277304	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.7
9	277387	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.153846
12	306118	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.3
9	355238	A->G	-	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.2
17	398690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	399588	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
17	399613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
17	399662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	400428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
17	400429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.44
17	400449	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
17	400454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	400825	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	400829	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	400830	A->G	-	.	.	.	Intergenic	.	.	Alu	1
20	447109	A->G	-	ENSG00000125875	TBC1D20	protein_coding	Intergenic	.	.	Alu	0.166667
16	500568	A->G	+	ENSG00000090565	RAB11FIP3	protein_coding	Intergenic	.	.	Alu	0.5
16	587865	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
16	587945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
16	588433	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
18	669484	A->G	-	ENSG00000176890	TYMS	protein_coding	Intergenic	.	.	Alu	0.181818
18	679277	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.2
18	683972	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.333333
18	684029	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.454545
19	692555	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.166667
18	696284	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.272727
18	696483	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.291667
18	697494	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.5
18	697507	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.4
18	697533	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.333333
18	697534	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.142857
18	697579	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.785714
18	697583	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.153846
18	697585	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.411765
18	697594	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.105263
18	697603	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	697616	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.2
18	697841	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.515152
18	697891	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.347826
18	697914	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.9
18	697931	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.166667
18	697932	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.130435
18	697954	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	697967	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	697976	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	697987	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.107143
18	698045	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.352941
18	698061	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.235294
18	698066	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.384615
18	698067	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.153846
18	704639	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.153846
18	704640	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.133333
18	704641	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.285714
18	706861	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.571429
18	706886	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.157895
18	706891	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.136364
18	706895	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.08
18	706930	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.347826
18	706947	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.269231
18	706951	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.125
18	706956	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.166667
18	706957	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
18	706967	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	706978	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.210526
18	707012	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.105263
18	707013	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.117647
18	729679	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.230769
18	741170	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.181818
12	757915	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.2
12	757955	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.166667
12	757956	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.166667
11	761394	A->G	+	ENSG00000177156	TALDO1	protein_coding	Intergenic	.	.	Alu	0.727273
11	761445	A->G	+	ENSG00000177156	TALDO1	protein_coding	Intergenic	.	.	Alu	0.2
12	764460	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.538462
12	764480	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.185185
12	764507	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.133333
12	764513	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	1
12	764515	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	1
12	764521	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.173913
12	764522	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.15
12	764525	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.117647
12	764557	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.208333
12	764581	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.105263
12	764591	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.0833333
18	783753	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.166667
18	787183	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.133333
18	787197	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.4
18	787228	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0666667
18	787232	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.153846
18	787238	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.5
18	787244	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.666667
18	787264	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.574468
18	787268	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0784314
18	787279	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0888889
18	787282	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.3
18	787326	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0588235
18	787492	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.142857
18	787527	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.125
18	787562	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.222222
18	787566	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.466667
18	787582	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.105263
18	787598	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.25
18	787628	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.578947
18	787629	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.466667
18	787634	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.47619
4	853832	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.0666667
4	853909	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.1
4	853935	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.238095
4	853946	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.125
4	853973	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.181818
4	853976	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.166667
4	853977	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.166667
4	853980	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.307692
12	866963	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.2
10	900823	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.333333
11	927577	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.111111
11	927601	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.3125
11	927606	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.5
11	927608	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.277778
11	927651	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.125
11	927666	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.117647
11	927667	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.125
11	927688	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.357143
11	927708	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.166667
11	927752	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.181818
7	970073	A->G	-	ENSG00000240230	COX19	protein_coding	Intergenic	.	.	Alu	0.272727
7	974726	A->G	-	ENSG00000240230	COX19	protein_coding	Intergenic	.	.	Alu	0.181818
10	1076906	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.333333
10	1092251	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.2
10	1092252	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.3
20	1143968	A->G	+	ENSG00000125818	PSMF1	protein_coding	Intergenic	.	.	Alu	0.272727
4	1303281	A->G	+	ENSG00000090316	MAEA	protein_coding	Intergenic	.	.	Alu	0.25
4	1303287	A->G	+	ENSG00000090316	MAEA	protein_coding	Intergenic	.	.	Alu	0.125
4	1303321	A->G	+	ENSG00000090316	MAEA	protein_coding	Intergenic	.	.	Alu	1
16	1322879	A->G	+	ENSG00000103275	UBE2I	protein_coding	Intergenic	.	.	Alu	0.153846
X	1342653	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1342666	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.142857
X	1342765	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.117647
X	1342805	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1349265	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1349385	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1360728	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.15
X	1363018	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1363048	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1363049	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.272727
X	1363425	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.8
X	1363429	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.4
X	1363433	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.222222
X	1363465	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	1
X	1363468	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0952381
X	1363473	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0909091
X	1363530	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1363538	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.125
X	1363805	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.4
X	1363848	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1364266	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.454545
X	1364329	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1364343	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1364379	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.333333
X	1364478	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.6
X	1364486	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.6
X	1364563	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	1
X	1364673	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1364674	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.117647
X	1364677	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.478261
X	1364907	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1365036	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1365055	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.461538
X	1365069	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.666667
X	1365104	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.111111
X	1377277	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.266667
X	1377303	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1377308	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.4
X	1377309	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.5
X	1377365	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.666667
X	1377369	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
X	1377373	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1377378	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.214286
X	1377405	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
X	1377411	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.5
X	1377414	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
16	1380813	A->G	-	ENSG00000059145	UNKL	protein_coding	Intergenic	.	.	Alu	0.181818
X	1382798	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114286
X	1382837	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
X	1382849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
X	1382860	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1382863	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
X	1382880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1382889	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
X	1382890	A->G	-	.	.	.	Intergenic	.	.	Alu	0.35
X	1382900	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
X	1382916	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1382919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1382959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.526316
X	1382989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1383097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1383133	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383184	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1383189	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383190	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
X	1383215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	1383237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
X	1383390	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383408	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1383434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.588235
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	1388011	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0571429
17	1388022	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.275862
17	1388063	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.210526
17	1388167	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.583333
17	1388203	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.380952
17	1388394	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.173913
17	1388404	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.130435
17	1388416	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.16
17	1388447	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1388662	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.142857
1	1396395	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.133333
1	1396431	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.125
1	1396473	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	1396498	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.136364
1	1396539	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.166667
1	1396541	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	1396717	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.35
1	1396756	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	1396881	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.363636
17	1447732	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.35
17	1447733	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.6
17	1447745	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.0952381
17	1447754	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.157895
17	1447781	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.166667
17	1524249	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.2
X	1535370	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	0.133333
17	1546099	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.363636
17	1546175	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.5
19	1587170	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.5
16	1647621	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.2
1	1649316	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.2
1	1652864	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.2
16	1653941	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.133333
16	1653953	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.304348
16	1653954	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.590909
16	1653979	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.0952381
16	1653980	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.1
16	1654022	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.642857
16	1654032	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.461538
16	1654068	A->G	+	ENSG00000007545	CRAMP1	protein_coding	Intergenic	.	.	Alu	0.75
17	1668491	A->G	-	ENSG00000174231	PRPF8	protein_coding	Intergenic	.	.	Alu	0.133333
17	1668495	A->G	-	ENSG00000174231	PRPF8	protein_coding	Intergenic	.	.	Alu	0.133333
4	1694185	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.2
4	1694282	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.166667
12	1695549	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.2
12	1695620	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.1875
4	1701325	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.210526
4	1701326	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.105263
16	1754650	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.25
16	1754717	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.157895
1	1822441	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	1822496	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1822499	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	1838537	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.117647
1	1838577	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.08
1	1838583	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1838609	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3125
1	1871371	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.5
1	1871413	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1871419	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.846154
1	1871446	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.4
1	1872064	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.111111
1	1872070	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	1872094	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1872107	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1872130	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.136364
1	1872140	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	1872153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.210526
1	1872170	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1872176	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1872220	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.461538
1	1873099	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	1881506	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1881672	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1881673	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.25
1	1883992	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.075
1	1884076	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.121951
1	1884104	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0416667
1	1884130	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	1884153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.208333
1	1884158	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1884166	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.08
1	1884237	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.173913
1	1884238	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1884260	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1884283	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1884302	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
4	1884944	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.153846
4	1884947	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.133333
4	1885003	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.1875
4	1885030	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	1885031	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.272727
4	1885085	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.2
1	1885586	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1885695	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.125
1	1885724	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	1885726	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	1894557	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.166667
9	2034176	A->G	+	ENSG00000080503	SMARCA2	protein_coding	Intergenic	.	.	Alu	0.0526316
17	2038204	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.647059
17	2038218	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.65
17	2038227	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	2038245	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	1
17	2038307	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.380952
19	2206437	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.272727
19	2206447	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.272727
19	2206454	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.181818
19	2206482	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.272727
16	2259700	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.2
16	2260190	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.214286
16	2260218	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.24
16	2260228	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.16
16	2260241	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.2
16	2260245	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.08
16	2260248	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.148148
16	2260252	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.304348
16	2260253	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.173913
16	2260271	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	2260288	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0434783
16	2260329	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0512821
16	2260332	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.117647
16	2260333	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.171429
16	2260335	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0571429
16	2260337	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	2260338	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.677419
16	2260372	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0526316
16	2260374	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0789474
1	2263912	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.125
1	2263918	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.307692
1	2263942	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.25
1	2263943	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.153846
6	2282970	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.3
19	2284423	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	2284716	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.277778
19	2284759	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.15625
19	2284787	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0555556
19	2284823	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2284853	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.461538
19	2284866	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2284876	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.105263
19	2292026	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.192308
19	2292081	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.04
19	2292094	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1
19	2292097	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0555556
19	2292113	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.206897
19	2292170	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.190476
19	2292291	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.272727
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.105263
19	2292533	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.176471
19	2292568	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	2292590	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.230769
19	2292594	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2292619	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.3
6	2294605	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.5
6	2294614	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.142857
6	2294635	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.5
6	2294636	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.5
6	2294640	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.636364
6	2294641	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.909091
1	2296346	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.2
19	2301717	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.384615
19	2301848	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
17	2320394	A->G	-	ENSG00000167720	SRR	protein_coding	Intergenic	.	.	Alu	0.272727
17	2455053	A->G	-	ENSG00000127804	METTL16	protein_coding	Intergenic	.	.	Alu	0.153846
4	2493527	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2493565	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.333333
4	2493580	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0869565
4	2493601	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.105263
4	2493624	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2493664	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.285714
4	2493665	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.214286
4	2499953	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2500054	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.666667
4	2500060	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	1
4	2500064	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2502507	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2502831	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2502882	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.5
4	2502930	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.576923
4	2502963	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.217391
4	2540876	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2540916	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2540924	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.3125
4	2541016	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2543601	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.08
4	2543602	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.192308
4	2543670	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0909091
4	2543671	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.136364
4	2543692	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.105263
4	2543711	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.136364
4	2543738	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.151515
4	2543751	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.290323
4	2543760	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.1
4	2543825	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.133333
4	2558053	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.133333
4	2558063	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.117647
4	2558071	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.25
4	2558087	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0769231
4	2558111	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.185185
4	2558121	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0740741
4	2558125	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.185185
4	2558151	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0606061
4	2558152	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.393939
4	2558175	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.1
4	2589929	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.357143
4	2589954	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2589973	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.363636
4	2589974	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
17	2600318	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.333333
17	2600319	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.272727
17	2600360	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2611212	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.272727
17	2611214	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.3
17	2611215	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.3
17	2611241	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2611347	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.1
17	2611361	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.214286
X	2706239	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.333333
X	2707245	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.181818
X	2724941	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.117647
X	2730820	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.176471
7	2737482	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.3
7	2737502	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.166667
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
X	2744279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	2744299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	2744728	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	2744742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2744772	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2744773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	2744780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2744794	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
X	2744804	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
X	2744813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	2744814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	2744825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	2744844	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	2744871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
X	2744880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	2744903	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2744911	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
X	2744912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	2744943	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
X	2744977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
7	2756911	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0869565
7	2756946	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.25
7	2756955	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.153846
7	2756956	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.153846
7	2756962	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0714286
7	2756979	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.222222
7	2757012	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.1
7	2757017	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0952381
7	2757027	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0833333
7	2757028	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.791667
7	2757030	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0652174
7	2757069	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.85
7	2757314	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.348837
7	2757315	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.391304
7	2757318	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.23913
7	2757329	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0454545
7	2757330	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.113636
7	2757339	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0512821
7	2765812	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.153846
18	2797797	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.4
18	2797802	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2797806	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.5
12	2840332	A->G	+	ENSG00000111203	ITFG2	protein_coding	Intergenic	.	.	Alu	0.2
7	2841219	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.0952381
4	2846951	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.2
4	2848100	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.176471
Y	2949719	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.142857
Y	2949720	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.142857
Y	2949770	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.26087
10	3075778	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.3
10	3075782	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.272727
10	3075784	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.2
10	3075940	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.2
4	3140114	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.125
4	3140193	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.454545
4	3140210	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.222222
19	3141222	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.16
19	3141223	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.08
19	3141402	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.333333
4	3143198	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.230769
19	3147696	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.266667
19	3181615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
19	3182262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
19	3182480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	3183558	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	3183678	A->G	+	.	.	.	Intergenic	.	.	Alu	0.818182
19	3183709	A->G	+	.	.	.	Intergenic	.	.	Alu	0.529412
19	3183724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
19	3183741	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
19	3183763	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
4	3185792	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.181818
4	3190468	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.5
16	3462031	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.363636
9	3470375	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.333333
9	3470383	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.1
9	3470599	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	3470600	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.230769
19	3484728	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	3501694	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.181818
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.181818
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.142857
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.272727
11	3689879	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3689887	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3701426	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3701753	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.105263
11	3701814	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.625
11	3701818	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
11	3701822	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3701824	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.666667
11	3716489	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3722205	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3743130	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3782636	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3782640	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
11	3782675	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0606061
11	3782680	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0625
11	3782681	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0606061
11	3782699	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3782707	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3782737	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.117647
11	3789632	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0952381
11	3789698	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.105263
11	3794389	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.176471
16	3802296	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.2
16	3856204	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.166667
11	3886855	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.2
11	3886960	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.285714
11	3886989	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	3902431	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.166667
17	3911107	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.157895
17	3911187	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.133333
17	3911206	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.136364
17	3911207	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.173913
17	3911215	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.107143
17	3911225	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.114286
17	3911233	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0588235
17	3911237	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.105263
17	3911260	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0769231
17	3911276	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.209302
17	3912468	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0540541
17	3912469	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0555556
20	3912702	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.35
20	3912703	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.6
20	3912711	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.117647
20	3912764	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.133333
20	3912768	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.571429
20	3912794	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.47619
20	3912803	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.217391
20	3912829	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.285714
20	3912862	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.0645161
20	3912865	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.272727
20	3912906	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.235294
17	3934620	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.181818
19	3956946	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
20	3981617	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.8125
20	3981634	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.117647
20	3981644	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.681818
20	3985801	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.235294
20	3985817	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.157895
20	3986384	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3986474	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	4003780	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	4003781	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
19	4029768	A->G	-	ENSG00000105229	PIAS4	protein_coding	Intergenic	.	.	Alu	0.363636
6	4036805	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.736842
6	4036838	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.1
19	4041184	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	4097120	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.2
11	4097134	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.272727
11	4097166	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.352941
11	4097175	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.176471
11	4097188	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.294118
11	4097192	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.166667
11	4097198	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	4114299	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.166667
11	4114350	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.153846
11	4114351	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.166667
11	4114391	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.2
11	4114401	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.25
11	4114405	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.272727
11	4114432	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.133333
11	4114546	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.416667
6	4119412	A->G	-	ENSG00000185689	C6orf201	protein_coding	Intergenic	.	.	Alu	0.4
6	4119413	A->G	-	ENSG00000185689	C6orf201	protein_coding	Intergenic	.	.	Alu	0.2
17	4287226	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.3
17	4287242	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.2
17	4339357	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.210526
17	4339373	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.533333
17	4339381	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.25
17	4339388	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.153846
17	4339442	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.526316
17	4339443	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.736842
17	4339469	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.318182
17	4339522	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.238095
17	4339537	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.125
17	4339648	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.105263
17	4339688	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.105263
17	4339689	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.176471
17	4339727	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.642857
17	4339786	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.307692
17	4339787	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.153846
17	4339792	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.166667
17	4346546	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.166667
17	4346604	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.125
17	4346611	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.133333
17	4346612	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.133333
17	4346614	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.230769
17	4346618	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.3
17	4347567	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.3
17	4347571	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.25
17	4347572	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.461538
17	4347573	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.307692
17	4347613	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.375
17	4347639	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.307692
17	4347701	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.133333
16	4348723	A->G	-	ENSG00000217930	PAM16	protein_coding	Intergenic	.	.	Alu	0.388889
16	4348777	A->G	-	ENSG00000217930	PAM16	protein_coding	Intergenic	.	.	Alu	0.3
16	4348794	A->G	-	ENSG00000217930	PAM16	protein_coding	Intergenic	.	.	Alu	0.3
17	4353962	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	4353978	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.117647
17	4442545	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.214286
17	4469498	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.5
17	4469525	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.153846
17	4469531	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.181818
17	4469534	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.181818
20	4573101	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	4629952	A->G	+	ENSG00000102858	MGRN1	protein_coding	Intergenic	.	.	Alu	0.166667
16	4669327	A->G	+	ENSG00000102858	MGRN1	protein_coding	Intergenic	.	.	Alu	0.3
16	4675651	A->G	+	ENSG00000102858	MGRN1	protein_coding	Intergenic	.	.	Alu	0.5
7	4695996	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.214286
7	4704272	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.357143
7	4708883	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.181818
7	4708971	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.307692
7	4709015	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.153846
9	4738874	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.153846
16	4816236	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	4816251	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.111111
16	4816319	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4817029	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.333333
16	4817068	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	1
16	4817072	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.2
16	4848986	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.363636
16	4855670	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4855754	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4855785	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.307692
16	4855799	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.333333
17	4965185	A->G	-	ENSG00000091640	SPAG7	protein_coding	Intergenic	.	.	Alu	0.2
3	5127710	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	5127716	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0555556
3	5127722	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0465116
3	5127723	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.232558
3	5127752	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.423729
3	5127762	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0588235
3	5127785	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0416667
3	5127793	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0697674
3	5127912	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.214286
3	5127934	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.148148
3	5127935	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.111111
3	5127973	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0606061
3	5127992	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0465116
3	5128007	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0555556
3	5128012	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	5128056	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.103448
3	5128075	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0857143
3	5128083	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.103448
3	5128084	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.285714
20	5131080	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.166667
3	5133791	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.166667
3	5159426	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.176471
3	5159444	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.117647
3	5159481	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.153846
3	5159482	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.153846
7	5196850	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.166667
7	5196941	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0833333
7	5196959	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0571429
7	5196960	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0588235
7	5196985	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	5196992	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.190476
7	5196997	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.136364
7	5197005	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.1875
7	5197032	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0882353
7	5197033	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0882353
7	5197037	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0512821
7	5325621	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.181818
7	5366462	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5366468	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3
7	5366493	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.153846
7	5366495	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.285714
7	5366496	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.214286
7	5366506	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.266667
7	5372196	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
17	5374760	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.272727
17	5374914	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.153846
17	5398003	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.0769231
17	5398061	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.105263
7	5398098	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3
7	5398223	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5398308	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.4
7	5398309	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.4
7	5398331	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.181818
7	5398347	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.545455
7	5398348	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.181818
7	5398402	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5398407	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.142857
7	5398442	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5398451	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5398461	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.117647
7	5398465	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.210526
7	5398477	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0666667
7	5398514	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.114286
7	5398515	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0606061
7	5398586	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.117647
7	5398742	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.121212
17	5399027	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.318182
7	5414446	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.1
7	5414545	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5414551	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.454545
7	5415444	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.5
7	5415445	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.352941
7	5415473	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.117647
7	5415474	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.125
7	5415491	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.111111
7	5415506	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.133333
7	5415510	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.533333
7	5415515	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.727273
7	5415545	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.176471
7	5415547	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.111111
7	5415563	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5415572	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5415582	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.294118
7	5415605	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5415608	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5415618	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.416667
7	5415627	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.230769
7	5436768	A->G	+	ENSG00000155034	FBXL18	protein_coding	Intergenic	.	.	Alu	0.2
4	5457752	A->G	+	ENSG00000152953	STK32B	protein_coding	Intergenic	.	.	Alu	0.363636
4	5457753	A->G	+	ENSG00000152953	STK32B	protein_coding	Intergenic	.	.	Alu	0.909091
4	5457778	A->G	+	ENSG00000152953	STK32B	protein_coding	Intergenic	.	.	Alu	0.3
4	5457787	A->G	+	ENSG00000152953	STK32B	protein_coding	Intergenic	.	.	Alu	0.363636
20	5601507	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5601533	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.3
20	5601569	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.545455
20	5601570	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
7	5611614	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
19	5658576	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.3
19	5658584	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.272727
19	5658585	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.181818
19	5658656	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.153846
19	5658665	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.181818
19	5659185	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.2
19	5659254	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.133333
19	5659255	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.125
19	5659521	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.5
7	5661134	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
19	5709054	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.3
19	5715697	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	5715721	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.391304
19	5715722	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	5715732	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.24
19	5715751	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.666667
19	5715758	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.166667
19	5715800	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.454545
19	5715803	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.333333
19	5715823	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.333333
19	5717836	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	5742736	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.3125
7	5742815	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.153846
7	6033004	A->G	-	ENSG00000157999	ANKRD61	protein_coding	Intergenic	.	.	Alu	0.105263
7	6033041	A->G	-	ENSG00000157999	ANKRD61	protein_coding	Intergenic	.	.	Alu	0.176471
7	6033057	A->G	-	ENSG00000157999	ANKRD61	protein_coding	Intergenic	.	.	Alu	0.176471
7	6033107	A->G	-	ENSG00000157999	ANKRD61	protein_coding	Intergenic	.	.	Alu	0.3
19	6046818	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.2
19	6046888	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.333333
19	6046902	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.3
19	6084702	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.266667
19	6084703	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.133333
7	6135386	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.2
7	6135393	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.181818
7	6135530	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.181818
10	6153009	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.181818
10	6153644	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.181818
7	6386664	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.153846
7	6396757	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.153846
7	6396915	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.142857
7	6397120	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	1
7	6397314	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.142857
7	6397318	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.615385
7	6397334	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.2
7	6397369	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.230769
7	6397433	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.2
7	6397449	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.272727
7	6397475	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.230769
7	6397484	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.125
7	6397495	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.0625
18	6408739	A->G	-	ENSG00000154655	L3MBTL4	protein_coding	Intergenic	.	.	Alu	0.230769
18	6408742	A->G	-	ENSG00000154655	L3MBTL4	protein_coding	Intergenic	.	.	Alu	0.357143
7	6419159	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.153846
9	6441188	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.384615
9	6488039	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.166667
9	6488054	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.384615
12	6739941	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
4	6786927	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.166667
4	6786928	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.25
4	6786933	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.142857
4	6833545	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.363636
4	6833550	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.2
1	6844417	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.25
1	6844418	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.5
1	6844549	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.44
1	6844565	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	6844582	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	6849914	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.130435
1	6849915	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.173913
1	6849977	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.117647
6	7173539	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.142857
6	7173587	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.272727
6	7173595	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.142857
6	7173730	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.272727
6	7219149	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.230769
6	7219155	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.125
17	7472573	A->G	-	ENSG00000174282	ZBTB4	protein_coding	Intergenic	.	.	Alu	0.153846
17	7472713	A->G	-	ENSG00000174282	ZBTB4	protein_coding	Intergenic	.	.	Alu	0.153846
17	7472717	A->G	-	ENSG00000174282	ZBTB4	protein_coding	Intergenic	.	.	Alu	0.142857
12	7923558	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.384615
12	7923563	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.5
12	7923600	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.307692
12	7923841	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.192308
12	7923842	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.692308
12	7923874	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	7923901	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0540541
12	7923906	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.146341
12	7923907	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.2
12	7923933	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.242424
12	7923936	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	7923975	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.666667
12	7923986	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.133333
12	7935028	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.5
19	7976883	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.142857
19	7976887	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.222222
19	7976891	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.117647
19	7976925	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.2
20	8141369	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.545455
20	8141502	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.181818
20	8141512	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.692308
20	8229981	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.285714
17	8271776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	8271782	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	8271818	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	8272003	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	8272077	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
20	8402724	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	8403929	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.142857
1	8403955	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.285714
1	8403963	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.263158
1	8403968	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.55
1	8403995	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.133333
1	8403998	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.263158
1	8403999	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.105263
1	8404004	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.142857
1	8404057	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.6
1	8404062	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.277778
1	8404066	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.157895
1	8404079	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.285714
1	8404293	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.636364
1	8404295	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.461538
1	8446812	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.133333
17	8455647	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	8471043	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.3
19	8471985	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.1
19	8472024	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.15625
19	8472073	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0425532
19	8472077	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0625
19	8480122	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.15
19	8480131	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.36
19	8480180	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0869565
19	8480200	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0645161
19	8480211	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0555556
19	8480215	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.05
19	8480216	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.157895
19	8480223	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0810811
19	8480255	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.111111
19	8480256	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0444444
19	8480265	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.117647
1	8480277	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.4
19	8480289	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.159091
19	8480326	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.15625
19	8480339	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.314286
19	8492060	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.2
19	8492069	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.1875
19	8492138	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.357143
19	8493858	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	8493890	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.15
19	8493936	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.117647
19	8494705	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
19	8494717	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8494832	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.363636
20	8496400	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
1	8529382	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.142857
1	8529444	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.166667
1	8545821	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.117647
1	8545848	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8545929	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.230769
1	8545956	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.111111
1	8545969	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.571429
1	8546128	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.6
1	8574542	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0909091
1	8574547	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0869565
1	8574552	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0869565
1	8582530	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.294118
1	8582635	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.142857
1	8582638	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.176471
1	8582645	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.1875
1	8582708	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.166667
1	8600827	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.133333
1	8601049	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8601050	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8601157	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.307692
1	8607674	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.4375
1	8607678	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.588235
1	8607811	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.142857
1	8607815	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.166667
1	8607818	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8607822	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.363636
1	8607846	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8608001	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.4
18	8616814	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.277778
18	8616818	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.411765
18	8616831	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.166667
18	8616844	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.117647
18	8616849	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.75
18	8616877	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.12
18	8616911	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.25
18	8616913	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.724138
9	8618803	A->G	-	ENSG00000153707	PTPRD	protein_coding	Intergenic	.	.	Alu	0.142857
18	8632157	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.157895
18	8632158	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.166667
18	8632163	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.133333
18	8632199	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.181818
2	8746224	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.133333
2	8746240	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.142857
2	8746251	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.545455
2	8746325	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.181818
16	8852150	A->G	-	ENSG00000260276	AC022167.2	antisense	Intergenic	.	.	Alu	0.636364
20	8861609	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.117647
20	8861619	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.111111
19	9144030	A->G	-	ENSG00000130803	ZNF317	protein_coding	Intergenic	.	.	Alu	0.307692
18	9156087	A->G	+	ENSG00000101745	ANKRD12	protein_coding	Intergenic	.	.	Alu	0.416667
18	9156088	A->G	+	ENSG00000101745	ANKRD12	protein_coding	Intergenic	.	.	Alu	0.5
11	9194880	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.1
11	9230047	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9230330	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.294118
11	9230357	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9230369	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.263158
11	9230379	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9230381	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9230419	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0714286
11	9230420	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.37037
11	9230421	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0740741
11	9230473	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0909091
11	9230474	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.227273
11	9238693	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9238907	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0869565
11	9238924	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.176471
11	9238996	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9239074	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9239305	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9239528	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9239531	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.25
11	9239605	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9239661	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9263313	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.466667
11	9263345	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9263358	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.538462
11	9263359	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9263385	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
11	9263425	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.25
11	9263426	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9289125	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.692308
11	9289216	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.45
11	9289224	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.208333
11	9289263	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.222222
11	9289276	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.909091
11	9306116	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.285714
18	9365652	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.0769231
18	9374984	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.176471
18	9375020	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.153846
18	9375046	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.466667
18	9375060	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.142857
18	9375117	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.142857
18	9375119	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.142857
11	9444553	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.272727
11	9444658	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.166667
11	9444704	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.363636
2	9506469	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.166667
2	9507774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.538462
2	9507787	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9507851	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.625
2	9507906	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.454545
2	9507907	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.166667
2	9513080	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9513133	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9513135	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9523944	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.176471
2	9523990	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9523999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.461538
19	9532421	A->G	-	ENSG00000130818	ZNF426	protein_coding	Intergenic	.	.	Alu	0.5
19	9532465	A->G	-	ENSG00000130818	ZNF426	protein_coding	Intergenic	.	.	Alu	0.142857
2	9532537	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.375
2	9532548	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9532561	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9532586	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.105263
19	9583417	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.333333
19	9583422	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.142857
19	9583423	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.230769
2	9593341	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.238095
2	9593347	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.583333
2	9597948	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.25
2	9597952	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.190476
2	9597958	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.3
2	9598037	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.272727
2	9598038	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	9607153	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.0833333
2	9607154	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.363636
18	9607921	A->G	-	ENSG00000154845	PPP4R1	protein_coding	Intergenic	.	.	Alu	0.142857
8	9635049	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.363636
8	9635059	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.416667
8	9635090	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.208333
8	9635091	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.130435
8	9635120	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.208333
8	9635135	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.157895
1	9669918	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.125
1	9669919	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.125
1	9669925	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.125
1	9674570	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.3
1	9705376	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.235294
1	9705382	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.1
1	9705418	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.181818
1	9705439	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.0833333
1	9705443	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.318182
1	9705463	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.307692
1	9705480	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.142857
3	9800939	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.25
3	9801977	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.214286
3	9801986	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.133333
3	9802118	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.105263
3	9802119	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.631579
3	9802128	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.117647
11	9833559	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.15
1	9927387	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9927822	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.363636
1	9927832	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.3
1	9927874	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.923077
1	9927878	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.230769
1	9927891	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9927893	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.25
1	9927894	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.769231
1	9927902	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9927907	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.384615
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.267857
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.155172
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10152258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10152265	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
3	10152278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.296296
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.290909
3	10152314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114754
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.344828
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6875
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.588235
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10152966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10152967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10152991	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
3	10153089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
3	10153119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	10153126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0576923
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.206897
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.292683
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.131579
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10153223	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.169811
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
3	10153295	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.163265
3	10153301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.177778
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10153357	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.37037
3	10153379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10153408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.305556
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.805556
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.128205
19	10167258	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.142857
19	10167298	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	10167360	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	10167368	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.0714286
19	10167469	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.15
2	10199526	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.352941
2	10199527	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.277778
2	10199689	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.2
2	10199978	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.181818
2	10200007	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.153846
2	10200033	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.375
2	10200042	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.133333
2	10200062	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.166667
2	10213368	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	10213373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	10213389	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
2	10213471	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	10309023	A->G	-	ENSG00000157020	SEC13	protein_coding	Intergenic	.	.	Alu	0.3
5	10368563	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.8
5	10368673	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.916667
5	10368679	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.272727
5	10368680	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.5
5	10368849	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.1875
1	10500216	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.133333
1	10500217	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.153846
1	10500224	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.166667
1	10500238	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.545455
19	10547736	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.6
19	10616090	A->G	+	ENSG00000129353	SLC44A2	protein_coding	Intergenic	.	.	Alu	0.153846
2	10638888	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.153846
2	10638892	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.461538
19	10724039	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.176471
5	10759827	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.117647
5	10759837	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	1
5	10759840	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	1
5	10759879	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.125
5	10759893	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.153846
5	10759911	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.384615
5	10759958	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.0952381
5	10759982	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.117647
19	10963095	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.12
19	10963117	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.142857
19	10963118	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.26087
19	10963123	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.157895
19	10963259	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.181818
1	11020799	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.142857
12	11054998	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.133333
1	11078038	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.117647
1	11078104	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.214286
1	11078127	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.4
1	11078180	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	1
1	11078245	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.0869565
19	11107883	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.416667
19	11107984	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.4
10	11196754	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0444444
10	11196755	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0408163
10	11196804	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0454545
10	11196838	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.118644
10	11196839	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.166667
10	11196844	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0350877
10	11196879	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
10	11196880	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0714286
12	11245506	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.615385
12	11245507	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.5
12	11245609	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.2
12	11245614	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.9
12	11245640	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.818182
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.6
10	11554932	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.3
10	11554938	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.5
10	11555150	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.454545
16	11575949	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.181818
16	11575954	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.3
10	11583286	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.2
10	11583326	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.6
10	11583386	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.263158
10	11583387	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.166667
10	11583394	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.0909091
10	11583397	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.0952381
10	11583463	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.230769
10	11583464	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.16
12	11660349	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
12	11660350	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.176471
12	11660395	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.25
12	11660404	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
12	11660409	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
12	11660452	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.179487
12	11660468	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.210526
12	11660478	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.272727
12	11660479	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.413043
12	11660484	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11660508	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0810811
12	11660519	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.295455
12	11660520	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.3
12	11660527	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.113636
12	11660562	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.386364
16	11707545	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.272727
16	11707586	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11709315	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.210526
16	11709349	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.153846
16	11709355	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.307692
16	11709390	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.238095
16	11709391	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.190476
12	11716111	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0416667
12	11716210	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.05
12	11733177	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11733225	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11734358	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.133333
12	11734397	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.105263
12	11734431	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0952381
12	11734444	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0769231
12	11734445	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0740741
12	11734447	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0714286
12	11734448	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0714286
12	11777093	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11784210	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11784246	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0952381
12	11784253	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.230769
12	11784254	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11784328	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11808902	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0487805
12	11808993	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
12	11809029	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0555556
12	11809034	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0540541
12	11818470	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.111111
8	11825317	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.2
8	11825356	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.3
12	11845097	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.8
12	11845750	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11845751	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.214286
12	11845789	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.307692
12	11845790	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11845861	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.636364
12	11845865	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11855185	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.142857
19	11865799	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.636364
19	11865916	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.454545
19	11865933	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.153846
19	11891175	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.6
19	11891176	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.9
11	11892781	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
19	11896134	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.333333
19	11896160	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.4
19	11897687	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.181818
16	11911613	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.25
16	11911713	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.153846
19	11932223	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	1
19	11932237	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.272727
19	11991986	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
19	11992022	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
19	11992053	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
19	11993599	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.214286
19	12001958	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.5
19	12002040	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.4
19	12002081	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
19	12004259	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.194444
19	12004308	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.222222
19	12004322	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.0714286
19	12004371	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
19	12004391	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
19	12020752	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.333333
19	12020755	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.153846
19	12020756	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.142857
19	12020757	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.214286
19	12020758	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.166667
10	12026801	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.214286
10	12026817	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.117647
10	12026835	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.153846
19	12029368	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.1875
19	12029962	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.142857
19	12030002	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.181818
19	12031087	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.142857
18	12031674	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.3
19	12036373	A->G	+	ENSG00000257355	AC008770.1	protein_coding	Intergenic	.	.	Alu	0.125
19	12036414	A->G	+	ENSG00000257355	AC008770.1	protein_coding	Intergenic	.	.	Alu	0.428571
19	12036434	A->G	+	ENSG00000257355	AC008770.1	protein_coding	Intergenic	.	.	Alu	0.25
19	12041512	A->G	+	ENSG00000257355	AC008770.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	12041535	A->G	+	ENSG00000257355	AC008770.1	protein_coding	Intergenic	.	.	Alu	0.111111
19	12041602	A->G	+	ENSG00000257355	AC008770.1	protein_coding	Intergenic	.	.	Alu	0.333333
10	12134677	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.2
19	12178802	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.166667
19	12178803	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.222222
19	12178827	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.117647
19	12178862	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.285714
19	12289815	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.3
10	12358493	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.2
10	12358515	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.181818
10	12374005	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.111111
10	12374084	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.153846
10	12374139	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.166667
10	12406602	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.333333
19	12511590	A->G	-	ENSG00000242852	ZNF709	protein_coding	Intergenic	.	.	Alu	0.25
19	12523198	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.117647
19	12523203	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.25
19	12523204	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.375
19	12523255	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.166667
3	12534649	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.307692
3	12534657	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.181818
3	12534674	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.111111
3	12534683	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.294118
3	12534697	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.352941
3	12595973	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12641704	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.363636
3	12641710	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12641711	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	12654065	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.133333
19	12660856	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.333333
19	12660864	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.235294
19	12660887	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.315789
19	12660896	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.25
18	12721033	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.111111
Y	12772697	A->G	+	ENSG00000114374	USP9Y	protein_coding	Intergenic	.	.	Alu	0.272727
Y	12772710	A->G	+	ENSG00000114374	USP9Y	protein_coding	Intergenic	.	.	Alu	0.153846
Y	12772728	A->G	+	ENSG00000114374	USP9Y	protein_coding	Intergenic	.	.	Alu	0.214286
18	12850407	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.2
18	12967640	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.0952381
18	12967699	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.238095
18	12967700	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.636364
18	12967704	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.5
18	12967732	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.333333
18	12967755	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.153846
18	12967799	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.0909091
18	12967807	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.24
18	12967820	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.217391
18	12967834	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.0909091
18	12967835	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.148148
18	12971559	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.181818
18	13321627	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.181818
18	13321740	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.444444
18	13321741	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.529412
18	13321746	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.2
Y	13395391	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.727273
Y	13395544	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	13395556	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.583333
Y	13395563	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.636364
Y	13396003	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0810811
Y	13396013	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.114286
Y	13396022	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0645161
Y	13396028	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0526316
Y	13396031	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.463415
Y	13396104	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.217391
Y	13396106	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0740741
Y	13396113	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0740741
Y	13396184	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.384615
Y	13396185	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.153846
18	13399091	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.3
18	13399093	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.2
18	13411158	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.545455
18	13601533	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.181818
6	13648212	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0555556
6	13648271	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0606061
6	13648278	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.129032
6	13648286	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.405405
6	13648308	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.217391
6	13648312	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.16
6	13648315	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.115385
6	13648325	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0869565
6	13648351	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0666667
11	13672435	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0512821
11	13672491	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0512821
11	13672500	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.04
6	13686147	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.105263
6	13686159	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0689655
6	13686212	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.25
6	13686220	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.1
6	13686228	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.192308
11	13703789	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.272727
11	13703868	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.133333
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.482759
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.6875
11	13703950	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.108108
11	13703959	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0526316
11	13703964	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.1875
11	13703989	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	13703994	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.16
11	13703999	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.217391
11	13704027	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.08
1	13755823	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.230769
1	13755996	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.64
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.68
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.352941
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
6	14121399	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.2
19	14389655	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.333333
19	14389656	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14414417	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.3
19	14414707	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.166667
19	14414708	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.230769
19	14414757	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.2
16	14596883	A->G	-	ENSG00000140694	PARN	protein_coding	Intergenic	.	.	Alu	0.2
16	14596924	A->G	-	ENSG00000140694	PARN	protein_coding	Intergenic	.	.	Alu	0.4
16	14596925	A->G	-	ENSG00000140694	PARN	protein_coding	Intergenic	.	.	Alu	0.266667
21	14980255	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.2
16	14983385	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15014132	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.117647
3	15018662	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.2
3	15018807	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.416667
3	15018838	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.230769
3	15018850	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.142857
3	15018881	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.2
21	15035757	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.0434783
6	15254801	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.4
6	15254853	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.222222
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.625
6	15254862	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15254921	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.157895
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.5
6	15254931	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.190476
6	15270820	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15270821	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15270861	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15270873	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15277992	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15298496	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15298515	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	15298559	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0967742
6	15298582	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15
19	15333727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	15333751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	15334718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	15339279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
19	15339875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
6	15343108	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15343109	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15343149	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
19	15345663	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
19	15345687	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
19	15345747	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	15345748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	15345806	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	15345815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
19	15357900	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.3
19	15463214	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.142857
19	15463218	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.214286
19	15463224	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.230769
19	15463372	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.363636
19	15463388	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.3
9	15497384	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.105263
9	15497442	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.190476
9	15497443	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.238095
9	15497509	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.583333
9	15497565	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15566838	A->G	-	ENSG00000047579	DTNBP1	protein_coding	Intergenic	.	.	Alu	0.3
6	15566841	A->G	-	ENSG00000047579	DTNBP1	protein_coding	Intergenic	.	.	Alu	0.2
3	15567287	A->G	-	ENSG00000131373	HACL1	protein_coding	Intergenic	.	.	Alu	0.5
3	15567306	A->G	-	ENSG00000131373	HACL1	protein_coding	Intergenic	.	.	Alu	0.6
6	15659645	A->G	-	ENSG00000047579	DTNBP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	15688396	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.133333
1	15688397	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.2
1	15688431	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	15688432	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	15688450	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.130435
1	15688531	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.173913
1	15688985	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.142857
1	15689029	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.166667
1	15689121	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15689168	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.3
1	15689227	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.181818
1	15692019	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15692028	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15701313	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15701382	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.272727
1	15701383	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.2
16	15705815	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.583333
16	15705818	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15705834	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15705910	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.142857
1	15710047	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.133333
1	15710052	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.157895
1	15710106	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.2
3	15716094	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.235294
1	15878790	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.2
1	15878889	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.222222
1	15878890	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.157895
1	15878903	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.2
1	15878922	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.176471
1	15901412	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.2
12	15901699	A->G	+	ENSG00000023734	STRAP	protein_coding	Intergenic	.	.	Alu	0.2
12	15901843	A->G	+	ENSG00000023734	STRAP	protein_coding	Intergenic	.	.	Alu	0.125
12	15901845	A->G	+	ENSG00000023734	STRAP	protein_coding	Intergenic	.	.	Alu	0.25
12	15902032	A->G	+	ENSG00000023734	STRAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	15902056	A->G	+	ENSG00000023734	STRAP	protein_coding	Intergenic	.	.	Alu	0.153846
16	15952758	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.114286
16	15952766	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.152174
16	15952775	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	15952801	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.05
16	15952815	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.116279
16	15952820	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.341463
16	15952839	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.559322
16	15952844	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0392157
16	15952929	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.130435
16	15952932	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.297872
16	15952955	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0425532
16	15952997	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.097561
16	15953025	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0526316
16	15953067	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.384615
16	15953081	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	15953102	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.111111
16	15953126	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15953135	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15953216	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.384615
16	15953225	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.363636
16	15953288	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.470588
16	15953304	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.130435
16	15967717	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15973874	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15973900	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15982695	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.176471
16	15982763	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.125
16	15989011	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15989032	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15999360	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.307692
16	15999426	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.461538
16	15999429	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.5
16	15999430	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.615385
16	15999484	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.190476
16	15999492	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.52381
16	15999494	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15999504	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	16002621	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	16002625	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	16002633	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
4	16012278	A->G	-	ENSG00000007062	PROM1	protein_coding	Intergenic	.	.	Alu	0.2
17	16021284	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.148148
17	16021297	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.0666667
17	16021329	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.0909091
17	16049751	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.272727
17	16050387	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.2
16	16053573	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.117647
16	16053636	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16053666	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.214286
16	16053690	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.4
16	16057109	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	16057236	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.117647
16	16057279	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.222222
19	16080701	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	1
19	16082839	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16086010	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0952381
16	16089427	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.235294
16	16089608	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0789474
16	16089614	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0444444
16	16089645	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16089660	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.097561
16	16089669	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0588235
16	16089709	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	16089724	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	16089756	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.26087
16	16089757	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	16089801	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.214286
16	16089864	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	16096038	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.4
16	16096047	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.230769
16	16096081	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
17	16107090	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.125
17	16107098	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	16107100	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	16107161	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.117647
16	16153824	A->G	+	ENSG00000091262	ABCC6	protein_coding	Intergenic	.	.	Alu	0.333333
19	16156176	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.5
19	16156936	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.181818
19	16156968	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	16240992	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
1	16240996	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
1	16241000	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	16241001	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
2	16419342	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.307692
19	16638369	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.1875
19	16638371	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	1
19	16638389	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.833333
19	16638432	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.416667
19	16638436	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.1
19	16638473	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16638474	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16638477	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.461538
19	16638526	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16638535	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.318182
19	16638568	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.25
19	16638574	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16640293	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.272727
19	16644186	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.125
19	16644259	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.125
11	16740482	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.416667
11	16740489	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.5
11	16740612	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.181818
11	16740669	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.142857
11	16740684	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.121212
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	1
11	16740839	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.12
11	16740941	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0869565
11	16740943	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.173913
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.35
X	16747980	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.272727
11	16756904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	17068351	A->G	-	ENSG00000131351	HAUS8	protein_coding	Intergenic	.	.	Alu	0.2
19	17081599	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17081672	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.333333
19	17081689	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.105263
19	17081729	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.08
19	17081734	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.291667
19	17084609	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.25
19	17084678	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.133333
19	17084758	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17084784	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.428571
19	17084790	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.111111
19	17092650	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17092682	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.125
19	17098759	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17098767	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.214286
19	17098855	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17099932	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17099936	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.3
19	17100350	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17100352	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.363636
19	17100369	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17100375	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.230769
19	17100430	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17100438	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17102699	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17102722	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17105296	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.117647
19	17105384	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.3
19	17105470	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.307692
19	17105477	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
11	17131487	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.117647
11	17131494	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.15
11	17131507	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.333333
11	17131519	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.416667
11	17141383	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.125
3	17248088	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.125
3	17248103	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.153846
3	17248113	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.181818
11	17285320	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.384615
11	17285364	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.461538
11	17285557	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17285694	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.25
11	17297828	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17297829	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.666667
11	17297896	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.222222
11	17297906	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.176471
11	17298032	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.117647
11	17298047	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0555556
11	17298061	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1
11	17298154	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	17298198	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	17298288	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.157895
11	17298325	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.173913
11	17298328	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.52381
11	17298360	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1875
11	17298375	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.470588
11	17298384	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.176471
11	17298402	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.25
11	17298418	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	17298453	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.15
11	17298461	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.5
11	17298464	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.157895
11	17298465	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17298493	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17298509	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.357143
11	17298523	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.307692
11	17303738	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17306833	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.157895
11	17336500	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0689655
11	17336633	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0857143
11	17336666	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	17336674	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.208333
11	17336675	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17337070	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17337082	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.7
11	17337176	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.333333
16	17456476	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.28125
16	17456487	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.321429
16	17456520	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.0952381
16	17456614	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	17464255	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.2
21	17599313	A->G	-	ENSG00000154640	BTG3	protein_coding	Intergenic	.	.	Alu	0.2
6	17645408	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.285714
6	17645432	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.25
6	17665931	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
20	17673443	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.176471
10	17687201	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.214286
10	17687219	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.833333
10	17687220	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.777778
10	17687252	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.117647
10	17687273	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.153846
10	17687279	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.363636
10	17687313	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.2
10	17687315	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.3
10	17687336	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.6
10	17687354	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.25
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.764706
10	17702846	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.111111
22	17756613	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.125
22	17756628	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.5
22	17756716	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.181818
6	17981522	A->G	-	ENSG00000137177	KIF13A	protein_coding	Intergenic	.	.	Alu	0.2
8	17997838	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.107143
8	17997839	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.12
8	17997913	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	17997915	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0857143
8	17997916	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0526316
8	17997942	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.05
8	17997999	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0816327
17	18022494	A->G	-	ENSG00000171953	ATPAF2	protein_coding	Intergenic	.	.	Alu	0.4
19	18272252	A->G	-	ENSG00000130518	IQCN	protein_coding	Intergenic	.	.	Alu	0.2
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.181818
X	18346011	A->G	-	ENSG00000102098	SCML2	protein_coding	Intergenic	.	.	Alu	0.25
19	18491221	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.181818
11	18512868	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.1875
11	18512905	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.214286
11	18512910	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.357143
11	18512929	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.266667
11	18512944	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18513007	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18520776	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18521429	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.193548
11	18521431	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.275862
11	18521466	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18521529	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.0869565
11	18521631	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.0625
11	18521737	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.111111
11	18521766	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.0833333
11	18521774	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.565217
11	18521872	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18521874	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18521944	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.384615
20	18616732	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.166667
20	18616751	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.166667
20	18659979	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.153846
20	18660067	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.916667
20	18660091	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.166667
20	18660372	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.25
10	18669979	A->G	+	ENSG00000165997	ARL5B	protein_coding	Intergenic	.	.	Alu	0.166667
16	18797229	A->G	+	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	1
16	18797242	A->G	+	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	1
19	18908681	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
19	18909579	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0769231
19	18909586	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.03125
19	18909587	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0461538
19	18909595	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.145161
19	18909608	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0746269
19	18909615	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.115385
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.222222
19	18909624	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0535714
19	18909630	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
19	18909651	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0566038
19	18909656	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.04
19	18909704	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0789474
19	18909729	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0689655
19	18909750	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18909786	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.333333
19	18909792	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.1
19	18912244	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.6
19	18914802	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.266667
19	18914849	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.545455
19	18914864	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.272727
19	18914901	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.117647
19	18914946	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18917541	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
Y	19015421	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.3
Y	19050526	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.181818
Y	19058378	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.272727
1	19204053	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.3
1	19214870	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.117647
1	19214874	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.125
1	19214906	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.166667
1	19215086	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.333333
1	19215090	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.3
1	19225526	A->G	+	ENSG00000127463	EMC1	protein_coding	Intergenic	.	.	Alu	0.545455
1	19225536	A->G	+	ENSG00000127463	EMC1	protein_coding	Intergenic	.	.	Alu	0.181818
1	19225633	A->G	+	ENSG00000127463	EMC1	protein_coding	Intergenic	.	.	Alu	0.2
9	19291489	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.727273
9	19291494	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.545455
9	19307202	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.133333
9	19307237	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.133333
9	19307244	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.1
9	19307248	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.352941
9	19307288	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.230769
9	19307656	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.2
9	19307691	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.153846
9	19315013	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.3
9	19315039	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.181818
9	19315040	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.636364
19	19329776	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.25
1	19334645	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
19	19431547	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.181818
22	19438705	A->G	-	ENSG00000100084	HIRA	protein_coding	Intergenic	.	.	Alu	0.0952381
22	19439283	A->G	-	ENSG00000100084	HIRA	protein_coding	Intergenic	.	.	Alu	0.117647
22	19439400	A->G	-	ENSG00000100084	HIRA	protein_coding	Intergenic	.	.	Alu	0.1875
22	19460822	A->G	-	ENSG00000070010	UFD1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	19460920	A->G	-	ENSG00000070010	UFD1	protein_coding	Intergenic	.	.	Alu	0.25
1	19472856	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.2
19	19473825	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.181818
13	19714580	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0789474
13	19714633	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0769231
13	19714635	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.08
13	19714691	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.307692
13	19714767	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19714774	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.181818
19	19729255	A->G	-	ENSG00000105708	ZNF14	protein_coding	Intergenic	.	.	Alu	0.272727
13	19744814	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.111111
13	19754335	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19765600	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19765610	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.272727
13	19765613	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.272727
13	19765616	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.363636
10	19766794	A->G	+	ENSG00000204740	MALRD1	protein_coding	Intergenic	.	.	Alu	0.7
10	19767344	A->G	+	ENSG00000204740	MALRD1	protein_coding	Intergenic	.	.	Alu	0.3
19	19816321	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
19	19816496	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
19	19816630	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
8	19825446	A->G	+	ENSG00000104613	INTS10	protein_coding	Intergenic	.	.	Alu	0.125
8	19825447	A->G	+	ENSG00000104613	INTS10	protein_coding	Intergenic	.	.	Alu	0.125
8	19825458	A->G	+	ENSG00000104613	INTS10	protein_coding	Intergenic	.	.	Alu	0.142857
10	19839131	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.142857
13	19847775	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.230769
10	19930843	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.3
3	19952093	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.1875
13	19985583	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.454545
13	19985596	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	19985745	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0869565
13	19985755	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19985916	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.153846
13	19985927	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.384615
13	19985936	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.166667
13	19985957	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.4
13	19986095	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.333333
13	19986847	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.172414
13	19986856	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.103448
13	19986889	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0740741
13	19986926	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0769231
13	19986947	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0555556
13	19986958	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.08
13	19986984	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0909091
13	19986985	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0645161
13	19986998	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0909091
13	19987011	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.15
13	19987046	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.4
13	19987050	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.454545
13	19987328	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19987749	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
2	20043248	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.0952381
13	20046457	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.15
13	20079066	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.3
13	20079225	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20292491	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20345135	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.133333
2	20345192	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20345286	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.461538
2	20345287	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.230769
2	20345333	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20345342	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.272727
9	20375813	A->G	-	ENSG00000171843	MLLT3	protein_coding	Intergenic	.	.	Alu	0.105263
22	20527807	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.230769
22	20527810	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.166667
6	20551914	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.2
6	20551938	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.454545
6	20551949	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.105263
6	20551950	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.105263
6	20551981	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.7
6	20552083	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.636364
6	20552084	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.769231
6	20552147	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.153846
6	20552191	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.111111
6	20552269	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.357143
6	20552277	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.230769
22	20561257	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20561333	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.153846
22	20562148	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
1	20647004	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.333333
1	20647008	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.117647
1	20647017	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.117647
1	20647040	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.272727
1	20647119	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20647260	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.1875
1	20647262	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.235294
1	20647303	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.111111
1	20647556	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.181818
1	20658941	A->G	-	ENSG00000244038	DDOST	protein_coding	Intergenic	.	.	Alu	0.181818
16	20687965	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0465116
16	20697923	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	20697939	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.166667
16	20697940	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.714286
16	20697983	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.466667
16	20698135	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.115385
16	20698139	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.208333
16	20698144	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0740741
16	20739753	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
1	20750938	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.3
1	20750956	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.285714
1	20751011	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.571429
1	20751012	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	20751106	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.444444
22	20753755	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.111111
22	20753779	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.1875
1	20758485	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20758547	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.3
1	20758567	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	20758618	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.230769
22	20759599	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.0714286
22	20759601	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.148148
1	20760090	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0769231
1	20760113	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0714286
1	20760115	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.153846
13	20837544	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.181818
13	20861953	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	20913921	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.272727
1	20913939	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.4
1	20913945	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
13	21003378	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.2
17	21041008	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.0465116
17	21041022	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.147059
17	21041023	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.0606061
6	21114061	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.25
6	21114065	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.272727
6	21114097	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.307692
6	21114189	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.166667
1	21130167	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.105263
1	21130192	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	21130301	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.214286
19	21146335	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.272727
1	21151367	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.0740741
1	21151376	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.0769231
1	21151377	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.142857
1	21151403	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.210526
1	21151505	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.129032
1	21151510	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.133333
1	21157587	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
1	21158236	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.347826
1	21158265	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.117647
1	21158273	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
1	21158297	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.304348
1	21158300	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.75
1	21158304	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.125
1	21158308	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.0869565
19	21315938	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.266667
19	21315958	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.363636
19	21316199	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.5
19	21316206	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.181818
19	21316216	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.166667
19	21316257	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.105263
19	21316262	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.666667
19	21316263	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.4
19	21316305	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.2
19	21316358	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.0740741
19	21322499	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
19	21406164	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.133333
13	21414426	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.111111
13	21414458	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.181818
13	21414499	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.117647
13	21414515	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.125
13	21414576	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.5
16	21424646	A->G	-	ENSG00000169246	NPIPB3	protein_coding	Intergenic	.	.	Alu	0.307692
16	21424655	A->G	-	ENSG00000169246	NPIPB3	protein_coding	Intergenic	.	.	Alu	0.266667
13	21426726	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.0526316
13	21426838	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.222222
13	21426874	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.178571
13	21426880	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.0769231
13	21432232	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.0869565
13	21432272	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.130435
13	21432415	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	1
13	21432458	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.117647
13	21432490	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.117647
13	21432494	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.111111
13	21432537	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.444444
13	21432538	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.277778
13	21432578	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.111111
13	21441459	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.1875
19	21445700	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.75
19	21445760	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.2
19	21445765	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.214286
14	21447475	A->G	-	ENSG00000100888	CHD8	protein_coding	Intergenic	.	.	Alu	0.133333
19	21459980	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.214286
19	21460057	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.153846
19	21460072	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.2
19	21460076	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.461538
19	21460079	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	21460315	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.214286
19	21462938	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.357143
19	21462945	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.266667
19	21463239	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.3
19	21463281	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.375
19	21463285	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.105263
13	21498503	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.111111
13	21498517	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.1875
13	21498574	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21498583	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.416667
10	21539825	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.2
13	21559636	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	21559649	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.470588
22	21572251	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.0952381
18	21590318	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.4
18	21590360	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.133333
18	21590423	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.8
18	21590425	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21590476	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.5
10	21660754	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.5
1	21685440	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.769231
1	21685475	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.75
1	21685479	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.25
1	21685503	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.5
1	21685516	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.411765
1	21685596	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.181818
22	21724450	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.272727
22	21724454	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.2
22	21724475	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.153846
22	21724478	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.181818
22	21724480	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21745874	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	21760895	A->G	-	ENSG00000197020	ZNF100	protein_coding	Intergenic	.	.	Alu	0.5
1	21770544	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.272727
1	21770578	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.2
1	21770603	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.230769
1	21770637	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.133333
1	21770640	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.166667
1	21770652	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.294118
1	21770653	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.117647
1	21770661	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.142857
1	21780839	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.214286
1	21780853	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.222222
1	21780906	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.25
1	21780977	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.307692
1	21781012	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.4
1	21781013	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.2
19	21812259	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.142857
19	21820962	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.0909091
19	21820971	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.0869565
19	21821033	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.214286
19	21821034	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.5
19	21821036	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.142857
19	21821093	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.0952381
19	21821248	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.0909091
19	21821284	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.142857
19	21821300	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.285714
19	21823608	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.136364
19	21823633	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.0869565
22	21834051	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	21834166	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.230769
22	21834168	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.384615
19	21835465	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.181818
19	21835522	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.352941
19	21835527	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.111111
19	21838406	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.111111
10	21843472	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.117647
22	21850222	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
X	21860137	A->G	+	ENSG00000012174	MBTPS2	protein_coding	Intergenic	.	.	Alu	0.142857
16	21860771	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.5
16	21860779	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.4
16	21860784	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.25
16	21860814	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.2
16	21860815	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.4
22	21863535	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.166667
22	21863546	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.333333
16	21864278	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.111111
16	21864322	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.153846
16	21873802	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.181818
3	21895451	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.307692
3	21895466	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.307692
10	21908984	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.428571
10	21909024	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.470588
10	21909051	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.125
10	21909130	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.5
10	21910138	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.133333
10	21910280	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.3
10	21949599	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.357143
10	21949611	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.1
10	21949643	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.133333
10	21956988	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.133333
10	21962560	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.0769231
10	21985335	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21985346	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.26087
10	21985355	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.0882353
10	21985361	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.0555556
10	21985378	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.177778
10	21985414	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.225806
10	21985422	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.0606061
10	21985425	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.0689655
10	21985427	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.107143
10	21985452	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.3125
10	21985453	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.1
10	21985476	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.1
10	21986797	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.08
10	21986943	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
3	22057620	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.307692
3	22057681	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.133333
3	22057687	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.166667
1	22062628	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.0882353
1	22062629	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.0967742
1	22073317	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.266667
1	22073350	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.105263
1	22073392	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.111111
1	22073418	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.114286
1	22073419	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.555556
1	22073428	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0645161
1	22073494	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0952381
6	22076557	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.15
1	22076877	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.181818
16	22396453	A->G	-	ENSG00000230872	MFSD13B	unitary_pseudogene	Intergenic	.	.	Alu	0.3
16	22413844	A->G	-	ENSG00000140743	CDR2	protein_coding	Intergenic	.	.	Alu	0.2
16	22413845	A->G	-	ENSG00000140743	CDR2	protein_coding	Intergenic	.	.	Alu	0.3
8	22449234	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22449364	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22449369	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.363636
8	22479597	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.181818
4	22512038	A->G	-	ENSG00000152990	ADGRA3	protein_coding	Intergenic	.	.	Alu	0.454545
4	22512039	A->G	-	ENSG00000152990	ADGRA3	protein_coding	Intergenic	.	.	Alu	0.4
8	22530645	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.166667
8	22530684	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22617012	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.153846
8	22617032	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	1
8	22617040	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.25
8	22617048	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.266667
8	22617076	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.235294
8	22617084	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.166667
8	22617093	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.8
8	22617094	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.4
8	22617102	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.105263
14	22908113	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.285714
14	22916311	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.333333
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.5
14	22916372	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.15
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.4
1	23037183	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	23037184	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	23037193	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.125
1	23037219	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.352941
1	23037236	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.35
1	23037245	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.52381
14	23074048	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.25
14	23082505	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.0740741
14	23082530	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.114286
14	23082573	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.09375
14	23082582	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.363636
14	23082583	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23082589	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.263158
14	23082605	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	23082633	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.105263
14	23082638	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.1
14	23082687	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.12
14	23082696	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.0869565
14	23082712	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.125
14	23082769	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.1875
14	23082772	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.125
14	23082802	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	23082854	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.357143
14	23082878	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	23104322	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.133333
19	23106096	A->G	+	ENSG00000183850	ZNF730	protein_coding	Intergenic	.	.	Alu	0.2
1	23130582	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	23152699	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.2
1	23152758	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	23152798	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	23154349	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.52381
1	23154417	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.139535
1	23154440	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.05
1	23154445	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	23154457	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0961538
1	23154458	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.12
1	23154464	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.840909
1	23154483	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0638298
1	23154487	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	23154490	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0454545
1	23154505	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.314286
1	23154525	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	1
1	23154533	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	1
1	23154572	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	23154573	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	23154755	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.08
1	23154783	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.4
1	23154788	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0925926
18	23158241	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.3
18	23161957	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.272727
18	23181375	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.266667
22	23195514	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.103448
22	23195519	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.0714286
22	23199836	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.5
22	23199967	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.5625
22	23199977	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.133333
22	23200009	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.4
22	23200029	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.230769
22	23200038	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.142857
22	23210296	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.230769
22	23210331	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.142857
18	23223324	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.8
18	23223325	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.4
18	23223330	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.2
18	23223413	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.307692
18	23223419	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.153846
18	23223421	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.133333
18	23223431	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.166667
18	23223447	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.125
22	23296291	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.277778
22	23296302	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.333333
22	23296331	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.375
1	23322298	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.05
1	23322304	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0588235
1	23322305	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0606061
1	23322364	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.105263
1	23322368	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0833333
1	23322374	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.103448
1	23322413	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.25
1	23322439	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.153846
1	23333999	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23334012	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.153846
1	23334160	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.166667
1	23334193	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.142857
1	23334313	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.117647
1	23334441	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0952381
13	23369750	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.125
13	23370130	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.181818
13	23370137	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.75
13	23370139	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.166667
7	23515358	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.184211
7	23515368	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0652174
7	23515394	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0869565
7	23515762	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.285714
7	23515764	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.466667
7	23518576	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.125
7	23518866	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.181818
7	23518891	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	23520837	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0625
7	23520857	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0526316
7	23520948	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.25
7	23520972	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.157895
2	23701581	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.9
2	23701626	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.583333
2	23701629	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.833333
2	23701630	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.25
22	23731632	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	23769781	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.458333
2	23769783	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.583333
2	23769788	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1
2	23769792	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1
2	23769801	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.318182
2	23769878	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1
2	23769879	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23769887	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
2	23769935	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.416667
2	23769957	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.235294
2	23779238	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.105263
2	23779273	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.117647
2	23779279	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1875
2	23779314	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.277778
2	23779316	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1875
2	23779447	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.176471
2	23779448	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.117647
2	23781537	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.666667
2	23781541	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.173913
2	23781565	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23781582	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
2	23781602	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.315789
2	23781603	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
2	23781629	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.214286
2	23781951	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	23781957	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.185185
2	23781981	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0588235
2	23782012	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.136364
2	23782044	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
2	23782089	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0571429
2	23782096	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0740741
3	23817218	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	23817233	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.189189
3	23817289	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.075
3	23832381	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.272727
3	23832684	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23832685	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.153846
3	23832954	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23832959	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23833807	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.35
3	23833811	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23833832	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.125
3	23833834	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.125
3	23833851	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.157895
2	23834300	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
2	23834361	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.227273
2	23834394	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1875
2	23834408	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.294118
2	23834429	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
2	23834434	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1875
2	23834450	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.176471
2	23845609	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.136364
2	23845672	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.484848
2	23845677	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.423077
2	23845708	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0789474
2	23845734	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.148148
2	23845744	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0666667
2	23845747	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	23845762	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.625
2	23845779	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
3	23846646	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	23854124	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.111111
3	23854147	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	23856968	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0588235
2	23857880	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.115385
2	23857948	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.133333
2	23858682	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
2	23862508	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
3	23869631	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23869700	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	23873142	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.166667
16	23873325	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
2	23899715	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23899861	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.111111
3	23953249	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.166667
3	23953253	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.181818
19	24055324	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24055344	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.363636
19	24055349	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.666667
19	24055396	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.333333
19	24055418	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24055420	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.125
19	24061820	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0833333
19	24061869	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0810811
19	24061882	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.148148
19	24061883	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.107143
19	24061919	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0540541
19	24061938	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.16129
19	24061965	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0571429
19	24069490	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24069498	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.5
19	24069511	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24069689	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	24069736	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0909091
19	24069772	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.571429
19	24069773	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.5
19	24069888	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.214286
X	24078192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0363636
X	24078223	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
19	24080895	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.153846
19	24080984	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.3
19	24082458	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	24082459	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.357143
2	24089855	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.4
2	24089864	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.142857
2	24089917	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.2
2	24089919	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.789474
19	24089935	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0769231
19	24089936	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0540541
19	24089961	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0810811
19	24090001	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.565217
19	24090002	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.695652
19	24090061	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.444444
19	24090078	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.470588
19	24090087	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.181818
19	24090091	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.391304
19	24090099	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.263158
2	24090103	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.363636
19	24090110	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.263158
19	24090113	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.238095
2	24090147	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.157895
19	24090163	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.222222
2	24090171	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.166667
2	24090327	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.230769
2	24090463	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.181818
2	24090507	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.166667
2	24092525	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.153846
14	24170886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
14	24170956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
14	24170976	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
14	24170977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.444444
14	24170979	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
14	24170988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	24171039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.555556
14	24171058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	24171078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
14	24212512	A->G	-	ENSG00000254505	CHMP4A	protein_coding	Intergenic	.	.	Alu	0.2
2	24337764	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	24346993	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	24347047	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	24347059	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.333333
2	24347066	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.117647
2	24347083	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.352941
2	24347092	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	24348286	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.416667
13	24453089	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
13	24453124	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
13	24476237	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
2	24514167	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.230769
2	24519611	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.230769
2	24523485	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.1875
2	24523495	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.1875
2	24523512	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.133333
2	24523518	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.133333
2	24523678	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.235294
2	24523805	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.105263
2	24523828	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.181818
2	24523871	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.181818
4	24531227	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.181818
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.272727
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.428571
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.153846
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.291667
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24574615	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.764706
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.117647
22	24574668	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.294118
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.176471
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.294118
22	24574681	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1875
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.294118
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.25
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.518519
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.205128
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.128205
22	24574817	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1
1	24760287	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.166667
1	24760316	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.25
1	24768755	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.2
1	24784883	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.272727
1	24784897	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.2
X	24793226	A->G	+	ENSG00000101868	POLA1	protein_coding	Intergenic	.	.	Alu	0.133333
X	24793227	A->G	+	ENSG00000101868	POLA1	protein_coding	Intergenic	.	.	Alu	0.2
X	24793229	A->G	+	ENSG00000101868	POLA1	protein_coding	Intergenic	.	.	Alu	0.166667
15	24980430	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	24980519	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intergenic	.	.	Alu	0.363636
15	24980564	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	24980570	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intergenic	.	.	Alu	0.1
15	24980574	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intergenic	.	.	Alu	0.294118
18	25121480	A->G	-	ENSG00000198795	ZNF521	protein_coding	Intergenic	.	.	Alu	0.4
4	25157641	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.0869565
4	25157673	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.5
4	25157677	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.333333
4	25157683	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.363636
4	25157817	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.111111
12	25219012	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.105263
12	25219067	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.153846
12	25219077	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.307692
8	25225585	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
8	25228998	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.363636
8	25229011	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
12	25231226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.192308
12	25231230	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.0338983
12	25231240	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.0655738
12	25231250	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.265306
12	25231314	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.5
12	25231324	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.207547
12	25231355	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.125
12	25231356	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.0740741
12	25231364	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.189189
8	25254514	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.166667
8	25254655	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0952381
8	25254681	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
13	25282698	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.125
13	25282743	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.130435
13	25282823	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.181818
13	25306282	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.210526
13	25306284	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.2
13	25306373	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0952381
1	25354427	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.25
1	25354431	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.583333
1	25354497	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.1
1	25354527	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.307692
20	25366349	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.3
15	25433348	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.238095
15	25433351	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	25433352	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.130435
15	25433354	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.125
15	25433358	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.380952
15	25433359	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.1
1	25437841	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25437870	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.363636
1	25438769	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.222222
1	25438819	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.363636
1	25438820	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.142857
1	25438874	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.157895
1	25440570	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
1	25451645	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.421053
1	25451651	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	25451707	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.105263
1	25451712	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
1	25451720	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	25451722	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	25451723	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.190476
1	25451731	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.130435
1	25451759	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.111111
1	25451785	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.125
1	25451838	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.4
1	25451920	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0606061
1	25453390	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.357143
1	25453409	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.133333
1	25453504	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.214286
1	25453516	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.230769
1	25453540	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.6
1	25453542	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.272727
1	25453583	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.363636
1	25453584	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.461538
1	25453647	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	25480811	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.428571
3	25661138	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0263158
3	25661245	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	25661249	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.09375
3	25661250	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.09375
15	25777663	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.125
1	25895214	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.333333
1	25895231	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.2
1	25895235	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.2
1	25895267	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.235294
1	25895301	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.272727
1	25895311	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.428571
1	25895378	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.181818
2	26041729	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.125
2	26269029	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.4
4	26358698	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.2
2	26362662	A->G	+	ENSG00000138018	SELENOI	protein_coding	Intergenic	.	.	Alu	1
12	26424794	A->G	-	ENSG00000123104	ITPR2	protein_coding	Intergenic	.	.	Alu	0.2
10	26443166	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.2
10	26443784	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.3
10	26443799	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.2
10	26476326	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.6
10	26543291	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.3
10	26543373	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.272727
10	26543387	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.4
1	26715951	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26715952	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26715987	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0909091
1	26716019	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0487805
1	26716029	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.243243
1	26716034	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0555556
1	26716045	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.121212
1	26716046	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0967742
1	26716059	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.133333
1	26716085	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0769231
1	26716091	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.08
1	26716095	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0909091
1	26716099	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.105263
1	26719873	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26719883	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.117647
1	26719904	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.111111
1	26719991	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.235294
1	26720006	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.111111
1	26720075	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26720089	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	26720100	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26720140	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26720144	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26736258	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26736375	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.2
1	26736508	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	26736679	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.111111
1	26736741	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.210526
1	26736742	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.105263
1	26736755	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26736781	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.133333
1	26736782	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.2
10	26772994	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.272727
10	26773370	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26773372	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.166667
10	26773375	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.166667
10	26773377	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.363636
10	26773427	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.153846
10	26851390	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26853677	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.214286
12	27039106	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.181818
12	27039343	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.214286
12	27039344	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.307692
12	27039353	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27039409	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.333333
12	27039432	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.5
12	27039482	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.285714
12	27039669	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.166667
12	27039780	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.645161
12	27039790	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.333333
12	27039817	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.125
12	27039897	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.142857
12	27039902	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.153846
10	27125733	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.125
10	27125779	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	27125789	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.333333
10	27125805	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.363636
10	27125808	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.214286
10	27125815	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.117647
10	27125818	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.176471
10	27125821	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.5
13	27141091	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.333333
13	27141092	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.25
13	27141121	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.15
13	27141127	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.190476
17	27302147	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.222222
17	27302153	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.36
2	27345810	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.2
2	27345916	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.105263
2	27345918	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.105263
2	27345919	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.210526
2	27345966	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.166667
2	27345988	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.176471
2	27346107	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.181818
2	27346164	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.25
2	27346172	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	27346195	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.176471
2	27346242	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.181818
2	27346243	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.25
2	27346266	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.454545
2	27346516	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.333333
2	27346519	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.333333
17	27483458	A->G	+	ENSG00000141068	KSR1	protein_coding	Intergenic	.	.	Alu	0.105263
1	27818105	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.142857
1	27818145	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.2
1	27878030	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.454545
1	27881708	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27890220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
22	27910222	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.133333
13	28028614	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.384615
13	28028855	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.7
13	28028874	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.769231
13	28028879	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.7
13	28028910	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28028914	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.0952381
13	28028920	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.5
13	28028959	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28028964	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.222222
13	28028995	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.45
13	28029049	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28084083	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.3
13	28146767	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28146828	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0869565
13	28146848	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28146854	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.135135
13	28146881	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0555556
13	28146895	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.12
13	28146896	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.192308
13	28146965	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28146969	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0810811
13	28150462	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4
13	28150463	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28150526	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.136364
13	28156845	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0465116
13	28156874	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0454545
13	28188521	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.355556
13	28188552	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.340426
13	28190528	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.52381
13	28193486	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.115385
13	28193487	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.222222
13	28193492	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.193548
13	28193495	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0769231
13	28193509	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0645161
13	28193513	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.206897
13	28193517	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0588235
13	28193522	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.210526
13	28193532	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28193558	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0612245
13	28193578	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0363636
13	28193581	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0545455
13	28193593	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0454545
13	28193596	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.146341
13	28193612	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.102564
13	28193622	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28193663	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28193684	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0540541
13	28193688	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.138889
13	28193695	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.05
13	28193937	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.266667
13	28193992	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28194010	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.130435
13	28194036	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.444444
13	28194037	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.481481
13	28194077	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0681818
13	28194078	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28194102	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0350877
13	28194114	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.03125
13	28198165	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28198207	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28198231	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28205569	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28205657	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.296296
13	28205678	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0689655
13	28205722	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.21875
13	28205736	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0645161
13	28205750	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.103448
13	28217326	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0666667
13	28217502	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0784314
13	28241253	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0769231
12	28241902	A->G	+	ENSG00000123106	CCDC91	protein_coding	Intergenic	.	.	Alu	0.2
12	28241948	A->G	+	ENSG00000123106	CCDC91	protein_coding	Intergenic	.	.	Alu	0.166667
13	28264277	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28264306	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28264332	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28264386	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28264389	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28264392	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28264418	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.75
13	28264419	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.285714
13	28264448	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28264460	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.666667
8	28369013	A->G	-	ENSG00000186918	ZNF395	protein_coding	Intergenic	.	.	Alu	0.166667
2	28411062	A->G	+	ENSG00000075426	FOSL2	protein_coding	Intergenic	.	.	Alu	0.136364
10	28538311	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0487805
10	28538319	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0888889
10	28538327	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.037037
10	28538362	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0645161
10	28538386	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0357143
10	28538404	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.031746
10	28538405	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0571429
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.666667
10	28538426	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0289855
10	28538431	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0735294
10	28538435	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.4
10	28538452	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.037037
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.209677
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.134328
10	28538493	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0350877
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.109375
10	28538502	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.05
10	28538532	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0714286
10	28538534	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.106061
10	28538634	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.025974
10	28538635	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0263158
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.111111
10	28538676	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.031746
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.234375
10	28538711	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.123077
10	28538712	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.031746
10	28538827	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0444444
17	28568185	A->G	-	ENSG00000087111	PIGS	protein_coding	Intergenic	.	.	Alu	0.166667
17	28667122	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.181818
17	28667125	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.3
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.8125
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.466667
1	28698864	A->G	+	ENSG00000162419	GMEB1	protein_coding	Intergenic	.	.	Alu	0.363636
17	28721990	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.25
17	28721991	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.416667
17	28722058	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.230769
17	28722100	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.217391
17	28722116	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.09375
17	28722209	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.0769231
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.258065
17	28722318	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.09375
17	28722320	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.129032
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.0967742
17	28722366	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.181818
17	28722397	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.416667
1	28753441	A->G	+	ENSG00000198492	YTHDF2	protein_coding	Intergenic	.	.	Alu	0.210526
2	28763948	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28764197	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0338983
2	28764268	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.130435
2	28764273	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0434783
2	28764326	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.37931
2	28764329	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28764340	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.171429
2	28764349	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.666667
2	28764435	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.137931
2	28764439	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0740741
2	28764742	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.214286
2	28764743	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28764814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.3
2	28764841	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28764846	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.333333
2	28764871	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.363636
2	28764876	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28770098	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28770197	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28772264	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0571429
17	28777940	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	1
2	28784733	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28784760	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0588235
2	28784799	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28784813	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0789474
2	28784814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.171429
2	28784841	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28784852	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.192308
2	28786582	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28786641	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.26
2	28786660	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.4
2	28792414	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0307692
2	28792466	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0365854
17	28797063	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.25
17	28797167	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.181818
17	28797173	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.25
17	28797174	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.166667
22	28798405	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.103448
22	28798453	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.037037
22	28798512	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0697674
22	28798536	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0638298
22	28798551	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.037037
22	28798848	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.107143
22	28798852	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0555556
16	28839642	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
16	28839667	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
16	28839751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
16	28839834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	28865899	A->G	-	ENSG00000171103	TRMT61B	protein_coding	Intergenic	.	.	Alu	0.2
1	28891827	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.333333
1	28891855	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.4375
1	28891856	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.142857
1	28891923	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.2
1	28891927	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.2
1	28891970	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.2
16	28912629	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.3
2	28939986	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.636364
2	28939996	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.142857
2	28940067	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.2
8	28952351	A->G	+	ENSG00000259196	HMBOX1-IT1	sense_intronic	Intergenic	.	.	Alu	0.5
16	28958188	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.363636
16	28958195	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	28958319	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	1
1	29173549	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.35
1	29173561	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	29173565	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.176471
1	29173574	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.55
1	29173587	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0952381
1	29173613	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.153846
1	29173626	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.142857
1	29173627	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.214286
1	29173628	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.214286
1	29173667	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.176471
1	29173704	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.117647
1	29177392	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0606061
1	29177419	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0408163
1	29177485	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0350877
1	29177486	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0333333
17	29281959	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
22	29286500	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.142857
22	29286501	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.454545
22	29286504	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.571429
22	29286506	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.142857
22	29286560	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.166667
22	29286662	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
12	29319021	A->G	-	ENSG00000064763	FAR2	protein_coding	Intergenic	.	.	Alu	0.133333
12	29319024	A->G	-	ENSG00000064763	FAR2	protein_coding	Intergenic	.	.	Alu	0.181818
12	29319026	A->G	-	ENSG00000064763	FAR2	protein_coding	Intergenic	.	.	Alu	0.153846
16	29391058	A->G	+	ENSG00000254206	NPIPB11	protein_coding	Intergenic	.	.	Alu	0.2
17	29403111	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intergenic	.	.	Alu	0.2
17	29403113	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intergenic	.	.	Alu	0.2
16	29410741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
16	29422726	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
16	29422731	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	29422734	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
16	29422746	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
16	29422770	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	29424226	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
16	29424232	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	29424240	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
16	29424241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	29427475	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intergenic	.	.	Alu	0.3
16	29556811	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	29584493	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
13	29588606	A->G	-	ENSG00000139514	SLC7A1	protein_coding	Intergenic	.	.	Alu	0.166667
13	29588642	A->G	-	ENSG00000139514	SLC7A1	protein_coding	Intergenic	.	.	Alu	0.166667
16	29600033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	29700914	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.3
17	29700918	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.363636
17	29741681	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.107143
17	29741691	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.0606061
17	29755773	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29755786	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29755800	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.363636
22	29832649	A->G	-	ENSG00000100325	ASCC2	protein_coding	Intergenic	.	.	Alu	0.117647
22	29833934	A->G	-	ENSG00000100325	ASCC2	protein_coding	Intergenic	.	.	Alu	0.117647
22	29833992	A->G	-	ENSG00000100325	ASCC2	protein_coding	Intergenic	.	.	Alu	0.181818
22	29945649	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.266667
22	29945657	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.142857
8	30099406	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	30099416	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	30101561	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	30101588	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	30167185	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.4
7	30316034	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.368421
7	30316039	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.578947
7	30316055	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.466667
7	30316102	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.272727
7	30316103	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.454545
7	30316168	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.357143
17	30486481	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.117647
14	30576971	A->G	+	ENSG00000092140	G2E3	protein_coding	Intergenic	.	.	Alu	0.181818
14	30576972	A->G	+	ENSG00000092140	G2E3	protein_coding	Intergenic	.	.	Alu	0.181818
7	30622846	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.142857
7	30622876	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.307692
7	30622937	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.166667
7	30623021	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.214286
17	30714032	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30714193	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
17	30720568	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	30720688	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
17	30727230	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
17	30727231	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
17	30740605	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	30740631	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.15
17	30761060	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
17	30761061	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0714286
17	30761096	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0740741
17	30761101	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0666667
17	30761106	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0645161
17	30761114	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0909091
17	30761115	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0606061
8	30811633	A->G	-	ENSG00000104695	PPP2CB	protein_coding	Intergenic	.	.	Alu	0.214286
8	30811634	A->G	-	ENSG00000104695	PPP2CB	protein_coding	Intergenic	.	.	Alu	0.357143
17	30815154	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.272727
17	30815223	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.153846
17	30815246	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.133333
17	30816552	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.181818
17	30816563	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.5
17	30816582	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.181818
17	30818733	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.4
17	30863077	A->G	+	ENSG00000176208	ATAD5	protein_coding	Intergenic	.	.	Alu	0.5
17	30863091	A->G	+	ENSG00000176208	ATAD5	protein_coding	Intergenic	.	.	Alu	0.5
1	30947972	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
1	30948002	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	30975212	A->G	+	ENSG00000181481	RNF135	protein_coding	Intergenic	.	.	Alu	0.166667
14	30980511	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.181818
14	30980545	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.2
14	30980601	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.133333
1	30997416	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	31015439	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	31015470	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.157895
1	31015480	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.411765
1	31015518	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.272727
1	31015544	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31015546	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	31015578	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.105263
1	31015583	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.190476
1	31015812	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.136364
14	31019972	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.375
14	31019995	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.333333
1	31025619	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.333333
1	31025623	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	31025667	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.238095
1	31025677	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	31025694	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	31025744	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.266667
1	31025759	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.333333
1	31025760	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.117647
1	31025823	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	31025829	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	31039121	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	31039271	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31042937	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.5
1	31043327	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31043343	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.363636
1	31048675	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.125
1	31048754	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
8	31049262	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	31049361	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.111111
8	31049451	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0740741
1	31052285	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.125
8	31070773	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.121212
8	31070790	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.153846
8	31070795	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.130435
8	31070825	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.1875
8	31070859	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.097561
8	31070860	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	31070861	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.333333
8	31070867	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	31070868	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0454545
8	31070885	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0487805
8	31070895	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.047619
8	31070899	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.512195
8	31070904	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.181818
8	31070925	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.1
8	31070926	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.433333
8	31075457	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.166667
8	31075478	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	31075496	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.16
8	31075599	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.2
8	31075621	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.1875
8	31075661	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0930233
16	31123362	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
17	31190169	A->G	+	ENSG00000196712	NF1	protein_coding	Intergenic	.	.	Alu	0.210526
17	31190178	A->G	+	ENSG00000196712	NF1	protein_coding	Intergenic	.	.	Alu	0.142857
17	31190209	A->G	+	ENSG00000196712	NF1	protein_coding	Intergenic	.	.	Alu	0.133333
17	31190212	A->G	+	ENSG00000196712	NF1	protein_coding	Intergenic	.	.	Alu	1
17	31285221	A->G	+	ENSG00000126861	OMG	protein_coding	Intergenic	.	.	Alu	0.7
17	31285223	A->G	+	ENSG00000126861	OMG	protein_coding	Intergenic	.	.	Alu	0.2
12	31305838	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.133333
12	31310945	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.133333
10	31348443	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.157895
10	31348444	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.210526
16	31452213	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.166667
16	31452223	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.25
11	31497534	A->G	-	ENSG00000148950	IMMP1L	protein_coding	Intergenic	.	.	Alu	0.181818
3	31542939	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.08
3	31542998	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.103448
3	31543011	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.0909091
20	31564492	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.2
20	31564902	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.0625
20	31564911	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.09375
20	31564978	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.105263
20	31565045	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.178571
20	31565055	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.208333
20	31565221	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.272727
20	31565250	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.4
20	31575102	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.166667
20	31575619	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.363636
20	31575695	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.176471
3	31631685	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.181818
22	31638714	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.230769
22	31638729	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.130435
22	31638733	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.153846
22	31638737	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.0714286
22	31638782	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.125
22	31638862	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.181818
22	31638910	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.291667
22	31638932	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.3
22	31638935	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.2
22	31638978	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	1
22	31639070	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.352941
22	31639090	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.25
22	31639100	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.0454545
22	31639105	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.361702
22	31639239	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.125
22	31640666	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.142857
22	31640673	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.153846
22	31640757	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.153846
22	31640758	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.153846
22	31640759	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.25
22	31640763	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.4
22	31641069	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.111111
22	31641100	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.111111
6	31752511	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.333333
6	31752538	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.5
6	31752599	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.4
6	31752635	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.2
2	31906065	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0571429
2	31906084	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.483871
2	31906105	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.151515
2	31906110	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.551724
2	31906149	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	31906150	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.384615
2	31906151	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.307692
2	31906171	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.538462
2	31906186	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	31906196	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.1
2	31906242	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.458333
1	31922752	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.366667
1	31922821	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.388889
1	31922888	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.25
1	31923215	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.272727
2	31930680	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	31930682	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	31930713	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	31930714	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	31930778	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	31930784	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.642857
2	31930792	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	31930852	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.214286
2	31930854	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	31990549	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.578947
2	31990559	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	31990627	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.28
2	31990628	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.56
2	31990679	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.1
2	31990702	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.133333
2	31994058	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	31994093	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.294118
2	31994098	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.368421
2	31994121	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.117647
2	31994136	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	31994138	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.173913
2	31994140	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	31994143	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	31994154	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	31994234	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.1875
2	31999478	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.3
2	31999618	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.5
2	31999639	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.636364
2	31999938	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.583333
2	31999988	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.5
2	31999992	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.130435
2	32000064	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0526316
2	32000067	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0789474
2	32000086	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	32000113	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.259259
2	32000153	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0540541
2	32000167	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.121212
2	32000257	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.222222
2	32000369	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.666667
2	32001150	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.111111
2	32001154	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.1
10	32012994	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.105263
10	32013013	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.0833333
10	32013039	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.1
10	32013040	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.105263
10	32013094	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.142857
10	32013133	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.142857
1	32016067	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.137931
1	32019482	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.16
1	32065228	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.166667
1	32065231	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.25
1	32065290	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.4
1	32065300	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.166667
1	32065736	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.133333
1	32065738	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.133333
20	32112573	A->G	+	ENSG00000101337	TM9SF4	protein_coding	Intergenic	.	.	Alu	0.272727
20	32112574	A->G	+	ENSG00000101337	TM9SF4	protein_coding	Intergenic	.	.	Alu	0.272727
14	32115545	A->G	+	ENSG00000100852	ARHGAP5	protein_coding	Intergenic	.	.	Alu	0.2
20	32117174	A->G	+	ENSG00000101337	TM9SF4	protein_coding	Intergenic	.	.	Alu	0.416667
1	32122850	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.181818
1	32138100	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.133333
1	32143328	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.9
17	32151762	A->G	+	ENSG00000126858	RHOT1	protein_coding	Intergenic	.	.	Alu	0.2
5	32152223	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0384615
5	32152283	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0512821
5	32152305	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0689655
5	32152306	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0689655
5	32152326	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.162791
5	32152351	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0681818
5	32152397	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.142857
5	32152398	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0857143
5	32152638	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1
5	32152682	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.277778
5	32152700	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0689655
17	32154213	A->G	+	ENSG00000126858	RHOT1	protein_coding	Intergenic	.	.	Alu	0.125
17	32154638	A->G	+	ENSG00000126858	RHOT1	protein_coding	Intergenic	.	.	Alu	0.2
5	32164532	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.35
5	32164558	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.333333
5	32164573	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.125
5	32164577	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.176471
5	32164601	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.55
5	32164681	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.3
5	32164929	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.153846
5	32164972	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0833333
5	32164978	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.08
5	32164996	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.153846
5	32164997	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.24
5	32165002	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.21875
5	32165032	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0588235
5	32165037	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.05
5	32165044	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0350877
5	32165048	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.528302
5	32165064	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0833333
5	32165093	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.147059
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.75
5	32165124	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.103448
5	32165181	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.3
1	32167919	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.2
2	32300327	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.384615
10	32300707	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	32300713	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.166667
1	32320175	A->G	+	ENSG00000116478	HDAC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	32336201	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	32336207	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.15
10	32351939	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.285714
10	32355677	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.0833333
10	32355682	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.173913
10	32355716	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.294118
10	32355722	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.352941
10	32357917	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.26087
10	32357920	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.142857
10	32357987	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.121212
10	32357992	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.4
10	32358037	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.1
10	32358048	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.296296
10	32358049	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.269231
10	32358119	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.142857
10	32358122	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.0909091
10	32358127	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.0909091
10	32364131	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.307692
10	32364152	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.25
10	32364260	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.333333
10	32364261	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.2
5	32370172	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
2	32371048	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.8125
2	32371053	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32371055	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0689655
2	32371092	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3125
2	32371145	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.304348
2	32371444	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32371455	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32371474	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32371475	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.214286
2	32371492	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.416667
2	32371514	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
1	32373802	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.181818
1	32373812	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.166667
20	32375103	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.25
20	32375286	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	32375287	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	32375289	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.1
20	32375406	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.1875
20	32382679	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.230769
1	32389135	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.181818
1	32389174	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.166667
17	32389700	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	32392199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
17	32392205	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
17	32392327	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	32392339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
17	32392345	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	32392488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
17	32392535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
17	32392536	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
17	32392601	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	32392607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	32394006	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	32394253	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
20	32407087	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.333333
20	32407113	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.142857
20	32407156	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.571429
5	32429058	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.25
17	32461217	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.6
17	32461450	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.4
17	32461451	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.454545
17	32461456	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.230769
17	32461464	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.454545
2	32462695	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.466667
2	32462701	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.266667
2	32462722	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
2	32462728	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.375
2	32462755	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
2	32462772	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32462778	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.533333
2	32462780	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.214286
2	32462795	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.111111
2	32462836	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.388889
2	32462845	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32462865	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
15	32468276	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
15	32468442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
13	32500961	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.2
13	32529850	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.0298507
13	32529854	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.0285714
3	32533985	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.545455
1	32547879	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.388889
1	32547905	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.103448
1	32547954	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.151515
1	32547986	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.0833333
1	32548012	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.15
1	32548013	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	32548039	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.142857
2	32553488	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
1	32554014	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.181818
1	32554077	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.25
2	32559787	A->G	+	ENSG00000279897	BIRC6-AS2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
1	32583132	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.3
1	32583214	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.117647
1	32583217	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.277778
1	32583218	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.277778
1	32583220	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.111111
1	32583274	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.1
1	32583330	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.214286
5	32588763	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.2
13	32597450	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.2
13	32597465	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.538462
13	32597684	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.181818
13	32597726	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.277778
13	32597767	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.125
13	32665336	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.142857
1	32676150	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.166667
1	32676395	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.133333
1	32676419	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.1
1	32676423	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.529412
1	32676489	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.384615
1	32676490	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.259259
1	32676516	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.111111
1	32676531	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.0714286
1	32676535	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.103448
1	32676561	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.0769231
12	32701789	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.227273
12	32701802	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.136364
12	32701808	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.136364
12	32701827	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.1
12	32701845	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.315789
12	32701853	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.25
12	32701893	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	32701894	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	32702024	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.5
12	32702056	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.0714286
12	32702057	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.5
12	32702058	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	1
12	32702091	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.133333
12	32702113	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.25
12	32702127	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.285714
1	32784033	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.133333
1	32785610	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.125
1	32785654	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.173913
1	32785715	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.204545
1	32785720	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.06
1	32785721	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.0392157
1	32785743	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.194444
1	32785747	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.0625
1	32785863	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.333333
1	32789946	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.125
1	32790021	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.181818
1	32790032	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.3
1	32790044	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.166667
1	32790085	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.111111
1	32790087	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.578947
1	32790088	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.6
1	32790129	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.421053
1	32802911	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.153846
1	32802945	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.190476
1	32802950	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.130435
1	32803115	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.526316
1	32803121	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.238095
1	32803174	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.133333
1	32803177	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.25
1	32803246	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.526316
1	32803250	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.136364
1	32822492	A->G	+	ENSG00000116497	S100PBP	protein_coding	Intergenic	.	.	Alu	0.2
1	32822526	A->G	+	ENSG00000116497	S100PBP	protein_coding	Intergenic	.	.	Alu	0.153846
1	33022452	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.6
9	33027791	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.176471
9	33027881	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.538462
9	33027928	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
7	33044031	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.181818
7	33045571	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.2
9	33059668	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.611111
9	33059702	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.142857
9	33059703	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.1875
9	33059743	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.176471
9	33059744	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.117647
21	33235805	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33240565	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33240566	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
9	33251266	A->G	-	ENSG00000107262	BAG1	protein_coding	Intergenic	.	.	Alu	0.125
9	33251279	A->G	-	ENSG00000107262	BAG1	protein_coding	Intergenic	.	.	Alu	0.133333
9	33251284	A->G	-	ENSG00000107262	BAG1	protein_coding	Intergenic	.	.	Alu	0.214286
11	33265653	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33265659	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0769231
11	33265693	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.12
11	33265698	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	33265831	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.217391
11	33265874	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33265877	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0714286
11	33265898	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	33265919	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0606061
11	33265925	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0625
11	33265933	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	33265934	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
11	33265990	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.208333
11	33266004	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.5
11	33268091	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	1
11	33268332	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	33268353	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	33268363	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33268399	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33268412	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.222222
11	33268470	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.103448
11	33268500	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	33268506	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0869565
11	33268516	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.238095
11	33270687	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.7
11	33270698	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	33270714	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	33270736	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33270760	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33273360	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33273398	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.368421
11	33279229	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	33279270	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.15
11	33282448	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33282467	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33282472	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
6	33307444	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.230769
6	33307462	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.111111
6	33307470	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.190476
6	33307530	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.157895
6	33307539	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.12
6	33307595	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.214286
6	33309696	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.428571
6	33309943	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.105263
9	33315771	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.2
9	33326614	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.2
11	33341980	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	33342004	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33342024	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33342063	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
21	33406282	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.3
3	33434377	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.318182
3	33434388	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.125
3	33434410	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	33434426	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	33434435	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.228571
3	33434436	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.121212
3	33434449	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.366667
3	33434462	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.107143
3	33434500	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.147059
3	33434503	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0625
3	33434505	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0857143
3	33434559	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.115385
3	33434560	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	33434851	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.08
3	33434890	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	33434891	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0625
3	33434951	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.185185
3	33434952	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	33434960	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.153846
21	33525493	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.636364
21	33526186	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.230769
21	33526198	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.153846
21	33526211	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.461538
21	33526228	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.266667
21	33526231	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.466667
21	33526308	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.416667
21	33526309	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.166667
21	33526311	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.166667
21	33526335	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.153846
21	33526375	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.166667
21	33526377	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.416667
21	33526453	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.277778
21	33526469	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.2
3	33548035	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.125
3	33548830	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.117647
9	33828168	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.5
9	33831180	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.111111
9	33832161	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.272727
9	33832188	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.266667
9	33863444	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.2
11	33877567	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.105263
11	33877589	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.105263
11	33877605	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.25
9	33990775	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.214286
9	33990777	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.642857
9	33990813	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.25
9	33990819	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.133333
9	33990910	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.181818
9	33993937	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.5
9	33994136	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.2
20	33998999	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.181818
20	33999003	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.181818
20	33999075	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.133333
20	34029252	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.142857
20	34029257	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.153846
20	34029310	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.125
20	34029316	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.285714
20	34029317	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.117647
11	34089104	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.3
20	34110007	A->G	+	ENSG00000125977	EIF2S2	protein_coding	Intergenic	.	.	Alu	0.133333
9	34183507	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	34183516	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
19	34188165	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.130435
19	34188179	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
9	34192239	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.25
19	34192425	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34192459	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	1
19	34192513	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.272727
19	34192737	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.647059
19	34192743	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.352941
19	34192755	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0869565
19	34192774	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.238095
19	34192793	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	1
19	34192832	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.269231
19	34192850	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.157895
19	34192858	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.722222
19	34192859	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.85
19	34192864	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.461538
19	34192885	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.32
19	34192907	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0714286
19	34192918	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.269231
19	34192920	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.12
19	34192928	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0714286
19	34192929	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.142857
19	34192931	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0645161
9	34193203	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
19	34202373	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.25
19	34203526	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34203614	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.133333
19	34203618	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34203683	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.423077
19	34203688	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.172414
19	34203692	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0769231
19	34204592	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.1
19	34205355	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0869565
19	34205366	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.103448
19	34205585	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0833333
9	34217984	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	34218003	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	34218042	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	34218141	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34221408	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	34223342	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	34228155	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
6	34353539	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.2
20	34364656	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.2
20	34364953	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0526316
20	34364980	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0571429
20	34364994	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0645161
20	34365085	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0625
20	34365102	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.117647
20	34365115	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0769231
20	34365185	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0740741
20	34366435	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.272727
20	34370059	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.09375
20	34370608	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.1875
20	34371005	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.230769
20	34371008	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.333333
20	34378284	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.190476
20	34378285	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.136364
20	34378351	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.115385
20	34378353	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0740741
20	34378354	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.16
20	34378386	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0571429
20	34378393	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0526316
20	34378394	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0555556
20	34378425	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.103448
20	34427469	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.272727
20	34427524	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.133333
20	34427536	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34431139	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34431151	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.25
20	34431266	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.166667
20	34431348	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.333333
20	34431784	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.09375
20	34431785	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34431807	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0967742
20	34431820	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.130435
20	34431838	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34431854	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.473684
20	34431897	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.242424
20	34431923	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.172414
20	34431924	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.206897
20	34432004	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.125
20	34436894	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.2
20	34437047	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.3
20	34451169	A->G	+	ENSG00000231795	ITCH-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
20	34451337	A->G	+	ENSG00000231795	ITCH-IT1	sense_intronic	Intergenic	.	.	Alu	0.3
14	34458407	A->G	-	ENSG00000165389	SPTSSA	protein_coding	Intergenic	.	.	Alu	0.25
20	34467408	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.125
20	34467422	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.333333
20	34468778	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.272727
20	34468779	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.166667
14	34537155	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.5
6	34808223	A->G	+	ENSG00000065060	UHRF1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
6	34808253	A->G	+	ENSG00000065060	UHRF1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
6	34808266	A->G	+	ENSG00000065060	UHRF1BP1	protein_coding	Intergenic	.	.	Alu	0.230769
6	34808267	A->G	+	ENSG00000065060	UHRF1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34814076	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
11	34814077	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
21	34853905	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.266667
21	34853945	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.230769
21	34853993	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.5
21	34854046	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.111111
14	34863085	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.133333
14	34863087	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.125
21	34863631	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0555556
21	34863640	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.125
21	34863692	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.135593
21	34863749	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.185185
21	34863755	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.351351
21	34876924	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0517241
21	34876949	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0454545
6	34885181	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.08
6	34886526	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.181818
15	34931017	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.2
15	34931041	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.181818
21	34948883	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.117647
21	34948884	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.176471
21	34948914	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.166667
21	34948959	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.142857
15	34950316	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.153846
15	34950339	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.153846
15	34950361	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.230769
15	34950367	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.2
21	34961955	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.285714
21	34962031	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.387097
21	34962041	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.129032
21	34962048	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0769231
21	34962053	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0714286
21	34962056	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.103448
21	34962057	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.15625
21	34962110	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0606061
21	34962117	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.142857
21	34962126	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.08
21	34962168	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.105263
21	34995579	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0689655
10	35011616	A->G	-	ENSG00000108094	CUL2	protein_coding	Intergenic	.	.	Alu	0.2
20	35029768	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.3
20	35029774	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.5
20	35029820	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35029841	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.68
20	35029865	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.5
20	35031315	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.153846
20	35032611	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.181818
20	35032640	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.2
20	35032641	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.2
20	35032744	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.181818
20	35032751	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.454545
9	35047173	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
9	35047205	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
9	35047210	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
9	35047250	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	35047267	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
9	35047271	A->G	-	.	.	.	Intergenic	.	.	Alu	0.36
9	35047277	A->G	-	.	.	.	Intergenic	.	.	Alu	0.608696
9	35047285	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	35047321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
9	35047335	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
9	35047336	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
9	35047343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.318182
9	35047345	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
9	35047563	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
9	35047595	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
9	35047598	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
9	35047599	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	35047600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
9	35047623	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	35047631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
9	35051992	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	35052003	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
18	35063738	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.2
18	35063739	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.357143
18	35063806	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.5
18	35063877	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.192308
18	35063905	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.47619
18	35063968	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.0606061
18	35064047	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.105263
18	35064088	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.0909091
18	35064126	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.166667
18	35064130	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.25
18	35064131	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.166667
17	35076088	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.52381
17	35076090	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.277778
17	35076132	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.0769231
17	35076170	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.16
17	35076217	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35076261	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.333333
17	35076286	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.142857
9	35087258	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
14	35098531	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
14	35115125	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.25
14	35115437	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.272727
14	35115441	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.357143
10	35411376	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.142857
10	35411434	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.233333
10	35411435	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.259259
10	35412660	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.3
20	35551200	A->G	+	ENSG00000125991	ERGIC3	protein_coding	Intergenic	.	.	Alu	0.2
11	35692736	A->G	+	ENSG00000166326	TRIM44	protein_coding	Intergenic	.	.	Alu	0.285714
17	35703151	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.25
20	35727865	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.214286
20	35727991	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35775501	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.0869565
20	35775502	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.25
20	35775572	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.666667
20	35775595	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.166667
20	35775603	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.142857
20	35775604	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.214286
20	35775633	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.538462
20	35775634	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.153846
20	35775674	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.285714
20	35775675	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.625
20	35793878	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.2
20	35803042	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.266667
20	35803099	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.166667
20	35803105	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.333333
20	35803131	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.117647
20	35803167	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.235294
1	35813664	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35813669	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	35813674	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3125
1	35813898	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
1	35813914	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.117647
1	35813928	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
7	35814816	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.125
7	35814854	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.111111
7	35814907	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.15
1	35816637	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	35816656	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.26087
1	35816727	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.307692
1	35819327	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.2
1	35819354	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.272727
1	35819510	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.117647
1	35819612	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.75
1	35819618	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35819654	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.266667
1	35819674	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
17	35827215	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.666667
17	35827221	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.285714
17	35827225	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.15
17	35827261	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.454545
17	35827495	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.125
17	35827518	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.263158
17	35827559	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.117647
17	35827585	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.263158
17	35827586	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.421053
17	35827662	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.171429
1	35829582	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.133333
1	35829587	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	1
1	35829728	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.1875
1	35829729	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.125
1	35829755	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35829761	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	35829769	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35829982	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
1	35829994	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.545455
1	35829995	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3
1	35830033	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.176471
1	35830070	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.117647
1	35830088	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.217391
1	35830089	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.0952381
1	35830714	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.2
1	35833025	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.5
1	35833026	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3
1	35833031	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3
1	35833093	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
1	35833103	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.5
1	35833136	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.363636
1	35833168	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.307692
1	35833181	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.416667
1	35833211	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
6	35837993	A->G	-	ENSG00000096063	SRPK1	protein_coding	Intergenic	.	.	Alu	0.4
20	35882843	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.2
20	35882881	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.142857
20	35882885	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.133333
20	35882907	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.368421
20	35882913	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.111111
7	35888548	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
7	35888618	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.214286
7	35888699	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
7	35888740	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.25
1	35933433	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.166667
1	35933452	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.111111
1	35933461	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	35958496	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.166667
1	35958540	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.2
1	35958546	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.153846
18	36003914	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.3
18	36003915	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.3
18	36003922	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.166667
18	36003937	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.181818
18	36019205	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.307692
18	36019246	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	1
18	36019272	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.2
18	36019297	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.133333
18	36019312	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	1
18	36019317	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	1
18	36019374	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.1875
18	36019379	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.941176
18	36019380	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.941176
18	36019402	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.466667
1	36022811	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.2
6	36036121	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36037868	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0606061
6	36039804	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.166667
6	36039876	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.166667
6	36045688	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0833333
9	36153043	A->G	+	ENSG00000122694	GLIPR2	protein_coding	Intergenic	.	.	Alu	0.272727
9	36246806	A->G	-	ENSG00000122705	CLTA	protein_coding	Intergenic	.	.	Alu	0.181818
1	36255428	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.272727
1	36255514	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36255519	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36265976	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
22	36375820	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.266667
22	36376160	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.0909091
9	36391746	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.666667
9	36391752	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.210526
21	36396455	A->G	+	ENSG00000159259	CHAF1B	protein_coding	Intergenic	.	.	Alu	0.416667
21	36396459	A->G	+	ENSG00000159259	CHAF1B	protein_coding	Intergenic	.	.	Alu	1
21	36396460	A->G	+	ENSG00000159259	CHAF1B	protein_coding	Intergenic	.	.	Alu	0.142857
21	36396633	A->G	+	ENSG00000159259	CHAF1B	protein_coding	Intergenic	.	.	Alu	0.142857
9	36416955	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.272727
6	36450259	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.25
6	36450332	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.0869565
6	36450341	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36450394	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.142857
9	36451365	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	36451665	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.15
9	36451679	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36458420	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.25
6	36458421	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.272727
6	36458618	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.111111
6	36458645	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.0909091
6	36458736	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.181818
9	36465429	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.363636
9	36465468	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	36465485	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.133333
9	36465538	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.166667
9	36465539	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.142857
9	36465552	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.230769
9	36465591	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.142857
9	36476592	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.181818
9	36476616	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.25
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0434783
1	36476785	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0241935
1	36476825	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0428571
1	36476832	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.027027
1	36476878	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0694444
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.176471
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.240964
1	36476959	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0568182
1	36476961	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0561798
7	36478293	A->G	-	ENSG00000237400	AC006960.2	antisense	Intergenic	.	.	Alu	0.181818
9	36480649	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0689655
9	36480689	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0833333
9	36480690	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0909091
9	36480729	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0952381
9	36480801	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0869565
9	36480817	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0909091
9	36480822	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.0869565
9	36480823	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.166667
9	36482229	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	36482230	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.181818
9	36482246	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.214286
9	36482248	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.285714
9	36482257	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.4375
6	36498690	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36541894	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.133333
6	36541960	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.142857
17	36548494	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	36548495	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.214286
17	36548500	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	36559038	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36559101	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	36559135	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36559247	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.125
17	36562711	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.136364
17	36562712	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	36562739	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.08
17	36562742	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.333333
17	36562749	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.484848
17	36562750	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.121212
17	36562789	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0769231
17	36562794	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0645161
17	36562815	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
17	36562818	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.259259
17	36562822	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.206897
17	36562850	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.08
17	36562854	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	36562891	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.5
17	36563119	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.157895
17	36563145	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36563146	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.190476
17	36563155	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	36563168	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36575972	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36576067	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	36576479	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.25
20	36578157	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0909091
20	36578158	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.318182
20	36578188	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.285714
20	36578210	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578211	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578235	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36578236	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.428571
20	36578263	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36578271	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.148148
20	36578293	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.571429
20	36578294	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.272727
20	36578325	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36578328	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.5
20	36578348	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.454545
20	36578362	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36580550	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36580570	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.428571
20	36580630	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.285714
20	36580683	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.08
20	36580689	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36583541	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0689655
20	36583777	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.125
20	36583832	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.08
20	36583838	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0645161
20	36583847	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0909091
20	36583940	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.102564
20	36583956	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.09375
20	36585366	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.105263
20	36585378	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.08
20	36585414	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.133333
7	36741509	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	36741524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
7	36741541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
7	36741631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
19	36809196	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.615385
19	36809210	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.285714
19	36809213	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.266667
19	36809237	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.181818
19	36809252	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.272727
19	36809261	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.153846
19	36809262	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.153846
19	36809316	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	1
19	36809322	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.166667
19	36809326	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	1
19	36809352	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.133333
19	36809358	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.181818
19	36828617	A->G	+	ENSG00000197863	ZNF790	protein_coding	Intergenic	.	.	Alu	0.538462
19	36828623	A->G	+	ENSG00000197863	ZNF790	protein_coding	Intergenic	.	.	Alu	0.142857
19	36828697	A->G	+	ENSG00000197863	ZNF790	protein_coding	Intergenic	.	.	Alu	0.2
19	36828761	A->G	+	ENSG00000197863	ZNF790	protein_coding	Intergenic	.	.	Alu	0.2
2	36890622	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.363636
7	36953098	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.142857
5	36968659	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.466667
5	36968660	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.133333
5	36968665	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.1875
5	36968675	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.416667
5	36968683	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.142857
20	37033750	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	37034015	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	37034017	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.6
7	37080500	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.157895
7	37080505	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.108108
7	37080535	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.162162
7	37080553	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0869565
7	37080566	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0689655
7	37080576	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.5
20	37085271	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.5
3	37098455	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.125
3	37098484	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.3125
3	37098485	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.294118
3	37098513	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	37098527	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.0909091
3	37102551	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	37102595	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.6
3	37102596	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.571429
3	37104879	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.214286
2	37115169	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.181818
2	37115186	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.181818
2	37115335	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.181818
9	37131525	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.133333
9	37161520	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.384615
9	37161524	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.416667
9	37161525	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.25
9	37164347	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.222222
9	37164354	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.105263
9	37164402	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.529412
9	37164618	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.05
9	37164635	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	1
9	37164643	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	1
7	37179415	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.3
7	37200112	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0625
7	37200134	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0740741
7	37200146	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.176471
7	37200147	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.212121
7	37200182	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0833333
7	37200185	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.393939
7	37200189	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.09375
7	37200206	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.30303
7	37200212	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.68
7	37200300	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.5
7	37200308	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.3125
7	37200318	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.315789
7	37200353	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0869565
7	37200356	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.434783
5	37215899	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.136364
5	37215928	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.263158
5	37215929	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.555556
5	37215930	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.625
5	37215939	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.181818
5	37215960	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.368421
5	37215970	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.117647
5	37215996	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.363636
5	37216030	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.4
5	37216040	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.307692
5	37216055	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.642857
5	37216056	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.142857
5	37216109	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.222222
5	37216116	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.571429
5	37225058	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.2
5	37235639	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.166667
5	37235701	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.238095
5	37235711	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.111111
5	37235773	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.3
5	37235942	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.142857
5	37235966	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.142857
5	37235980	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.2
5	37238281	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.3
5	37238332	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.153846
5	37238337	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.307692
5	37238591	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.307692
5	37238640	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.3125
5	37238697	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.2
5	37238700	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.2
5	37238702	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.25
5	37238703	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.166667
3	37256398	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	37256420	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.25
3	37260344	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	37260379	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.125
3	37260412	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.272727
3	37260470	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.416667
3	37260493	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.4
3	37260516	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	37260538	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.272727
3	37260587	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.25
3	37260588	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.125
3	37260593	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.125
3	37262379	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0555556
3	37262386	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.047619
3	37262431	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0454545
3	37265782	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.571429
3	37265783	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.538462
3	37265838	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0869565
3	37265906	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.6
3	37265946	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.4
3	37274003	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.111111
3	37274450	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.263158
3	37274573	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.181818
19	37328183	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.375
19	37328227	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	37328229	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.105263
21	37410673	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.08
21	37410941	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.26087
21	37411102	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.37931
21	37411103	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.333333
21	37411233	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	1
21	37411236	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.148148
21	37411262	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0689655
21	37411277	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.12
21	37411281	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0571429
21	37411297	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.269231
21	37426647	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.115385
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.78125
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.625
21	37427135	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0882353
21	37427161	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0588235
21	37427238	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.1
21	37427241	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.344828
21	37427245	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.875
21	37427257	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.358974
21	37427385	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0666667
21	37427386	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.108108
9	37462649	A->G	-	ENSG00000168795	ZBTB5	protein_coding	Intergenic	.	.	Alu	0.2
21	37467277	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.166667
21	37467279	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.142857
4	37596944	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.2
4	37596985	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.142857
4	37607708	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.153846
4	37618284	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.107143
4	37618871	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.028169
4	37618883	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0373832
4	37618942	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.103448
4	37618952	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.08
4	37619080	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.111111
4	37619098	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0869565
4	37619125	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.142857
17	37634006	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.2
17	37634077	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.25
17	37634082	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.2
17	37634152	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.142857
4	37673358	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.0540541
4	37681693	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.181818
6	37829281	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	37829311	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.130435
6	37829371	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	37829415	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0909091
6	37829416	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.136364
6	37829425	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	37829433	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.272727
6	37833679	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.346154
6	37833747	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.333333
22	37857107	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.166667
22	37857112	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.153846
22	37857174	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.133333
22	37857176	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.285714
22	37857182	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37857183	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37857243	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.166667
22	37857249	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.538462
22	37867803	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37867907	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.3
22	37867912	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.2
6	37870178	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.24
6	37870188	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.363636
6	37870234	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0740741
6	37870386	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0810811
6	37870520	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.285714
6	37870549	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.103448
6	37870581	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.333333
6	37870732	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.666667
6	37870753	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37870797	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	37874394	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.125
6	37884414	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
8	37889069	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
8	37893278	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.3
6	37976383	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	37976386	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.294118
6	37976463	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.333333
6	37976504	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	1
6	37976512	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.105263
6	37976513	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.1
6	37976529	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.105263
10	38022402	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.2
10	38022408	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.115385
10	38022418	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.16
10	38022448	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.454545
10	38022473	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.12
10	38022492	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.294118
10	38022495	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.333333
10	38022504	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.263158
10	38022550	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.368421
10	38022569	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.1
10	38024080	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.25
10	38024091	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.363636
19	38120398	A->G	+	ENSG00000105738	SIPA1L3	protein_coding	Intergenic	.	.	Alu	0.166667
8	38216904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
8	38217064	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38217103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38219756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
8	38219760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.818182
8	38219807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38219811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
8	38219820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38219824	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
8	38219825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
8	38219830	A->G	+	.	.	.	Intergenic	.	.	Alu	0.866667
8	38219844	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
8	38239140	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.153846
8	38239141	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.153846
8	38239148	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38239227	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.2
8	38239228	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38239235	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38239240	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.176471
8	38239289	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.1
8	38239349	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.1875
8	38239438	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0967742
8	38239439	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0625
8	38239447	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0540541
8	38239474	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.129032
8	38239477	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0714286
8	38239498	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.125
8	38239500	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0666667
8	38239524	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0645161
8	38239540	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.322581
8	38239544	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.222222
8	38239566	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	1
8	38239572	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.136364
8	38239576	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	1
8	38239984	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38239985	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38239997	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.176471
2	38334115	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.190476
2	38334167	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.25
2	38334168	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.210526
2	38334194	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.266667
2	38334207	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.166667
2	38334208	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.105263
2	38334212	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.117647
2	38334275	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.181818
2	38334289	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.416667
2	38334302	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38448404	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.454545
8	38448447	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.133333
21	38462067	A->G	-	ENSG00000157554	ERG	protein_coding	Intergenic	.	.	Alu	0.05
8	38462644	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.3
8	38462649	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	38462683	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.105263
8	38462715	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.0625
8	38462721	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.4
8	38462741	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.285714
8	38462768	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.25
8	38462786	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.105263
8	38462797	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.4
8	38462798	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.133333
6	38465906	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.7
6	38563893	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.153846
6	38563910	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.176471
6	38563914	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.166667
6	38563920	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	1
22	38695545	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.210526
22	38695646	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.375
7	38701485	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8
7	38701486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
22	38711696	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.153846
22	38711722	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
22	38711723	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.388889
22	38711736	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.153846
22	38744349	A->G	+	ENSG00000100242	SUN2	protein_coding	Intergenic	.	.	Alu	0.2
20	38809801	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0322581
20	38809819	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0338983
20	38809870	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0238095
8	38815926	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.125
20	38817308	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.214286
20	38817329	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.133333
20	38817330	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.117647
20	38817361	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.08
20	38817362	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.16
20	38817372	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0967742
20	38817377	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.666667
20	38817471	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0350877
20	38817472	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.05
20	38817480	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0769231
8	38817848	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	38817950	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.235294
20	38817964	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.133333
20	38818026	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.136364
20	38818985	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38841298	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.037037
20	38841424	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0638298
20	38841430	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.03125
20	38841434	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0537634
20	38841529	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0263158
19	38844936	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.117647
19	38844941	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0857143
19	38844946	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0789474
19	38844958	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.275862
19	38844997	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.44
19	38844999	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.142857
20	38850923	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.142857
20	38851305	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0833333
20	38851306	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0833333
20	38851345	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0769231
20	38851759	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38851812	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.117647
20	38851912	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.111111
20	38851952	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.113636
20	38851953	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0666667
20	38851977	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.136364
20	38884800	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.347826
20	38884810	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.24
20	38884817	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
20	38884855	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38884884	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.153846
20	38884921	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38885019	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.176471
20	38885086	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.08
20	38885090	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.185185
20	38912549	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38912555	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.142857
20	38912571	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.153846
8	38913313	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.272727
20	38924018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
20	38924057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
20	38924062	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
20	38924091	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
20	38924103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
20	38924113	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
20	38924127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
8	38940278	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.416667
8	38940279	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.166667
5	38985833	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.133333
1	39030298	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.142857
1	39030312	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.214286
1	39030584	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.352941
1	39030592	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.1
1	39030982	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.285714
1	39030987	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.133333
2	39042608	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	39042637	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.153846
1	39043882	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	39043883	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	39043885	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	39044004	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
1	39044005	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
1	39044187	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
1	39044299	A->G	+	.	.	.	Intergenic	.	.	Alu	1
1	39044305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
1	39044306	A->G	+	.	.	.	Intergenic	.	.	Alu	1
1	39044372	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
1	39044396	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
1	39044399	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
5	39050469	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.181818
5	39050608	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.166667
2	39054066	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.117647
3	39058977	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.08
3	39058996	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.172414
3	39059024	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0645161
3	39059025	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.15625
2	39097593	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.1
2	39097633	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.178571
2	39097643	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.214286
2	39097702	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39111734	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	39111764	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39111765	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	39111768	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0810811
2	39111797	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.111111
2	39111798	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	39111868	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.263158
2	39111888	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.266667
2	39111933	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39111954	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.117647
2	39111957	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39112430	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	39112436	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
2	39112442	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.105263
2	39113305	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.285714
2	39113315	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39113329	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.294118
2	39113397	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39113406	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.277778
2	39114801	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.142857
2	39115553	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.272727
2	39115563	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	39115636	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39115637	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39115646	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.142857
2	39115664	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.176471
2	39115697	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.266667
14	39178818	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.105263
14	39178837	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.133333
14	39178838	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.210526
14	39178865	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.153846
14	39178868	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.142857
21	39243566	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.2
17	39286980	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.272727
17	39288589	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.2
21	39302013	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.2
19	39334084	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.2
19	39334155	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.2
19	39334181	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.2
19	39358417	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.166667
19	39358418	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.142857
19	39358426	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.142857
19	39358432	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.153846
19	39358449	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.307692
19	39358452	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.25
17	39387353	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.533333
17	39387358	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.166667
17	39387408	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.15
17	39387417	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.1
17	39387444	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.190476
17	39387667	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.166667
17	39387670	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.142857
17	39387709	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.2
17	39394482	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.3
17	39394506	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.153846
17	39394519	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.125
17	39394597	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.181818
17	39394689	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.466667
17	39394712	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.153846
3	39409005	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.25
3	39409006	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.2
3	39409026	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.142857
3	39409037	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.25
17	39504630	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.2
4	39724367	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	39724491	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.3
4	39724712	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.5
4	39725131	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.16
4	39725148	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.26087
4	39725152	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.761905
4	39725156	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.291667
4	39725172	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.1
4	39725175	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.111111
4	39725220	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0869565
4	39725227	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.153846
4	39725230	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.137931
4	39725236	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39725237	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.1
4	39725276	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.105263
4	39725319	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39725327	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.25
4	39725333	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.363636
4	39725800	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.5
4	39742987	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.153846
4	39742995	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.133333
4	39748538	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.433333
4	39748542	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0967742
4	39758453	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.153846
4	39758471	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39758491	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39758492	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39758599	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39758626	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	39759912	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.333333
4	39759921	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.4
4	39759927	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.238095
4	39759942	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.333333
4	39760033	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.133333
4	39768177	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.176471
4	39768189	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.142857
4	39768260	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0689655
4	39768311	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.333333
4	39768353	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0869565
4	39768355	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0869565
4	39768396	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0952381
4	39768591	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	39768617	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.142857
4	39768634	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39772302	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.6
4	39772490	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.7
4	39772514	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.357143
4	39772516	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.357143
4	39774183	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.333333
4	39774193	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.307692
4	39774254	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	39774258	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39836946	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.5
4	39872237	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39872301	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.25
4	39895856	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.25
4	39896126	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.285714
4	39896127	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.333333
4	39896187	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.133333
4	39896207	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.230769
4	39896269	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.148148
4	39896273	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.0769231
4	39896318	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.157895
4	39896325	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.111111
4	39896574	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.722222
4	39896595	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39896617	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39952866	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.4
4	39970863	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.105263
4	39970869	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.0952381
4	39970923	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
22	40048337	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.111111
22	40048338	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.111111
22	40048355	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0869565
22	40048361	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0909091
22	40048378	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0526316
22	40048383	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0512821
22	40048386	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0454545
22	40048394	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.04
22	40048420	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0392157
22	40048426	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0444444
22	40048430	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.3
22	40048437	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.186047
22	40048482	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0857143
22	40054947	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.142857
22	40056584	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.142857
22	40056723	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40072626	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40072644	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.173913
22	40072725	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0857143
22	40072743	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0425532
22	40072757	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0731707
22	40072785	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0625
22	40072814	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0689655
22	40074187	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0689655
4	40090704	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.272727
22	40098266	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.111111
22	40098307	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.25
22	40099171	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.5
22	40130693	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.363636
22	40133849	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0714286
22	40133850	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.107143
22	40133891	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40133895	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.148148
22	40144528	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40144554	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.368421
22	40144560	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.111111
22	40144564	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.133333
22	40144581	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.266667
22	40144607	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.230769
22	40145131	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.1
22	40145187	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40151151	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.235294
22	40151206	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40163243	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.272727
22	40163267	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40166774	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.117647
22	40166796	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.125
1	40185022	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.181818
1	40185391	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.2
1	40185392	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.3
1	40185901	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.147059
1	40185902	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.117647
1	40185923	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.151515
1	40214789	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.461538
1	40214843	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.181818
1	40215612	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.142857
4	40219290	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.111111
4	40219291	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.115385
4	40219318	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.125
4	40226379	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.153846
4	40226438	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.2
4	40226451	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.1875
4	40229374	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.133333
4	40229380	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.125
4	40229387	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.375
4	40229389	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.133333
4	40229397	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.4
4	40229471	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.153846
4	40229475	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.117647
4	40229523	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.142857
4	40229554	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.111111
4	40229586	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.235294
4	40235705	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.47619
19	40276451	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.181818
19	40276462	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.2
19	40276503	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.347826
19	40276506	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.363636
19	40276530	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.105263
19	40276560	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.166667
19	40276569	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.333333
19	40276585	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.266667
19	40276637	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.230769
19	40276643	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.583333
19	40276645	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.363636
22	40531191	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.125
22	40610175	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.142857
22	40610185	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.315789
22	40610214	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.105263
22	40610216	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.136364
22	40610251	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.266667
22	40610321	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.166667
22	40615752	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.166667
22	40615757	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.142857
22	40620096	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.166667
22	40620155	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.214286
22	40620327	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.3
22	40620328	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.2
22	40620356	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40652416	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0526316
13	40652441	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0714286
13	40652510	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.352941
13	40652511	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.333333
13	40657381	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	40657461	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40657471	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40657535	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.173913
13	40657554	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.176471
13	40657561	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40657576	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.2
13	40657584	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.125
13	40657585	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40657606	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40657607	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.208333
13	40661338	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.4
15	40691565	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
15	40693734	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.545455
15	40693735	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
1	40707741	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.181818
1	40707783	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.333333
1	40707784	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.181818
22	40886570	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	Intergenic	.	.	Alu	0.636364
22	40886571	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	Intergenic	.	.	Alu	0.7
22	40957964	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.3
15	40986401	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.2
15	40986410	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.538462
15	40986453	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.357143
15	40986495	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.153846
15	40986498	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.153846
13	40997325	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	40997375	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0714286
13	40997386	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	40997425	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0465116
13	40997428	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0526316
13	40997434	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0571429
13	40997451	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.216216
13	40997493	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40997625	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	41000455	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0333333
15	41007320	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.3
13	41012623	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	41012757	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.103448
13	41012782	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	41012785	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.107143
13	41012813	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
13	41012844	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
15	41037860	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.181818
15	41037929	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.466667
15	41038072	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.133333
15	41038077	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.2
15	41038080	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.285714
15	41038117	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.111111
15	41038152	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.347826
15	41038175	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.307692
15	41038179	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.333333
15	41038195	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.181818
15	41038260	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.142857
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.285714
20	41040709	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0384615
20	41040748	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0327869
20	41041214	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.186441
20	41041216	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.114754
20	41041290	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.148148
20	41041291	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0246914
20	41041297	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.043956
20	41041298	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0568182
20	41041299	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0941176
20	41041300	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0340909
20	41041303	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0357143
20	41041308	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0561798
20	41041311	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0227273
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.216495
20	41041329	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0215054
20	41041339	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0294118
20	41041356	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105769
15	41041363	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.2
15	41041364	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.181818
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
20	41041375	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.040404
20	41042008	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41042009	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
20	41042013	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41042048	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41042050	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41042090	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41042162	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41044225	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.111111
13	41052096	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	41052104	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.3
13	41057249	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41057273	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
15	41071627	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.230769
20	41086068	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1
20	41086101	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.125
20	41086116	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
15	41101026	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.2
22	41105275	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.333333
22	41137250	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.0909091
X	41199028	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.0526316
X	41199037	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.0606061
X	41199073	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.09375
X	41199077	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.5625
X	41199172	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.0689655
3	41215123	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0337079
3	41215264	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0223881
3	41215333	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.025
1	41234603	A->G	-	ENSG00000010803	SCMH1	protein_coding	Intergenic	.	.	Alu	0.166667
1	41234604	A->G	-	ENSG00000010803	SCMH1	protein_coding	Intergenic	.	.	Alu	0.166667
1	41234613	A->G	-	ENSG00000010803	SCMH1	protein_coding	Intergenic	.	.	Alu	0.3
1	41234746	A->G	-	ENSG00000010803	SCMH1	protein_coding	Intergenic	.	.	Alu	0.363636
1	41234747	A->G	-	ENSG00000010803	SCMH1	protein_coding	Intergenic	.	.	Alu	0.5
22	41258740	A->G	-	ENSG00000100401	RANGAP1	protein_coding	Intergenic	.	.	Alu	0.117647
22	41258751	A->G	-	ENSG00000100401	RANGAP1	protein_coding	Intergenic	.	.	Alu	0.142857
19	41266180	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.153846
19	41266493	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.333333
15	41418689	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.142857
15	41418690	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.133333
15	41424772	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.181818
15	41424866	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.3
15	41424867	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.2
15	41437440	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.2
15	41443880	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.181818
22	41483577	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.2
22	41483578	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.181818
20	41609933	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.157895
20	41609955	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.137931
20	41609989	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.21875
20	41609994	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.821429
20	41609995	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.62963
20	41610021	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.138889
20	41610036	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.157895
20	41610051	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.189189
20	41610052	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.0555556
20	41610099	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.53125
20	41610122	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.25
20	41610123	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.0740741
20	41610128	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.103448
22	41627488	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.230769
22	41627555	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.166667
22	41633006	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
22	41637870	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.0952381
22	41638575	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.230769
22	41638598	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.133333
22	41675625	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.117647
22	41675694	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.117647
22	41675695	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.25
17	41750762	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
17	41762368	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.181818
17	41774445	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.352941
17	41774462	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.15
17	41774466	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.1
17	41774472	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.157895
17	41774552	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.133333
15	41803293	A->G	+	ENSG00000137802	MAPKBP1	protein_coding	Intergenic	.	.	Alu	0.142857
22	41851769	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.3
22	41851954	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.133333
22	41851960	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.133333
22	41851987	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.2
22	41852000	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.142857
22	41852027	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.111111
22	41852041	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41852066	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.2
22	41852116	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.142857
22	41856969	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.166667
22	41858882	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.3
22	41859003	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41860623	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41895998	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.3
22	41896026	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41930762	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
17	41964712	A->G	-	ENSG00000204815	TTC25	protein_coding	Intergenic	.	.	Alu	0.0666667
17	41986254	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
4	41992191	A->G	+	ENSG00000014824	SLC30A9	protein_coding	Intergenic	.	.	Alu	0.235294
8	41995902	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.230769
17	42004052	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.25
17	42004058	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.0869565
17	42004093	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.285714
17	42005817	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
3	42018866	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.166667
3	42018869	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.285714
3	42018877	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.181818
3	42019001	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0967742
3	42019002	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	42019018	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.166667
3	42019043	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.111111
3	42019072	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.269231
3	42023037	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.266667
8	42031795	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0869565
8	42033102	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.25
6	42034683	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.7
8	42044197	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.133333
8	42044212	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0952381
8	42044287	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.230769
3	42075218	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.6
3	42075293	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42205568	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.307692
17	42277848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	42277852	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	42277920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	42277923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	42277926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	42277929	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	42277931	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	42281165	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.818182
2	42281190	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.125
2	42281231	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.4
17	42294095	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.333333
17	42294096	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.333333
1	42301288	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.210526
1	42301301	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.185185
1	42301302	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	42301307	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	42301333	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.482759
1	42301334	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.16
1	42301360	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.173913
1	42301389	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.277778
1	42301394	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.4
1	42301405	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.181818
1	42301406	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.136364
1	42301429	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.277778
1	42301440	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.2
1	42301467	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.136364
1	42301469	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.227273
1	42328763	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.125
1	42328764	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.111111
1	42328778	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.111111
1	42328831	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.166667
1	42328832	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.230769
1	42328837	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.176471
1	42328866	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.1875
17	42343575	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.363636
17	42343681	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.125
17	42343720	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.105263
17	42343725	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.15
17	42359068	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.111111
17	42359074	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.111111
17	42359100	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.117647
17	42359135	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.142857
17	42359164	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
12	42359932	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.25
12	42359978	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.181818
12	42359981	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.181818
12	42359987	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
8	42362969	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.105263
8	42363039	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.0869565
8	42363369	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.166667
8	42363443	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.1
8	42363460	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.363636
17	42363727	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.117647
17	42365767	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.111111
17	42365794	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.1875
17	42365849	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.454545
17	42365857	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42368495	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.125
17	42368520	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.230769
17	42368552	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.176471
17	42368556	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.117647
17	42368638	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.0645161
17	42368642	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.185185
17	42368697	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.05
17	42370050	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.666667
17	42370203	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42370531	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.111111
17	42370536	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42370658	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.105263
17	42370846	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.25
17	42370860	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.4
17	42378110	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.142857
17	42378123	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.0689655
17	42383195	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.0909091
17	42384189	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42384194	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42384267	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.333333
17	42384333	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.25
17	42384652	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42384752	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42386687	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.0869565
8	42520178	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42531827	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	42531891	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.142857
8	42531915	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0857143
8	42531924	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.117647
8	42531930	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0625
8	42531957	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.333333
8	42532022	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42532024	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1
8	42532030	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.176471
8	42532032	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.142857
8	42532045	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.117647
8	42532061	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	42532094	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.105263
8	42532100	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.15
8	42532106	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42532118	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42532122	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.181818
8	42533433	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.3
8	42533467	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.3
8	42533530	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.4375
8	42533533	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.666667
8	42533534	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.444444
8	42533581	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42533582	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.111111
8	42533756	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.636364
8	42533784	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.590909
8	42533797	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.233333
8	42533823	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.272727
8	42533826	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.121212
8	42533827	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.111111
8	42533829	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0571429
8	42533832	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42533859	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.535714
8	42533887	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.291667
8	42534072	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1
8	42534082	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.130435
8	42534095	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42534105	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.578947
8	42534132	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.5
8	42534144	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.181818
8	42534151	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.583333
8	42534193	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.266667
8	42534196	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.4
8	42534199	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.133333
8	42534203	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.357143
8	42534222	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.133333
8	42534295	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
22	42563084	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
22	42563085	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.8
22	42564524	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
22	42564570	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
22	42597918	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.0833333
22	42598221	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.25
3	42603089	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.115385
3	42618088	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.272727
3	42618095	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.285714
3	42618096	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.285714
6	42685059	A->G	+	ENSG00000024048	UBR2	protein_coding	Intergenic	.	.	Alu	0.181818
1	42699715	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.133333
22	42804178	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42804184	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.181818
10	42806679	A->G	+	ENSG00000165733	BMS1	protein_coding	Intergenic	.	.	Alu	0.363636
17	42812983	A->G	-	ENSG00000126581	BECN1	protein_coding	Intergenic	.	.	Alu	0.3
22	42824119	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42828888	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42836054	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.181818
22	42836055	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
21	42843549	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.117647
8	42941397	A->G	+	ENSG00000168172	HOOK3	protein_coding	Intergenic	.	.	Alu	1
8	42941403	A->G	+	ENSG00000168172	HOOK3	protein_coding	Intergenic	.	.	Alu	0.142857
8	42941450	A->G	+	ENSG00000168172	HOOK3	protein_coding	Intergenic	.	.	Alu	0.2
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.266667
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
22	42984111	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.272727
22	43009955	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.583333
22	43010007	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.8125
22	43010008	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	43010010	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.266667
22	43010046	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	43010058	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.111111
22	43010073	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.148148
22	43010074	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.0740741
22	43010147	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	43010149	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.166667
13	43024986	A->G	+	ENSG00000120675	DNAJC15	protein_coding	Intergenic	.	.	Alu	0.111111
13	43024999	A->G	+	ENSG00000120675	DNAJC15	protein_coding	Intergenic	.	.	Alu	0.4375
13	43025009	A->G	+	ENSG00000120675	DNAJC15	protein_coding	Intergenic	.	.	Alu	0.117647
13	43025036	A->G	+	ENSG00000120675	DNAJC15	protein_coding	Intergenic	.	.	Alu	0.181818
8	43070068	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	43070092	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.8
8	43070093	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.3125
5	43128383	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0465116
5	43128393	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0487805
5	43128401	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0454545
5	43128402	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.177778
5	43128444	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0714286
5	43128470	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.148148
5	43128472	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.192308
5	43128476	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.103448
5	43128477	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.185185
5	43128478	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.185185
5	43128503	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43128506	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.125
5	43128775	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.352941
5	43128791	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43128851	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.227273
5	43128883	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.272727
5	43129074	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43129732	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.25
5	43129754	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129755	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.25
5	43129758	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43129794	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129807	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.133333
5	43130056	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.347826
5	43130059	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43130082	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.08
5	43130113	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0869565
5	43130117	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0833333
5	43130125	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0769231
5	43130130	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43130143	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.454545
5	43130184	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43130185	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.16
5	43130251	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43130252	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.125
10	43140047	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.111111
10	43140125	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0606061
10	43140127	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0967742
10	43141123	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.461538
10	43141130	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.333333
10	43141146	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.461538
10	43141477	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.111111
10	43141545	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.176471
5	43153370	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43153548	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.352941
5	43153586	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.473684
5	43153587	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
2	43171564	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	43214840	A->G	+	ENSG00000184988	TMEM106A	protein_coding	Intergenic	.	.	Alu	0.181818
11	43388861	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.142857
11	43388869	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.25
15	43419452	A->G	-	ENSG00000067369	TP53BP1	protein_coding	Intergenic	.	.	Alu	0.125
15	43419457	A->G	-	ENSG00000067369	TP53BP1	protein_coding	Intergenic	.	.	Alu	0.692308
15	43419458	A->G	-	ENSG00000067369	TP53BP1	protein_coding	Intergenic	.	.	Alu	0.692308
11	43472999	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.142857
11	43473004	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.153846
11	43473064	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.2
11	43473104	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.142857
11	43473790	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.111111
5	43480488	A->G	-	ENSG00000151881	TMEM267	protein_coding	Intergenic	.	.	Alu	0.111111
20	43518978	A->G	+	ENSG00000185513	L3MBTL1	protein_coding	Intergenic	.	.	Alu	0.181818
1	43661353	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.818182
1	43661354	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.454545
1	43661359	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.909091
1	43661397	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.75
1	43661423	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.125
1	43661485	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.5
15	43760228	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.142857
15	43760270	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.586207
15	43760272	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.0625
15	43760280	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.0689655
15	43760284	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.25
15	43760376	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.111111
15	43846902	A->G	+	ENSG00000092470	WDR76	protein_coding	Intergenic	.	.	Alu	0.181818
11	43847613	A->G	+	ENSG00000149084	HSD17B12	protein_coding	Intergenic	.	.	Alu	0.2
11	43857701	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.153846
21	43892200	A->G	+	ENSG00000160216	AGPAT3	protein_coding	Intergenic	.	.	Alu	0.181818
2	44171659	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0769231
2	44171665	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0666667
2	44179823	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.2
2	44199075	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.235294
2	44199137	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.15625
2	44199368	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0487805
2	44204752	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0714286
2	44209683	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.176471
2	44223554	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.592593
2	44223631	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.5
2	44223632	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.5
2	44223657	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0625
2	44223669	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	44223673	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.178571
2	44223695	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.4
2	44223722	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.125
2	44223737	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.210526
2	44223766	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.137931
2	44224295	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.142857
2	44224296	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.214286
1	44431409	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.272727
15	44433240	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.3
1	44434893	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.111111
1	44434952	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0769231
1	44434960	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44434961	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0952381
1	44434969	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.25
1	44435815	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.133333
1	44435819	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
17	44445631	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.103448
17	44445644	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.136364
17	44445651	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.136364
17	44445675	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.125
17	44445699	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.357143
17	44445700	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.266667
17	44445737	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.142857
1	44451132	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.05
1	44463215	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.428571
1	44463216	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44463243	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44475891	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.148148
1	44475897	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0952381
1	44475901	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0952381
1	44475905	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44475927	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.333333
1	44475932	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0909091
1	44475933	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0909091
15	44478219	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.25
15	44478261	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.142857
15	44478397	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.117647
1	44480765	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44481221	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44481304	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
17	44488061	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.166667
1	44490319	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44490385	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44493951	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.583333
1	44493952	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.583333
1	44493965	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.363636
1	44494029	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44503127	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44503322	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
15	44505614	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.214286
15	44505654	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.111111
15	44505666	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.133333
15	44505675	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.285714
20	44515789	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.307692
20	44515795	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.25
20	44515851	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.25
20	44515852	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.230769
20	44515875	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.153846
20	44515883	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.166667
20	44516458	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.133333
20	44516485	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.555556
20	44516490	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.1875
20	44516527	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.368421
20	44516528	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.176471
20	44516563	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.1
20	44516569	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.103448
20	44516608	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.210526
20	44516615	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.3
20	44516634	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.15
15	44522085	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.222222
15	44522092	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.176471
15	44522113	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.08
15	44522151	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.0952381
15	44522163	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.176471
15	44522167	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.705882
15	44522217	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.111111
15	44522286	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.5
1	44527805	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.5
1	44527811	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.4375
1	44527815	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.588235
15	44549620	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.0833333
15	44549647	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.382353
15	44549673	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.0952381
15	44549687	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.235294
15	44549712	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.2
15	44549840	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.0833333
7	44577058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
7	44577059	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
15	44601440	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.2
15	44601640	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.142857
15	44601650	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.2
15	44601854	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.25
15	44603292	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.2
22	44675279	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	1
22	44675293	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.25
22	44675321	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.133333
22	44675328	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.111111
22	44675355	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.5
22	44675367	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.230769
7	44803266	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.461538
7	44803279	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.117647
7	44803288	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.157895
7	44803299	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.142857
7	44803323	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.4
7	44803340	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.2
7	44803367	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.363636
7	44803377	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.133333
7	44803380	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.466667
7	44803399	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.125
7	44803435	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.133333
7	44803440	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.411765
7	44803453	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.230769
7	44807932	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.181818
7	44812354	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.133333
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.3
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.153846
7	44833222	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.153846
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.117647
7	44834875	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.156863
7	44834885	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0555556
7	44834894	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0344828
7	44834907	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0377358
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.209302
7	44836002	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.115385
7	44836027	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0588235
7	44836028	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0909091
7	44836043	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0625
7	44836077	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0833333
7	44836095	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0714286
7	44836213	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.176471
7	44838056	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.037037
7	44838076	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0652174
7	44838082	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.469388
7	44838095	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0465116
7	44838099	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.097561
7	44838109	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0444444
7	44838143	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.138889
7	44838144	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0882353
7	44838163	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.12
7	44838174	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.157895
7	44838201	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.230769
17	44860667	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.25
17	44860688	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.363636
17	44860702	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.3
17	44860738	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.181818
17	44860751	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.8
17	44860764	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.181818
17	44860807	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.4
17	44867357	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.214286
17	44867416	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.5625
17	44867469	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.15
17	44867470	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.15
17	44867508	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.75
17	44867532	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.357143
17	44873869	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.2
17	44874272	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.25
17	44874303	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.2
X	44883888	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.5
X	44883913	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.129032
X	44883932	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	44883952	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0689655
X	44883955	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.25
X	44883981	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0645161
X	44883982	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.103448
X	44883987	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.178571
X	44892819	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.230769
X	44892838	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.3
X	44892841	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.3
X	44892850	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.133333
X	44892856	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.230769
X	44893053	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0526316
X	44893064	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.108696
X	44893081	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0384615
X	44893104	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0526316
X	44893107	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.230769
X	44893109	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.117647
X	44893116	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.342105
X	44893138	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	44964263	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0833333
X	44964328	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.304348
X	44964355	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	1
X	44964364	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
19	45003216	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45003222	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45003328	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45003364	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45006796	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0967742
19	45006799	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0689655
19	45006801	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.09375
19	45006802	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45006803	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.114286
19	45007973	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
X	45010255	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	45010260	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.25
X	45010263	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
19	45012585	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.121212
19	45012629	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0740741
19	45012682	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0666667
19	45012716	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0740741
19	45012785	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.135135
19	45012802	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0789474
19	45012848	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0833333
19	45012886	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.4
19	45012889	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45012890	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45012891	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.307692
19	45012893	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45012975	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45013350	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.4
19	45013375	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45013376	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45013744	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45013747	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45013781	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.210526
19	45015501	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.3
19	45015544	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45015588	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.266667
19	45015592	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45016758	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45041127	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.666667
19	45065259	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.153846
19	45065269	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45065332	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.142857
19	45065392	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.545455
17	45065465	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.2
17	45065509	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.166667
19	45066516	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.2
19	45066529	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.5
19	45066543	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.363636
19	45066544	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.583333
19	45066582	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.133333
14	45092522	A->G	+	ENSG00000185246	PRPF39	protein_coding	Intergenic	.	.	Alu	0.416667
19	45095579	A->G	+	ENSG00000104866	PPP1R37	protein_coding	Intergenic	.	.	Alu	0.181818
19	45095580	A->G	+	ENSG00000104866	PPP1R37	protein_coding	Intergenic	.	.	Alu	0.636364
19	45095642	A->G	+	ENSG00000104866	PPP1R37	protein_coding	Intergenic	.	.	Alu	0.2
17	45153436	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.2
17	45153629	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.176471
14	45208604	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.285714
14	45208605	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.4
17	45215504	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.2
17	45215505	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.5625
17	45217625	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.4
17	45217631	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	1
17	45217805	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.357143
17	45217836	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.2
17	45218009	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.181818
17	45218065	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.285714
17	45218075	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.333333
17	45218235	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.384615
12	45250612	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.2
12	45250665	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.153846
12	45250668	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.461538
12	45250950	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.181818
12	45250958	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.153846
12	45250993	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.166667
13	45272509	A->G	+	ENSG00000188342	GTF2F2	protein_coding	Intergenic	.	.	Alu	0.454545
13	45272510	A->G	+	ENSG00000188342	GTF2F2	protein_coding	Intergenic	.	.	Alu	0.583333
17	45301931	A->G	-	ENSG00000006062	MAP3K14	protein_coding	Intergenic	.	.	Alu	0.3
17	45301999	A->G	-	ENSG00000006062	MAP3K14	protein_coding	Intergenic	.	.	Alu	0.2
3	45402994	A->G	+	ENSG00000011376	LARS2	protein_coding	Intergenic	.	.	Alu	0.181818
17	45506631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
17	45506636	A->G	-	.	.	.	Intergenic	.	.	Alu	0.129032
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
17	45506728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
13	45520209	A->G	+	ENSG00000136152	COG3	protein_coding	Intergenic	.	.	Alu	0.4
6	45535483	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	45566298	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	45566333	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	45566443	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	45648221	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45653316	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.363636
1	45653611	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45653917	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.388889
1	45653918	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.294118
1	45656718	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0606061
1	45656777	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.111111
1	45656781	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.25
1	45656782	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.421053
1	45656794	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45656884	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.142857
1	45656885	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45656932	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45656944	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.133333
1	45656950	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45671295	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	45671330	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.4
1	45671347	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.105263
1	45671348	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.105263
1	45671423	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45671428	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.411765
1	45671429	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.75
1	45680281	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.176471
1	45680306	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.115385
2	45716396	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.75
12	45801218	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.416667
20	45838210	A->G	-	ENSG00000124104	SNX21	protein_coding	Intergenic	.	.	Alu	0.2
20	45838214	A->G	-	ENSG00000124104	SNX21	protein_coding	Intergenic	.	.	Alu	0.2
12	45898658	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.142857
12	45898660	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.285714
12	45898661	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.5
12	45898778	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45899019	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.153846
12	45899088	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45899110	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.153846
12	45899151	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.5
12	45899161	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.133333
12	45899165	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.333333
12	45899178	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.153846
12	45899227	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45899229	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.153846
12	45899448	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.166667
12	45936175	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.636364
12	45936176	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.272727
12	45936227	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.181818
12	45936280	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.263158
12	45936319	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.133333
12	45936320	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.133333
12	45936360	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.133333
12	45936361	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.333333
12	45954662	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.097561
12	45954685	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0571429
20	45956361	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.375
20	45956366	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.411765
20	45956367	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.411765
20	45956403	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.375
12	45958039	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0540541
10	45994130	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.352941
10	45994138	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.25
10	45994144	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.1
10	45994154	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.105263
10	45994169	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.157895
10	45994205	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.1875
10	45994219	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.166667
10	45994243	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.181818
17	46049313	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.230769
17	46062451	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.411765
17	46062487	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	46062630	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.125
17	46062631	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.142857
18	46064353	A->G	-	ENSG00000152229	PSTPIP2	protein_coding	Intergenic	.	.	Alu	0.2
18	46064359	A->G	-	ENSG00000152229	PSTPIP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	46077672	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.166667
18	46095592	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.133333
18	46106304	A->G	+	ENSG00000152240	HAUS1	protein_coding	Intergenic	.	.	Alu	0.363636
18	46106307	A->G	+	ENSG00000152240	HAUS1	protein_coding	Intergenic	.	.	Alu	0.363636
18	46106308	A->G	+	ENSG00000152240	HAUS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	46148641	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.125
17	46148654	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.117647
17	46148672	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.4
17	46148711	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.294118
17	46148719	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.176471
17	46148723	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.75
17	46148828	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.545455
17	46155192	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.3
17	46155278	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.111111
18	46189031	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.166667
18	46189038	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.3
18	46189068	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.153846
18	46221439	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.0740741
1	46294033	A->G	-	ENSG00000132128	LRRC41	protein_coding	Intergenic	.	.	Alu	0.181818
1	46356612	A->G	+	ENSG00000117481	NSUN4	protein_coding	Intergenic	.	.	Alu	0.142857
1	46356613	A->G	+	ENSG00000117481	NSUN4	protein_coding	Intergenic	.	.	Alu	0.153846
11	46360683	A->G	+	ENSG00000149091	DGKZ	protein_coding	Intergenic	.	.	Alu	0.3
21	46461116	A->G	+	ENSG00000160305	DIP2A	protein_coding	Intergenic	.	.	Alu	0.454545
21	46461177	A->G	+	ENSG00000160305	DIP2A	protein_coding	Intergenic	.	.	Alu	0.947368
21	46461183	A->G	+	ENSG00000160305	DIP2A	protein_coding	Intergenic	.	.	Alu	0.3125
21	46461187	A->G	+	ENSG00000160305	DIP2A	protein_coding	Intergenic	.	.	Alu	0.666667
11	46575782	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.181818
11	46575790	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.818182
11	46625086	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.230769
11	46625114	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.142857
11	46625142	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.0869565
11	46627900	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	46628003	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.153846
11	46636431	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.166667
11	46636437	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.461538
11	46636451	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.125
11	46648630	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.1875
11	46648656	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.117647
X	46655212	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.181818
X	46655217	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.416667
11	46658926	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
19	46681016	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	1
11	46683167	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	Intergenic	.	.	Alu	0.181818
19	46706928	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.153846
19	46707067	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.166667
19	46708353	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	46708478	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.454545
19	46708533	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.461538
19	46709245	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.117647
19	46709246	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.166667
19	46709262	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.266667
19	46709264	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.142857
19	46709461	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	46733498	A->G	+	ENSG00000171150	SOCS5	protein_coding	Intergenic	.	.	Alu	0.272727
10	46814128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
10	46814158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
11	46831953	A->G	-	ENSG00000175216	CKAP5	protein_coding	Intergenic	.	.	Alu	0.2
11	47029980	A->G	+	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.363636
11	47030048	A->G	+	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.2
11	47030084	A->G	+	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.166667
2	47054781	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.416667
3	47059005	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47100081	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47100107	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.333333
3	47132257	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
X	47159199	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.181818
X	47159226	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.2
X	47159245	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.3
X	47159289	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.333333
17	47160366	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.0882353
3	47160429	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.388889
3	47160438	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.24
3	47160503	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.388889
3	47160504	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.1875
3	47160513	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.352941
3	47160514	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.15
17	47169030	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.2
17	47169089	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.142857
17	47169115	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.142857
17	47169129	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.2
17	47169162	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.166667
17	47169234	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.117647
17	47169272	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.153846
19	47172566	A->G	+	ENSG00000142230	SAE1	protein_coding	Intergenic	.	.	Alu	0.3
19	47172583	A->G	+	ENSG00000142230	SAE1	protein_coding	Intergenic	.	.	Alu	0.454545
19	47172584	A->G	+	ENSG00000142230	SAE1	protein_coding	Intergenic	.	.	Alu	0.636364
19	47172620	A->G	+	ENSG00000142230	SAE1	protein_coding	Intergenic	.	.	Alu	0.636364
19	47179291	A->G	+	ENSG00000142230	SAE1	protein_coding	Intergenic	.	.	Alu	0.181818
19	47191933	A->G	+	ENSG00000142230	SAE1	protein_coding	Intergenic	.	.	Alu	0.416667
11	47232614	A->G	+	ENSG00000134574	DDB2	protein_coding	Intergenic	.	.	Alu	0.3
20	47288479	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.1
20	47288499	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.153846
20	47288502	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.230769
20	47288558	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.115385
20	47288572	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.125
20	47288587	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.153846
20	47288595	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.444444
20	47288597	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.166667
20	47288625	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.0740741
20	47288630	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.257143
20	47288660	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.116279
20	47288662	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.0714286
1	47299325	A->G	-	ENSG00000123473	STIL	protein_coding	Intergenic	.	.	Alu	0.4
16	47301525	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.3
16	47301545	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.7
16	47301560	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.692308
16	47301573	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.166667
16	47301669	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.181818
3	47332276	A->G	+	ENSG00000114648	KLHL18	protein_coding	Intergenic	.	.	Alu	0.8
11	47367830	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47367882	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.666667
11	47367960	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.583333
11	47381835	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
2	47405235	A->G	+	ENSG00000095002	MSH2	protein_coding	Intergenic	.	.	Alu	0.2
2	47405237	A->G	+	ENSG00000095002	MSH2	protein_coding	Intergenic	.	.	Alu	0.133333
2	47405275	A->G	+	ENSG00000095002	MSH2	protein_coding	Intergenic	.	.	Alu	0.181818
2	47405301	A->G	+	ENSG00000095002	MSH2	protein_coding	Intergenic	.	.	Alu	0.272727
16	47409553	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.307692
16	47409554	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.384615
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.222222
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.157895
11	47480879	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.32
11	47480914	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47480924	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.208333
11	47480965	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480967	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47481147	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.133333
11	47481169	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.08
11	47481172	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.26087
11	47481248	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0882353
11	47481265	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.148148
11	47481292	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.137931
11	47481299	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0571429
11	47481308	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0571429
11	47481309	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0555556
11	47481323	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0967742
11	47481324	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0645161
11	47481325	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0625
11	47481362	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.481481
11	47481396	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	47481411	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.176471
20	47510313	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.461538
6	47510952	A->G	+	ENSG00000198087	CD2AP	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47512226	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47512249	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.277778
11	47512250	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.222222
11	47512264	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47512291	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
20	47512404	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47512439	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.153846
20	47512447	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.133333
20	47512489	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.142857
20	47512509	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.125
11	47513581	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.08
11	47513588	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	47513592	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
11	47513598	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
20	47513599	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.1875
20	47513629	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.222222
11	47514067	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.3125
11	47514093	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.157895
11	47514096	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.105263
11	47514097	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.105263
20	47518941	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.230769
20	47519029	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.166667
20	47519233	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.3
20	47519325	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.25
20	47519842	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	47519879	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.1875
20	47519891	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.142857
10	47525933	A->G	-	ENSG00000254929	AL591684.2	processed_transcript	Intergenic	.	.	Alu	0.2
10	47525961	A->G	-	ENSG00000254929	AL591684.2	processed_transcript	Intergenic	.	.	Alu	0.142857
10	47525969	A->G	-	ENSG00000254929	AL591684.2	processed_transcript	Intergenic	.	.	Alu	0.153846
10	47526045	A->G	-	ENSG00000254929	AL591684.2	processed_transcript	Intergenic	.	.	Alu	0.7
20	47532986	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.166667
11	47534101	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47534121	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.15
11	47534125	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47534132	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.133333
11	47534166	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.346154
11	47534177	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47534203	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	47534302	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47534325	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.263158
11	47537386	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.368421
11	47537388	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.45
11	47537422	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.111111
11	47537519	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47537998	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47538054	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.6875
11	47538080	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
17	47542529	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.166667
11	47542552	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0689655
11	47542560	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.321429
11	47542569	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47542590	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.34375
11	47542595	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0588235
11	47542630	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.277778
11	47542635	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0769231
11	47542636	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.05
11	47542656	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.111111
11	47542668	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47542693	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.08
11	47542748	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.130435
11	47542749	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.409091
11	47542770	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47542771	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.190476
11	47542876	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	47542915	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47542936	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
20	47550396	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
17	47573661	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.307692
11	47614706	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	47616423	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	47616758	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
11	47616821	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
11	47616887	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
11	47616916	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	47616957	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
11	47616972	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	47625230	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.230769
3	47625234	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.25
3	47722426	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.421053
3	47722430	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.125
3	47722435	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.142857
3	47727753	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.181818
3	47727842	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.111111
3	47727997	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.230769
3	47728027	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	47728042	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.1875
3	47728155	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.461538
3	47728183	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.285714
3	47728192	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.107143
3	47728270	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.157895
3	47728281	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.0512821
3	47728289	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.170732
3	47728290	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.175
3	47728291	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.0731707
3	47728292	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.047619
3	47728360	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.047619
3	47728369	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.0588235
3	47740269	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47765936	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47765942	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
8	47786868	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.125
8	47786890	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.222222
8	47786894	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.125
8	47786905	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.111111
8	47786906	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.111111
8	47786908	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.117647
8	47786909	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.411765
2	47793059	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.2
2	47793375	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.181818
2	47793418	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.125
2	47793450	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.125
2	47793451	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.125
2	47793526	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.466667
2	47793527	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.15
11	47822461	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47825420	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.272727
11	47825584	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.166667
11	47825605	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.2
11	47825656	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.272727
11	47825657	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.272727
2	47825669	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47825721	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.1875
2	47874807	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.1
2	47874808	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.09375
2	47874810	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0606061
2	47877125	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47877955	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47878434	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47878468	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47878485	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.148148
2	47878489	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.392157
2	47878494	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.04
2	47878527	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.128205
2	47878532	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.297297
2	47878533	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.216216
2	47878534	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47878539	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.277778
2	47878569	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0816327
2	47878576	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.188679
2	47878629	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.219512
2	47878634	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.047619
2	47878635	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.05
2	47878641	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.216216
2	47878651	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.222222
2	47878732	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.307692
2	47878734	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.214286
2	47878786	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.105263
2	47878798	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47878815	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.5
2	47878824	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.166667
2	47878832	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.08
2	47878833	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.08
2	47878838	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47878857	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47878867	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.1
2	47878879	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.266667
2	47878896	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.277778
2	47878919	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.333333
2	47878927	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.16129
2	47896408	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0606061
2	47896427	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0967742
2	47896468	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.105263
2	47896476	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.08
2	47896525	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
8	48014524	A->G	+	ENSG00000169139	UBE2V2	protein_coding	Intergenic	.	.	Alu	0.153846
8	48014579	A->G	+	ENSG00000169139	UBE2V2	protein_coding	Intergenic	.	.	Alu	0.3
3	48048685	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	48066965	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.125
3	48067077	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.3
3	48070272	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	48070301	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	48070308	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.416667
3	48070310	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.166667
4	48141785	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.526316
4	48141820	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.6
4	48141821	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.133333
4	48141878	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.32
4	48141886	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.652174
4	48141900	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.642857
4	48141917	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.1
4	48141926	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0909091
10	48356584	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.235294
10	48356586	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.25
10	48356722	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.25
10	48356739	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.117647
10	48356748	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.235294
16	48367070	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.2
16	48367101	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.416667
16	48367127	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.1875
16	48377487	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.214286
16	48377492	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.5
16	48377495	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.125
16	48377517	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.25
16	48377526	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.421053
16	48377527	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.166667
16	48377545	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.133333
16	48377571	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.166667
16	48377613	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.545455
16	48377614	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.545455
16	48377622	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.571429
10	48380103	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.117647
19	48458678	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.181818
19	48458746	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.181818
19	48458775	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.333333
19	48458777	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.166667
19	48458815	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.266667
19	48458816	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.470588
19	48458843	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.125
19	48459121	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.384615
19	48459146	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.357143
19	48459152	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.133333
19	48459160	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.181818
19	48459165	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.272727
19	48461043	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.307692
19	48461057	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.181818
19	48461199	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.125
19	48461235	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.454545
12	48664026	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	48664092	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0588235
12	48664093	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0882353
12	48664094	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.151515
12	48664097	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.121212
12	48664171	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	48664718	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0697674
12	48664777	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	48664787	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.16
12	48664788	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.08
3	48691941	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48697149	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.111111
3	48697153	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.176471
3	48697159	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.25
3	48697363	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48697364	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0731707
3	48697423	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.5
3	48697426	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.203704
3	48697431	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.139535
3	48697559	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.117647
3	48697560	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.222222
3	48697817	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48702541	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.272727
3	48702546	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48702554	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48702568	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48702582	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.263158
3	48702604	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.35
3	48702608	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.294118
3	48714309	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.176471
3	48714333	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.105263
3	48714455	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48714586	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.117647
3	48714587	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
17	48845488	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intergenic	.	.	Alu	0.727273
17	48858898	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intergenic	.	.	Alu	0.2
17	48866855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	48866856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	48866922	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
17	48866923	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	48866962	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
17	48867176	A->G	+	.	.	.	Intergenic	.	.	Alu	1
17	48867272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
17	48867299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
17	48867413	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	48867439	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
17	48867449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
17	48867453	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
17	48867471	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	48867485	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	48867597	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	48867598	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
4	48903680	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.176471
4	48903735	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.4
4	48903784	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	48903810	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.230769
3	48931442	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48933803	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48936796	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48938992	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48939570	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48939574	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	48943121	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.2
X	48950615	A->G	-	ENSG00000068308	OTUD5	protein_coding	Intergenic	.	.	Alu	0.3
X	48950616	A->G	-	ENSG00000068308	OTUD5	protein_coding	Intergenic	.	.	Alu	0.6
X	48950619	A->G	-	ENSG00000068308	OTUD5	protein_coding	Intergenic	.	.	Alu	0.2
X	48950675	A->G	-	ENSG00000068308	OTUD5	protein_coding	Intergenic	.	.	Alu	0.181818
13	48990641	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.304348
13	48990663	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.0833333
13	48990682	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.105263
13	48990687	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.125
13	48991431	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.3125
13	48991432	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.375
13	48991559	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.105263
13	48991567	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.15
13	48991580	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.1
13	48991609	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.222222
13	48991675	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.117647
X	48994326	A->G	-	ENSG00000068400	GRIPAP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	48994388	A->G	-	ENSG00000068400	GRIPAP1	protein_coding	Intergenic	.	.	Alu	0.1875
X	48994391	A->G	-	ENSG00000068400	GRIPAP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	49010143	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.307692
3	49010157	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.230769
3	49010355	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.846154
3	49010356	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.363636
3	49010461	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.125
3	49010795	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.166667
3	49010896	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.272727
3	49010897	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.416667
3	49010906	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.3
3	49010938	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.333333
3	49010945	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.230769
13	49060551	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.181818
3	49064203	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.25
3	49064204	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49064206	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.5
3	49069171	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.142857
3	49069679	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.4
3	49069681	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49069699	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49069703	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49069704	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49069752	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.4
20	49071563	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.181818
20	49071874	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.2
20	49072018	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.166667
3	49078788	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49078794	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.272727
3	49088080	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49088492	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.210526
3	49088525	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.117647
3	49088583	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.176471
3	49088584	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.333333
3	49088592	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.105263
3	49089107	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.125
20	49157452	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.142857
20	49163488	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.1875
20	49163493	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.133333
20	49163498	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.15
20	49163499	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.473684
20	49163554	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.133333
20	49163697	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.3
20	49180461	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.4
20	49232849	A->G	+	ENSG00000124228	DDX27	protein_coding	Intergenic	.	.	Alu	0.181818
3	49299157	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49299158	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49313023	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49313141	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49313142	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49321537	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.111111
3	49321552	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.133333
3	49321596	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49321606	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.416667
3	49365280	A->G	-	ENSG00000235908	RHOA-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
3	49365348	A->G	-	ENSG00000235908	RHOA-IT1	sense_intronic	Intergenic	.	.	Alu	0.214286
3	49368819	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.333333
3	49368824	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0909091
3	49368846	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.230769
3	49368872	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49368879	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0833333
3	49368936	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.35
3	49368973	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.157895
3	49368979	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
3	49369162	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.1875
3	49369183	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49369188	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.153846
3	49385380	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.142857
3	49385384	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0909091
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.7
3	49407330	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.25
3	49407331	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.184211
3	49407336	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0740741
3	49407358	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0447761
3	49407371	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.119403
3	49407374	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.128571
3	49407413	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0294118
3	49407414	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.115942
3	49407417	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0597015
3	49407429	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.113208
17	49606708	A->G	-	ENSG00000121067	SPOP	protein_coding	Intergenic	.	.	Alu	0.2
14	49646375	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.181818
14	49646413	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.153846
14	49646414	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.153846
14	49646493	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.272727
14	49646524	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.5
14	49646555	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.2
14	49657565	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.545455
14	49657569	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.384615
14	49657573	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.25
20	49683597	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.142857
20	49683611	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.3
20	49683612	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.7
3	49737044	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.272727
3	49752893	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49752963	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49755182	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49755209	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49762951	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.3
3	49762954	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49762975	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.105263
3	49762999	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49763004	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49763242	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49772935	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.214286
13	49788502	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.272727
13	49788503	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.166667
13	49788508	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.4
13	49788516	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.133333
13	49788570	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.08
13	49788579	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.125
13	49788589	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.08
13	49788591	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.0869565
13	49788597	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.217391
13	49788607	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.107143
13	49788619	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.142857
13	49788637	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	49788643	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.157895
13	49788662	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.291667
13	49788665	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	49788675	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.0909091
22	49796255	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.105263
14	49819987	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.0967742
14	49819989	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.0714286
14	49820019	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.103448
14	49820020	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.214286
14	49820063	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.111111
14	49820084	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.375
14	49820090	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.228571
14	49823010	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.214286
14	49823074	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.384615
14	49823075	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.230769
14	49838615	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.0645161
14	49839215	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.08
14	49839242	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.111111
14	49839261	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.0833333
14	49839285	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.0869565
14	49839286	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.0869565
22	49864760	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.333333
22	49868892	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.266667
22	49868897	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.333333
22	49869088	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.117647
22	49869102	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.181818
20	49873585	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.166667
20	49873587	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.153846
20	49873610	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.2
20	49877032	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.3
20	49877056	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.3
20	49877102	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.133333
20	49939890	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	1
20	49939893	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	1
20	49939894	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.307692
20	49939895	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.153846
20	49939957	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.571429
20	49939963	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.153846
10	49963756	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.125
10	49963795	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.0645161
10	49963869	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.1
10	49966650	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.2
10	49966689	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.4
10	49966691	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.6
10	49966705	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.4
10	49969508	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.117647
13	50008882	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.1875
13	50008963	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.214286
3	50010764	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50010782	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.25
3	50026786	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.153846
3	50026792	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.333333
3	50026856	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50032433	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50033176	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.153846
3	50033177	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50033190	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.363636
3	50038644	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.454545
3	50038646	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.416667
3	50038674	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.142857
3	50038690	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.307692
3	50038712	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.4
3	50038758	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.4
3	50038778	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50040183	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50040191	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.181818
13	50047609	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.166667
13	50065553	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.538462
13	50065558	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.153846
13	50065564	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.4
13	50065565	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.333333
13	50065569	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.4
13	50065578	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.208333
13	50065621	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.129032
13	50065625	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.233333
13	50065631	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.689655
13	50065657	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.166667
20	50084964	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.307692
20	50084993	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.2
20	50091474	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.3
20	50091475	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.545455
20	50091487	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.2
3	50097207	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50097246	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50097249	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3
3	50097275	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50099069	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50099076	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50099093	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.333333
3	50099170	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1875
3	50112155	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.125
3	50112204	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.105263
3	50112217	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50112221	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.222222
3	50112266	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.136364
3	50112269	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.37037
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.423077
3	50112305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.113636
3	50112322	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0408163
3	50112328	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0540541
3	50112337	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.666667
3	50112361	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1
14	50115290	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.4
13	50118735	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.15
13	50118744	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.0689655
13	50118866	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.166667
3	50119654	A->G	+	ENSG00000235016	SEMA3F-AS1	antisense	Intergenic	.	.	Alu	0.0952381
12	50153376	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50153408	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.5
12	50153412	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.0952381
12	50153418	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.173913
12	50153451	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.142857
12	50153453	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.142857
12	50153506	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.5
12	50153512	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.307692
12	50162007	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.133333
12	50162052	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.15
12	50162053	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.1
12	50162055	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.1
12	50162143	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.142857
12	50162148	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.153846
12	50164057	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.4
12	50164065	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.166667
12	50164084	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.333333
12	50164092	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50164097	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50164098	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50164319	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50164348	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.384615
12	50164349	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.214286
12	50164353	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.166667
12	50164378	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.181818
14	50193133	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.230769
14	50193269	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50197749	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.116279
14	50197781	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0555556
14	50197785	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.103448
14	50197791	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0606061
14	50197821	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.128205
14	50197826	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.238095
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.47619
14	50197884	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.130435
14	50197887	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.137931
14	50197899	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.388889
14	50197908	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0666667
14	50197923	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.12
14	50197962	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	50214976	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0789474
15	50300644	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.125
15	50324612	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.142857
15	50324641	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50324682	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.190476
15	50324683	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	50330009	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.166667
15	50331971	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.272727
15	50331972	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.277778
15	50331996	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	50332012	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.08
15	50332013	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50332054	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	50332076	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.121212
15	50332121	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.205882
15	50332125	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0625
15	50332147	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0555556
15	50332148	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0555556
15	50332150	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.114286
15	50332154	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0526316
17	50334390	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	50334402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
15	50334575	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.25
15	50334596	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.08
15	50334605	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.125
15	50334646	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.45
3	50335151	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	50335169	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.111111
3	50335454	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0540541
3	50335518	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.09375
3	50335528	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.117647
17	50335544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
3	50335545	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50335570	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.125
3	50335662	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.117647
7	50339643	A->G	+	ENSG00000185811	IKZF1	protein_coding	Intergenic	.	.	Alu	0.111111
15	50346938	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0434783
22	50374682	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.153846
22	50374756	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.153846
22	50374763	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.153846
22	50374764	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.153846
22	50374807	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.142857
22	50381754	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.153846
22	50381761	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.230769
22	50383957	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.2
22	50396048	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.166667
22	50396074	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.157895
22	50396075	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.45
22	50396102	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.285714
12	50409439	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.2
12	50409575	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.2
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.454545
5	50413659	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.125
5	50413672	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.388889
5	50413684	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.545455
12	50460015	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.2
20	50528593	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.214286
20	50528603	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.235294
20	50528629	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.142857
20	50528634	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.133333
15	50582178	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.1875
15	50582186	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.125
15	50582208	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.5625
20	50588893	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	0.133333
20	50588920	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	0.3
20	50588961	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	0.166667
15	50619306	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.3
15	50619323	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.133333
15	50619359	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.166667
15	50619401	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.105263
15	50619438	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.125
15	50619441	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.125
3	50621519	A->G	+	ENSG00000114738	MAPKAPK3	protein_coding	Intergenic	.	.	Alu	0.2
3	50621643	A->G	+	ENSG00000114738	MAPKAPK3	protein_coding	Intergenic	.	.	Alu	0.181818
3	50621649	A->G	+	ENSG00000114738	MAPKAPK3	protein_coding	Intergenic	.	.	Alu	0.142857
15	50656535	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.333333
14	50657146	A->G	-	ENSG00000151748	SAV1	protein_coding	Intergenic	.	.	Alu	0.5
1	50695886	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.153846
17	50727987	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.117647
17	50727997	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.25641
17	50728012	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0882353
17	50728059	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50728063	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.142857
17	50730115	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.666667
17	50730117	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	1
17	50730138	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.5
17	50730139	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.125
17	50730248	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0909091
17	50730365	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.153846
17	50730368	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.142857
17	50730374	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.111111
17	50730400	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.36
17	50730401	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.592593
17	50730430	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0909091
17	50730450	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.27027
17	50730464	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50730465	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.171429
17	50730472	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50730685	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.12
17	50730686	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0769231
17	50730734	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.153846
17	50730780	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.176471
17	50730855	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.230769
17	50735110	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.25
17	50735155	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.117647
17	50735179	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.105263
17	50735180	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.3
16	50748427	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.105263
16	50748428	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.15
16	50748450	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.105263
19	50792793	A->G	-	ENSG00000142513	ACP4	protein_coding	Intergenic	.	.	Alu	0.666667
14	50800907	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.166667
14	50803964	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.37931
14	50803965	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.366667
14	50803969	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.0740741
14	50803988	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.117647
14	50804001	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.166667
14	50804034	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.133333
14	50804040	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.214286
14	50804044	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.25
14	50804079	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.25
14	50804124	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.157895
14	50804139	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.1
14	50811312	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.285714
20	50922658	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.114286
20	50922704	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.166667
13	50939236	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	50957516	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.25
17	50971564	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.384615
17	50971565	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.272727
17	50971606	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	50971632	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.636364
17	50991709	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.333333
17	50991761	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	50991762	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.285714
17	50991788	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.4
17	50991794	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	50991896	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.133333
17	50991992	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.285714
17	50992040	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.235294
17	50992087	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.307692
17	50992089	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	50998090	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0512821
17	50998095	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.236842
17	50998128	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.117647
17	50998129	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0526316
17	50998141	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0588235
17	50998143	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.212121
17	50998160	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0882353
17	50998207	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0909091
17	50998209	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	50998210	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.565217
17	50998211	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.636364
17	50998214	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.47619
17	50998220	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.384615
17	50998297	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.285714
17	50998302	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.533333
17	50998303	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.933333
17	50998325	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51054195	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51054202	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51054219	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3
17	51083331	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.08
17	51083332	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0769231
17	51083337	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0740741
17	51083383	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.125
17	51086060	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.26087
17	51086065	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.130435
17	51086066	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.230769
17	51086083	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.147059
17	51086157	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0952381
17	51086158	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51086159	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51086179	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.12
17	51086207	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.130435
17	51109785	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51109844	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.4
17	51216070	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.153846
1	51246444	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51246601	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51246602	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.272727
1	51246898	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.3
1	51251892	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.333333
1	51251893	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.272727
1	51451979	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.0952381
1	51452020	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.2
3	51469355	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.16
3	51469368	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	51469395	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.08
3	51469408	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	51469423	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.222222
3	51469424	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	1
3	51469433	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.0967742
3	51469462	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	51469476	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.107143
3	51471276	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.25
3	51471280	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.25
3	51471281	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	51471322	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.333333
3	51471348	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.384615
3	51484847	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	51485999	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	51486003	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.125
3	51486020	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	51486024	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.136364
3	51486030	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.238095
3	51486037	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	51486069	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	51486070	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	51486085	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.15
3	51486093	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.117647
3	51486095	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.176471
3	51486132	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.125
3	51486136	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.263158
3	51486140	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.105263
3	51486445	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.214286
3	51487100	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.15
3	51487104	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	51487198	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.666667
3	51487229	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.428571
3	51549698	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.3
1	51633355	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.1875
1	51633523	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.2
1	51633670	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.529412
1	51643871	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.181818
1	51643897	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.153846
1	51643959	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.210526
1	51643965	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.176471
1	51676584	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.0769231
8	51874078	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.233333
8	51874082	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.0588235
8	51896083	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.0681818
8	51896084	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.047619
8	51896113	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.125
8	51896122	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.142857
8	51896125	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.111111
15	51916947	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.166667
15	51917323	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.166667
15	51933584	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.25
15	51933594	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.2
15	51933625	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	51934888	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.636364
15	51945999	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.25
15	51956247	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.5
15	51956300	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.294118
15	51956309	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.333333
15	51956322	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.5
15	51956341	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.416667
19	51970130	A->G	-	ENSG00000256683	ZNF350	protein_coding	Intergenic	.	.	Alu	0.3
19	51970199	A->G	-	ENSG00000256683	ZNF350	protein_coding	Intergenic	.	.	Alu	0.2
19	51970200	A->G	-	ENSG00000256683	ZNF350	protein_coding	Intergenic	.	.	Alu	0.636364
15	51974741	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.214286
15	51974779	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.352941
15	51974818	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.117647
15	51974835	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.333333
15	51978968	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.181818
15	51978990	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.333333
15	51978996	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.214286
15	51981352	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.166667
15	52027216	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.166667
1	52040071	A->G	-	ENSG00000117862	TXNDC12	protein_coding	Intergenic	.	.	Alu	0.333333
1	52040077	A->G	-	ENSG00000117862	TXNDC12	protein_coding	Intergenic	.	.	Alu	0.142857
1	52073745	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.166667
1	52073851	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52076321	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.25
15	52172298	A->G	-	ENSG00000069966	GNB5	protein_coding	Intergenic	.	.	Alu	0.363636
19	52193650	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.214286
19	52193669	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.25
19	52193670	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.4375
19	52193687	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.636364
19	52193703	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	1
19	52193750	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.928571
19	52193753	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.166667
19	52193770	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.571429
19	52193857	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.357143
19	52193910	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.5
19	52193929	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.571429
19	52193930	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.52381
19	52193998	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.0952381
19	52194006	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.0740741
19	52194015	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.0740741
19	52194033	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.115385
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.692308
19	52271784	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.4
19	52271789	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.285714
19	52271813	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.5
19	52271885	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.166667
3	52414872	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.25
3	52414903	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.217391
3	52414951	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.315789
3	52414953	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.55
3	52414959	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.230769
3	52414984	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.142857
1	52441344	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.25
15	52459054	A->G	-	ENSG00000197535	MYO5A	protein_coding	Intergenic	.	.	Alu	0.166667
15	52459067	A->G	-	ENSG00000197535	MYO5A	protein_coding	Intergenic	.	.	Alu	0.153846
3	52475124	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.133333
3	52475147	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.142857
1	52523121	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52531930	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.307692
1	52531984	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.176471
1	52531985	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.333333
1	52531999	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.08
1	52532016	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.230769
1	52532026	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.590909
1	52532034	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	52532039	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.318182
1	52532052	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.142857
1	52532058	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.176471
1	52532061	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.111111
1	52532120	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.117647
15	52562922	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.0689655
15	52563013	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.1
3	52591644	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.25
3	52591657	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.142857
3	52591684	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.214286
19	52618375	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52639617	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	1
19	52639636	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.357143
3	52639647	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.181818
19	52639660	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.142857
3	52639669	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.166667
3	52639672	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.153846
19	52642500	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.461538
15	52643416	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.214286
15	52643424	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.416667
19	52647541	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52647549	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.117647
19	52647555	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.153846
19	52647571	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52688286	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
8	52698482	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1
8	52698509	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	52698514	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.666667
8	52698533	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.06
8	52698534	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0588235
8	52698793	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0337079
8	52698802	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.091954
8	52698828	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.060241
8	52698838	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0923077
8	52698854	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.338983
8	52698862	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.15493
8	52698865	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.03125
8	52698868	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0327869
8	52698885	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0298507
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.4
8	52698909	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.5
8	52698918	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0925926
8	52698923	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0784314
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.666667
8	52698933	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.245614
8	52698963	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.138889
8	52698964	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	52701199	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0588235
8	52701215	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.195122
8	52701220	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.075
8	52701237	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	52701328	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1
8	52701648	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.214286
8	52706401	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.176471
8	52706856	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52706857	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.923077
8	52706889	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.388889
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.5
14	52714633	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.227273
14	52714642	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.764706
14	52714645	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.125
14	52714701	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.0555556
14	52714708	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.075
14	52714716	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.0526316
14	52714723	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.09375
14	52714746	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.0689655
14	52714772	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	1
14	52714775	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.0909091
14	52714787	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.25
14	52714811	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.3
19	52723353	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.666667
19	52723368	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.15
19	52723382	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.375
19	52723395	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.285714
19	52726323	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.153846
19	52924796	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.111111
19	52924799	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.25
19	52924804	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52924844	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52925378	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.0869565
19	52926495	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.444444
19	52926557	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.08
19	52926596	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.1
19	52926605	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.7
19	52926606	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.235294
19	52926622	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.142857
19	52926797	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.3
19	52926886	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.153846
19	52926906	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.105263
19	52926926	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52926940	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.125
19	52926941	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.125
19	52926945	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52926988	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.153846
19	52926995	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.166667
19	52939480	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.454545
19	52939701	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.142857
19	52939706	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.125
19	52939722	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.285714
19	52939726	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
19	52939756	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
19	52940987	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0714286
19	52941014	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.12
19	52941024	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.208333
19	52941054	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.125
19	52941063	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1
19	52941067	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.105263
19	52941080	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0869565
19	52941090	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0967742
19	52941096	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.111111
19	52941150	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.117647
19	52941154	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.285714
19	52941173	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.130435
19	52941195	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1
19	52941200	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.285714
19	52941201	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0952381
19	52941214	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0952381
12	53026006	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.176471
3	53307087	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.272727
3	53308554	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.1
3	53308556	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.1
6	53320193	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.166667
6	53320195	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.2
6	53320202	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.333333
6	53320205	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.307692
6	53320271	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.461538
6	53320309	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.125
6	53320313	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	53320409	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.166667
6	53320448	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.117647
6	53320474	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.571429
6	53320500	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.318182
6	53320503	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.217391
6	53320504	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.130435
6	53320506	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0833333
6	53320507	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0833333
6	53330636	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.193548
6	53330660	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.175439
3	53331041	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53333180	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.157895
3	53333204	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.166667
3	53333278	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53333279	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.5
3	53335311	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.2
3	53335887	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.125
3	53336001	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
X	53385409	A->G	-	ENSG00000072501	SMC1A	protein_coding	Intergenic	.	.	Alu	0.294118
4	53419893	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.1875
4	53419898	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.2
4	53420030	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.296296
4	53420034	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.16129
4	53420036	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.09375
4	53420283	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	53420285	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
4	53420298	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.0769231
4	53420312	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.1875
16	53438723	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.142857
16	53440049	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.2
5	53562975	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.428571
5	53562980	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.416667
5	53563108	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.307692
5	53563135	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.363636
5	53563208	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.181818
5	53605835	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.166667
5	53605893	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	1
5	53605899	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.619048
5	53605920	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.105263
12	53651793	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.2
12	53668127	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	53668339	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	53668400	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.666667
12	53668401	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.5
12	53668444	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.230769
12	53668448	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.2
12	53668498	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	53746616	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.4
2	53746717	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.307692
2	53790163	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.4375
2	53790198	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.181818
2	53884289	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53951168	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.363636
2	53951179	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	53951211	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.238095
2	53951220	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	53951221	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.1
2	53951247	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53951251	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.111111
2	53951259	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.125
2	53951260	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53951265	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53951310	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.315789
2	53951316	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0833333
2	53951333	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	53951354	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	53951355	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.08
2	53951357	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.727273
2	53965291	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.384615
2	53965321	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53965327	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.529412
2	53965396	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.190476
2	53965400	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	53965402	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.157895
2	53965403	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.157895
2	53965489	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.133333
2	53965497	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53965726	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.125
8	53981877	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.2
8	53981891	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.181818
8	53990314	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.333333
8	53990436	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.166667
8	53990473	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.176471
8	53990490	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.181818
8	53990494	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.238095
8	53990562	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.384615
8	53990570	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.2
8	53990628	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.2
8	53993015	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	53993021	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	53993038	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.222222
8	53993085	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	53993176	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.333333
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.454545
8	53993228	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	54032988	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.916667
1	54033043	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.3
1	54033052	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
1	54035696	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
1	54050247	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.0588235
1	54050395	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.130435
1	54050396	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.0909091
1	54050655	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.08
1	54050834	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.142857
1	54051009	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.133333
1	54051122	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
19	54175140	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.2
19	54177434	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.416667
19	54177741	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.125
19	54177864	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.212121
19	54178049	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.21875
19	54178144	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54178191	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.2
19	54178196	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.4
19	54185723	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54185763	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.153846
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54563633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54563647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	54568307	A->G	+	ENSG00000115306	SPTBN1	protein_coding	Intergenic	.	.	Alu	0.105263
1	54647620	A->G	+	ENSG00000184313	MROH7	protein_coding	Intergenic	.	.	Alu	0.2
2	54979163	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.2
14	55058576	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.142857
14	55058712	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.222222
14	55059377	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.137931
14	55059383	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.16129
14	55059407	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0645161
14	55059430	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0512821
14	55275703	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0888889
14	55275745	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0416667
14	55275770	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0487805
14	55275806	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0588235
14	55278711	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.352941
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.259259
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.178571
14	55278859	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.266667
14	55278870	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
14	55278877	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.5
14	55278901	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55278949	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55279042	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.09375
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.891892
14	55279093	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0625
14	55279112	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.113208
14	55279113	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.16
14	55279122	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0253165
14	55279125	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.119048
14	55279127	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0853659
14	55279128	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0243902
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.114286
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.666667
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0684932
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	1
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	1
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
14	55281193	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.4
15	55287057	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.2
15	55287096	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.2
14	55305575	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
5	55326139	A->G	+	ENSG00000039123	MTREX	protein_coding	Intergenic	.	.	Alu	0.181818
18	55376136	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.0810811
18	55376146	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.0851064
18	55376154	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.0681818
18	55376193	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.111111
18	55376194	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.133333
18	55376252	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.0869565
18	55380040	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.272727
18	55380084	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.133333
18	55380085	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.133333
18	55380119	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.117647
18	55391816	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.2
4	55401878	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.3
4	55401968	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.181818
2	55407785	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.142857
2	55407815	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.153846
2	55407882	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.133333
2	55407886	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.176471
2	55407888	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.25
2	55407926	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.142857
2	55407990	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.307692
2	55407997	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.214286
2	55408013	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.2
2	55409878	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.6
4	55412163	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0645161
4	55412170	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0555556
4	55412193	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.117647
4	55412204	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0666667
4	55412218	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.148148
4	55412229	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.48
4	55412235	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.153846
4	55412241	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.111111
4	55412243	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.269231
4	55412244	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0869565
4	55412247	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0869565
4	55412274	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.181818
4	55412290	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.111111
4	55412296	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.166667
4	55412300	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.538462
5	55433053	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	55433054	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.5
5	55433059	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	55433084	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.2
5	55433208	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.333333
5	55433220	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.285714
5	55433245	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.357143
5	55433246	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.0967742
5	55433286	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.0930233
5	55433291	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.179487
5	55433318	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	55433749	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.5
5	55433758	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.666667
5	55433759	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.333333
5	55433881	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.578947
5	55433882	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.947368
5	55433887	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.117647
5	55433990	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.125
5	55434008	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.1875
5	55434009	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.4
5	55434025	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	55434086	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	55435893	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.176471
5	55458702	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	55458704	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	55458767	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.2
5	55458768	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	55458816	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	55458820	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	55472485	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	55472525	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.153846
18	55531080	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.0909091
18	55531096	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.631579
18	55531147	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.307692
18	55531148	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.285714
18	55531149	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.285714
18	55531155	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.466667
18	55531157	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.1875
18	55531178	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.142857
18	55531210	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.714286
18	55531218	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.111111
18	55531235	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.533333
2	55573991	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.0487805
2	55574052	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.115385
2	55574092	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.125
2	55574769	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.214286
2	55574771	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.142857
2	55574883	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.125
2	55575102	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.214286
2	55591215	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.642857
2	55591229	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.181818
2	55595206	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.133333
2	55595217	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.125
2	55595242	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.4
12	55787526	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.25
12	55787565	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55787569	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.222222
12	55787574	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.625
12	55787575	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.266667
12	55787708	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55792460	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0645161
12	55792509	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.2
12	55792510	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.192308
12	55799733	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55799824	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.214286
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55890019	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0681818
8	55890063	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.139535
8	55890067	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.06
8	55890075	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55890198	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55890218	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55890232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55890237	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.228571
8	55891157	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55891167	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55891169	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55891177	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55891194	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.458333
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.68
8	55891241	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.269231
8	55891273	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55896127	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55896172	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.037037
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.363636
8	55896195	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0961538
8	55896257	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0441176
8	55896778	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55896818	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55896819	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55896857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55896879	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55896881	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55904691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55905161	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55905255	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55905265	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55905281	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	1
8	55905285	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55905323	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55905363	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55905399	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.21875
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	55916993	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55917030	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.466667
8	55917034	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55917056	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55917098	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.363636
8	55917131	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55917133	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55917255	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55917260	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55917265	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55917311	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55917325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.545455
8	55917333	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.636364
8	55917384	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55918937	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0512821
8	55922559	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.818182
8	55922567	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.545455
8	55922620	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55922647	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55922682	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.888889
8	55922687	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.529412
8	55922708	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55922717	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.466667
8	55922757	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
5	55945799	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.166667
5	55945850	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.25
4	55960985	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.176471
4	55960986	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.157895
4	55961045	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.416667
4	55961503	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.380952
4	55961509	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.0769231
4	55961575	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.142857
4	55961578	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.142857
4	55961579	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.133333
4	55961644	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.352941
4	55976035	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.65
4	55976040	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.111111
4	55976066	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.111111
4	55976068	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.352941
4	55976102	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.25
7	55985799	A->G	+	ENSG00000146729	NIPSNAP2	protein_coding	Intergenic	.	.	Alu	0.181818
7	55989988	A->G	+	ENSG00000146729	NIPSNAP2	protein_coding	Intergenic	.	.	Alu	0.3
7	55989991	A->G	+	ENSG00000146729	NIPSNAP2	protein_coding	Intergenic	.	.	Alu	0.2
8	56003657	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	56068904	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.25
8	56068914	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.928571
8	56068920	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.142857
8	56068927	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.357143
8	56068973	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.3125
8	56068976	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.125
8	56068991	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.666667
7	56096444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	56096949	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
7	56098576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
7	56098720	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
7	56098721	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
7	56098781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
7	56098790	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
7	56098874	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	56099335	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
12	56306392	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.2
12	56312513	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	1
12	56312516	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	1
12	56313234	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56313246	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.230769
12	56313247	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.153846
12	56313678	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.136364
12	56313682	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.315789
12	56313711	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56313731	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.2
12	56313739	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.181818
12	56313745	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.916667
12	56314096	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.181818
12	56314104	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.266667
12	56314106	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.25
12	56314127	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
16	56443315	A->G	-	ENSG00000167005	NUDT21	protein_coding	Intergenic	.	.	Alu	0.4
16	56443349	A->G	-	ENSG00000167005	NUDT21	protein_coding	Intergenic	.	.	Alu	0.3
12	56536333	A->G	+	ENSG00000076067	RBMS2	protein_coding	Intergenic	.	.	Alu	0.272727
18	56607152	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.3
12	56608977	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.2
12	56609012	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.142857
12	56609076	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.363636
18	56611759	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1
18	56611761	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0810811
18	56611766	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.05
18	56611770	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0384615
18	56611790	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0487805
18	56611791	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0697674
18	56611799	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0754717
18	56611818	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.46
18	56611843	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.37037
18	56611879	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.16
18	56611886	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0666667
18	56611938	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	56611973	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.384615
18	56611987	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.7
18	56612066	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.103448
18	56612099	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.117647
18	56612113	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.666667
18	56612123	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	56612139	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.428571
18	56612140	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.181818
18	56612146	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.294118
12	56685888	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.230769
4	56940106	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.2
15	56971281	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.142857
15	56971294	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.2
15	56998377	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.0909091
15	56998398	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.111111
12	57067979	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.636364
12	57067997	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.363636
12	57068043	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.454545
12	57068052	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.5
15	57098064	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.0769231
15	57098065	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.192308
15	57098070	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.115385
4	57105974	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.117647
4	57106039	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.2
4	57106071	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.125
4	57106106	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.2
15	57148766	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.3
15	57153766	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.2
16	57182675	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.4
16	57182693	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.142857
5	57193539	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	57232881	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.181818
17	57304103	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.35
17	57304104	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.545455
17	57304109	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.105263
17	57304156	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
17	57304192	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.230769
17	57304196	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.214286
17	57304198	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.142857
17	57304199	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
12	57322130	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.363636
12	57322133	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.3
12	57330863	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.615385
12	57330880	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.545455
17	57361546	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.105263
17	57409754	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.135135
17	57409797	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.210526
17	57409845	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.3
17	57409861	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.185185
17	57409887	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.08
17	57409888	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.307692
17	57409914	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.388889
17	57409929	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.208333
17	57409933	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0714286
17	57409958	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0740741
17	57409968	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.222222
12	57420581	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.2
17	57427278	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57427304	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	57427319	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.230769
17	57450457	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.176471
17	57450550	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	57450556	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.133333
17	57450592	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.333333
17	57450626	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.285714
17	57460213	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.181818
17	57460221	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.214286
17	57460239	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.142857
17	57504659	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
17	57504766	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57504793	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.285714
17	57526210	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
3	57567857	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	57567881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	57569430	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	57569711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	57569764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	57578283	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57578300	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.272727
3	57578317	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.333333
3	57578326	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.153846
3	57579041	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.25
3	57579042	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.272727
3	57579068	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.227273
3	57579077	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.304348
3	57579141	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
3	57587132	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3
3	57587133	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.4
3	57591605	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.666667
3	57591649	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
3	57591666	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.333333
17	57597449	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	57597609	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	57597615	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	57612660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	57612664	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	57647155	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.142857
17	57647167	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.125
17	57647173	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
17	57647196	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.142857
17	57647214	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.117647
17	57647227	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.142857
17	57647228	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.190476
17	57647318	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.454545
17	57647338	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.181818
17	57647361	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.097561
17	57647393	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.945946
17	57647394	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.810811
17	57647401	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.097561
17	57647414	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57664264	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.133333
3	57676952	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
3	57676961	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.3
3	57677468	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.272727
3	57677493	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.0714286
3	57677533	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.157895
3	57677551	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.157895
3	57677552	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.315789
3	57677574	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.241379
3	57677596	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.190476
3	57677663	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.111111
3	57677682	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.235294
19	57715185	A->G	+	ENSG00000204519	ZNF551	protein_coding	Intergenic	.	.	Alu	0.153846
19	57715206	A->G	+	ENSG00000204519	ZNF551	protein_coding	Intergenic	.	.	Alu	0.230769
11	57724988	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.133333
11	57730307	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.307692
11	57734069	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.416667
11	57734092	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.214286
11	57734562	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.142857
11	57734572	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.153846
11	57734633	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.133333
11	57748453	A->G	+	ENSG00000233436	BTBD18	protein_coding	Intergenic	.	.	Alu	0.2
11	57748495	A->G	+	ENSG00000233436	BTBD18	protein_coding	Intergenic	.	.	Alu	0.142857
11	57748530	A->G	+	ENSG00000233436	BTBD18	protein_coding	Intergenic	.	.	Alu	0.157895
11	57748533	A->G	+	ENSG00000233436	BTBD18	protein_coding	Intergenic	.	.	Alu	0.157895
19	57750242	A->G	+	ENSG00000269026	AC003006.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	57750247	A->G	+	ENSG00000269026	AC003006.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	57750422	A->G	+	ENSG00000269026	AC003006.1	protein_coding	Intergenic	.	.	Alu	0.166667
3	57762092	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.153846
3	57762115	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.153846
3	57762140	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.142857
3	57762152	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.125
3	57762157	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.5
3	57762190	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.0909091
3	57762191	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.111111
3	57762205	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.12
3	57762215	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.12
3	57762216	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.12
3	57762265	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.153846
3	57762271	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.166667
3	57762275	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.3125
11	57770236	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.142857
11	57770400	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.115385
11	57770444	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.125
11	57770502	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.125
11	57770506	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.133333
11	57770522	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.285714
11	57770532	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.133333
11	57770538	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.125
11	57770559	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.153846
11	57770574	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.181818
11	57770578	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.142857
11	57770585	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.235294
11	57770595	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.133333
3	57775603	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.181818
3	57775609	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.25
3	57775635	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.5
3	57781139	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.3
19	57787861	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.2
3	57793946	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.0555556
19	57798023	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.3
19	57810192	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.181818
19	57810214	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.263158
19	57810215	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.157895
19	57810231	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.111111
19	57810235	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.1
19	57810250	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.153846
19	57811776	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.153846
19	57811853	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.2
19	57811867	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.181818
19	57811868	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.25
19	57811871	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.25
19	57811875	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.153846
19	57811876	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.166667
19	57811908	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.416667
19	57811914	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.142857
3	57855199	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.142857
3	57855200	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.125
3	57855202	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.2
3	57855362	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.0689655
19	57866862	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.125
19	57866864	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3125
19	57866876	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.277778
19	57866917	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57866918	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
19	57866969	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.0909091
19	57866981	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.478261
19	57866992	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.192308
19	57866997	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.0833333
19	57867012	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.411765
19	57871876	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.153846
10	58217026	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.3
10	58217031	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.5
10	58217042	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.272727
10	58217081	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.5
10	58217091	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.266667
10	58217105	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.133333
10	58217113	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.315789
10	58217121	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.3125
10	58217122	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.1875
10	58217128	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.142857
14	58217458	A->G	+	ENSG00000131966	ACTR10	protein_coding	Intergenic	.	.	Alu	0.133333
14	58222690	A->G	+	ENSG00000131966	ACTR10	protein_coding	Intergenic	.	.	Alu	0.25
14	58222720	A->G	+	ENSG00000131966	ACTR10	protein_coding	Intergenic	.	.	Alu	0.142857
14	58250135	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.176471
14	58261320	A->G	-	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.176471
19	58265990	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
19	58266040	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.272727
19	58266085	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.230769
19	58266086	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.357143
19	58267906	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.166667
19	58267936	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.214286
19	58272697	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
19	58275595	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
14	58276960	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.117647
14	58276966	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.235294
14	58277004	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.105263
14	58277084	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.263158
14	58277108	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.105263
14	58277331	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.181818
14	58277374	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.125
14	58277375	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.25
14	58278378	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.142857
19	58314369	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.636364
19	58314371	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.416667
19	58314372	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.166667
19	58314500	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.384615
19	58314506	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.692308
19	58314520	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.1875
20	58314828	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.538462
20	58314829	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.416667
14	58317005	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.272727
14	58317020	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.181818
14	58317072	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.571429
14	58317078	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.166667
20	58325056	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.2
17	58340588	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.272727
17	58340917	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.5
17	58340977	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58340980	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341681	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.625
17	58341687	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58341722	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.157895
17	58341727	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.117647
17	58341750	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58341780	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.3
17	58341782	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341783	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.230769
17	58341785	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.375
17	58341786	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.25
17	58341789	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.133333
17	58341815	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.529412
17	58341830	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.214286
17	58341856	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341861	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.714286
17	58341881	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58341891	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.5
17	58346686	A->G	+	ENSG00000213246	SUPT4H1	protein_coding	Intergenic	.	.	Alu	0.142857
14	58369495	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.133333
14	58374276	A->G	+	ENSG00000258658	AL139021.2	antisense	Intergenic	.	.	Alu	1
14	58374406	A->G	+	ENSG00000258658	AL139021.2	antisense	Intergenic	.	.	Alu	0.2
14	58374435	A->G	+	ENSG00000258658	AL139021.2	antisense	Intergenic	.	.	Alu	0.3
19	58564983	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.333333
19	58565006	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	1
19	58565041	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.714286
19	58565045	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.133333
16	58615825	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.142857
16	58619560	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.142857
20	58684045	A->G	+	ENSG00000254995	STX16-NPEPL1	protein_coding	Intergenic	.	.	Alu	0.2
15	58923904	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.111111
15	58923985	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.166667
15	58924028	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.125
15	58924087	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.166667
15	58926807	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58926841	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58926846	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.214286
15	58930252	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.05
8	59086107	A->G	-	ENSG00000198846	TOX	protein_coding	Intergenic	.	.	Alu	0.142857
8	59086114	A->G	-	ENSG00000198846	TOX	protein_coding	Intergenic	.	.	Alu	0.25
8	59086124	A->G	-	ENSG00000198846	TOX	protein_coding	Intergenic	.	.	Alu	0.285714
17	59204767	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.111111
17	59204907	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.1
17	59274657	A->G	+	ENSG00000153982	GDPD1	protein_coding	Intergenic	.	.	Alu	0.5
11	59583729	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.166667
11	59583740	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.363636
11	59583779	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.214286
11	59583784	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.258065
11	59583809	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.0869565
11	59583810	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.130435
11	59583843	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.148148
11	59583867	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.08
17	59586551	A->G	+	ENSG00000108406	DHX40	protein_coding	Intergenic	.	.	Alu	0.181818
17	59588152	A->G	+	ENSG00000108406	DHX40	protein_coding	Intergenic	.	.	Alu	0.2
11	59592934	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.166667
12	59614882	A->G	+	ENSG00000118596	SLC16A7	protein_coding	Intergenic	.	.	Alu	0.333333
15	59676312	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.1875
15	59676338	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	59739577	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.125
17	59744342	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	59774297	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.285714
17	59774323	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.4
17	59774336	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	59816775	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.153846
17	59816825	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	59901411	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.272727
17	59901769	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.2
17	59901782	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.333333
17	59901835	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.4375
17	59901856	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.136364
17	59901869	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.105263
17	59901898	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.681818
17	59901983	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	59901994	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.416667
17	59901997	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.428571
17	59902003	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.230769
17	59903185	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.3
14	60099938	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.2
14	60099985	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.181818
14	60099990	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.454545
14	60256327	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.1
14	60256382	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0869565
14	60272589	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0952381
8	60518395	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.102564
8	60518470	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.105263
8	60518496	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.142857
8	60518497	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0952381
8	60518535	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.08
8	60518571	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0588235
8	60526692	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60526889	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0689655
8	60586826	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60586829	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60586854	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.111111
17	60616354	A->G	+	ENSG00000170836	PPM1D	protein_coding	Intergenic	.	.	Alu	0.2
5	60961484	A->G	+	ENSG00000164182	NDUFAF2	protein_coding	Intergenic	.	.	Alu	0.2
2	61035863	A->G	+	ENSG00000162928	PEX13	protein_coding	Intergenic	.	.	Alu	0.181818
2	61196213	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.142857
2	61196497	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61196500	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.1875
2	61235464	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.333333
2	61263292	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.25
2	61263298	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.181818
2	61263309	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.153846
2	61269218	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.117647
2	61269293	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61269301	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.125
2	61269321	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.25
2	61269369	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.277778
11	61319466	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.0714286
11	61319499	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	61319543	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.111111
11	61319547	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.111111
11	61319596	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.117647
11	61319620	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.25
11	61319636	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.130435
11	61319694	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.190476
11	61319697	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	61319702	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.363636
11	61319703	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.73913
11	61320338	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.105263
2	61359896	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.105263
2	61359998	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.142857
2	61360003	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.166667
2	61360012	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.142857
2	61360038	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.153846
5	61378916	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.5
5	61378925	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.176471
5	61378938	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.611111
5	61378960	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.125
5	61378965	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.125
5	61379031	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61379034	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61379106	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.416667
5	61379113	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.428571
5	61379122	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.210526
5	61382725	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.166667
5	61382744	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61382793	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.142857
2	61401483	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.3
2	61401493	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.272727
2	61401792	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.25
2	61417827	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.0909091
2	61440655	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.133333
2	61440656	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.214286
2	61454652	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.181818
2	61454687	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.142857
2	61454786	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.181818
2	61467682	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61502857	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.5
2	61503243	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.375
2	61503246	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.666667
2	61511973	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.285714
2	61511974	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61512002	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61527957	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61528023	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61528055	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	61528065	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.15
2	61528126	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.294118
14	61742631	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.125
14	61742654	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.153846
14	61742676	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.166667
14	61742687	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.117647
14	61742700	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0909091
14	61742753	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0769231
2	61881999	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.153846
2	61882070	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	61882071	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.238095
2	61882588	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	61882637	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.117647
2	61882706	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.642857
2	61882712	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.4375
2	61882714	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.133333
17	61905607	A->G	-	ENSG00000108506	INTS2	protein_coding	Intergenic	.	.	Alu	0.2
17	61998660	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.173913
17	61998696	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	61998697	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.291667
17	61998703	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0833333
17	61998721	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0689655
17	61998724	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.413793
17	61998738	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0740741
17	61998744	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0769231
17	61998746	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.08
17	61998815	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.111111
17	61998817	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.222222
17	61998871	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	61998872	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	61998880	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.428571
17	61998885	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.6875
2	62004072	A->G	+	ENSG00000173163	COMMD1	protein_coding	Intergenic	.	.	Alu	0.3
17	62020606	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.105263
17	62039557	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0740741
12	62146483	A->G	-	ENSG00000198673	FAM19A2	protein_coding	Intergenic	.	.	Alu	0.4
12	62146485	A->G	-	ENSG00000198673	FAM19A2	protein_coding	Intergenic	.	.	Alu	0.2
5	62323402	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.0689655
5	62330126	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.153846
12	62330692	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0645161
12	62330823	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0487805
12	62330836	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0526316
5	62331467	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.166667
5	62331468	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.153846
12	62331907	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.375
12	62331931	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.1
12	62331932	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.1
12	62332018	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62332043	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.130435
12	62332053	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.272727
12	62332060	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0769231
17	62475007	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62496907	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	1
17	62497071	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.117647
12	62502334	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.166667
12	62502335	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.133333
12	62502346	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.125
12	62513759	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.846154
12	62513761	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.25
12	62513769	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.272727
12	62513835	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.8
17	62518457	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.217391
17	62518490	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0731707
17	62518548	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	62518559	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62518563	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.125
17	62518585	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.285714
17	62518586	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.107143
17	62518626	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0909091
18	62531819	A->G	+	ENSG00000141664	ZCCHC2	protein_coding	Intergenic	.	.	Alu	0.142857
11	62619629	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.529412
11	62619639	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.428571
11	62619669	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.333333
18	62727494	A->G	+	ENSG00000081913	PHLPP1	protein_coding	Intergenic	.	.	Alu	0.153846
18	62761377	A->G	+	ENSG00000081913	PHLPP1	protein_coding	Intergenic	.	.	Alu	0.4
18	62761378	A->G	+	ENSG00000081913	PHLPP1	protein_coding	Intergenic	.	.	Alu	0.181818
11	62820584	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.105263
11	62820589	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.105263
11	62820618	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62820660	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.466667
11	62820681	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.230769
11	62820685	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.214286
11	62820715	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62820776	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.214286
11	62820782	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.133333
11	62822357	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.454545
11	62823197	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0909091
11	62823273	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62823307	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.105263
11	62823356	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.3125
11	62823362	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.142857
11	62823375	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.333333
11	62887582	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.272727
11	62887684	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.25
8	63196307	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.166667
8	63196397	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.133333
8	63196468	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.125
8	63196477	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.0869565
15	63229557	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63229660	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.133333
15	63229661	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.133333
15	63229702	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.176471
10	63250072	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.176471
10	63254970	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.115385
10	63292042	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63292066	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.416667
10	63292067	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.583333
10	63292075	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.25
18	63418470	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.181818
10	63424599	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63454395	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	63454496	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63493329	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63493354	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.352941
10	63493358	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63493359	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.3125
10	63493446	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.272727
10	63493450	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63493528	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.333333
10	63493532	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63493533	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.214286
10	63510095	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63510142	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.416667
10	63510284	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.5
14	63530381	A->G	-	ENSG00000154001	PPP2R5E	protein_coding	Intergenic	.	.	Alu	0.153846
14	63530426	A->G	-	ENSG00000154001	PPP2R5E	protein_coding	Intergenic	.	.	Alu	0.181818
14	63530724	A->G	-	ENSG00000154001	PPP2R5E	protein_coding	Intergenic	.	.	Alu	0.2
14	63530752	A->G	-	ENSG00000154001	PPP2R5E	protein_coding	Intergenic	.	.	Alu	0.153846
14	63530753	A->G	-	ENSG00000154001	PPP2R5E	protein_coding	Intergenic	.	.	Alu	0.230769
14	63530820	A->G	-	ENSG00000154001	PPP2R5E	protein_coding	Intergenic	.	.	Alu	0.2
15	63545701	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.666667
15	63545714	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.263158
15	63545715	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.272727
15	63545736	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.176471
15	63545761	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0714286
15	63545762	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.16
15	63545785	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63545793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.222222
15	63545794	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.12
15	63545795	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.08
15	63545806	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63545824	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0714286
15	63545850	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.551724
15	63545860	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.115385
15	63545891	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63545896	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.416667
15	63547458	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.384615
15	63547474	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.08
15	63547475	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.12
15	63547491	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.136364
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63547636	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	63547655	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.25
15	63547923	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.208333
15	63547931	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0666667
15	63547963	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.133333
15	63547979	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.157895
15	63547990	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0555556
15	63548000	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.108108
15	63548026	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.121212
15	63548031	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	1
15	63548035	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	63548071	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	63548234	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.181818
15	63548247	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.2
17	63557388	A->G	+	ENSG00000136485	DCAF7	protein_coding	Intergenic	.	.	Alu	0.181818
12	63588850	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.2
12	63588875	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.0909091
12	63588882	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.347826
12	63588918	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.642857
12	63589003	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.181818
12	63589020	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.125
20	63601620	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.133333
20	63613029	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.105263
20	63613030	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	63642824	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.2
17	63642887	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.142857
17	63642891	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.642857
17	63642892	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.333333
17	63642924	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.3125
17	63643032	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.25
17	63662309	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.166667
17	63662327	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.181818
17	63662356	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.2
17	63662402	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.181818
17	63670462	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.153846
15	63675934	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.133333
15	63675993	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.142857
15	63675996	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.421053
15	63676000	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.117647
15	63676001	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.3125
15	63676058	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.1875
15	63676064	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.285714
6	63678172	A->G	+	ENSG00000118482	PHF3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63693346	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.5
15	63720196	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63720255	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
17	63724322	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.133333
17	63725414	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.272727
17	63725420	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.2
17	63725441	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.181818
17	63725477	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.25
17	63725530	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.384615
17	63725531	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.615385
17	63725534	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.615385
17	63770085	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.363636
17	63770100	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.666667
17	63772392	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.230769
17	63772525	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.2
17	63772526	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.357143
15	63773799	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.6
15	63787024	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.3125
15	63789357	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63789362	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.272727
15	63789363	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.636364
15	63789541	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.230769
15	63806269	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.4
9	63819075	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	63840238	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.4
17	63840420	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.5
17	63840446	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.105263
17	63840453	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.764706
15	64098439	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64098466	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64098537	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64098610	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.1
15	64098611	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64100324	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.357143
15	64100330	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.15625
15	64100347	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64100423	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	64100435	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.25
15	64100453	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.315789
15	64100479	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	64100480	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64100507	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.1
15	64100526	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.1
15	64108894	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.545455
15	64108900	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64108909	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.125
15	64108963	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64109121	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.157895
15	64109187	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	1
15	64109206	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.0645161
15	64109209	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.09375
15	64109226	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	64109252	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.333333
15	64109275	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.111111
2	64139377	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.166667
2	64139404	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.3
11	64187894	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	1
7	64345481	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.136364
7	64345513	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.380952
7	64345514	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.285714
7	64345519	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.111111
7	64345542	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.166667
7	64345543	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.333333
7	64345567	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.461538
7	64345568	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.692308
7	64345569	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.166667
7	64345655	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.0909091
7	64345659	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.409091
7	64345679	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.1
15	64359615	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64359619	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
12	64407260	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.4
12	64463312	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.583333
12	64463430	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.454545
12	64463449	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.176471
12	64463492	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.266667
12	64463517	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.266667
12	64463542	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.153846
12	64463544	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64465996	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.230769
15	64469116	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.285714
15	64469142	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.153846
15	64469152	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.166667
15	64469182	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.272727
15	64469183	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.181818
15	64537457	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.416667
2	64546918	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.3
2	64547865	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.181818
17	64627279	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.272727
17	64638245	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.153846
17	64638324	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.3
17	64646163	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.3
17	64646203	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.230769
17	64646481	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.181818
17	64646576	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.181818
17	64646577	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.416667
17	64650287	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.178571
17	64650296	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.52
17	64655366	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.25
17	64655367	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.125
17	64655386	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.125
17	64655395	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.285714
17	64655396	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.241379
17	64655402	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.166667
17	64655451	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.133333
17	64655471	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.214286
17	64655491	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.333333
7	64699907	A->G	+	ENSG00000196247	ZNF107	protein_coding	Intergenic	.	.	Alu	0.2
5	64756699	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	64757966	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.15
5	64758005	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.125
5	64758037	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.142857
11	64794916	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.2
1	64940413	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.25
1	64940445	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.176471
1	64951863	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.105263
1	64951876	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.227273
1	64951913	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.470588
1	64953784	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.0350877
15	64956425	A->G	-	ENSG00000166839	ANKDD1A	protein_coding	Intergenic	.	.	Alu	0.5
14	65037242	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.117647
14	65037378	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.181818
14	65052000	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.909091
14	65052001	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.454545
14	65059139	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.166667
14	65059931	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.25
14	65059972	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.166667
14	65067657	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.176471
14	65067746	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.173913
11	65101646	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.25
11	65101695	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.2
2	65101943	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65101956	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65101981	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.318182
2	65125932	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.235294
2	65125934	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65127473	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65127475	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.461538
2	65127487	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.307692
2	65127544	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.454545
11	65508454	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
15	65533931	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.2
15	65541975	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.166667
15	65541976	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.583333
15	65542020	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.4
15	65542364	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.125
15	65542376	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.2
15	65542390	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.25
15	65542397	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.538462
15	65542453	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.142857
15	65542507	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.6
15	65542820	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.454545
15	65542821	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.307692
15	65542920	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.133333
15	65542927	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.142857
15	65606550	A->G	-	ENSG00000138614	INTS14	protein_coding	Intergenic	.	.	Alu	0.4
15	65707913	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.4
15	65708135	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65708234	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.285714
15	65728612	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65728621	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
8	65730283	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.166667
8	65730286	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	65730345	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.25
8	65730348	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.25
8	65730349	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	65730350	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.3
8	65730356	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.3
8	65730459	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.25
8	65736700	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.3
15	65746554	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65746632	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65746636	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65746652	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
11	65774442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
15	65774937	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65774938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65774940	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65774964	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
11	65897394	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.133333
11	65974466	A->G	+	ENSG00000175467	SART1	protein_coding	Intergenic	.	.	Alu	0.08
11	65974467	A->G	+	ENSG00000175467	SART1	protein_coding	Intergenic	.	.	Alu	0.166667
11	65974503	A->G	+	ENSG00000175467	SART1	protein_coding	Intergenic	.	.	Alu	0.0952381
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.105263
7	65981143	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.5
7	65981155	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.108108
7	65981343	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.285714
5	66097211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	66149098	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.166667
5	66149166	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.136364
5	66149170	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.380952
5	66149233	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	66149262	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	66149332	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.08
7	66166345	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
12	66194709	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.5
12	66194762	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.25
12	66202517	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
3	66297277	A->G	+	ENSG00000144741	SLC25A26	protein_coding	Intergenic	.	.	Alu	0.2
3	66297278	A->G	+	ENSG00000144741	SLC25A26	protein_coding	Intergenic	.	.	Alu	0.2
2	66558159	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.166667
11	66629807	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66629960	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0789474
11	66629970	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0689655
11	66629984	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.121212
11	66629988	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.151515
11	66632772	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66635027	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.48
11	66635032	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.08
11	66635045	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0869565
11	66635105	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	1
11	66635117	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.138889
11	66635127	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0540541
11	66635133	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0487805
11	66635140	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66635153	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66635154	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.208333
11	66635167	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.259259
11	66635187	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.157895
11	66635239	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66635248	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66635249	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.344828
11	66635261	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.793103
11	66635263	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0869565
11	66635353	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.470588
11	66635360	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.527273
11	66635375	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.030303
11	66635414	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0243902
11	66635423	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.207317
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.547619
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.597561
11	66635436	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.107527
11	66635439	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0217391
11	66635449	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0212766
11	66635454	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.666667
11	66635467	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.151163
11	66635481	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0632911
11	66635494	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0722892
11	66635503	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0416667
11	66635507	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0481928
11	66635521	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0289855
11	66635542	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0416667
11	66635567	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66635569	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.148148
11	66635643	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0961538
11	66635644	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0384615
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.418182
11	66635652	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0363636
11	66635659	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.09375
11	66635692	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0545455
11	66635712	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0454545
11	66635720	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66635737	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0363636
11	66635738	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0377358
11	66635739	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0363636
11	66635747	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0612245
11	66635754	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.06
11	66635770	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66635772	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.215686
11	66635774	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66635780	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0789474
11	66636109	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66657467	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66657472	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66657498	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66657506	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66657536	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.214286
11	66657562	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.5
11	66657568	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66657598	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.7
7	66658426	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.166667
11	66670763	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
11	66670765	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.181818
11	66670768	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
11	66671805	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
11	66671841	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
11	66672145	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.0952381
11	66672151	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.32
11	66672152	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.36
11	66672220	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.130435
11	66672221	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	1
11	66672229	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.454545
11	66672230	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.15
11	66672231	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.363636
11	66672281	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.25
11	66672289	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.235294
11	66672295	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.25
11	66672299	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.166667
11	66672307	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.333333
11	66672316	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.153846
11	66672325	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.266667
11	66672331	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.142857
11	66672576	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.4
11	66672771	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.166667
16	66716610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
8	66716989	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.181818
8	66717130	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.2
8	66717272	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.428571
8	66717368	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.181818
8	66717379	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.153846
8	66717449	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.222222
16	66738346	A->G	-	ENSG00000135720	DYNC1LI2	protein_coding	Intergenic	.	.	Alu	0.2
16	66738347	A->G	-	ENSG00000135720	DYNC1LI2	protein_coding	Intergenic	.	.	Alu	0.846154
16	66738376	A->G	-	ENSG00000135720	DYNC1LI2	protein_coding	Intergenic	.	.	Alu	0.153846
16	66738455	A->G	-	ENSG00000135720	DYNC1LI2	protein_coding	Intergenic	.	.	Alu	0.7
8	66740668	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.2
8	66740674	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.4
8	66740742	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.214286
8	66740764	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.142857
8	66740786	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.3
8	66740852	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.142857
7	66741883	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.571429
7	66741903	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0740741
7	66741948	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.206897
7	66742030	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	66742036	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.285714
7	66742057	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66743143	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66743146	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.333333
7	66743148	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.214286
7	66743196	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.625
7	66743213	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66743386	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.363636
7	66743425	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66743451	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66743454	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.285714
7	66744609	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
8	66828086	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.2
8	66828106	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.2
1	66936466	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.25
1	66936494	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.214286
1	66936495	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.307692
1	66936501	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.277778
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.315789
1	66936737	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936739	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	66936745	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0416667
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.347826
1	66936751	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.26087
1	66936784	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.151515
1	66936789	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.272727
1	66936792	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.263158
1	66936812	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0416667
1	66936813	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.428571
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	1
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.578947
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.75
1	66936919	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	1
1	66936920	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0816327
1	66936927	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.117647
1	66936944	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.102041
1	66936949	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	66937330	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.05
1	66937353	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.37037
1	66937355	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.103448
1	66937372	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.153846
1	66937377	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	66937464	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	66937465	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	66937470	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0454545
1	66937505	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.183673
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1
1	66975371	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.117647
1	66975420	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.307692
14	67008199	A->G	+	ENSG00000171723	GPHN	protein_coding	Intergenic	.	.	Alu	0.8
14	67010441	A->G	+	ENSG00000171723	GPHN	protein_coding	Intergenic	.	.	Alu	0.2
14	67010461	A->G	+	ENSG00000171723	GPHN	protein_coding	Intergenic	.	.	Alu	0.214286
8	67103575	A->G	+	ENSG00000104218	CSPP1	protein_coding	Intergenic	.	.	Alu	0.3
11	67125543	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.25
11	67125837	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.307692
11	67125865	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67125884	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3
11	67126026	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.111111
11	67126099	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	67126139	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.176471
11	67126201	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.272727
11	67126234	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3
11	67141536	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.0833333
11	67156040	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67156101	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.153846
11	67156128	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.125
11	67156169	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.133333
11	67156173	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.105263
11	67184239	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.166667
11	67184329	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	67188271	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	67188688	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.217391
17	67191634	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.136364
17	67191679	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.777778
17	67191684	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.272727
17	67191689	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.105263
17	67191724	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.0833333
17	67195989	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.1
17	67195990	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.1
17	67196045	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.136364
17	67196111	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.470588
17	67196125	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.1
17	67196127	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67206978	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.166667
17	67207045	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67207050	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.3
11	67228513	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.416667
7	67273720	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	67295505	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.133333
11	67295593	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.363636
11	67295657	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.375
11	67295668	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.166667
7	67304232	A->G	-	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.416667
7	67312534	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
14	67315415	A->G	-	ENSG00000072415	MPP5	protein_coding	Intergenic	.	.	Alu	0.4
8	67327378	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.222222
8	67327385	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.176471
8	67327414	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.15
8	67335203	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
8	67335234	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	67335244	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.111111
17	67351843	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67351965	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.428571
17	67351969	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.384615
17	67351973	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.214286
17	67351975	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67352014	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67353404	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.6
17	67353432	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.454545
17	67353464	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67353468	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.230769
17	67354727	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67354745	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67354755	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.266667
17	67354862	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.230769
17	67354866	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0714286
17	67354868	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0740741
17	67354873	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354878	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.115385
17	67354890	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0869565
17	67354943	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.461538
17	67354946	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.166667
17	67354986	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.214286
17	67355178	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.174603
17	67355224	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0961538
17	67355229	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.188679
17	67355230	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.2
17	67355240	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0930233
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.377778
17	67355265	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.046875
17	67355268	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0322581
17	67355269	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0327869
17	67355305	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0877193
1	67396947	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	67417574	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	67417613	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.307692
16	67566242	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.230769
16	67566248	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.285714
16	67566249	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.5
16	67566317	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.235294
16	67566318	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.277778
16	67566343	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.15
16	67566348	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67566350	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.0952381
16	67566354	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.105263
16	67566403	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.173913
16	67566459	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67566657	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.0769231
16	67566755	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.136364
16	67566761	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.473684
16	67566786	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.777778
16	67566832	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.117647
16	67566833	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.117647
16	67566845	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.285714
16	67566976	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67566977	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67567077	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67567080	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67577230	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.157895
16	67577231	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.277778
16	67577239	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.181818
16	67577255	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.142857
16	67577270	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	1
16	67577296	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.230769
16	67591173	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.230769
16	67591186	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.272727
16	67594299	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67594305	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67602766	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.181818
14	67672414	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.166667
17	67876551	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.25
17	67876610	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.25
17	67876620	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67876738	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.153846
17	67876763	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.214286
17	67876793	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.545455
17	67876794	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.25
17	67882877	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67883058	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67883126	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.363636
17	67883131	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.5
10	67890769	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.473684
10	67890792	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.333333
10	67890845	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.384615
10	67890920	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.214286
10	67890932	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.105263
10	67896633	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67896634	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
17	67897054	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.133333
17	67897072	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.352941
17	67897073	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.333333
17	67897078	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.35
17	67897103	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.1875
17	67897121	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.230769
17	67897140	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.333333
15	68059534	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.166667
11	68061300	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.4
11	68080548	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.272727
15	68119324	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	68119325	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	68123903	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
17	68123912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	68123925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
17	68123945	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
15	68138039	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.230769
16	68201837	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.357143
16	68201864	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.166667
16	68201870	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.181818
16	68201873	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.272727
2	68202497	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.15625
2	68202527	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.113636
2	68202563	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0961538
2	68202670	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0540541
2	68202671	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0512821
2	68202875	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	68202900	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.333333
2	68202908	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	68202914	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	68202941	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.111111
2	68202959	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.102564
2	68202967	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.111111
11	68204712	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.3
11	68204754	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.5
2	68205328	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0810811
2	68205354	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	68205379	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	68205380	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.115385
2	68205381	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	68205437	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.1
2	68205445	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.111111
2	68205451	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.142857
2	68205500	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.210526
2	68205503	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.227273
2	68205531	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.133333
11	68209964	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.142857
2	68246142	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	1
2	68246151	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	1
2	68246171	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.16129
2	68246186	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	68246199	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.290323
2	68246212	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.321429
2	68246213	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.333333
2	68246239	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.411765
2	68246243	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.108108
2	68246291	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.16
2	68246295	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.36
2	68246345	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.608696
2	68246346	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.425532
10	68367509	A->G	-	ENSG00000204130	RUFY2	protein_coding	Intergenic	.	.	Alu	0.25
10	68399272	A->G	-	ENSG00000204130	RUFY2	protein_coding	Intergenic	.	.	Alu	0.25
11	68471027	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.148148
11	68471028	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0625
11	68477579	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.2
11	68477619	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.3
11	68482161	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0606061
11	68482185	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0606061
11	68485936	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.733333
11	68485937	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.875
11	68486403	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.142857
11	68486451	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.133333
11	68493988	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.241379
11	68494348	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.137931
10	68497646	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.272727
10	68497713	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.25
10	68497754	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.4
10	68497755	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.142857
11	68533458	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.133333
11	68533594	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.217391
11	68533601	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0869565
11	68533620	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.2
11	68533646	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.133333
11	68533654	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.133333
11	68563123	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.272727
12	68613151	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.107143
12	68613184	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68613239	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68613240	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.181818
12	68613348	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0571429
12	68623751	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.2
12	68637326	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68637365	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0789474
12	68637396	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0526316
12	68637401	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.139535
12	68637402	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0666667
12	68637414	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0384615
12	68637422	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.05
12	68637433	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68637436	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.047619
12	68637437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.116279
12	68637438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.195122
12	68637439	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0454545
12	68637442	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0444444
12	68637450	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.122449
12	68637454	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.217391
12	68637466	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.172414
12	68637476	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.121212
12	68637477	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.181818
12	68637512	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.148936
12	68637517	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.40625
12	68637518	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1875
12	68637587	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
10	68760614	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.235294
10	68760652	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.133333
10	68760666	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.368421
10	68760671	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.296296
10	68760677	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.107143
10	68760680	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.178571
10	68760681	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.0769231
10	68760743	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.3125
10	68760744	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.533333
10	68760770	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.25
11	68769313	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.142857
11	68769353	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.5
11	68769369	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.2
10	68920824	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	1
10	68920838	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.125
10	68920846	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.6
10	68920847	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.6
10	68920851	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.4
10	68975926	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.153846
10	68975928	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.166667
10	68975929	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.25
10	68976144	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.25
10	68976152	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.153846
3	69075860	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.142857
3	69075864	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.153846
3	69075872	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.230769
3	69075903	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.153846
3	69075904	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.307692
3	69075907	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.384615
3	69075908	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.230769
3	69075910	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.153846
3	69075924	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.2
3	69076695	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.307692
14	69136213	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.2
14	69136214	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.2
14	69136227	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.2
14	69136254	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.2
10	69151331	A->G	+	ENSG00000122958	VPS26A	protein_coding	Intergenic	.	.	Alu	0.176471
10	69151332	A->G	+	ENSG00000122958	VPS26A	protein_coding	Intergenic	.	.	Alu	0.235294
3	69215430	A->G	-	ENSG00000114541	FRMD4B	protein_coding	Intergenic	.	.	Alu	0.181818
3	69215447	A->G	-	ENSG00000114541	FRMD4B	protein_coding	Intergenic	.	.	Alu	0.4
12	69244997	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0816327
12	69250764	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.113636
16	69354824	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.636364
16	69354835	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.25
16	69354851	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.454545
16	69381767	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.166667
12	69540132	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.125
12	69545503	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.181818
12	69545541	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.25
12	69545546	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.1875
12	69545570	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.105263
12	69545610	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.1875
16	69571106	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69598319	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.111111
16	69598335	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.214286
16	69598893	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1875
16	69598894	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.117647
16	69609948	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0740741
7	69625802	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.178571
7	69625803	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.107143
2	69628225	A->G	-	ENSG00000115977	AAK1	protein_coding	Intergenic	.	.	Alu	0.25
16	69643070	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.08
16	69643146	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0869565
16	69661422	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69807684	A->G	+	ENSG00000198373	WWP2	protein_coding	Intergenic	.	.	Alu	0.272727
16	69815590	A->G	+	ENSG00000198373	WWP2	protein_coding	Intergenic	.	.	Alu	0.333333
16	69815625	A->G	+	ENSG00000198373	WWP2	protein_coding	Intergenic	.	.	Alu	0.181818
16	69815631	A->G	+	ENSG00000198373	WWP2	protein_coding	Intergenic	.	.	Alu	0.2
16	69815666	A->G	+	ENSG00000198373	WWP2	protein_coding	Intergenic	.	.	Alu	0.230769
16	69815707	A->G	+	ENSG00000198373	WWP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	69928685	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.333333
2	69928766	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.25
2	69928775	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.222222
2	69928785	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.277778
2	69928790	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.5
2	69928803	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.15
16	69995493	A->G	-	ENSG00000226232	NPIPB14P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
16	69999929	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.176471
16	70010409	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.230769
16	70035523	A->G	-	ENSG00000255185	PDXDC2P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
16	70035529	A->G	-	ENSG00000255185	PDXDC2P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
X	70137877	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	70137878	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.111111
X	70137904	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.230769
X	70137931	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.272727
X	70137947	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.230769
X	70138015	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	70138016	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.105263
X	70138056	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.357143
X	70138290	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.153846
X	70138366	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.153846
X	70139090	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.2
1	70163282	A->G	-	ENSG00000066557	LRRC40	protein_coding	Intergenic	.	.	Alu	0.181818
1	70163359	A->G	-	ENSG00000066557	LRRC40	protein_coding	Intergenic	.	.	Alu	0.2
1	70163360	A->G	-	ENSG00000066557	LRRC40	protein_coding	Intergenic	.	.	Alu	0.181818
7	70173227	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
7	70173281	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
7	70173289	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.181818
7	70191799	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.357143
7	70191806	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.235294
7	70191822	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.363636
7	70191947	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.545455
7	70191952	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.230769
7	70207803	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.166667
7	70207864	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.352941
7	70207890	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.230769
7	70207891	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.384615
7	70207896	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.133333
7	70213405	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.153846
2	70217414	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.047619
2	70219544	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.105263
2	70219596	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.294118
2	70219599	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.5625
2	70219844	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.0909091
2	70219850	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.26087
2	70219852	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.4
2	70219869	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.125
2	70238049	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.4
2	70238117	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.285714
2	70238382	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.08
2	70238386	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.0909091
2	70238399	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.173913
2	70238403	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.173913
2	70238409	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.136364
2	70238435	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.125
2	70246088	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
12	70254861	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.142857
12	70283386	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.2
12	70283447	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.4
1	70290620	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.142857
9	70308436	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.2
9	70308473	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.333333
9	70308515	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.272727
16	70318271	A->G	+	ENSG00000157349	DDX19B	protein_coding	Intergenic	.	.	Alu	0.166667
8	70351724	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.2
16	70361975	A->G	+	ENSG00000260537	AC012184.2	protein_coding	Intergenic	.	.	Alu	0.2
16	70362159	A->G	+	ENSG00000260537	AC012184.2	protein_coding	Intergenic	.	.	Alu	0.2
10	70413397	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	Intergenic	.	.	Alu	0.5
5	70439341	A->G	+	ENSG00000226259	GTF2H2B	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
5	70440058	A->G	+	ENSG00000226259	GTF2H2B	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
5	70440063	A->G	+	ENSG00000226259	GTF2H2B	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.285714
5	70440065	A->G	+	ENSG00000226259	GTF2H2B	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	70440138	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
7	70440183	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.153846
7	70440210	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.125
7	70543461	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.181818
7	70543504	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
14	70924066	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.272727
14	70924078	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.153846
14	70924098	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.357143
14	70924101	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.2
14	70924111	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.416667
X	71057739	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.166667
X	71057789	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.4
X	71057946	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.3
3	71085287	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.25
3	71085291	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.357143
3	71085349	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	71085351	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.15
3	71085353	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.588235
X	71138743	A->G	+	ENSG00000184634	MED12	protein_coding	Intergenic	.	.	Alu	0.0740741
3	71188500	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.3
3	71188517	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71233564	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	71266374	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71266443	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71266444	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71266445	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71267908	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.08
3	71267935	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	71267941	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.266667
3	71267942	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.375
3	71267966	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.684211
3	71267982	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.285714
3	71267987	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.714286
3	71268229	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71268231	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.25
3	71268255	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.296296
3	71277011	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.0952381
3	71277026	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.0952381
3	71277056	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.0952381
3	71277097	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.2
3	71277123	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.357143
3	71277163	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.366667
3	71277164	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.1
3	71277187	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.0833333
3	71291813	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.111111
3	71291823	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	71313171	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	71313198	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.125
3	71313331	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.6
3	71313332	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.6
3	71343708	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	1
3	71343761	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.111111
3	71343762	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.111111
3	71343801	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.7
3	71343802	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.4
2	71346950	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.166667
14	71356611	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.117647
14	71373504	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.454545
14	71373505	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.363636
2	71386219	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.102564
2	71386254	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.135135
X	71391060	A->G	+	ENSG00000147133	TAF1	protein_coding	Intergenic	.	.	Alu	0.181818
14	71403344	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
14	71403345	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
3	71404391	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	71404394	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	71404400	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
X	71411394	A->G	+	ENSG00000147133	TAF1	protein_coding	Intergenic	.	.	Alu	0.333333
14	71440288	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.333333
14	71440289	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	1
14	71440295	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.818182
14	71440415	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
14	71440433	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.655172
14	71440443	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.133333
14	71440446	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.36
14	71440498	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.181818
14	71440499	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0625
14	71440500	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.3
14	71440528	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.394737
14	71440563	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.55
14	71441985	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
14	71442046	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.08
14	71442052	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.25
14	71442058	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.08
14	71442062	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0714286
14	71453803	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.833333
14	71453808	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.772727
14	71453843	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
14	71453844	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71453847	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.571429
14	71453874	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
14	71453879	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0769231
14	71453890	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.115385
14	71453896	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.285714
14	71453900	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.136364
14	71453927	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71453929	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.533333
14	71453940	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.235294
14	71472958	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.133333
14	71480506	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.3
14	71480507	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.272727
14	71480540	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.166667
14	71480575	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.615385
14	71480576	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.75
14	71480597	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.384615
14	71480600	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.1875
14	71480602	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.105263
14	71480615	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.208333
14	71480641	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.185185
14	71480642	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.222222
14	71480668	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.238095
14	71480677	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.166667
14	71480687	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.333333
14	71480712	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0869565
14	71480750	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0740741
14	71495794	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71495973	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.190476
5	71504126	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.2
5	71546460	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.125
5	71546462	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.2
5	71546465	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.117647
5	71546497	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.384615
5	71546529	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.272727
X	71549525	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.125
X	71549643	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.153846
3	71558591	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.238095
3	71558606	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	71558623	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	71558641	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.173913
3	71558659	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.210526
3	71558662	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	71558663	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	71558721	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71558769	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.344828
12	71661555	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.214286
12	71661620	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
12	71661642	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0833333
12	71661654	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.107143
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.32
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.375
12	71661747	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.12
12	71661753	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0769231
13	71756195	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.2
12	71774381	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0857143
12	71774509	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.108108
12	71774530	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0857143
12	71774534	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0588235
3	71776450	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.25
3	71776456	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.133333
3	71776493	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.176471
3	71776574	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.153846
3	71776620	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.272727
16	71804185	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.4
16	71804220	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.153846
13	71817912	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.2
13	71817917	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.2
13	71817952	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.230769
13	71817953	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.230769
13	71840084	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.230769
13	71840085	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.153846
12	71850512	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0740741
12	71850525	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.157895
12	71850530	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.25
12	71850546	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.95
12	71850552	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.869565
12	71850554	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.571429
12	71850558	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.192308
12	71850777	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.111111
12	71850829	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0645161
12	71850864	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.538462
12	71850866	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.538462
12	71850872	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.206897
12	71850888	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.2
12	71850893	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.115385
12	71863404	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.117647
16	71898196	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.153846
16	71898497	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.105263
16	71898528	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.0769231
16	71898537	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	71898602	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.103448
16	71900046	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	71900118	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.272727
16	71900123	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.461538
16	71910485	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.181818
7	71963578	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	71979938	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	71980015	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.384615
7	72015500	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.25
11	72061563	A->G	-	ENSG00000137497	NUMA1	protein_coding	Intergenic	.	.	Alu	0.538462
11	72061564	A->G	-	ENSG00000137497	NUMA1	protein_coding	Intergenic	.	.	Alu	0.769231
7	72218007	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	72218023	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.5
7	72218026	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.4
7	72247431	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.8
3	72416406	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0869565
3	72416442	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.352941
3	72416657	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0714286
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.266667
3	72416695	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.1875
3	72416696	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.233333
3	72416701	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.205882
3	72416710	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0810811
15	72483908	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.1
15	72483916	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.111111
15	72483917	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.222222
15	72483925	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72484020	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	72484026	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.157895
15	72484053	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.176471
15	72489192	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0625
15	72491057	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72505830	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72505836	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72506170	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72506171	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.102564
15	72506229	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0612245
15	72506243	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.465116
15	72506291	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	72506292	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.216216
15	72506295	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0540541
15	72510533	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	72510557	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72510567	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72510590	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72510616	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.255814
15	72510622	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.131579
15	72510626	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0555556
15	72510658	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.09375
15	72510682	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	72518751	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	72522243	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.5
15	72522252	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.363636
15	72522285	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72522328	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.15
15	72522337	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.105263
15	72522338	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.238095
15	72522363	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.08
15	72522394	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.275
15	72522399	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.121212
15	72522417	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72522441	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72522472	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0789474
15	72522499	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.129032
15	72575023	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72575032	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.4
15	72575943	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72575944	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72576250	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0714286
6	72744690	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.142857
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.230769
15	72763263	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72763289	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72779341	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.148148
15	72779345	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.0869565
15	72779373	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.238095
15	72779381	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.285714
15	72779386	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.0952381
15	72779387	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.190476
15	72779409	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.142857
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.625
15	72779509	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.571429
6	72817655	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.272727
5	72863591	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72863641	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.266667
5	72863663	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72868271	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.142857
5	72868275	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.117647
5	72868311	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.242424
5	72868317	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	72868377	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.136364
7	72894723	A->G	+	ENSG00000196313	POM121	protein_coding	Intergenic	.	.	Alu	0.125
7	72981967	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	72994477	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.315789
7	72996924	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	72996930	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.176471
7	72996955	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.470588
7	72996967	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
3	73020549	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.583333
11	73053007	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	73053029	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	73053648	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.615385
3	73053655	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.352941
14	73069638	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73071056	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73071148	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.272727
14	73071184	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
11	73090315	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.117647
11	73090323	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.15
11	73097070	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.111111
11	73097092	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	73097147	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.166667
10	73116983	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.235294
10	73117010	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.166667
10	73117014	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.115385
10	73117024	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.137931
10	73117107	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.0909091
10	73117111	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.391304
10	73117112	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.0909091
10	73122861	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.2
10	73129310	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.416667
10	73129317	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.153846
10	73129321	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.230769
10	73129337	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.272727
10	73129346	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.2
10	73129398	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.2
11	73138729	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0967742
11	73138732	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.121212
11	73138740	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.194444
11	73138746	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0606061
11	73138772	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	73138775	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.25
11	73138781	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	73145777	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.117647
14	73150947	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.4
14	73152486	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.454545
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.25
9	73157463	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.3
10	73159808	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.142857
10	73159816	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.266667
6	73165905	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.454545
4	73189465	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.307692
4	73189468	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.133333
4	73189473	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.125
4	73189489	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.428571
4	73189504	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73189521	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.521739
4	73189535	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	1
4	73189593	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.1875
4	73189598	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.235294
4	73189599	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.470588
4	73189607	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.3125
4	73196036	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
4	73196072	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.272727
4	73196137	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73196141	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73196192	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.4
4	73196199	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73196206	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.636364
4	73196264	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73196265	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.272727
4	73196270	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.363636
4	73196271	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.272727
4	73226242	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.3
4	73226486	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0689655
4	73226491	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.133333
4	73226542	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.115385
4	73226550	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.08
4	73226558	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0833333
4	73226598	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.107143
4	73226614	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.125
4	73226618	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.15
4	73226665	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.08
4	73240855	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.230769
4	73240973	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.153846
4	73240979	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0625
4	73240981	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73240988	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0740741
4	73241030	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.172414
4	73241066	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.535714
4	73241083	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.130435
4	73241084	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0869565
10	73361166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	73361240	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
10	73361266	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	73402921	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.153846
10	73403074	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.181818
2	73457922	A->G	+	ENSG00000230002	ALMS1-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
2	73457930	A->G	+	ENSG00000230002	ALMS1-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
10	73480507	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.1875
10	73480613	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.153846
10	73480700	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.153846
10	73480740	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.6
6	73514305	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
6	73514443	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
6	73514451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
6	73514842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	73514919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
7	73515635	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.3
7	73515640	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.25
7	73515666	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.125
7	73515788	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.181818
7	73516265	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.222222
7	73516266	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.222222
7	73516267	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.263158
7	73516275	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.105263
7	73516279	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.125
15	73610179	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.230769
7	73684761	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.25
7	73684762	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.384615
7	73684765	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.142857
7	73684803	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.3
7	73684804	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.157895
7	73684809	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.117647
11	73685488	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	1
11	73693502	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.181818
11	73693506	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.230769
11	73697393	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.272727
11	73697462	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.166667
11	73697469	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.4
14	73737853	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73737854	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73737920	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.222222
14	73737971	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.4
14	73737976	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.111111
11	73757268	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.2
10	73758053	A->G	+	ENSG00000176986	SEC24C	protein_coding	Intergenic	.	.	Alu	0.25
10	73758070	A->G	+	ENSG00000176986	SEC24C	protein_coding	Intergenic	.	.	Alu	0.2
10	73758073	A->G	+	ENSG00000176986	SEC24C	protein_coding	Intergenic	.	.	Alu	0.2
14	73767063	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.545455
6	73772251	A->G	+	ENSG00000156535	CD109	protein_coding	Intergenic	.	.	Alu	0.117647
8	73872998	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.181818
8	73873017	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.45
8	73873029	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.111111
8	73873043	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.1
8	73873050	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.181818
8	73873091	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.588235
8	73966546	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.0952381
10	74027485	A->G	+	ENSG00000225761	AL596247.1	sense_intronic	Intergenic	.	.	Alu	0.3
2	74052616	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.636364
2	74052617	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.363636
2	74052717	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.153846
2	74052718	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.153846
2	74052723	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.142857
2	74052749	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.333333
2	74052778	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.272727
14	74086604	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.25
14	74086637	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.352941
14	74086638	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	1
14	74091654	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.363636
7	74178318	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.5
7	74178330	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.133333
7	74178342	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.375
7	74178343	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.5
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.235294
7	74178423	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.3
7	74178424	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.130435
7	74178450	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.411765
7	74178465	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.4375
10	74185947	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	74185948	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.466667
10	74185952	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.125
10	74185987	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.333333
10	74186014	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.133333
10	74204805	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	74204860	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.272727
10	74204877	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.5
10	74204878	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.25
10	74204880	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.25
10	74204929	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.4
10	74205555	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.125
10	74205556	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.25
X	74208276	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
10	74210147	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.3
10	74210174	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	74216560	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
X	74223717	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.142857
X	74225527	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.461538
X	74225529	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.142857
X	74225531	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.4375
X	74225536	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.214286
X	74225560	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.272727
X	74225588	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.9
X	74225601	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.588235
X	74225612	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.6
X	74225620	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74225632	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.111111
X	74225656	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3
X	74225736	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74265939	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.115385
X	74265969	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0714286
X	74265972	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.185185
X	74265977	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.192308
X	74265998	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.37037
X	74266004	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74266028	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.128205
X	74266034	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.235294
X	74266054	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74266090	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.30303
X	74266093	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.454545
X	74266097	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.21875
X	74266120	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.44
X	74266131	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.16129
X	74266144	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.09375
X	74266145	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.21875
X	74266150	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74266153	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.30303
X	74266158	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0571429
X	74266169	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.137931
X	74266266	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.222222
X	74266294	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.36
X	74266317	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.368421
X	74266318	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74266339	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.352941
X	74266368	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74266391	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.190476
X	74266394	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.142857
X	74266407	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74266408	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0909091
X	74266411	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.791667
X	74266444	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.242424
X	74266462	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0606061
X	74266463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74266476	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.128205
X	74266484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74266485	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.103448
X	74266507	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.172414
11	74395510	A->G	-	ENSG00000165434	PGM2L1	protein_coding	Intergenic	.	.	Alu	0.266667
X	74572754	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	74574051	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	74574052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
10	74601855	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.166667
16	74645958	A->G	-	ENSG00000168411	RFWD3	protein_coding	Intergenic	.	.	Alu	0.2
16	74646020	A->G	-	ENSG00000168411	RFWD3	protein_coding	Intergenic	.	.	Alu	0.636364
5	74704985	A->G	+	ENSG00000049860	HEXB	protein_coding	Intergenic	.	.	Alu	0.2
11	74752450	A->G	+	ENSG00000166439	RNF169	protein_coding	Intergenic	.	.	Alu	0.181818
11	74752466	A->G	+	ENSG00000166439	RNF169	protein_coding	Intergenic	.	.	Alu	0.3
15	74796165	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.333333
7	74839913	A->G	-	ENSG00000196275	GTF2IRD2	protein_coding	Intergenic	.	.	Alu	0.166667
7	74839918	A->G	-	ENSG00000196275	GTF2IRD2	protein_coding	Intergenic	.	.	Alu	0.2
7	74839991	A->G	-	ENSG00000196275	GTF2IRD2	protein_coding	Intergenic	.	.	Alu	0.133333
7	74842427	A->G	-	ENSG00000196275	GTF2IRD2	protein_coding	Intergenic	.	.	Alu	0.2
10	74845053	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.5
10	74845076	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.214286
10	74845108	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.133333
10	74845139	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.181818
10	74845151	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.142857
10	74845658	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.322581
10	74845662	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.0909091
10	74845663	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.205882
10	74845670	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.344828
10	74845681	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.307692
10	74856741	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	74856780	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.117647
10	74856790	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.133333
10	74856845	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	74857901	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.266667
10	74857908	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.153846
7	74871093	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	74876429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	74876582	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
7	74876918	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
7	74878846	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	74879105	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74879175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.578947
7	74880402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	74880415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
7	74880419	A->G	-	.	.	.	Intergenic	.	.	Alu	0.909091
7	74880420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
7	74881486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
10	74933971	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.333333
10	74933977	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.133333
10	74934023	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.133333
10	74934035	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.176471
10	74934036	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.117647
10	74934039	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.133333
16	74979744	A->G	-	ENSG00000103091	WDR59	protein_coding	Intergenic	.	.	Alu	0.333333
16	74979745	A->G	-	ENSG00000103091	WDR59	protein_coding	Intergenic	.	.	Alu	0.454545
16	74979785	A->G	-	ENSG00000103091	WDR59	protein_coding	Intergenic	.	.	Alu	0.2
16	74979818	A->G	-	ENSG00000103091	WDR59	protein_coding	Intergenic	.	.	Alu	0.285714
7	74986300	A->G	+	ENSG00000274070	CASTOR2	protein_coding	Intergenic	.	.	Alu	0.333333
7	74986302	A->G	+	ENSG00000274070	CASTOR2	protein_coding	Intergenic	.	.	Alu	0.304348
7	74986310	A->G	+	ENSG00000274070	CASTOR2	protein_coding	Intergenic	.	.	Alu	0.238095
7	74986370	A->G	+	ENSG00000274070	CASTOR2	protein_coding	Intergenic	.	.	Alu	0.222222
10	75006903	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	75006974	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.3125
7	75011621	A->G	+	ENSG00000274070	CASTOR2	protein_coding	Intergenic	.	.	Alu	0.3
16	75026680	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.214286
16	75026711	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.6
16	75026816	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.25
14	75029542	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.142857
14	75029603	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.416667
14	75029604	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.454545
16	75029943	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.1875
16	75029964	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.153846
16	75029983	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.230769
16	75029995	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	1
16	75030020	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.307692
16	75050706	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.2
16	75050750	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.4
16	75050937	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.133333
16	75050961	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.3125
16	75050964	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.266667
17	75150986	A->G	-	ENSG00000189159	JPT1	protein_coding	Intergenic	.	.	Alu	0.2
17	75224711	A->G	+	ENSG00000125450	NUP85	protein_coding	Intergenic	.	.	Alu	0.153846
17	75224712	A->G	+	ENSG00000125450	NUP85	protein_coding	Intergenic	.	.	Alu	0.285714
17	75224728	A->G	+	ENSG00000125450	NUP85	protein_coding	Intergenic	.	.	Alu	0.2
17	75224787	A->G	+	ENSG00000125450	NUP85	protein_coding	Intergenic	.	.	Alu	0.285714
17	75259218	A->G	-	ENSG00000125447	GGA3	protein_coding	Intergenic	.	.	Alu	0.636364
17	75259226	A->G	-	ENSG00000125447	GGA3	protein_coding	Intergenic	.	.	Alu	0.181818
17	75321253	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.105263
17	75321321	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.09375
17	75324268	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.190476
17	75324330	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	75324359	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.1875
17	75324482	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.125
17	75324610	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75324615	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.136364
17	75324656	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.130435
17	75324672	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.352941
17	75324678	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.25
17	75324683	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75324954	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75325000	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.333333
17	75346237	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75346249	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75346322	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.588235
17	75346361	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.105263
17	75346396	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	75346413	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.323529
17	75346414	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3125
17	75346420	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.16129
17	75346433	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0526316
17	75346450	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.08
17	75346477	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	75346482	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	75346494	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0740741
17	75346720	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0740741
17	75346743	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0555556
17	75346764	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.37037
17	75355904	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.277778
17	75355907	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.526316
17	75355914	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.210526
17	75355969	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.277778
7	75368313	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
16	75368734	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intergenic	.	.	Alu	0.294118
16	75368789	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intergenic	.	.	Alu	0.363636
16	75368799	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intergenic	.	.	Alu	0.363636
17	75373926	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.666667
17	75373958	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.230769
16	75387273	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intergenic	.	.	Alu	0.230769
16	75387279	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intergenic	.	.	Alu	0.8
7	75388095	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
10	75557050	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.272727
10	75557052	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.272727
10	75557059	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75557194	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75557235	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.125
17	75593318	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.125
17	75593326	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.111111
17	75593327	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.105263
6	75612994	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.142857
6	75613003	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.214286
16	75651434	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.125
16	75651439	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.12
16	75651473	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.1
16	75651536	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0869565
16	75651568	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.272727
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.433333
10	75692081	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.142857
10	75692091	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
17	75805339	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.2
17	75806209	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.181818
11	75817967	A->G	+	ENSG00000198382	UVRAG	protein_coding	Intergenic	.	.	Alu	0.181818
4	75916865	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.153846
17	76055945	A->G	-	ENSG00000167881	SRP68	protein_coding	Intergenic	.	.	Alu	0.6
12	76058558	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.117647
4	76130086	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.285714
4	76130118	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.2
4	76130119	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.105263
4	76130145	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.25
4	76130164	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.214286
4	76130177	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.25
4	76130178	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.285714
7	76337627	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.125
7	76337637	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.0740741
7	76337643	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.0689655
7	76337673	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.0625
7	76337704	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.0769231
7	76337773	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.117647
7	76345324	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.470588
7	76345367	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.333333
7	76345370	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.25
7	76348412	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.181818
7	76348542	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	1
7	76348548	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.636364
7	76348676	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.529412
7	76348677	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.277778
10	76361060	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
5	76415886	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.133333
5	76418086	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	76418092	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.307692
5	76418135	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.1875
5	76463043	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.230769
12	76483757	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76483812	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.285714
12	76483813	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76483819	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.153846
12	76483863	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.235294
12	76483868	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76483878	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76483908	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76483917	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.266667
12	76483925	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76483947	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.176471
12	76498796	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.173913
12	76498817	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0952381
12	76498822	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
5	76507824	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
12	76526774	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0731707
12	76526788	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0789474
12	76824763	A->G	+	ENSG00000186908	ZDHHC17	protein_coding	Intergenic	.	.	Alu	0.166667
5	76859661	A->G	+	ENSG00000171643	S100Z	protein_coding	Intergenic	.	.	Alu	0.5
5	76957983	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.285714
5	76957994	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.153846
5	76957999	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.133333
5	76958038	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.545455
4	76974890	A->G	+	ENSG00000138758	11-Sep	protein_coding	Intergenic	.	.	Alu	0.2
4	76974898	A->G	+	ENSG00000138758	11-Sep	protein_coding	Intergenic	.	.	Alu	0.4
4	76974921	A->G	+	ENSG00000138758	11-Sep	protein_coding	Intergenic	.	.	Alu	0.307692
7	77063836	A->G	+	ENSG00000259628	AC007000.3	processed_transcript	Intergenic	.	.	Alu	0.166667
7	77063926	A->G	+	ENSG00000259628	AC007000.3	processed_transcript	Intergenic	.	.	Alu	0.272727
14	77526891	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.166667
14	77526906	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.153846
14	77526972	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.133333
14	77526978	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.142857
14	77529760	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.266667
14	77529761	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.285714
14	77531611	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.181818
14	77531612	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.416667
14	77531638	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.142857
14	77531646	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.142857
14	77531652	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.133333
14	77531768	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.2
7	77558091	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.181818
1	77602743	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intergenic	.	.	Alu	0.181818
1	77669569	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intergenic	.	.	Alu	0.2
1	77698346	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.2
7	77715008	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.2
7	77715047	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.2
7	77737875	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.142857
4	77760988	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.181818
11	77761050	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.117647
11	77761056	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.352941
11	77761898	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.1
11	77761899	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.1
11	77761958	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.25
X	77763247	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.153846
X	77763256	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.636364
X	77763282	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.478261
X	77763283	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.227273
X	77763289	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.111111
X	77763348	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.12
X	77763349	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.130435
X	77763363	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.117647
X	77763372	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.125
X	77763382	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.1
X	77778963	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.166667
X	77778965	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.25
X	77779060	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.294118
X	77779066	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.6
4	77782637	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.142857
4	77782753	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.133333
4	77784576	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.166667
4	77784586	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.125
4	77790777	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.318182
4	77790786	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.28
4	77790787	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.190476
9	77838022	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
9	77838068	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.285714
9	77838325	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.210526
9	77838350	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.473684
9	77838380	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.214286
X	77851102	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.1
X	77851108	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.0952381
X	77851111	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.263158
X	77851122	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.384615
X	77851159	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.222222
X	77851164	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.105263
9	77870420	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.111111
9	77870433	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.133333
9	77870464	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.333333
9	77870474	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.428571
9	77870523	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77870532	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.266667
9	77870605	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.25
X	77883658	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.583333
X	77883661	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.272727
X	77883679	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.545455
X	77889077	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.166667
17	77972311	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.117647
17	77972312	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.222222
17	77972365	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.1
17	77972401	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.1
17	77972418	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.0833333
17	77972427	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.391304
17	77972444	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.142857
17	77972453	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.111111
9	77975611	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.047619
9	77975660	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.151515
9	77975817	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.3
17	77976879	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.181818
9	77984285	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0952381
9	77984328	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.117647
9	77984364	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.111111
9	77984365	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.210526
9	77984433	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0952381
9	77984441	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.238095
9	77985657	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77985672	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	77985860	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77986621	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0512821
9	77986622	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0769231
9	77986679	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.030303
9	77986688	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.122807
9	77986694	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0526316
9	77986706	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.213115
9	77986708	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0322581
9	77986710	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0483871
9	77986775	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.210526
9	77986776	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.243243
9	78012421	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0625
X	78132073	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.272727
X	78132159	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.3
X	78132174	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.181818
11	78291664	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.307692
11	78291700	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	78291734	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	78323993	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	78331384	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.272727
11	78389417	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0833333
11	78389435	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78389439	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.466667
11	78389444	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.413793
11	78389445	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.384615
11	78389471	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.08
11	78389474	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	78389502	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	78389515	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.4
11	78396694	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0535714
11	78396695	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0555556
11	78396735	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0434783
11	78396762	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	78405223	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0555556
11	78405237	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0571429
11	78405263	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.15
11	78405371	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.125
16	78455407	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.636364
16	78455421	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78455424	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.666667
16	78455431	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.416667
16	78455476	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78455489	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.0909091
15	78455497	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.235294
16	78455509	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.923077
16	78455522	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.25
16	78455532	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.416667
16	78472613	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.25
16	78498084	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	1
16	78498094	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.142857
16	78498125	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.272727
16	78510045	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78753289	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.153846
16	78753334	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.153846
17	78754353	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.125
17	78754460	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.3125
16	78768518	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.142857
17	78791195	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.105263
16	78802714	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.454545
16	78802730	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.166667
16	78802773	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.4
16	78802795	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.454545
16	78802796	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.636364
16	78842285	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.142857
4	78867121	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.2
4	78867129	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.2
15	78875730	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.384615
16	78884151	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
15	78888232	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.153846
15	78888315	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.285714
15	78888346	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.148148
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
15	78898322	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
15	78898323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
15	78898379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
15	78899078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	78899115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.423077
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.321429
15	78899301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
15	78899362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	78987512	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	78987522	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	78987524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	78989146	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
16	79019036	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.181818
10	79094767	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.230769
10	79094773	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.2
10	79094796	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.2
10	79094822	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.25
10	79094828	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.117647
18	79214983	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.6
9	79586295	A->G	+	ENSG00000106829	TLE4	protein_coding	Intergenic	.	.	Alu	0.380952
9	79586312	A->G	+	ENSG00000106829	TLE4	protein_coding	Intergenic	.	.	Alu	0.2
12	79597137	A->G	-	ENSG00000177425	PAWR	protein_coding	Intergenic	.	.	Alu	0.272727
9	79598264	A->G	+	ENSG00000106829	TLE4	protein_coding	Intergenic	.	.	Alu	0.142857
4	79933873	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	1
15	80066688	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80066701	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0740741
15	80066737	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.227273
15	80066738	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.7
15	80066739	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80066741	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0952381
15	80066776	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.08
15	80066777	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.28
15	80066786	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.285714
15	80066799	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0833333
15	80066812	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.448276
15	80066818	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0625
15	80066823	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.09375
15	80066860	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.552632
15	80092277	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0980392
15	80092385	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80092386	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0675676
15	80107699	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
10	80190650	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.181818
10	80480985	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.3
10	80483970	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.153846
10	80484010	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.08
10	80484045	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.166667
10	80484046	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.117647
10	80484083	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.142857
10	80484087	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.142857
10	80484102	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.2
10	80484160	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.636364
17	80566713	A->G	+	ENSG00000141564	RPTOR	protein_coding	Intergenic	.	.	Alu	0.4
5	80699438	A->G	+	ENSG00000113318	MSH3	protein_coding	Intergenic	.	.	Alu	0.4
16	80992786	A->G	-	ENSG00000103121	CMC2	protein_coding	Intergenic	.	.	Alu	0.1
5	81439594	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	81453554	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	81453728	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	81453729	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	1
5	81463443	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.133333
5	81463455	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0326087
5	81463456	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0631579
5	81463482	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0529801
5	81463483	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0342466
5	81463495	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0763359
5	81463506	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0416667
5	81463508	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.057377
5	81463532	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0540541
5	81463576	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.508333
5	81463578	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0406504
5	81463591	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.424242
5	81463600	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0352941
5	81463613	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.116505
5	81463617	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.826531
5	81463618	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.204082
5	81463637	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0288462
5	81463643	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0625
5	81463653	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0206186
5	81463659	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.673684
5	81463866	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.162791
5	81463906	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0576923
5	81463907	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	81463917	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0487805
5	81463925	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	81463946	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	81463951	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.448276
5	81463952	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.266667
5	81463968	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.230769
5	81463982	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0615385
5	81463996	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.169231
5	81464001	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.609375
5	81464015	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.30303
5	81464019	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0428571
5	81464020	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.115942
5	81464042	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0338983
5	81464063	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.08
5	81464064	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0392157
5	81501639	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	81501687	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.304348
5	81501691	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.130435
5	81501695	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.263158
5	81501701	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.157895
5	81501761	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.3
5	81501769	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.2
5	81501835	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.142857
5	81501836	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.142857
16	81504410	A->G	+	ENSG00000153815	CMIP	protein_coding	Intergenic	.	.	Alu	0.454545
16	81504435	A->G	+	ENSG00000153815	CMIP	protein_coding	Intergenic	.	.	Alu	0.3
5	81544224	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	81544228	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	81544231	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	81562043	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0769231
17	81595748	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.4
17	81632424	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.153846
17	81632450	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.181818
17	81632517	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.8
17	81632518	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.4
5	81643700	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0606061
5	81643709	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.461538
5	81643731	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0487805
5	81712888	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	81847851	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.181818
17	81847859	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.190476
17	81847878	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.157895
17	81856020	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.318182
17	82264861	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.115385
17	82264870	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.129032
17	82264883	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.0869565
4	82366834	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intergenic	.	.	Alu	0.0315789
4	82366840	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intergenic	.	.	Alu	0.0352941
17	82421587	A->G	+	ENSG00000169660	HEXDC	protein_coding	Intergenic	.	.	Alu	0.272727
17	82421601	A->G	+	ENSG00000169660	HEXDC	protein_coding	Intergenic	.	.	Alu	0.2
17	82471334	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.272727
17	82521819	A->G	+	ENSG00000141568	FOXK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	82537393	A->G	+	ENSG00000141568	FOXK2	protein_coding	Intergenic	.	.	Alu	0.153846
17	82537715	A->G	+	ENSG00000141568	FOXK2	protein_coding	Intergenic	.	.	Alu	0.15
4	82884124	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.428571
4	82884125	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.230769
4	82884151	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.2
4	82964140	A->G	-	ENSG00000189308	LIN54	protein_coding	Intergenic	.	.	Alu	0.307692
15	83052660	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.333333
15	83052763	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.185185
15	83052769	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.6
15	83052841	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	1
15	83052860	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.117647
4	83057768	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.2
4	83057775	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.272727
11	83184005	A->G	+	ENSG00000254676	AP000873.4	sense_overlapping	Intergenic	.	.	Alu	0.285714
11	83184072	A->G	+	ENSG00000254676	AP000873.4	sense_overlapping	Intergenic	.	.	Alu	0.117647
9	83697864	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
15	84638899	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	84702811	A->G	+	ENSG00000103194	USP10	protein_coding	Intergenic	.	.	Alu	0.454545
16	84702837	A->G	+	ENSG00000103194	USP10	protein_coding	Intergenic	.	.	Alu	0.181818
15	84796035	A->G	+	ENSG00000166716	ZNF592	protein_coding	Intergenic	.	.	Alu	0.142857
15	84796038	A->G	+	ENSG00000166716	ZNF592	protein_coding	Intergenic	.	.	Alu	0.285714
2	84984865	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.2
2	84984947	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.416667
2	84984959	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.538462
2	84984962	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.615385
2	84988181	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	85006832	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.7
2	85006993	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.285714
15	85589527	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.117647
16	85597108	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.363636
2	85609813	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.181818
2	85609818	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.727273
2	85609819	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.727273
2	85609845	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.461538
2	85609849	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.230769
2	85609953	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.153846
2	85609962	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.142857
6	85628132	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0952381
6	85628158	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0952381
6	85628181	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.133333
6	85628184	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.2
6	85633747	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0740741
6	85633760	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.1875
6	85633777	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.2
6	85633800	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.142857
6	85633895	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.214286
6	85633903	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.166667
16	85671497	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.133333
16	85671534	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.142857
9	85732277	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.117647
16	85798295	A->G	-	ENSG00000131148	EMC8	protein_coding	Intergenic	.	.	Alu	0.181818
9	85972402	A->G	+	ENSG00000135040	NAA35	protein_coding	Intergenic	.	.	Alu	0.1875
9	85984208	A->G	+	ENSG00000135040	NAA35	protein_coding	Intergenic	.	.	Alu	0.272727
11	86029005	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.142857
2	86112495	A->G	+	ENSG00000132300	PTCD3	protein_coding	Intergenic	.	.	Alu	0.8
2	86145311	A->G	+	ENSG00000132305	IMMT	protein_coding	Intergenic	.	.	Alu	0.2
2	86145319	A->G	+	ENSG00000132305	IMMT	protein_coding	Intergenic	.	.	Alu	0.272727
10	86491225	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.357143
10	86491268	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.55
10	86491318	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.166667
10	86491336	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.105263
10	86491345	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.529412
10	86491368	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.611111
10	86508894	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.181818
2	86766410	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.166667
2	86766424	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.2
1	86869860	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.181818
1	86890552	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.230769
1	86890566	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.133333
1	86890608	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.133333
1	86891187	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.166667
1	86891295	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.153846
1	86898639	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.133333
1	86898649	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.153846
1	86898670	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.117647
1	86898678	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.222222
4	86938351	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.636364
4	86938360	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.545455
4	86938371	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.727273
1	86943757	A->G	+	ENSG00000153936	HS2ST1	protein_coding	Intergenic	.	.	Alu	0.2
4	87021975	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.153846
4	87022012	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.583333
4	87022027	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.125
4	87022058	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.142857
4	87022084	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.272727
4	87022085	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.217391
4	87072176	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
10	87104075	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.142857
10	87104224	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	87104225	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.142857
10	87104293	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.8
10	87104395	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.125
10	87104400	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.111111
10	87104404	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.285714
10	87104410	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.105263
10	87104426	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.206897
10	87104427	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.142857
10	87104432	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.241379
10	87107235	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.153846
10	87107251	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.1
10	87111521	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.105263
10	87111527	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.1
10	87111687	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.384615
10	87165008	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.153846
10	87165010	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.181818
6	87187543	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87187571	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.263158
6	87187579	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.222222
6	87187635	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0769231
6	87187636	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.208333
6	87187640	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.217391
6	87197617	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.25
6	87197700	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.142857
10	87208328	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.333333
10	87208392	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.133333
10	87208442	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.615385
6	87230705	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.1
6	87230744	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87249871	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87249890	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.571429
6	87249899	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.142857
6	87249944	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.133333
6	87249978	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.235294
6	87250344	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.4
6	87250349	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.5
6	87250364	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.15
4	87336015	A->G	-	ENSG00000255723	AC108516.2	processed_transcript	Intergenic	.	.	Alu	0.125
16	87479969	A->G	-	ENSG00000140948	ZCCHC14	protein_coding	Intergenic	.	.	Alu	0.166667
16	87479979	A->G	-	ENSG00000140948	ZCCHC14	protein_coding	Intergenic	.	.	Alu	0.142857
16	87480026	A->G	-	ENSG00000140948	ZCCHC14	protein_coding	Intergenic	.	.	Alu	0.357143
16	87480048	A->G	-	ENSG00000140948	ZCCHC14	protein_coding	Intergenic	.	.	Alu	0.181818
9	87501265	A->G	+	ENSG00000196730	DAPK1	protein_coding	Intergenic	.	.	Alu	0.133333
6	87547745	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.636364
6	87547764	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.357143
6	87547777	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.117647
6	87547778	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.176471
16	87731160	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.210526
16	87731161	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.125
16	87731188	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.125
16	87731192	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.130435
16	87731201	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.08
16	87731202	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.333333
16	87731244	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.2
16	87731253	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.583333
16	87731268	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.3
16	87731269	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.157895
16	87731314	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.173913
3	87841636	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	87841644	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	87841675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	87841691	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
3	87841753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	87864735	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
10	87891659	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0833333
10	87891734	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.05
3	87937677	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
3	87937738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	87947770	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0526316
10	87947779	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0512821
10	87947815	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0434783
10	87947840	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0363636
10	87948703	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.133333
10	87948706	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.166667
4	88013598	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	88013614	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	88013617	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.173913
4	88013697	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.142857
4	88016684	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.133333
4	88016699	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.375
4	88016727	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.133333
4	88016733	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.142857
4	88016735	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.1875
4	88016746	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	88016770	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.368421
4	88016799	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.153846
4	88016801	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.307692
4	88016802	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.230769
4	88016827	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.421053
4	88016840	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.391304
4	88016872	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	88016886	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.272727
4	88016899	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.125
4	88017049	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.125
4	88017092	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.4
4	88017095	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.190476
4	88017109	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.2
4	88023147	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0740741
4	88023148	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.115385
4	88023149	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	88025180	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0444444
3	88089020	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.130435
3	88089025	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.391304
3	88089304	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	88400892	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.5
9	88400902	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	88400928	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.2
9	88407266	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.166667
4	88602139	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.153846
4	88602146	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.153846
4	88602150	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.153846
4	88602296	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.133333
4	88602362	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.307692
4	88602514	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.272727
4	88602536	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.357143
4	88602556	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.166667
4	88602579	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.166667
4	88602748	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.416667
2	88608840	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.105263
2	88608875	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.181818
1	88855497	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.15
1	88857820	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0909091
16	88867311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
16	88867312	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
1	88873253	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0833333
1	88873311	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	88874417	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0487805
1	88874551	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.142857
1	88874562	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	88884095	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.105263
1	88884104	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.111111
1	88884160	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0512821
1	88884165	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.125
1	88884166	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0666667
1	88884192	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.190476
1	88884231	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.1
1	88884245	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	88884298	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.133333
1	88887107	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.181818
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.48
16	89368292	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.25
16	89368308	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89368329	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.125
16	89368335	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.588235
16	89368345	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89385024	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89385054	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.153846
16	89385104	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.133333
16	89385105	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.133333
14	89392752	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.533333
14	89392778	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.294118
14	89392785	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.533333
16	89393389	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.466667
16	89393391	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.333333
16	89393396	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.153846
16	89393409	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.470588
16	89393420	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.157895
16	89393461	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.105263
16	89393614	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.1
14	89467712	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.153846
14	89467734	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.181818
14	89467736	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.75
16	89477265	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.0363636
16	89477290	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.0350877
16	89477321	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.0289855
16	89477524	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.105263
16	89477530	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.611111
16	89477535	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.210526
16	89477570	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.1
14	89498308	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.111111
14	89498355	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.153846
16	89516430	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.625
16	89516431	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.235294
16	89516649	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.181818
16	89516668	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.166667
16	89516744	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.214286
16	89516745	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.153846
16	89516750	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.142857
16	89516754	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.357143
14	89554927	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	89578878	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	89584850	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.2
14	89584877	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.125
14	89584935	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.0952381
14	89584940	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.176471
14	89584948	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.142857
14	89602562	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.375
14	89602573	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.384615
14	89602608	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.818182
16	89786147	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.181818
16	89786157	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.166667
16	89786167	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.166667
16	89786219	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.166667
16	89786257	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.4
16	89790865	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.6
16	89790968	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.636364
16	89790974	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.8
16	89790978	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.636364
16	89803719	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.5
16	89803720	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.307692
6	89816807	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.3
6	89816839	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.25
15	89859598	A->G	-	ENSG00000157823	AP3S2	protein_coding	Intergenic	.	.	Alu	0.272727
15	89873983	A->G	-	ENSG00000157823	AP3S2	protein_coding	Intergenic	.	.	Alu	0.333333
15	89873992	A->G	-	ENSG00000157823	AP3S2	protein_coding	Intergenic	.	.	Alu	0.166667
15	89874013	A->G	-	ENSG00000157823	AP3S2	protein_coding	Intergenic	.	.	Alu	0.181818
16	89876764	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
16	89876765	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
16	89880679	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89880688	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.166667
16	89886499	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.466667
16	89886507	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.133333
16	89886615	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.619048
16	89886619	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.529412
16	89886683	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.529412
16	89886707	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.15
16	89886790	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.527778
16	89886817	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.0625
16	89886857	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.176471
16	89886858	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.85
16	89978694	A->G	+	ENSG00000223959	AFG3L1P	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.166667
15	90082885	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	90141292	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.176471
6	90141318	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	90141345	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	90141363	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.217391
6	90141460	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	90141472	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.133333
6	90242942	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.333333
6	90242976	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.181818
6	90243017	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.454545
6	90247368	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.142857
6	90283414	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.181818
6	90283431	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.105263
6	90283514	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.363636
6	90283552	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.2
6	90283612	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.142857
6	90283647	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.153846
15	90532898	A->G	+	ENSG00000140577	CRTC3	protein_coding	Intergenic	.	.	Alu	0.153846
15	90532899	A->G	+	ENSG00000140577	CRTC3	protein_coding	Intergenic	.	.	Alu	0.230769
7	90612595	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.24
7	90612596	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.24
7	90612651	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.5
7	90612652	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.388889
7	90612661	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.25
7	90612678	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.1
7	90612692	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	90612722	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.210526
7	90612737	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.125
7	90626707	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.181818
7	90626819	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.3
14	90796974	A->G	-	ENSG00000165914	TTC7B	protein_coding	Intergenic	.	.	Alu	0.2
1	90913095	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	90913101	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
1	90913104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
1	90928277	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.117647
1	90928526	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.416667
4	90932574	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.833333
1	90975503	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.105263
15	90985696	A->G	-	ENSG00000198901	PRC1	protein_coding	Intergenic	.	.	Alu	0.142857
15	90989353	A->G	-	ENSG00000198901	PRC1	protein_coding	Intergenic	.	.	Alu	0.2
1	91010359	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0625
1	91010376	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0909091
14	91287564	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intergenic	.	.	Alu	0.230769
14	91501816	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91501829	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.111111
14	91501837	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.352941
14	91503167	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.133333
14	91503187	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	91807875	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.166667
7	91956293	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.2
15	91959612	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.272727
15	91971134	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.181818
15	91971141	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.818182
15	91971149	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.2
15	91971340	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.7
7	91978056	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.2
10	91998061	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.125
10	92001844	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.3
10	92001884	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.363636
10	92001903	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.333333
14	92066675	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.153846
7	92091324	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.115385
7	92091332	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.59375
7	92091333	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.294118
7	92091341	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.0555556
7	92091382	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.117647
7	92091415	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.333333
7	92091421	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.2
7	92091465	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.176471
7	92091466	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.46875
7	92091492	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.346154
7	92091507	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.12
7	92091527	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.136364
7	92091528	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.25
14	92091782	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.157895
14	92091824	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.0909091
14	92091832	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.15
14	92091846	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.705882
14	92091914	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.304348
14	92091942	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.0952381
14	92091946	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.190476
14	92091991	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.333333
12	92103064	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.153846
12	92103077	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.25
12	92103084	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.153846
12	92103210	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.2
7	92220809	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.133333
7	92220810	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.625
7	92220826	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.142857
7	92220831	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.214286
7	92220883	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.4
7	92220891	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.125
7	92220893	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.6875
7	92220955	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.15
7	92220960	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.666667
7	92220961	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.571429
7	92220977	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.117647
7	92256980	A->G	+	ENSG00000001629	ANKIB1	protein_coding	Intergenic	.	.	Alu	0.117647
7	92256981	A->G	+	ENSG00000001629	ANKIB1	protein_coding	Intergenic	.	.	Alu	0.117647
1	92259862	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.153846
1	92259866	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.166667
1	92259872	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.230769
1	92259898	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.363636
1	92273517	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.454545
1	92273518	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.727273
1	92273533	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.454545
1	92292549	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.571429
1	92292571	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.181818
1	92292880	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.3
1	92292912	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.181818
1	92292940	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.25
1	92292947	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.307692
10	92313925	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.125
10	92314849	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.2
10	92322058	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.470588
10	92322059	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.411765
10	92322117	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.5
10	92325236	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
10	92336898	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.384615
9	92525243	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.166667
9	92543461	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.181818
7	92573343	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.142857
7	92573358	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.105263
7	92573427	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.133333
10	92662119	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
10	92662127	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	92669978	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	92670076	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
10	92670112	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	92670115	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	92670219	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
10	92670220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
10	92671103	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
10	92671104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
10	92671109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
10	92671150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15625
10	92671156	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
10	92671190	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
10	92671213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
10	92671274	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
10	92671283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
10	92671407	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
10	92671485	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
7	92673942	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0952381
7	92673949	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0909091
7	92673987	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0909091
7	92674022	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.2
7	92711660	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.928571
7	92711675	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.172414
7	92711735	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.131579
7	92711736	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.421053
7	92711737	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.162162
7	92711740	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0526316
7	92711764	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.655172
7	92711766	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0689655
7	92711771	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.172414
7	92711994	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.75
7	92711999	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.727273
7	92712024	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.1
7	92712030	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.238095
7	92712073	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.411765
7	92812510	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.208333
9	92843275	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
9	92843281	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
9	92843409	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
9	92843414	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.75
9	92843415	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.545455
7	92870538	A->G	+	ENSG00000237819	AC002454.1	antisense	Intergenic	.	.	Alu	0.117647
7	92870539	A->G	+	ENSG00000237819	AC002454.1	antisense	Intergenic	.	.	Alu	0.176471
15	92889185	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0350877
15	92889208	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0615385
15	92889234	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.126984
15	92889248	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.030303
15	92889272	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.084507
15	92889276	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.056338
15	92889277	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.222222
15	92889281	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.301587
15	92889329	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.046875
15	92889345	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0625
15	92889355	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0638298
15	92889365	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.170732
15	92889382	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.030303
15	92889387	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.03125
15	92889396	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	92889397	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	92889408	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.177778
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	92889426	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0526316
15	92908850	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1
15	92908933	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	92908998	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.102041
15	92909004	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0444444
15	92909039	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0512821
7	92931683	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
7	92931827	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
7	92931870	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
7	92931887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	93086344	A->G	+	ENSG00000143033	MTF2	protein_coding	Intergenic	.	.	Alu	0.4
1	93086385	A->G	+	ENSG00000143033	MTF2	protein_coding	Intergenic	.	.	Alu	0.142857
1	93086386	A->G	+	ENSG00000143033	MTF2	protein_coding	Intergenic	.	.	Alu	0.428571
14	93215479	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.333333
14	93215482	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.272727
14	93215518	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.153846
14	93215542	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.363636
12	93421313	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.142857
12	93421334	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.2
12	93421340	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.133333
12	93421366	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.166667
9	93445729	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	93720102	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.181818
11	93720103	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.333333
11	93720124	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.142857
11	93720138	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.454545
11	93720143	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.153846
11	93720148	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.181818
11	93720218	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.2
11	93720297	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.2
11	93720670	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.7
11	93748890	A->G	+	ENSG00000166012	TAF1D	protein_coding	Intergenic	.	.	Alu	0.181818
11	93748891	A->G	+	ENSG00000166012	TAF1D	protein_coding	Intergenic	.	.	Alu	0.181818
8	93760659	A->G	+	ENSG00000164953	TMEM67	protein_coding	Intergenic	.	.	Alu	0.333333
5	93918533	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.181818
5	93918559	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.307692
5	93918600	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.272727
5	93918601	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.272727
5	93918639	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.363636
5	93918655	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.153846
5	93981147	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.333333
5	93981153	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.133333
5	93981270	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	94013381	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.181818
5	94050448	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.133333
5	94050458	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
12	94313415	A->G	+	ENSG00000173588	CEP83	protein_coding	Intergenic	.	.	Alu	0.166667
15	94393874	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.153846
15	94393929	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.166667
9	94442730	A->G	+	ENSG00000148110	MFSD14B	protein_coding	Intergenic	.	.	Alu	0.3
10	94578153	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.235294
10	94578179	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.45
9	94848265	A->G	+	ENSG00000148120	C9orf3	protein_coding	Intergenic	.	.	Alu	0.181818
12	95053822	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.2
12	95053848	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.5
12	95057312	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.3
12	95057324	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.181818
11	95206874	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.166667
11	95218724	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.142857
12	95225908	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.0869565
12	95239862	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.0571429
14	95460429	A->G	-	ENSG00000176438	SYNE3	protein_coding	Intergenic	.	.	Alu	0.3
12	95476245	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
12	95476251	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
12	95476252	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
12	95476287	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.307692
12	95476291	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.346154
12	95476292	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.321429
12	95476331	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.214286
12	95482666	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.4
11	95824161	A->G	+	ENSG00000166037	CEP57	protein_coding	Intergenic	.	.	Alu	0.0350877
11	95824166	A->G	+	ENSG00000166037	CEP57	protein_coding	Intergenic	.	.	Alu	0.0769231
11	95824190	A->G	+	ENSG00000166037	CEP57	protein_coding	Intergenic	.	.	Alu	0.0810811
2	96190470	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.25
2	96190475	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.818182
12	96201544	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.25
2	96280642	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.285714
2	96280646	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.307692
2	96280687	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.235294
2	96280714	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.117647
2	96280717	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.1
2	96280886	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.117647
2	96280890	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.0909091
2	96280921	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.0740741
2	96280968	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.12
12	96291757	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.272727
12	96300590	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.363636
12	96355459	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.111111
12	96355481	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.32
12	96355501	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.428571
12	96355502	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.111111
12	96355537	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.117647
12	96355543	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.176471
12	96355556	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.545455
12	96375734	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.142857
9	96407820	A->G	+	ENSG00000165244	ZNF367	protein_coding	Intergenic	.	.	Alu	0.363636
9	96415193	A->G	-	ENSG00000165244	ZNF367	protein_coding	Intergenic	.	.	Alu	0.0540541
9	96415313	A->G	-	ENSG00000165244	ZNF367	protein_coding	Intergenic	.	.	Alu	0.125
9	96415701	A->G	-	ENSG00000165244	ZNF367	protein_coding	Intergenic	.	.	Alu	0.0714286
14	96553642	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.555556
10	96580299	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.4
10	96703041	A->G	-	ENSG00000155629	PIK3AP1	protein_coding	Intergenic	.	.	Alu	0.2
1	96725816	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0526316
1	96725825	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
1	96725888	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.119048
1	96725896	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0625
1	96725898	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.177778
1	96725909	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.4
1	96725912	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.5
1	96725915	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	96725923	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0392157
1	96725924	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0434783
1	96725928	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0697674
1	96725954	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.27027
1	96725960	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.09375
1	96725964	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.16
1	96725992	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.235294
1	96725995	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0967742
1	96725996	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.115385
1	96726019	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.666667
1	96726020	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.25
1	96726027	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	96726032	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0571429
1	96743103	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	96743264	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0606061
1	96745878	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.692308
1	96745879	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.923077
1	96746581	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.08
1	96796274	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0555556
1	96797955	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0454545
1	96797982	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0571429
1	96797989	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	96798206	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0606061
1	96798219	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.387097
1	96798220	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.533333
1	96798254	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.363636
1	96798285	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.230769
1	96798286	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.357143
1	96798299	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.272727
1	96798388	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.357143
10	96865688	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.111111
10	96865754	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.0769231
10	96865771	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.16
10	96888111	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.117647
10	96888112	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.117647
10	96888120	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.294118
10	96888188	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.214286
10	96888189	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96888258	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.173913
9	96932653	A->G	-	ENSG00000188152	NUTM2G	protein_coding	Intergenic	.	.	Alu	0.545455
5	96942489	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.142857
5	96942492	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.133333
5	96942493	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.2
5	96942543	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.4
5	96942569	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.363636
9	96974511	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intergenic	.	.	Alu	0.142857
10	97485302	A->G	-	ENSG00000155229	MMS19	protein_coding	Intergenic	.	.	Alu	0.176471
8	97647442	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.411765
8	97665910	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.181818
8	97668275	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.133333
8	97675481	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.181818
8	97675693	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.4
8	97676874	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.142857
8	97676878	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.230769
8	97677089	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.117647
8	97677370	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.0666667
8	97779842	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.16
8	97779852	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.12
8	97779866	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.115385
8	97779920	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.1
8	97779931	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	97779983	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.2
8	97780006	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.0869565
8	97786662	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.416667
8	97795722	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.111111
8	97795732	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.277778
8	97795742	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.176471
8	97796069	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.142857
7	97971506	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
8	98043329	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.0366972
8	98043353	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.132075
8	98043382	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.0232558
8	98043399	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.0240964
8	98043405	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.666667
8	98043407	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.0930233
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.514286
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.757576
9	98061966	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.2
7	98115341	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.166667
7	98115555	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.4
7	98115599	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.272727
4	98312867	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.421053
4	98312907	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.166667
4	98312909	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.214286
4	98312954	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	1
4	98312975	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.375
12	98526704	A->G	+	ENSG00000120802	TMPO	protein_coding	Intergenic	.	.	Alu	0.416667
12	98527408	A->G	+	ENSG00000120802	TMPO	protein_coding	Intergenic	.	.	Alu	0.111111
4	98883537	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.6
5	98883934	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98884346	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
7	98904229	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.5
7	98904329	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.2
7	98904362	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.545455
7	98904368	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.5
5	98918186	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.548387
5	98918190	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	98918202	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.222222
5	98918222	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	98918242	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	98918274	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	98918293	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98918294	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98918355	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.4375
7	98959821	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.2
7	99007888	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.3
7	99077471	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.5
7	99077560	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.2
13	99201884	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.5
13	99201916	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.133333
13	99201952	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.166667
13	99201958	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.272727
13	99290470	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.416667
13	99290471	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.583333
13	99290476	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.333333
13	99318635	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.611111
13	99318638	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.833333
13	99318641	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.277778
13	99318642	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.705882
13	99318643	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.588235
13	99318700	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.833333
13	99318706	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.461538
13	99318710	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	1
13	99318763	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.272727
13	99318767	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.545455
6	99405662	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.571429
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.307692
2	99407174	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.692308
2	99407180	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.416667
2	99407197	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.363636
7	99495526	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.1
7	99496615	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.133333
7	99496771	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.166667
7	99497307	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.666667
7	99497313	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	1
7	99497339	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.2
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	1
6	99530059	A->G	-	ENSG00000228439	TSTD3	protein_coding	Intergenic	.	.	Alu	0.133333
6	99536105	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	99555603	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.181818
6	99555641	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.222222
6	99555715	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.545455
6	99555717	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.545455
2	99643112	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.142857
2	99643127	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.1875
2	99643132	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.142857
2	99643229	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.166667
2	99643235	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.2
3	99832761	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.9
3	99832792	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.7
4	99933502	A->G	-	ENSG00000164031	DNAJB14	protein_coding	Intergenic	.	.	Alu	0.3
12	100091317	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.25
12	100091393	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.3
12	100111391	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	100135332	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.2
12	100135340	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.111111
12	100135366	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.130435
12	100135407	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0967742
12	100135447	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.12
12	100135448	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.130435
12	100136833	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0645161
12	100136839	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.264706
12	100136894	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0625
12	100136909	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.65
12	100136918	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.04
12	100136949	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.15
12	100136976	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0697674
12	100136989	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0952381
12	100136990	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0681818
12	100136993	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.097561
12	100137004	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0540541
12	100137006	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0512821
12	100137014	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.26087
12	100137015	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0612245
12	100137086	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.173077
10	100236203	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.727273
10	100236207	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.2
10	100236308	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.266667
10	100236309	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.266667
10	100236310	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	100236336	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.2
10	100251633	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.666667
10	100251644	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	100251676	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.125
7	100253152	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.2
7	100254091	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.7
7	100254096	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.192308
7	100254110	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.166667
7	100254145	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.230769
7	100254154	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.4
7	100254155	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.269231
7	100254215	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.380952
7	100254223	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.25
7	100254240	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.111111
7	100254241	A->G	-	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.117647
10	100257359	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	100257361	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.25
10	100257369	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.6
10	100257411	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.428571
10	100257415	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.307692
10	100257438	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.2
10	100257476	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	100257478	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	100257479	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.2
10	100257482	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.466667
10	100257493	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.25
10	100257495	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	100257526	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.285714
14	100265258	A->G	+	ENSG00000258904	AL157871.5	sense_intronic	Intergenic	.	.	Alu	0.142857
14	100265263	A->G	+	ENSG00000258904	AL157871.5	sense_intronic	Intergenic	.	.	Alu	0.133333
14	100265267	A->G	+	ENSG00000258904	AL157871.5	sense_intronic	Intergenic	.	.	Alu	0.214286
10	100265724	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.2
10	100265725	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	100265740	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.153846
10	100265793	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	100265802	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.272727
7	100278624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	100283856	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.0952381
7	100284319	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	100284354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	100284426	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	100286265	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.2
1	100286307	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.2
1	100286333	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	1
3	100287985	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
3	100287986	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.153846
3	100288017	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.25
3	100288051	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100288226	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
9	100314193	A->G	-	ENSG00000136891	TEX10	protein_coding	Intergenic	.	.	Alu	0.2
9	100314226	A->G	-	ENSG00000136891	TEX10	protein_coding	Intergenic	.	.	Alu	0.181818
12	100323016	A->G	+	ENSG00000136021	SCYL2	protein_coding	Intergenic	.	.	Alu	0.181818
7	100363047	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.130435
7	100363065	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.105263
1	100410065	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.6
1	100410091	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.75
1	100410097	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.125
1	100410101	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.277778
1	100410119	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.142857
1	100410153	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.153846
1	100410154	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.181818
1	100435765	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	100725714	A->G	+	ENSG00000114354	TFG	protein_coding	Intergenic	.	.	Alu	0.2
7	100877259	A->G	+	ENSG00000087087	SRRT	protein_coding	Intergenic	.	.	Alu	0.181818
7	101086441	A->G	+	ENSG00000169871	TRIM56	protein_coding	Intergenic	.	.	Alu	0.166667
7	101086446	A->G	+	ENSG00000169871	TRIM56	protein_coding	Intergenic	.	.	Alu	0.272727
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0666667
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.134615
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.04
2	101275066	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0526316
15	101284563	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.461538
2	101288389	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101288456	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0909091
2	101288457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0952381
2	101304952	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.272727
3	101586096	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.181818
3	101586131	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.0909091
3	101663068	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.157895
3	101663078	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.25
3	101663084	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.157895
3	101663117	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.111111
3	101663119	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.117647
3	101691309	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
2	101719964	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.2
10	101790349	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.119048
10	101790365	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.589286
10	101790369	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.44898
10	101790370	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0416667
10	101790397	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0952381
10	101790401	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0333333
10	101790410	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.225806
10	101790437	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.253731
10	101790445	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0655738
10	101790470	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.209302
10	101790471	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.292683
10	101790480	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.122449
10	101790495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.142857
10	101790496	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.244898
10	101790504	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.06
10	101790508	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0925926
10	101790528	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0357143
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.270833
10	101790549	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.358974
10	101790550	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	1
12	101817379	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.454545
12	101818450	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.142857
12	101824588	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1
12	101824595	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.0952381
12	101824646	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.214286
12	101824660	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101824670	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.105263
12	101824684	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.26087
12	101824685	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.0833333
12	101824718	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.434783
12	101824719	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.304348
12	101824727	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.4375
12	101827040	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.137931
12	101827045	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.0769231
12	101827093	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.0645161
12	101827103	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1
12	101827115	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.217391
12	101827119	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1
12	101827123	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.15
7	101833191	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.117647
7	101833307	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.115385
7	101833339	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.0689655
7	101833408	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.0645161
7	101833448	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.104167
7	101833461	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.105263
7	101847866	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.133333
7	101847867	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.133333
7	101847919	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.142857
7	101847922	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.117647
7	101847937	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.157895
7	101847938	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.25
7	101855758	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.2
14	101896578	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.3
14	101897900	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.545455
14	101897905	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.181818
7	101940133	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.153846
7	101940142	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.230769
7	101965794	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.3
7	101965809	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.153846
10	101966222	A->G	-	ENSG00000120029	ARMH3	protein_coding	Intergenic	.	.	Alu	0.142857
7	102139030	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.272727
14	102163567	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.153846
14	102163577	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.125
14	102163578	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.125
14	102179517	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.105263
14	102179551	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
8	102241640	A->G	+	ENSG00000246263	UBR5-AS1	antisense	Intergenic	.	.	Alu	0.785714
8	102241641	A->G	+	ENSG00000246263	UBR5-AS1	antisense	Intergenic	.	.	Alu	0.571429
4	102338391	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.4
8	102344386	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.461538
8	102344452	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.666667
8	102358899	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.363636
8	102358907	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102358971	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.142857
8	102358972	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.190476
8	102359002	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.125
7	102385719	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
7	102400199	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.130435
11	102425662	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.0454545
11	102425686	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.0769231
11	102425860	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.133333
11	102427604	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.214286
11	102427631	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.25
11	102427657	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.272727
11	102428430	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.0689655
11	102428439	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.148148
11	102428440	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.08
11	102428502	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.125
10	102478687	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	1
10	102478714	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.285714
10	102478722	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.153846
10	102478727	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.285714
10	102478794	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.25
10	102478810	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.153846
10	102478818	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.153846
10	102486862	A->G	-	ENSG00000138107	ACTR1A	protein_coding	Intergenic	.	.	Alu	0.2
4	102559818	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.533333
4	102559832	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.266667
14	102612836	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.3
14	102612878	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102651277	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102651300	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102651313	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.5
14	102651433	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102705917	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102705921	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102705981	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102705991	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.916667
14	102705997	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.230769
14	102706005	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.307692
4	102790761	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
4	102814395	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0263158
4	102814413	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0531915
4	102814426	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0253165
4	102814582	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0416667
14	102846736	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
8	102867294	A->G	+	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.153846
8	102867334	A->G	+	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.214286
14	102893340	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
10	103108956	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.416667
10	103108964	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.333333
10	103108991	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.117647
10	103108996	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.411765
10	103108997	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103109043	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103109051	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103109066	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103109096	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103109120	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103116646	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103116659	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.48
10	103116667	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.363636
10	103116793	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103116808	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.333333
10	103118440	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103118494	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103118521	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103118600	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103118604	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103143528	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	1
10	103143533	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.693878
10	103143534	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.666667
10	103143542	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.282051
10	103143569	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0350877
10	103143581	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.146341
10	103143593	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.666667
10	103143868	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.45
10	103143872	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103143873	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103165706	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.363636
10	103165750	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.357143
10	103165768	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103165769	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.333333
10	103165902	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.117647
10	103166755	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.16
10	103166760	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103166852	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103166926	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.157895
10	103167148	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0454545
10	103167153	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0810811
10	103167196	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103167200	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103167234	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103170612	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.047619
10	103170614	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0454545
10	103170655	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.05
10	103170691	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	103170730	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103170731	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.16
10	103170800	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103179054	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103179128	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	103179152	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.09375
10	103179156	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.387097
10	103179198	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.12
10	103179203	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103179226	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103179228	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103184175	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103189754	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103189833	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103190122	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.117647
10	103190133	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103190152	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103190196	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
8	103311482	A->G	+	ENSG00000164930	FZD6	protein_coding	Intergenic	.	.	Alu	0.2
8	103311483	A->G	+	ENSG00000164930	FZD6	protein_coding	Intergenic	.	.	Alu	0.6
8	103311563	A->G	+	ENSG00000164930	FZD6	protein_coding	Intergenic	.	.	Alu	0.4
14	103390082	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.181818
14	103494345	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.181818
14	103597571	A->G	+	ENSG00000256053	APOPT1	protein_coding	Intergenic	.	.	Alu	0.4
14	103597611	A->G	+	ENSG00000256053	APOPT1	protein_coding	Intergenic	.	.	Alu	0.272727
14	103682116	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.117647
14	103682132	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.4
14	103682133	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.833333
14	103682159	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.103448
14	103682191	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.125
14	103682192	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.0882353
14	103682193	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.363636
14	103682204	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.0571429
14	103682223	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.344828
14	103682231	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.1875
14	103682249	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.769231
14	103682255	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.589744
14	103682263	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.047619
14	103682319	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.173913
14	103682325	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.446809
14	103682633	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.4
14	103682639	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.125
14	103682672	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.153846
12	103936540	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.130435
X	104125048	A->G	-	ENSG00000269743	SLC25A53	protein_coding	Intergenic	.	.	Alu	0.166667
12	104460402	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0420168
12	104460457	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.032967
12	104460517	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0810811
12	104460533	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0697674
12	104460544	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104460578	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0588235
12	104460584	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.103448
12	104460585	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0833333
12	104461974	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0223881
12	104462046	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0212766
12	104462052	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0273973
12	104462082	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0243902
12	104462088	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.025641
12	104480316	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104480366	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0952381
12	104480390	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0526316
12	104480426	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0444444
12	104531234	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104531240	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104543873	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0740741
12	104544003	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0540541
12	104544049	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.193548
12	104556838	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.357143
12	104556874	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.25
12	104556893	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104559487	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104559578	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.3
12	104559623	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.230769
12	104637053	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.08
12	104637184	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104637211	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104686036	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.3
12	104686106	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.294118
12	104686171	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.08
12	104686181	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.148148
12	104696382	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104696427	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.08
12	104696436	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	104696537	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0410959
12	104696568	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0684932
12	104696607	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0425532
12	104755566	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.210526
12	104755665	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.15
12	104755666	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.190476
9	104896925	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
7	105023249	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.176471
7	105023255	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.5
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.375
7	105031171	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.153846
7	105031632	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105031815	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105031911	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0869565
7	105031917	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105031947	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105031961	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.107143
7	105032323	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105032341	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3125
7	105049183	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105070440	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.153846
7	105070453	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105070719	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105073261	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
14	105267358	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.307692
14	105267432	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.333333
7	105273458	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.230769
7	105273523	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.2
7	105273531	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.181818
7	105273563	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.333333
14	105339553	A->G	+	ENSG00000179364	PACS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	105339575	A->G	+	ENSG00000179364	PACS2	protein_coding	Intergenic	.	.	Alu	0.15
7	105340501	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.3
7	105343792	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.166667
7	105350653	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.235294
7	105350663	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.428571
7	105373500	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.272727
7	105385313	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.2
7	105385319	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.4
9	105711320	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.153846
9	105711574	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.2
9	105711582	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.166667
9	105711649	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.214286
9	105711699	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.3125
9	105711705	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.133333
9	105711716	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.117647
9	105711723	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.25
9	105711735	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.5
9	105711749	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.2
2	105779225	A->G	+	ENSG00000071051	NCK2	protein_coding	Intergenic	.	.	Alu	0.6
7	107171663	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.3
7	107171767	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.117647
7	107171780	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.230769
7	107171781	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	107171815	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.2
7	107171845	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.166667
7	107271130	A->G	-	ENSG00000164597	COG5	protein_coding	Intergenic	.	.	Alu	0.2
3	107544906	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.1
3	107565973	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.181818
3	107566054	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.368421
3	107566055	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.263158
3	107592281	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.166667
3	107638882	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.153846
6	107923628	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.157895
6	107923677	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.272727
6	107938488	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.0645161
6	107938694	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.157895
6	107938744	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.08
6	107938770	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.107143
6	107938784	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.16
6	107938805	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.153846
6	107938806	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.142857
6	107945439	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.692308
6	107945445	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.285714
6	107945461	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107945501	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.363636
6	107945505	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.5
11	108017200	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.157895
11	108017202	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.210526
11	108017226	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.105263
11	108017315	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.153846
8	108218890	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.117647
8	108218928	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.0869565
6	108244844	A->G	-	ENSG00000112335	SNX3	protein_coding	Intergenic	.	.	Alu	0.166667
7	108498403	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.25
7	108505460	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.181818
7	108505491	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.25
7	108505495	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.16
7	108505501	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.423077
7	108505556	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.235294
7	108505566	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.111111
7	108505582	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.25
7	108505642	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0740741
6	108600303	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.470588
6	108600359	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.692308
6	108600360	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.307692
6	108600381	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.1875
6	108600426	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.321429
6	108600427	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.571429
6	108600496	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.25
6	108600497	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.416667
6	108600499	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.153846
2	108630047	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
1	108942981	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.333333
1	108942983	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.214286
1	108942984	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.666667
1	108942988	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.153846
1	108943042	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.166667
9	109058129	A->G	-	ENSG00000106771	TMEM245	protein_coding	Intergenic	.	.	Alu	0.133333
9	109058139	A->G	-	ENSG00000106771	TMEM245	protein_coding	Intergenic	.	.	Alu	0.214286
4	109478165	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.2
4	109484573	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.166667
4	109484587	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.125
4	109484622	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.133333
4	109484807	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.166667
4	109500368	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.2
4	109500382	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.153846
4	109500433	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.157895
4	109500465	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.4
4	109500469	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.466667
4	109500758	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.272727
4	109527625	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.2
4	109528306	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.6
4	109566982	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.166667
4	109567064	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.25
4	109567089	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.105263
4	109573326	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.4
4	109573394	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.416667
4	109573395	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.363636
4	109702339	A->G	-	ENSG00000138794	CASP6	protein_coding	Intergenic	.	.	Alu	0.916667
12	109943584	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.157895
12	109975920	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.117647
12	109976042	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.266667
12	109976063	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.166667
12	109976556	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.142857
12	109976681	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.16
12	109978179	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.105263
12	109978180	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.111111
12	109978185	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.0869565
12	109978260	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.111111
12	109978265	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.08
12	109978355	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.2
9	110053339	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	110053340	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	110053408	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.5
9	110053413	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.125
9	110053417	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.133333
9	110070975	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	110070976	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	110071070	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	110109128	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.6
9	110245943	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.333333
9	110245982	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.2
11	110265364	A->G	-	ENSG00000137710	RDX	protein_coding	Intergenic	.	.	Alu	0.3
11	110265365	A->G	-	ENSG00000137710	RDX	protein_coding	Intergenic	.	.	Alu	0.272727
11	110265367	A->G	-	ENSG00000137710	RDX	protein_coding	Intergenic	.	.	Alu	0.5
12	110311783	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.153846
12	110319088	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.1
1	110352527	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.642857
1	110352533	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	110352549	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	110352550	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.222222
1	110352596	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.461538
1	110352597	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.642857
1	110353140	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
1	110353195	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	110353218	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	110353249	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
1	110353261	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
1	110367553	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.307692
1	110367565	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.266667
1	110367575	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.461538
1	110367589	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.454545
1	110367641	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.230769
11	110447378	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.0645161
12	110448006	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.125
12	110448057	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.2
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.583333
12	110448131	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.181818
12	110448139	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.333333
6	110714898	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.142857
6	110714916	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.133333
6	110715006	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.272727
6	110715007	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.272727
6	110844660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
6	110844661	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
13	110891940	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.153846
13	110897198	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0769231
13	110897260	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0277778
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.571429
6	110898006	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
6	110898053	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
6	110898075	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
1	110898278	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.0555556
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.5
13	110898665	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.375
13	110898675	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0660377
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.140625
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.147541
13	110898861	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0681818
13	110898862	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0571429
13	110898867	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0571429
13	110898870	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
13	110898893	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0810811
13	110898894	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0606061
13	110899024	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.375
13	110899029	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.4375
1	110910422	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
1	110910553	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
13	111207184	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.285714
13	111207238	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.133333
13	111207281	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.4
7	111214556	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.2
6	111318226	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.166667
6	111318252	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.2
9	111454836	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.166667
9	111462880	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.2
9	111477142	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.25
9	111477169	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.153846
9	111480557	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.5
6	111489520	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.133333
6	111553607	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.363636
12	111574520	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.157895
12	111574526	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.411765
12	111574566	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.3
12	111574602	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.25
12	111574695	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.230769
12	111574696	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.272727
12	111586471	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.2
1	111632870	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	111632909	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	111653564	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.111111
12	111671467	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.277778
11	111854235	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.363636
12	112100869	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.166667
9	112152866	A->G	-	ENSG00000106868	SUSD1	protein_coding	Intergenic	.	.	Alu	0.727273
9	112165495	A->G	-	ENSG00000106868	SUSD1	protein_coding	Intergenic	.	.	Alu	0.384615
9	112165499	A->G	-	ENSG00000106868	SUSD1	protein_coding	Intergenic	.	.	Alu	0.416667
12	112221687	A->G	-	ENSG00000173064	HECTD4	protein_coding	Intergenic	.	.	Alu	0.4
11	112239130	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.25
11	112239136	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.230769
9	112256798	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.272727
9	112287510	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.153846
9	112287516	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	112287517	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.3
9	112302656	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	112302713	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.181818
9	112312415	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.2
12	112432549	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.117647
12	112432558	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.5
12	112434563	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.181818
12	112500123	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.181818
3	112565657	A->G	+	ENSG00000138459	SLC35A5	protein_coding	Intergenic	.	.	Alu	0.166667
3	112565658	A->G	+	ENSG00000138459	SLC35A5	protein_coding	Intergenic	.	.	Alu	0.2
1	112623431	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.416667
1	112623544	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.272727
1	112623574	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.1875
1	112623738	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	112623859	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.12
1	112623885	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.238095
1	112623895	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.105263
1	112624465	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.272727
1	112624488	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112663571	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.388889
1	112663602	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	112663628	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.148148
1	112663631	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.777778
1	112663643	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.12
1	112663647	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.08
1	112663779	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.454545
1	112663780	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.542857
1	112663978	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.147059
1	112663979	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0571429
1	112663996	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.128205
1	112664014	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.7
1	112664048	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.16
1	112664050	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.833333
1	112664055	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.227273
1	112664056	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.47619
1	112664061	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	112664079	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	112664085	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0967742
1	112664105	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0487805
1	112664111	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.307692
1	112664117	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0540541
1	112664121	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0857143
1	112664152	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.538462
1	112664157	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
5	112764167	A->G	+	ENSG00000134982	APC	protein_coding	Intergenic	.	.	Alu	0.2
10	112979571	A->G	+	ENSG00000148737	TCF7L2	protein_coding	Intergenic	.	.	Alu	0.2
13	113591132	A->G	+	ENSG00000198176	TFDP1	protein_coding	Intergenic	.	.	Alu	0.5
13	113591177	A->G	+	ENSG00000198176	TFDP1	protein_coding	Intergenic	.	.	Alu	0.470588
1	113716442	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0322581
1	113716455	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0363636
1	113716625	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	113721787	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.2
1	113723220	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.263158
1	113723238	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.266667
1	113723263	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.157895
1	113723275	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.125
1	113723315	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.210526
1	113723316	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.315789
1	113723322	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.4
3	113729040	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0681818
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.326087
3	113729061	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0454545
3	113729082	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.1
3	113729110	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.264706
3	113729154	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.111111
3	113729161	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
3	113729199	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.230769
3	113729616	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.176471
3	113729617	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.125
3	113729671	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0789474
3	113729675	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0571429
3	113729752	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.315789
3	113729753	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.190476
3	113729771	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.125
3	113729776	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.176471
3	113729804	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.571429
3	113729822	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.25
3	113730189	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.5
1	113732989	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.266667
1	113732994	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.2
1	113733175	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.230769
2	113753241	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113753244	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.3
2	113753290	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.09375
2	113753307	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.225
2	113753311	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.25
2	113753316	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.179487
2	113753317	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.075
2	113753343	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.1
2	113753349	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0454545
2	113753352	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0540541
2	113753354	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.216216
2	113753355	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.162162
2	113753371	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0540541
2	113753390	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0555556
2	113753393	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.1
2	113753408	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0740741
2	113753414	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.107143
2	113753419	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.266667
2	113753443	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113753466	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.190476
2	113936068	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.153846
2	113936106	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.111111
2	113936142	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.111111
2	113936171	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.294118
2	113936238	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.166667
2	113936242	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.105263
2	113949123	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.176471
2	113949231	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0869565
3	114062179	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.272727
13	114258842	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.166667
13	114258843	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.25
13	114258867	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.5
13	114258873	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.142857
13	114258921	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.25
13	114258922	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.181818
13	114258927	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.153846
13	114259018	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.6
13	114259019	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.6
3	114544708	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.181818
8	115524381	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.230769
12	115943097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
12	115943106	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
12	115943142	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	116104113	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.230769
12	116104139	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116104148	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.214286
12	116146261	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1875
12	116146325	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.238095
12	116146326	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	116146392	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.384615
12	116146393	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.269231
12	116165427	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.714286
12	116165428	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.666667
12	116165436	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.6
12	116165469	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0444444
12	116165471	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.372093
12	116165531	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.216216
12	116165551	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.184211
12	116165558	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.121212
12	116170725	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116181098	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.153846
12	116181125	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.166667
12	116206284	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0588235
12	116251397	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.208333
12	116253856	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0952381
12	116253897	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.05
12	116253898	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0517241
12	116253906	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0363636
12	116253908	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0350877
12	116253924	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.246377
12	116253928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0526316
12	116253929	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.118421
12	116253930	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0933333
12	116253931	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0833333
12	116253932	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0428571
12	116253940	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0769231
12	116253954	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0816327
12	116253955	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0769231
12	116253956	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.037037
12	116253965	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0483871
12	116253993	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.282051
7	116878866	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.166667
11	116884265	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	116884279	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	116884284	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
7	116890667	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.214286
7	116890717	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.117647
7	116894153	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.166667
7	116894197	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.125
11	116921606	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	116921611	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.545455
11	116921618	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	116921624	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	116923045	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.115385
11	116923054	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0740741
11	116923070	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	116923073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.380952
11	116923081	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.5
11	116923093	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0714286
11	116923098	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	116923119	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.103448
11	116923148	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	116923205	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	116940370	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	116999667	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.15
11	117012990	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0769231
11	117014077	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117031658	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117038530	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117063648	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.235294
11	117063653	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117063706	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.233333
11	117063707	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117063733	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.08
11	117063763	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117063817	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117063847	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117063861	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117065755	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	117065758	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117065767	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	117065829	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117065833	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117065911	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117066130	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.108108
11	117066132	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117066171	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.09375
11	117066206	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0666667
11	117066207	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0666667
11	117066233	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0625
11	117070356	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117070368	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0535714
11	117070369	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.06
11	117070404	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0425532
11	117070405	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.191489
11	117070413	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117070415	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.611111
11	117070418	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0465116
11	117070543	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117070568	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.257143
11	117070571	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0857143
11	117070578	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.558824
11	117070610	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	117070649	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117070864	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0857143
11	117070878	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0731707
11	117070890	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.162791
11	117070891	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.116279
11	117070913	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	117070922	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0625
11	117070923	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	117070924	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0882353
11	117070957	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117071875	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117071891	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117071892	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117071898	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117075680	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0545455
11	117075986	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0512821
11	117075987	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0512821
11	117076052	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.227273
11	117076053	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0454545
11	117076076	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0555556
11	117076116	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	117076128	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
1	117082987	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.5
1	117082988	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.5
1	117083079	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	117083092	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.363636
11	117085129	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0487805
11	117085169	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.151515
11	117085183	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.296296
11	117085184	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0714286
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.461538
11	117085264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.115385
11	117091369	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
12	117182276	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.454545
12	117182322	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.636364
12	117182390	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.1875
12	117182453	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.3
12	117182456	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.2
12	117182483	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.416667
12	117182541	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.2
12	117182542	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.3
12	117182636	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.105263
12	117182700	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.176471
12	117182701	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.111111
12	117182766	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.153846
12	118193105	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.272727
12	118194886	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.5
12	118194887	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.230769
12	118194919	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118194942	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118194983	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118197756	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118205749	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118229211	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.421053
12	118229238	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.1
12	118229241	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.294118
12	118229303	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.384615
12	118229304	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.333333
12	118234525	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118279966	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118309605	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.176471
12	118309627	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.157895
12	118309644	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118309654	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.416667
12	118309680	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118309766	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118310189	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118310201	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118310240	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118315069	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118332037	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118332041	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118348989	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	118351909	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.08
12	118351937	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.046875
12	118351985	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.12069
12	118352045	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.037037
12	118352046	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0357143
12	118352051	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0384615
12	118352056	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.115385
12	118352067	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0535714
12	118352077	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0625
12	118352287	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.416667
12	118352321	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.272727
12	118356415	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0697674
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.407407
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.381818
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.6
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.584906
12	118356438	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0816327
12	118356445	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0444444
12	118356464	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0344828
12	118356503	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0540541
12	118356518	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0892857
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.15
12	118365349	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.3125
12	118365357	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	118446202	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.166667
X	118692750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	118692776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	118692786	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	118692836	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	118692854	A->G	+	.	.	.	Intergenic	.	.	Alu	1
4	118695995	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.1
11	118753248	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.363636
11	118753249	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.25
11	118774632	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	118774641	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.5
11	119001962	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.3
10	119062859	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119062875	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.157895
10	119062876	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.1
10	119062880	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.130435
10	119062894	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.111111
10	119062949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.151515
10	119063007	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.3
10	119075774	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.3
10	119588426	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.0571429
10	119588481	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.0645161
10	119588522	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.166667
10	119588523	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.111111
10	119588526	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.176471
10	119588551	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.0769231
X	119631375	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.5
X	119631381	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.266667
X	119631430	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
X	119659915	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.352941
X	119659925	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.157895
X	119659962	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.214286
X	119660010	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.428571
X	119660011	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.285714
X	119684556	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.0740741
X	119684563	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.125
X	119684628	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.1
X	119684670	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.3
X	119684750	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.230769
X	119687389	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.24
X	119687428	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.136364
X	119687429	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
X	119687430	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.0833333
X	119687433	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.409091
X	119687521	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.142857
X	119687522	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.0909091
X	119687544	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.117647
8	119806084	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.3
8	119806090	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
X	119827948	A->G	-	ENSG00000125351	UPF3B	protein_coding	Intergenic	.	.	Alu	0.181818
X	119828015	A->G	-	ENSG00000125351	UPF3B	protein_coding	Intergenic	.	.	Alu	0.133333
8	119830027	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.153846
3	120078638	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	120078691	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	120078717	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	120078720	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.142857
12	120109703	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.615385
12	120109716	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.272727
12	120109731	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.333333
12	120112148	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.133333
12	120112151	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.133333
12	120112153	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.133333
12	120112224	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.105263
12	120112264	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.125
12	120112506	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.272727
12	120544455	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.25
12	120549523	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.4
12	120556404	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.131579
12	120556410	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.194444
12	120556416	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.129032
12	120556903	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.0833333
12	120556949	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.142857
12	120556950	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.214286
12	120556969	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.15
12	120556975	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.0952381
12	120557013	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.12
12	120568033	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.230769
12	120568102	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.153846
12	120568124	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.157895
12	120568224	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.0714286
9	120775100	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.352941
9	120775126	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.153846
9	120775184	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.588235
9	120775197	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.125
9	120775220	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.1
9	120775281	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.666667
9	120775295	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.4
12	120808192	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.2
12	120808292	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.166667
12	120808294	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.368421
12	120808295	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.210526
12	120808325	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.142857
12	120808348	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.363636
12	120808355	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.333333
9	120833827	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.142857
9	120834072	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.117647
9	120834160	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.166667
9	120834181	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.2
9	120839929	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.25
9	120840016	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.181818
9	120840584	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.266667
9	120840597	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.153846
9	120840725	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.285714
9	120840748	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.153846
9	120840752	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.25
12	120863720	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.241379
12	120863734	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.358974
12	120863739	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.075
12	120863770	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.09375
12	120863964	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.125
12	120868529	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.307692
12	120868708	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.384615
12	120868752	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.214286
12	120868753	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.230769
12	120885920	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.272727
9	121082823	A->G	+	ENSG00000119397	CNTRL	protein_coding	Intergenic	.	.	Alu	0.15
9	121082859	A->G	+	ENSG00000119397	CNTRL	protein_coding	Intergenic	.	.	Alu	0.133333
12	121321187	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.181818
12	121321189	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.363636
12	121321197	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.166667
12	121321443	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.44
12	121321493	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.190476
12	121321503	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.238095
12	121335179	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.142857
12	121335238	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.333333
12	121335262	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.6
12	121335263	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.3
3	121832464	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.266667
3	121832465	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.266667
10	121957680	A->G	-	ENSG00000107672	NSMCE4A	protein_coding	Intergenic	.	.	Alu	0.181818
12	122034615	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.6
12	122034642	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.153846
12	122034645	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.166667
12	122037881	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.4
12	122038053	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.153846
7	122074911	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
12	122119058	A->G	+	ENSG00000175727	MLXIP	protein_coding	Intergenic	.	.	Alu	0.714286
12	122119069	A->G	+	ENSG00000175727	MLXIP	protein_coding	Intergenic	.	.	Alu	0.230769
12	122403581	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.166667
12	122403683	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.153846
12	122403724	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.153846
12	122403725	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.285714
12	122403740	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.181818
12	122403748	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.230769
12	122408949	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.142857
12	122408990	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.105263
12	122408993	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.105263
12	122409004	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.133333
12	122412134	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	122412141	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.142857
12	122412142	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.85
12	122412161	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.407407
12	122412166	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.190476
12	122412193	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.178571
12	122412201	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.08
12	122412243	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.2
12	122412246	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.235294
12	122412260	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.105263
12	122412555	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.272727
12	122412571	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.363636
12	122412617	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.272727
6	122469474	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.130435
12	122627916	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
11	122658055	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122658056	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.333333
11	122658082	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122658083	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122658088	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122658125	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122683073	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122683433	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.111111
11	122729857	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
8	122809283	A->G	+	ENSG00000253372	AC016405.1	sense_intronic	Intergenic	.	.	Alu	0.3
8	122809288	A->G	+	ENSG00000253372	AC016405.1	sense_intronic	Intergenic	.	.	Alu	0.272727
9	122817647	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.133333
9	122817648	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.2
9	122817649	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.133333
9	122817657	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.230769
9	122817658	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.153846
9	122817662	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.333333
9	122817711	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.25
9	122817712	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.166667
9	122817720	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.272727
12	122869883	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.333333
9	122871618	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.0909091
9	122899208	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.166667
9	122899219	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.272727
9	122899231	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.153846
9	122901652	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.09375
9	122901657	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.0571429
9	122901687	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.0625
9	122901689	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.1
9	122901755	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.105263
9	122901756	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.227273
9	122901785	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.157895
9	122901792	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.157895
9	122901831	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.238095
9	122901876	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.133333
9	122902026	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.25
9	122902035	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.153846
10	123001072	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.266667
10	123001086	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.166667
10	123001144	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.272727
10	123001211	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.142857
10	123001248	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.133333
8	123032165	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.117647
8	123032232	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	123032237	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	123032921	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.2
8	123032923	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	123032924	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.363636
8	123032926	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.1
8	123032942	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.636364
8	123032954	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	123032961	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.133333
8	123032983	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.194444
8	123032990	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	123033000	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.676471
8	123033008	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.258065
8	123033022	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	123033025	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.388889
8	123033095	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.107143
8	123033138	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.423077
12	123158158	A->G	-	ENSG00000051825	MPHOSPH9	protein_coding	Intergenic	.	.	Alu	0.2
9	123251027	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.181818
9	123251044	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.142857
9	123256156	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.0952381
9	123256162	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.157895
9	123256217	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.2
9	123256235	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.0769231
9	123256243	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.130435
9	123256246	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.0952381
12	123323390	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.181818
12	123323418	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.357143
8	123344484	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.0465116
8	123350758	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.0704225
8	123351886	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	123373013	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.3
8	123373033	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	123379660	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	123379840	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123405269	A->G	-	ENSG00000183955	KMT5A	protein_coding	Intergenic	.	.	Alu	0.2
X	123672340	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.142857
X	123672371	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.181818
X	123678391	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.166667
X	123692640	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.117647
X	123692725	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.3
12	123755265	A->G	+	ENSG00000185344	ATP6V0A2	protein_coding	Intergenic	.	.	Alu	0.111111
12	123755282	A->G	+	ENSG00000185344	ATP6V0A2	protein_coding	Intergenic	.	.	Alu	0.08
12	123755389	A->G	+	ENSG00000185344	ATP6V0A2	protein_coding	Intergenic	.	.	Alu	0.105263
X	123972769	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.166667
X	123972841	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.25
X	123972942	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.194444
X	123972964	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.08
X	123973355	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.181818
X	123973391	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.181818
X	123973427	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.117647
X	123973723	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.133333
6	124004969	A->G	+	ENSG00000188580	NKAIN2	protein_coding	Intergenic	.	.	Alu	0.2
X	124042797	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.636364
X	124042894	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.363636
X	124085632	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.3
8	124356793	A->G	-	ENSG00000164983	TMEM65	protein_coding	Intergenic	.	.	Alu	0.117647
8	124356796	A->G	-	ENSG00000164983	TMEM65	protein_coding	Intergenic	.	.	Alu	0.125
8	124358025	A->G	-	ENSG00000164983	TMEM65	protein_coding	Intergenic	.	.	Alu	0.2
9	124382003	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.129032
9	124382014	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.25
9	124382038	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.358974
9	124382041	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.05
9	124382093	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.1
9	124382125	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.533333
9	124382131	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.857143
9	124382141	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.714286
9	124382424	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.35
9	124382432	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.0833333
9	124382435	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.136364
9	124382445	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.346154
9	124382480	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.277778
9	124382481	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.235294
9	124382483	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.235294
6	124398092	A->G	+	ENSG00000188580	NKAIN2	protein_coding	Intergenic	.	.	Alu	0.25
9	124403984	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.333333
9	124404089	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.166667
9	124730397	A->G	-	ENSG00000148200	NR6A1	protein_coding	Intergenic	.	.	Alu	0.181818
10	124776056	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.2
10	124808945	A->G	+	ENSG00000165660	ABRAXAS2	protein_coding	Intergenic	.	.	Alu	0.166667
10	124923332	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.3
10	124923339	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.6
10	124923365	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.2
10	124923406	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
10	124923408	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.416667
10	124923467	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.157895
10	124923474	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.36
10	124923500	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.157895
9	125132312	A->G	-	ENSG00000173611	SCAI	protein_coding	Intergenic	.	.	Alu	0.25
9	125132317	A->G	-	ENSG00000173611	SCAI	protein_coding	Intergenic	.	.	Alu	0.307692
9	125132391	A->G	-	ENSG00000173611	SCAI	protein_coding	Intergenic	.	.	Alu	0.15
9	125136738	A->G	-	ENSG00000173611	SCAI	protein_coding	Intergenic	.	.	Alu	0.2
9	125158697	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.217391
9	125158758	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.25
9	125158759	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.230769
9	125158772	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.153846
9	125159159	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
9	125159163	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.266667
9	125164509	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	1
9	125165864	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.0869565
9	125166699	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.0833333
9	125166703	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.0869565
9	125166737	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.0909091
9	125187058	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.153846
9	125187095	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.153846
9	125187114	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.0769231
9	125187150	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.09375
9	125187193	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.130435
9	125187308	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.0952381
9	125187309	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.105263
9	125187374	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.111111
9	125187440	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.153846
9	125187443	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.2
9	125187448	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.363636
8	125257074	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.230769
8	125268189	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.2
9	125317478	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.2
9	125317504	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.272727
9	125317505	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.166667
9	125317514	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.153846
3	125362841	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.166667
3	125363814	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.444444
3	125363857	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.6
3	125363895	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.125
9	125793264	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.25
9	125793272	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	126811057	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.214286
5	126820024	A->G	+	ENSG00000113368	LMNB1	protein_coding	Intergenic	.	.	Alu	0.153846
5	126820025	A->G	+	ENSG00000113368	LMNB1	protein_coding	Intergenic	.	.	Alu	0.153846
2	127334735	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.583333
2	127334737	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.333333
2	127334740	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127334742	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.4
2	127334909	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127349328	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127349370	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.230769
2	127366947	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.392857
2	127366999	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.115385
2	127367008	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.318182
2	127367009	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.227273
2	127367044	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127732334	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.3
2	127754622	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.142857
2	127754702	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
2	127783665	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.413793
2	127783716	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.0909091
2	127783733	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.157895
2	127783742	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.533333
2	127783769	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.153846
2	127783825	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.153846
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.354839
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
9	127791856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.106383
9	127791858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12766
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
9	127791894	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.155556
9	127791905	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127791963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
9	127791964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
9	127791997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
9	127792049	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.233333
9	127792212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127792218	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
9	127792360	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127792362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
9	127792385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
9	127792406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
9	127795050	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.333333
9	127795118	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.181818
9	127795154	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
9	127795155	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.103448
9	127795177	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.08
9	127795180	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.178571
9	127795186	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.2
9	127795390	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
9	127795481	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
9	127795556	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1875
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.357143
2	127796540	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.117647
2	127796554	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.8
2	127805216	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.12
9	127805286	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.277778
2	127805301	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.25
9	127805306	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.5
2	127805316	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.176471
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.789474
2	127805328	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.230769
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.894737
9	127805392	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.12
9	127805398	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.461538
2	127806305	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.133333
2	127809603	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
9	127822007	A->G	+	ENSG00000106991	ENG	protein_coding	Intergenic	.	.	Alu	0.333333
9	127906998	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	127979970	A->G	-	ENSG00000136715	SAP130	protein_coding	Intergenic	.	.	Alu	0.133333
4	128010450	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.2
4	128010659	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.272727
4	128010665	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.181818
9	128070772	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.153846
9	128070776	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.2
9	128070777	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.4
9	128070804	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.230769
9	128070830	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.117647
9	128070831	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.1875
9	128075580	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.416667
9	128075584	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.272727
9	128075655	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.333333
9	128075656	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.25
9	128075724	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.272727
2	128098629	A->G	+	ENSG00000136731	UGGT1	protein_coding	Intergenic	.	.	Alu	0.5
2	128098694	A->G	+	ENSG00000136731	UGGT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	128550835	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	128550923	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	128550924	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	128550965	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	128550989	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	128551005	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
7	128553310	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	128553311	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.28
7	128553328	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.263158
7	128553350	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
7	128553352	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0833333
7	128553506	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
7	128553528	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	128553615	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	128553694	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	128555024	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	128572380	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.121212
7	128572391	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.192308
7	128572518	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
7	128572519	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.380952
3	128601842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
3	128601843	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
3	128601894	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
3	128606248	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
9	128606325	A->G	+	ENSG00000197694	SPTAN1	protein_coding	Intergenic	.	.	Alu	0.333333
9	128606332	A->G	+	ENSG00000197694	SPTAN1	protein_coding	Intergenic	.	.	Alu	0.166667
3	128606355	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
3	128612473	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
7	128633660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	128633804	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	128633817	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
7	128633844	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
7	128633845	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
7	128655725	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
7	128655742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	128655743	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	128729490	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.115385
3	128729495	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.12
3	128732742	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0645161
3	128734152	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.363636
3	128734175	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128734180	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
3	128734228	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.105263
3	128734304	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.115385
3	128734310	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0740741
3	128734311	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.107143
3	128740654	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.3125
3	128740694	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.222222
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128744168	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.636364
7	128750081	A->G	+	ENSG00000128595	CALU	protein_coding	Intergenic	.	.	Alu	0.2
7	128750107	A->G	+	ENSG00000128595	CALU	protein_coding	Intergenic	.	.	Alu	0.4
3	128756216	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
9	128761372	A->G	-	ENSG00000160445	ZER1	protein_coding	Intergenic	.	.	Alu	0.363636
3	128811774	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.4
4	128965969	A->G	-	ENSG00000151466	SCLT1	protein_coding	Intergenic	.	.	Alu	0.818182
4	128965970	A->G	-	ENSG00000151466	SCLT1	protein_coding	Intergenic	.	.	Alu	0.7
7	129705829	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.142857
7	129843137	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.857143
7	129843163	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.25
9	129844505	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.142857
7	129847104	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.181818
7	129892091	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129894770	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
8	129897982	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129897985	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.636364
8	129898031	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	129898036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.117647
7	129906236	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.142857
7	129906273	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.333333
7	129906274	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129906342	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.25
7	129906349	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129906369	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.153846
7	129906381	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.166667
8	129910563	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3125
9	129913948	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.315789
9	129913964	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.222222
9	129913967	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.115385
9	129913971	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.24
9	129914012	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.157895
9	129914016	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129914020	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.111111
9	129914039	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.08
9	129914069	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.125
9	129914074	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.136364
9	129914098	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129921459	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	129921461	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.125
9	129921462	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	129921482	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	129921514	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129925776	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.3
9	129925849	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.277778
9	129925866	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129925874	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.25
9	129930231	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129930313	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.363636
9	129948427	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.357143
9	129948489	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129948503	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.416667
9	129950891	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129950931	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	130001625	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.363636
8	130001640	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	130001657	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.533333
8	130001661	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	130001667	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.8
8	130001735	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.28
8	130001747	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.115385
8	130001752	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	130001753	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	130004905	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	130005013	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.117647
8	130005039	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.375
8	130005040	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
9	130017708	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.214286
9	130017743	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	130017747	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	130031790	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	130031867	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	130041055	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.458333
9	130041112	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0588235
11	130298258	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.2
11	130298263	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.307692
11	130298267	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.230769
9	130582403	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.1
9	130704983	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	130704995	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	130705134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	130705267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	130705268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	130705284	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	130705317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130705341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705342	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	130705388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	130705471	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
9	130708727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
3	130871977	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
3	130936737	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.2
7	130962898	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.125
7	130963106	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.6
3	131008306	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.181818
3	131008307	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.181818
3	131008376	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.133333
2	131118611	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.166667
2	131118663	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.125
2	131118678	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.117647
2	131129204	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.25
2	131129275	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.142857
2	131129280	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.142857
2	131129604	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.2
5	131270120	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131270307	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131270330	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.133333
5	131276251	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.285714
5	131276338	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.4
5	131276342	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131276369	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131276374	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.115385
5	131292056	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0606061
5	131292125	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0540541
5	131292649	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131292791	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131292832	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131301548	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131319874	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0681818
5	131319897	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	131319898	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0344828
5	131319899	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0508475
5	131319900	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	131319901	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0344828
5	131319904	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.464286
5	131319930	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.121951
5	131319936	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.106383
5	131319957	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.09375
5	131319960	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0666667
5	131319983	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.461538
5	131319986	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.12
5	131319992	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.318182
5	131320271	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0465116
5	131320272	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0425532
5	131320285	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1
5	131320306	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.130435
5	131320565	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131320566	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131320595	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131338986	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.09375
5	131338993	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0555556
5	131339059	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0294118
5	131339101	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0384615
5	131339137	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0535714
5	131342225	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.363636
5	131342232	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131343605	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131368066	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131368068	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131368142	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0869565
9	131399401	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131399402	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131399432	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.133333
9	131424431	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.075
9	131424432	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.075
9	131424445	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.146341
9	131424453	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0465116
9	131424500	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.131579
9	131424501	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.342105
9	131424503	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0540541
9	131424559	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.108696
9	131424565	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.23913
9	131424566	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.275
9	131424607	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.09375
9	131424618	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0512821
9	131424625	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.352941
9	131424635	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0810811
9	131424636	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.289474
9	131426083	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.113636
9	131426100	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.122449
9	131426152	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.186047
9	131426154	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0222222
9	131426157	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.337209
9	131426160	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0581395
9	131426173	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.025974
9	131426185	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0273973
9	131426186	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0273973
9	131426187	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.057971
9	131426195	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0454545
9	131426211	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.164179
9	131426218	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.025974
9	131426231	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.464789
9	131426258	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.097561
9	131426287	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.173913
9	131426288	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.423077
9	131426323	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.5
9	131426324	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.142857
9	131448423	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.705882
9	131448583	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.368421
9	131462695	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.153846
9	131462731	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.272727
9	131462744	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131481216	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	131504096	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.454545
2	131504120	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.461538
2	131504124	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.384615
2	131504231	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.75
2	131506655	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.5
2	131506668	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.8
5	131511589	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.6
5	131511641	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.333333
5	131511661	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.307692
5	131647669	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.117647
5	131647670	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.375
5	131699490	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.157895
5	131699491	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.181818
9	131720013	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	131738885	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
5	131738892	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131738893	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131764342	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
5	131764405	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.214286
5	131766165	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.153846
5	131766189	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.117647
5	131766198	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
5	131775765	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.363636
12	131899848	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.181818
12	131899932	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.148148
12	131899961	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.0769231
12	131899970	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	131900023	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.105263
12	131900037	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.222222
12	131900038	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.125
12	131900042	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	131902952	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.266667
10	131903211	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0666667
10	131903217	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.166667
10	131903233	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.428571
10	131903234	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.136364
10	131903268	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.178571
10	131903285	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0555556
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	1
10	131903313	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.666667
10	131903336	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.138889
10	131903346	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0588235
10	131903369	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0689655
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.514286
10	131903387	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.269231
10	131903388	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.230769
9	132291275	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.133333
9	132291305	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.461538
9	132292768	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.333333
9	132339842	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.142857
9	132339888	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.25
5	132365692	A->G	-	ENSG00000233006	MIR3936HG	processed_transcript	Intergenic	.	.	Alu	0.181818
5	132365693	A->G	-	ENSG00000233006	MIR3936HG	processed_transcript	Intergenic	.	.	Alu	0.384615
5	132365698	A->G	-	ENSG00000233006	MIR3936HG	processed_transcript	Intergenic	.	.	Alu	0.166667
5	132480595	A->G	-	ENSG00000283782	AC116366.3	protein_coding	Intergenic	.	.	Alu	0.0769231
12	132652460	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.111111
12	132654345	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.0869565
12	132654368	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.315789
12	132656396	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.181818
12	132656456	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.166667
12	132656487	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.45
12	132685978	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.153846
5	132917823	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.21875
5	132917845	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.172414
5	132917850	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132917851	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.217391
5	132917877	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.107143
5	132917881	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0689655
5	132917883	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0606061
5	132917903	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.15
5	132917940	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132920079	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0909091
5	132920080	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0833333
5	132920142	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.285714
5	132920228	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132920243	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132921534	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132921536	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132921545	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0714286
5	132921571	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0666667
5	132921580	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0625
5	132921584	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.09375
5	132921585	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1875
5	132921608	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0740741
5	132921628	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1875
5	132921668	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132921905	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132921984	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132922064	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.4
5	132926620	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0789474
5	132926639	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.243243
5	132926691	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.190476
5	132942549	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132942701	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132951600	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132951604	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.133333
5	132951656	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.25
5	132951660	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0952381
5	132951666	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.210526
5	132951710	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.133333
5	132951736	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.571429
5	132959929	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.105263
5	132959945	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0869565
5	133078211	A->G	+	ENSG00000170606	HSPA4	protein_coding	Intergenic	.	.	Alu	0.142857
5	133078444	A->G	+	ENSG00000170606	HSPA4	protein_coding	Intergenic	.	.	Alu	0.230769
10	133294699	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.272727
10	133294700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.583333
10	133294732	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3
8	133497547	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.157895
8	133497565	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.230769
8	133497735	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.454545
8	133497764	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.416667
8	133505663	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.3
8	133520848	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.08
8	133520868	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.117647
8	133520880	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.142857
8	133530487	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.2
8	133562348	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.666667
3	133651289	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.235294
3	133651391	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.571429
3	133651462	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	133651463	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.153846
2	134128186	A->G	+	ENSG00000152127	MGAT5	protein_coding	Intergenic	.	.	Alu	0.133333
5	134379462	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.16
5	134379468	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.375
5	134379470	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.185185
5	134379484	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	134379526	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.075
5	134379552	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0681818
5	134379571	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0571429
5	134379590	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.421053
5	134379591	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.421053
5	134379596	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134382718	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134382719	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.142857
5	134382757	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.117647
5	134386148	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134386307	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.107143
5	134386401	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.115385
5	134386410	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0952381
5	134386415	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134386420	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.107143
5	134386467	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.103448
5	134386470	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.129032
5	134386472	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0588235
5	134386482	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0697674
5	134386485	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0714286
5	134386511	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0350877
5	134386512	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134386538	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0769231
5	134386544	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.04
5	134386560	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0392157
5	134386615	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0392157
5	134399804	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.142857
5	134399918	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.181818
5	134776279	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.3
5	134883414	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.181818
5	134883460	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.2
5	134883768	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.545455
5	134883835	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.125
5	134883836	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.166667
5	134883856	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.333333
5	134883909	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.166667
5	134884009	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.181818
5	134904056	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
5	134904126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	134929248	A->G	+	ENSG00000132570	PCBD2	protein_coding	Intergenic	.	.	Alu	0.25
5	134929259	A->G	+	ENSG00000132570	PCBD2	protein_coding	Intergenic	.	.	Alu	0.166667
2	135081186	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.214286
7	135474144	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.4
7	135474162	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.166667
7	135474199	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.115385
7	135474245	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.1
7	135474369	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.2
7	135474423	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.142857
7	135479271	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.125
7	135479305	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.294118
7	135479315	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	135479347	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.703704
7	135479377	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.125
7	135479382	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.136364
7	135479388	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.2
7	135479410	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.142857
7	135479419	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.166667
7	135479437	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.25
7	135479481	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.333333
7	135479482	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.210526
7	135496883	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.454545
7	135504433	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.229167
7	135504434	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.3125
2	135747160	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.142857
2	135747227	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.2
2	135747228	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.25
2	135747280	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.380952
2	135747290	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.518519
2	135747297	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0689655
2	135748843	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0606061
2	135748844	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0967742
2	135748848	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0689655
2	135748916	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0833333
2	135748943	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.15625
2	135748961	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0588235
2	135778056	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.176471
3	136159492	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.105263
3	136159502	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.166667
3	136356093	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.153846
3	136441131	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136441135	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
9	136458049	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.0869565
9	136458072	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.227273
3	136700949	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.111111
3	136700950	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.111111
3	136708958	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.583333
3	136715285	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.333333
X	136724350	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.230769
X	136724351	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.333333
X	136724357	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.461538
3	136729669	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.103448
3	136729670	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	136729711	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.117647
3	136735175	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0588235
3	136735178	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.125
3	136735180	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	136735234	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.08
3	136735241	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136735250	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.115385
3	136735264	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.153846
3	136735308	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	136735321	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.1
3	136735325	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.238095
3	136735376	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	136735377	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	136744814	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.131579
3	136744869	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	136744879	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	136744903	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	136744913	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	136744951	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.173913
3	136744955	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.615385
6	136759674	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.181818
6	136759697	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.117647
6	136759700	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.1875
X	136871784	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.222222
X	136871785	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.117647
X	136871858	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.111111
X	136877210	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.130435
X	136877220	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.117647
X	136877527	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.1
X	136877553	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.181818
X	136877559	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.0869565
X	136877588	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.0909091
X	136877589	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.0588235
3	136880030	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.5
3	136880133	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136880134	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.181818
5	137917238	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.153846
5	137923108	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.125
5	137923162	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	137923243	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.583333
5	137923253	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.3125
5	137923310	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.25
5	137976095	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.272727
5	137976105	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137979042	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0714286
5	137979150	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137979151	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.1875
5	137980519	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.117647
5	137980540	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137980581	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0952381
5	137980603	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.117647
5	137999192	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	138002303	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.4
5	138002307	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	138002346	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.521739
5	138002358	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.1
5	138002359	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.105263
5	138002407	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	138002409	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.576923
5	138002419	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.793103
5	138002445	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.526316
5	138002798	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.4
5	138002804	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.857143
5	138002810	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.142857
5	138030339	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.4
5	138030344	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.166667
5	138030371	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.142857
5	138030379	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.153846
5	138383829	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.2
5	138383830	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.6
5	138383938	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.166667
5	138383939	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.181818
5	138384863	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.166667
5	138403802	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.166667
5	138416328	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.181818
7	138476473	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.133333
7	138476482	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.1875
7	138476486	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.2
2	138505654	A->G	+	ENSG00000144228	SPOPL	protein_coding	Intergenic	.	.	Alu	0.121212
2	138505664	A->G	+	ENSG00000144228	SPOPL	protein_coding	Intergenic	.	.	Alu	0.0588235
7	138509448	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.642857
7	138509449	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.285714
7	138509537	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.0769231
7	138509584	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.1875
5	138524441	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	138524444	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.269231
5	138524458	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	138524506	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.09375
5	138524689	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.269231
5	138524706	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0810811
5	138524716	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0731707
5	138524742	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	138584601	A->G	+	.	.	.	Intergenic	.	.	Alu	0.769231
2	138584617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.529412
3	138708385	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.3
5	138908099	A->G	-	ENSG00000044115	CTNNA1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138978432	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.136364
6	138978509	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.466667
6	138984145	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.153846
6	138984262	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.142857
4	139051365	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.666667
4	139051370	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139051371	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139056253	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.105263
7	139056507	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.214286
7	139056522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.333333
7	139056567	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.210526
7	139056568	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.142857
7	139056578	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.105263
7	139056579	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.176471
7	139056626	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139056634	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.578947
7	139056657	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.117647
4	139088821	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139088896	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.466667
4	139088897	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139096582	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	139096586	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	139097599	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.153846
4	139098607	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139103026	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.8
4	139103032	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
7	139103179	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.111111
4	139106846	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.357143
4	139106865	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	139106876	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	139106881	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.470588
4	139106912	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139114447	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139114452	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.15
4	139114457	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.304348
4	139114486	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.173913
4	139114487	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.16
4	139114511	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.148148
4	139114516	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0714286
4	139114525	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.423077
4	139148449	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	139158319	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.3
4	139170467	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
5	139284349	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.133333
5	139284487	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.235294
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.176471
5	139284494	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.315789
5	139284535	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.666667
5	139284536	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.833333
5	139304268	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.423077
5	139304280	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139304289	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0571429
5	139304324	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.125
5	139304325	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.230769
5	139304379	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0392157
5	139304380	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0363636
4	139312766	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.181818
5	139338470	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
5	139338597	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
5	139338603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
5	139338607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
4	139341340	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.153846
4	139341452	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.133333
4	139341474	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.2
5	139348058	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139349788	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139349793	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139349850	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	139349917	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	139350107	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.3
5	139350510	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.3125
7	139368538	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.416667
7	139368563	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0857143
7	139368573	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0465116
7	139368595	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0740741
7	139368617	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0307692
7	139368650	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0425532
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.178571
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.212121
7	139378453	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.111111
7	139378475	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
3	139388658	A->G	-	ENSG00000184432	COPB2	protein_coding	Intergenic	.	.	Alu	0.117647
7	139396222	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.4
7	139396223	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.4
7	139396392	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139396406	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.307692
7	139396418	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139400075	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.181818
4	139400207	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.166667
4	139400795	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.25
4	139400829	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0869565
4	139400835	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.178571
4	139400871	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.125
4	139400885	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0869565
4	139400886	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.173913
4	139400894	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.380952
4	139400929	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.138889
4	139400956	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0465116
4	139400957	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0731707
4	139400969	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0454545
4	139400970	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0612245
4	139401020	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.047619
4	139401023	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.04
5	139568481	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139568527	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0833333
5	139568537	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.111111
5	139568601	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.208333
5	139568780	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139571286	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.142857
5	139571287	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139573181	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	139573195	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0740741
5	139587493	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.15
5	139587524	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.130435
5	139587527	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.1
5	139587528	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.210526
5	139587529	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.105263
5	139590248	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0697674
5	139590249	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.186047
5	139590254	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0526316
5	139590270	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0512821
5	139590277	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0526316
5	139590282	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.121951
5	139590284	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.131579
5	139590285	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0731707
5	139590314	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.102564
5	139590315	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.333333
5	139590341	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0645161
5	139590347	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.172414
5	139590392	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	139603708	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139603803	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139607773	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139607954	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.117647
X	139871482	A->G	-	ENSG00000101974	ATP11C	protein_coding	Intergenic	.	.	Alu	0.166667
4	140145773	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.133333
5	140422760	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.235294
5	140469269	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	140469270	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	140469390	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.0943396
5	140469404	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.0701754
5	140469451	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.128205
5	140469452	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.102564
5	140512154	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.133333
5	140536168	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.08
5	140536187	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.941176
5	140536193	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	140536194	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.217391
5	140536211	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.235294
5	140536223	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	140536233	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	140536355	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	140536356	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.352941
8	140536438	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.142857
5	140536760	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.15
5	140536769	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.217391
5	140536834	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	140536840	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.294118
5	140536847	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.105263
5	140536858	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.478261
5	140536861	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.142857
5	140536863	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	140536870	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	140536883	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.105263
5	140536900	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	140536910	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.272727
5	140536942	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.5
5	140536946	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.4375
5	140536955	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.545455
5	140536971	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.583333
5	140542438	A->G	+	ENSG00000213523	SRA1	protein_coding	Intergenic	.	.	Alu	0.230769
5	140542487	A->G	+	ENSG00000213523	SRA1	protein_coding	Intergenic	.	.	Alu	0.142857
5	140542551	A->G	+	ENSG00000213523	SRA1	protein_coding	Intergenic	.	.	Alu	0.294118
7	140798704	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.137931
7	140815171	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.352941
7	140815173	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.235294
7	140815235	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.5
7	140815266	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.181818
7	140815270	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.347826
7	140815302	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.210526
7	140815347	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.411765
7	140815348	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.357143
7	140815350	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.133333
7	140815412	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.105263
7	140815417	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.368421
7	140815418	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.111111
7	140815494	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.103448
7	140815510	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0833333
7	140815522	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.368421
7	140815530	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.117647
7	140815554	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.541667
7	140815566	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.5
7	140815571	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.192308
7	140815598	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.45
7	140815615	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.285714
7	140815664	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140815673	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.25
7	140821372	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140821375	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.222222
7	140873256	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.3
7	140897568	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0869565
7	140897616	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.235294
7	140902716	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.166667
7	140907367	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.3
7	140907400	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.3125
7	140907603	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.125
7	140909209	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.105263
8	141303090	A->G	-	ENSG00000022567	SLC45A4	protein_coding	Intergenic	.	.	Alu	0.333333
5	141531453	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.166667
7	141669311	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.181818
7	141669313	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.2
3	141988801	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.125
3	141988923	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	142052832	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.2
3	142090671	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.285714
3	142090725	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.466667
3	142090731	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.1875
5	142112731	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	142136977	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.294118
3	142323370	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.4
3	142323375	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.285714
3	142323727	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.2
3	142474055	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.117647
3	142482614	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.454545
3	142482615	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.3
3	142482753	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.5
3	142482754	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.333333
3	142483138	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.3
3	142543712	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.2
3	142543794	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.4
3	142543808	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.8
3	142543874	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.7
3	142543875	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.7
3	142543922	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.181818
5	142808114	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.222222
5	142808155	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.2
5	143048654	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.125
5	143048660	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.277778
5	143048661	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.352941
5	143048666	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.166667
5	143048892	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.3
2	143272510	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.277778
2	143272516	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.125
2	143272532	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	1
2	143272533	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.722222
2	143272538	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.15
2	143272578	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.545455
2	143272604	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.2
2	143272605	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.266667
2	143373375	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.9
2	143373376	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.8
2	143373445	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.166667
2	143373448	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.25
2	143373452	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.25
2	143373476	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.142857
2	143373483	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.1875
2	143373509	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.538462
2	143373515	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.538462
4	143394012	A->G	+	ENSG00000109458	GAB1	protein_coding	Intergenic	.	.	Alu	0.15
4	143394019	A->G	+	ENSG00000109458	GAB1	protein_coding	Intergenic	.	.	Alu	0.181818
4	143394153	A->G	+	ENSG00000109458	GAB1	protein_coding	Intergenic	.	.	Alu	0.545455
2	143605750	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.666667
2	143605827	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.192308
2	143605828	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.884615
2	143605915	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.142857
2	143605921	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.25
2	143605933	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.307692
2	143605956	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.384615
2	143605957	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.214286
2	143606023	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.222222
4	145176003	A->G	-	ENSG00000164164	OTUD4	protein_coding	Intergenic	.	.	Alu	0.235294
4	145176004	A->G	-	ENSG00000164164	OTUD4	protein_coding	Intergenic	.	.	Alu	0.111111
1	145774487	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.09375
1	145774514	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.16
1	145774639	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.272727
1	145775164	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.363636
1	145776233	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.266667
1	145776297	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.0909091
1	145776302	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.15
1	145776332	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.142857
1	145776333	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.1875
1	145776334	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.125
1	145776336	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.176471
1	145776346	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
1	145776383	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.238095
1	145776410	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.3125
1	145782014	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.580645
1	145782018	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.09375
1	145782031	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.0571429
1	145782151	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.277778
1	145782172	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.230769
1	145782177	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.454545
1	145782178	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145789536	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.0869565
1	145789563	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.1
1	145793981	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.214286
1	145793982	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.153846
1	145793992	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.181818
1	145794008	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
1	145794081	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.105263
1	145809453	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.133333
5	146249466	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.272727
5	146249524	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.142857
5	146249526	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.142857
5	146249527	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.214286
5	146249528	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.153846
5	146249536	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.214286
5	146249572	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.133333
5	146249579	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.266667
5	146487614	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0338983
5	146487624	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0862069
5	146487637	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0384615
5	146487650	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0416667
1	146941709	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.466667
7	148838197	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.0689655
7	148838213	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.0689655
7	148838246	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.142857
7	148838268	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.166667
7	148839673	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.4
7	148869435	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.208333
7	148869436	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	148869443	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.235294
7	148869484	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.15
7	148869494	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.136364
7	148869538	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148869557	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.363636
7	148869632	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148871672	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.272727
7	148871699	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148871713	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.384615
7	149243206	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.0869565
7	149243210	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.166667
7	149243230	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.1
7	149243246	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.166667
7	149243250	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.5
7	149243272	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.1875
7	149243295	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.111111
7	149243299	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.238095
7	149245184	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.333333
7	149245188	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.181818
7	149245231	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.133333
7	149245257	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.25
7	149245293	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.133333
6	149348191	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.25
6	149348211	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.1
6	149348262	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.157895
6	149348268	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.176471
6	149348331	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.176471
6	149348700	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	149348708	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.105263
6	149348846	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.117647
6	149349237	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.666667
6	149349273	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.12
5	149510381	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0512821
5	149510423	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.075
6	149583209	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149583210	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.214286
6	149583282	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.125
6	149583286	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149583287	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.142857
6	149583298	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.136364
6	149583312	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.142857
6	149583316	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149583342	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	149583348	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.105263
6	149583356	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.117647
6	149583420	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.0833333
6	149583447	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.08
6	149600483	A->G	+	ENSG00000186625	KATNA1	protein_coding	Intergenic	.	.	Alu	0.2
6	149713722	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.117647
6	149713756	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150309561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	150309562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
1	150337614	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.333333
1	150340778	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.181818
1	150340877	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.2
1	150340885	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.538462
1	150340930	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.142857
5	150365125	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.5
5	150365135	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	150365159	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.147059
5	150365174	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.0454545
5	150365191	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.4
5	150365195	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.6
5	150365201	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.5
5	150365217	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.266667
5	150365297	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.375
5	150365298	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.347826
1	150378773	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.3
1	150379036	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.25
1	150379054	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.210526
1	150379079	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.142857
1	150379095	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.142857
4	150398681	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150398712	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.3
3	150570443	A->G	+	ENSG00000144895	EIF2A	protein_coding	Intergenic	.	.	Alu	0.142857
3	150570452	A->G	+	ENSG00000144895	EIF2A	protein_coding	Intergenic	.	.	Alu	0.181818
1	150570876	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.294118
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.238095
1	150572351	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0869565
1	150591228	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
1	150591235	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	150602478	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.142857
1	150617918	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
5	150713546	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.428571
5	150713582	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.142857
5	150713608	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.307692
5	150713716	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.2
5	150713717	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.181818
5	150728908	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0416667
5	150728938	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0769231
5	150728940	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.142857
5	150728943	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.111111
5	150728966	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0540541
5	150728970	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0882353
5	150729137	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.130435
4	150738076	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.176471
4	150738080	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.166667
4	150738083	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.277778
4	150738102	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.4
4	150738115	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.0952381
4	150738135	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.16
4	150738164	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.0714286
4	150738167	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.115385
4	150738168	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.0714286
4	150738169	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.111111
4	150738170	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.25
4	150738173	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.777778
4	150738209	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.0769231
4	150738228	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.0952381
4	150738241	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.277778
4	150738270	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.117647
3	150755423	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.125
4	150786376	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.166667
4	150786382	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.166667
4	150786440	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.3
4	150788141	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.151515
4	150788149	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.103448
4	150788164	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.206897
4	150788201	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.05
4	150788211	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.321429
4	150788224	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.117647
4	150788302	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.230769
5	150788554	A->G	+	ENSG00000256235	SMIM3	protein_coding	Intergenic	.	.	Alu	0.125
4	150841715	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.230769
4	150841781	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.05
4	150841791	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.047619
4	150841852	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.0869565
4	150841853	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.304348
4	150841859	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.423077
4	150841861	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150841920	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.111111
4	150865911	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
1	150931505	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150957952	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.785714
1	150958004	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.666667
1	150958019	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.461538
1	150958021	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.214286
1	150958064	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	150958086	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.266667
1	150958103	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.428571
1	150958104	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.470588
1	150958117	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	150958451	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.4
1	150958455	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.214286
1	150958479	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.8
1	150958484	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150958522	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	150958525	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.157895
6	150985404	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.272727
6	150985426	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.583333
6	150985481	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.230769
6	150985485	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.153846
6	150985500	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.214286
6	150985503	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.214286
6	150985541	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.166667
6	150985567	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.181818
6	150985581	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.153846
6	150985589	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	150993344	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.2
1	150993381	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.153846
1	150993382	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.615385
1	150993446	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.142857
1	150993449	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.214286
1	150993486	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.181818
1	150993488	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.181818
4	151110676	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	151110766	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.047619
4	151110792	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0384615
4	151110795	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.264151
4	151110851	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.204545
4	151115789	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0512821
4	151115804	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.047619
4	151115805	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.047619
4	151119491	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1
4	151119505	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.15
4	151120063	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0606061
4	151120109	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.047619
4	151120113	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0571429
4	151120140	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0952381
4	151125592	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0487805
4	151125599	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0555556
4	151125702	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1
4	151125705	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151125731	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.111111
4	151125737	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0833333
4	151125758	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0666667
4	151125777	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0833333
4	151125795	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151126584	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0689655
4	151126592	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3
4	151126595	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0869565
4	151126607	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151126644	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1
4	151130761	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151130834	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.285714
4	151130862	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.217391
4	151130889	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151130890	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.25
4	151130928	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.121212
1	151203633	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	151203749	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.1
1	151203779	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	151218707	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.272727
1	151218713	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.272727
1	151218790	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.4
1	151223868	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	151281303	A->G	+	ENSG00000144893	MED12L	protein_coding	Intergenic	.	.	Alu	0.111111
6	151304234	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.125
6	151304342	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.181818
6	151304368	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.25
6	151304369	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.363636
6	151394128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	151397758	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	151397788	A->G	+	.	.	.	Intergenic	.	.	Alu	0.555556
6	151397825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	151397955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	151397956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
2	151420526	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151420622	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.125
2	151420638	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.3125
2	151420639	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	151434993	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.210526
1	151434997	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.210526
1	151434998	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.111111
1	151435003	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.1
1	151435009	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.105263
1	151435038	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151436094	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.117647
1	151436124	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151436208	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
1	151436213	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151436504	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.545455
1	151436516	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.0909091
1	151436555	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.185185
1	151436569	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.0740741
1	151436581	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.304348
1	151436582	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.0869565
1	151436604	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.294118
1	151447519	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.153846
1	151447528	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.230769
1	151447549	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.266667
1	151447575	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.384615
1	151447685	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151447686	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.4
1	151447717	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.133333
1	151447736	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.357143
1	151447745	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
1	151450062	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
1	151450065	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3125
1	151450134	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.277778
1	151450137	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.333333
1	151450170	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.285714
1	151450210	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.277778
1	151450211	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.157895
1	151450235	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.176471
1	151450236	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.176471
1	151452970	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.133333
1	151453047	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.363636
1	151455942	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.142857
1	151455993	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.117647
1	151456015	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151456016	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.416667
1	151456024	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
7	151496912	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.1
7	151496918	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.333333
7	151511737	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.142857
5	151732178	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
5	151789920	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	151793893	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.6
5	151793903	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.1
5	151793907	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.515152
5	151793920	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	151793934	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.25
7	152158583	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0909091
7	152158601	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	152175211	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152175218	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152175228	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152241260	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1
7	152241296	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0769231
7	152241297	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.111111
7	152241338	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.176471
3	152275449	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.12
3	152275629	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.1
7	152309421	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1875
7	152309632	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.056338
3	152329578	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0540541
7	152391380	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.12
7	152391386	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0625
7	152391406	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.363636
7	152391410	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.147059
7	152391411	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.15625
7	152391412	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0588235
7	152391417	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.16
7	152391418	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.230769
7	152391437	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152391438	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.642857
7	152391445	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0909091
7	152391484	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	152391716	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1
7	152391730	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152391731	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152391732	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152391736	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.277778
7	152391792	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.411765
7	152401224	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152401273	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.75
7	152401274	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.333333
7	152404975	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152404999	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3
7	152405334	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0540541
7	152405347	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.114286
7	152405382	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152405385	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.192308
7	152405409	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.107143
7	152405422	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0606061
7	152405438	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1
7	152405517	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.08
7	152414664	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152414689	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152414911	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.105263
7	152426316	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.12
7	152426330	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152426436	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152426450	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152426457	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
4	152521884	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.0769231
2	152675913	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.166667
1	153666321	A->G	-	ENSG00000143621	ILF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	153669565	A->G	-	ENSG00000143621	ILF2	protein_coding	Intergenic	.	.	Alu	0.2
1	153846409	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.214286
1	153846764	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	153846805	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153860027	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.5
1	153860048	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
1	153860079	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153860204	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
1	153878356	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
1	153878380	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
1	153886600	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
1	153886601	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.363636
1	153886613	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.230769
1	153886700	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
1	153886760	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.4
1	153886764	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153907685	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
1	153907735	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	153907771	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
X	154052530	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154052590	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154052599	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154066035	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154066060	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154066072	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.5
X	154066123	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.217391
X	154066126	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.1
X	154066127	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.1
X	154066129	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.222222
X	154066130	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.105263
X	154066133	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.111111
X	154066137	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.35
X	154066138	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.315789
X	154066139	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154066185	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.291667
X	154066190	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.15
X	154066204	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.26087
X	154066208	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.428571
X	154066209	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0952381
X	154066230	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0952381
X	154066231	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154066239	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0952381
X	154066320	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.125
X	154066339	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0869565
X	154066355	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.111111
X	154066358	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154066362	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.125
X	154066389	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.176471
X	154069046	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154069072	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.5
X	154070851	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.333333
X	154070855	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.444444
X	154070869	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.307692
X	154081077	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154081112	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.263158
X	154081143	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.157895
X	154081366	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154087668	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154087731	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.153846
1	154162939	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.125
1	154162957	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.111111
1	154162975	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.117647
1	154164234	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.142857
1	154174619	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.133333
1	154174632	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.285714
6	154738064	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3
5	154764784	A->G	+	ENSG00000155506	LARP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	154764802	A->G	+	ENSG00000155506	LARP1	protein_coding	Intergenic	.	.	Alu	0.235294
6	154793665	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.130435
6	154793668	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.217391
6	154793681	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.153846
6	154793695	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.125
6	154793721	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.125
6	154793736	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.4
6	154825776	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	154825794	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3
6	154825810	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.5
5	154866793	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.666667
5	154866806	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.214286
5	154866828	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.5
3	155093717	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.25
3	155093736	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.363636
3	155093816	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.176471
3	155098513	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.272727
3	155107168	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.583333
3	155107170	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.307692
3	155107197	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.454545
3	155107232	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.454545
3	155107233	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.727273
3	155107238	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.272727
3	155107328	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.272727
3	155107332	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.3
1	155527745	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155538496	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.230769
1	155538609	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.08
1	155538763	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.153846
1	155539205	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.125
1	155547007	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0909091
1	155547010	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.105263
1	155547020	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0869565
1	155547021	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.173913
1	155547049	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0666667
1	155547117	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0638298
1	155547132	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0952381
1	155547148	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0606061
1	155547170	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0384615
1	155547179	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.27907
1	155547185	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0540541
1	155553893	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.1875
1	155553951	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.111111
1	155557401	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.142857
1	155558648	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	155558731	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.111111
1	155558807	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.266667
1	155558933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.304348
1	155559008	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.153846
1	155559020	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155559026	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155559037	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.2
1	155559039	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.133333
1	155559111	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.142857
1	155559112	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.285714
1	155681903	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.148148
1	155681904	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155681957	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	155684633	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155684636	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.4
1	155684653	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.277778
1	155684701	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0967742
1	155684714	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.37037
1	155684724	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.321429
1	155684730	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	155684750	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	155684757	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.08
1	155684779	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.375
1	155684780	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.1875
1	155684781	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155684787	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155684813	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.285714
1	155684858	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.588235
1	155684859	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	155919060	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	155919105	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.411765
1	155919106	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.388889
1	155922235	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0769231
1	155922242	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.333333
1	155922243	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.108108
1	155922244	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.473684
1	155922274	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0350877
1	155922278	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0535714
1	155922284	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0740741
1	155922294	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0625
1	155922310	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.04
1	155922316	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0377358
1	155922328	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.236842
1	155922342	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.047619
1	155922351	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.125
1	155922374	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.115385
1	155922382	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.133333
1	155922387	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.5
1	155922396	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0588235
1	155922417	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.30303
1	155922418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.242424
1	155924337	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0625
1	155924338	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0882353
1	155924341	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0588235
1	155924347	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.147059
1	155924357	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	1
1	155924413	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	1
1	155924417	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.125
1	155924418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.32
1	155936737	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	155937122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
1	155937143	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
1	155937469	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
1	155937473	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
1	155937495	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	155937496	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	155937522	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
4	155937680	A->G	-	ENSG00000256043	CTSO	protein_coding	Intergenic	.	.	Alu	0.142857
4	155937687	A->G	-	ENSG00000256043	CTSO	protein_coding	Intergenic	.	.	Alu	0.153846
4	155937707	A->G	-	ENSG00000256043	CTSO	protein_coding	Intergenic	.	.	Alu	0.818182
1	155938908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
1	155939136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	155939316	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
1	155939511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	155939533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	155939547	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	155939550	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	156129578	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	156129654	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	156129667	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
6	156129691	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	156129769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.352941
6	156129782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
6	156129783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
6	156156085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	156195858	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
6	156195861	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
6	156195875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
1	156224617	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.578947
1	156224643	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.6
1	156224649	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.421053
1	156224653	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.352941
1	156231050	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.2
1	156231387	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.166667
1	156231447	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.133333
1	156553848	A->G	-	ENSG00000183856	IQGAP3	protein_coding	Intergenic	.	.	Alu	0.4
7	156710043	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.133333
7	156710069	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.2
6	156835051	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	156835055	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.545455
6	156835060	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.166667
6	156835094	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	156835119	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.166667
6	156835125	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.136364
6	156835146	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.12
6	156946079	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.571429
6	156946102	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	156946171	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0952381
6	156946238	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0444444
6	156946257	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0612245
6	156946279	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0571429
6	157054103	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.333333
6	157054104	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	157114339	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.333333
6	157114381	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.352941
6	157114403	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.294118
6	157114413	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.333333
6	157114417	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.4375
6	157114445	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	157114469	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	157114479	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	157127841	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	157127855	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
5	157274014	A->G	+	ENSG00000055163	CYFIP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	157274024	A->G	+	ENSG00000055163	CYFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	157306784	A->G	+	ENSG00000055163	CYFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157306789	A->G	+	ENSG00000055163	CYFIP2	protein_coding	Intergenic	.	.	Alu	0.2
2	157332152	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	157332153	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	157332218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
2	157332247	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	157332272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
5	157386734	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.142857
5	157386743	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.0625
5	157386773	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.28125
5	157386800	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.0769231
5	157386805	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.1
5	157386813	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.393939
5	157386841	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.117647
5	157386864	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.25
5	157386865	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.1875
5	157386870	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.214286
5	157831285	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	157831838	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.357143
5	157831862	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.105263
5	157831895	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.285714
5	157838305	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
6	157915678	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.166667
6	157915704	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.5625
6	157915718	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.105263
7	158626249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	158643785	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.2
3	158689657	A->G	+	ENSG00000168827	GFM1	protein_coding	Intergenic	.	.	Alu	0.235294
7	158777062	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.192308
4	158780134	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.375
4	158780149	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.333333
4	158780153	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.233333
7	158789445	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0789474
7	158789449	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0555556
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.175
7	158789459	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.235294
7	158789468	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0526316
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.323529
7	158789494	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.133333
7	158789495	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.275862
7	158789544	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.4375
7	158789612	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.285714
7	158789613	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.285714
7	158789614	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.214286
6	158791980	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.3
6	158791981	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.2
7	158792298	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158792865	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.136364
7	158792880	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.117647
7	158792907	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158792989	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.518519
7	158793024	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0625
7	158793035	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0810811
7	158793041	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.314286
6	158798793	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.222222
7	158799873	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.461538
7	158800322	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	158800326	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.173913
7	158800640	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0606061
7	158800679	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0689655
7	158937820	A->G	+	ENSG00000126870	WDR60	protein_coding	Intergenic	.	.	Alu	0.153846
4	159121927	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.0666667
4	159121980	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.3
4	159121984	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.190476
4	159121989	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	1
4	159237797	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.272727
4	159237817	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.3
2	159606980	A->G	-	ENSG00000123636	BAZ2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	159606987	A->G	-	ENSG00000123636	BAZ2B	protein_coding	Intergenic	.	.	Alu	0.166667
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.75
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.4
2	159734875	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0645161
2	159734888	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.1875
2	159734892	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.242424
2	159734924	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0740741
6	159783472	A->G	-	ENSG00000120438	TCP1	protein_coding	Intergenic	.	.	Alu	0.2
1	159890952	A->G	-	ENSG00000213085	CFAP45	protein_coding	Intergenic	.	.	Alu	0.4
1	159890986	A->G	-	ENSG00000213085	CFAP45	protein_coding	Intergenic	.	.	Alu	0.4
5	160013664	A->G	+	ENSG00000113312	TTC1	protein_coding	Intergenic	.	.	Alu	0.2
1	160302627	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.125
1	160302687	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.0597015
1	160302693	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.4
1	160302719	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.047619
1	160302757	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.382353
1	160302759	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.666667
1	160302826	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.4
1	160302943	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.666667
1	160302981	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.1875
1	160302988	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.588235
1	160302990	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.588235
1	160303033	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.222222
1	160303049	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.111111
1	160303051	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.111111
6	167006472	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.181818
6	167009272	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.7
6	167009332	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.5
6	167009389	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.153846
6	167020762	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.142857
6	167020794	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.181818
2	168735694	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.357143
2	168735783	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.142857
2	169590041	A->G	+	ENSG00000138398	PPIG	protein_coding	Intergenic	.	.	Alu	0.2
5	169929662	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.6
3	169973484	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.2
3	169973542	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.111111
3	169973584	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.416667
1	169993175	A->G	-	ENSG00000075945	KIFAP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	169993271	A->G	-	ENSG00000075945	KIFAP3	protein_coding	Intergenic	.	.	Alu	0.5
3	170146985	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.105263
3	170147064	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.2
3	170152231	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.3
3	170152309	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.3
3	170152458	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.181818
3	170152733	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.25
3	170242306	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.3
3	170242361	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.117647
3	170242391	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.266667
3	170277122	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.3
3	170277126	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.5
1	171492869	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.307692
1	171492932	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.117647
1	171492935	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.642857
1	171492937	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.133333
1	171492985	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.444444
1	171499683	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.181818
1	171499684	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.25
1	171499689	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.230769
1	171499693	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171499706	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.133333
1	171499710	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.176471
1	171499754	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.190476
2	171765538	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	171765539	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
2	171765697	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	171765838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	171765839	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
2	171765855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	171765879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	171765880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
5	171924053	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.384615
5	171924063	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.384615
2	171935712	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.181818
2	171935782	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.1875
2	171935796	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.357143
5	171998442	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.2
5	171998447	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.357143
5	171998448	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.214286
5	172002907	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.117647
3	172053752	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172179644	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.272727
3	172179648	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	172179649	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.285714
3	172179704	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.454545
3	172179731	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172179736	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172179762	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.357143
3	172179840	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172386595	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172386621	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.3125
5	173082722	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.157895
5	173082788	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.125
5	173082802	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.214286
5	173082826	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.2
4	173176017	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.136364
4	173176018	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.0833333
4	173176036	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.0909091
4	173209949	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.105263
4	173210010	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.2
1	173847949	A->G	-	ENSG00000117593	DARS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	173847950	A->G	-	ENSG00000117593	DARS2	protein_coding	Intergenic	.	.	Alu	0.1
2	173946800	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0526316
2	173946918	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.12
2	173946963	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0666667
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.111111
2	173946982	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0714286
1	173990257	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
1	174003115	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
1	174003122	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	174003265	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.230769
1	174003275	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.4
1	174003340	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.454545
1	174003790	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	174003798	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.125
1	174003800	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.25
1	174003836	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
1	174003856	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
1	174003857	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.153846
1	174003864	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
1	174003866	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
1	174003933	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.15
1	174003934	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.315789
1	174003950	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.153846
1	174016505	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
1	174016518	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.5
2	174218959	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.4
2	174219044	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.357143
2	174219068	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.307692
2	174219094	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.230769
2	174219095	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.153846
2	174219097	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.583333
2	174219515	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.307692
2	174219527	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174219584	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.736842
2	174219596	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.2
2	174219597	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	174219625	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.142857
2	174219631	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.117647
2	174219648	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.357143
2	174219668	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174219689	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.4375
2	174219695	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.125
2	175141528	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.230769
2	175141590	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.5
2	175141703	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.272727
2	175142306	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.142857
5	175504388	A->G	+	ENSG00000164466	SFXN1	protein_coding	Intergenic	.	.	Alu	0.3
5	175504389	A->G	+	ENSG00000164466	SFXN1	protein_coding	Intergenic	.	.	Alu	0.2
1	175968005	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	175968006	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	176041440	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.4
1	176041456	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.75
1	176041462	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.25
1	176041509	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.214286
1	176041513	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.266667
1	176041519	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	176041526	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.277778
1	176041531	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	176041542	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	176048252	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176064716	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	176065775	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	176065800	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176065999	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176070404	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176070433	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	176141828	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.461538
5	176454471	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.08
5	176454493	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.1
5	176454549	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.214286
5	176496246	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.307692
5	177071423	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.0952381
5	177071432	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.210526
3	177152408	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.214286
3	177152424	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	177188025	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
2	177228068	A->G	+	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0454545
2	177246692	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0512821
2	177246707	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0625
2	177246871	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	178217290	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.538462
5	178217300	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.125
5	178217314	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.529412
5	178217346	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.25
5	178217386	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.142857
5	178217401	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.333333
5	178217404	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.3
5	178217455	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.133333
5	178217456	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.125
5	178217483	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.153846
5	178217489	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.133333
5	178217679	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.25
5	178217680	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.272727
5	178217681	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.666667
5	178217695	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.0967742
5	178217738	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.6
5	178217770	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.3
2	178434213	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.2
2	178435335	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.153846
3	179173458	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.321429
3	179173464	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.172414
3	179173468	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.103448
1	179213396	A->G	-	ENSG00000143322	ABL2	protein_coding	Intergenic	.	.	Alu	0.214286
1	179213421	A->G	-	ENSG00000143322	ABL2	protein_coding	Intergenic	.	.	Alu	0.2
3	179444652	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.142857
3	179445342	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.166667
3	179445347	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.818182
3	179445361	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.153846
3	179445401	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.5
3	179445413	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.384615
5	179745988	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.2
5	179747555	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.125
5	179747556	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.1875
5	179747561	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.142857
5	179747689	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.214286
5	179752144	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.285714
5	179752179	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.181818
5	179786169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
5	179786172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.75
5	179786203	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
5	179829818	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	179829832	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	179829840	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.357143
5	179829841	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.428571
5	179829847	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	179829862	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.266667
5	179829867	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.1875
5	179829900	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.1
5	179829945	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.2
5	179829987	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.5
5	179830029	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	179987388	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.0909091
5	180033102	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.357143
5	180033106	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.285714
5	180033232	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.1
5	180033233	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.15
5	180033268	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.384615
5	180039282	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.0909091
5	180039300	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.0952381
5	180039312	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.0952381
5	180039316	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.12
5	180039332	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.08
5	180039337	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.0909091
5	180039409	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.222222
1	180422268	A->G	-	ENSG00000230124	ACBD6	protein_coding	Intergenic	.	.	Alu	0.214286
5	180497108	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.454545
5	180497113	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.4
5	180497248	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.2
5	180525387	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.181818
5	180525425	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.272727
1	180636805	A->G	+	ENSG00000143324	XPR1	protein_coding	Intergenic	.	.	Alu	0.153846
1	180636931	A->G	+	ENSG00000143324	XPR1	protein_coding	Intergenic	.	.	Alu	0.25
3	180917694	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.117647
3	180917737	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	180917765	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.266667
3	180917797	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180917826	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	180917836	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	180917844	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.206897
3	180917867	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180921247	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180921248	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.214286
3	180930777	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	180930780	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	180930856	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	180930870	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.103448
3	180930874	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	180930875	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	180930877	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0625
3	180930879	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.103448
3	180930882	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	180930884	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0555556
3	180930886	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0857143
3	180930935	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	180930949	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.5
3	180942101	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180942123	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.222222
3	180942124	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.470588
3	180942257	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.444444
3	180942267	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.1
3	180942299	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	180942319	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180942348	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.111111
3	182797652	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.307692
3	182830248	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	182841729	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182841730	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.4
3	182841828	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182841829	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182841832	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182841864	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.117647
3	182894860	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.583333
3	182894862	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.5
3	182894884	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.3
3	182894908	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182894916	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.384615
3	182894934	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.714286
3	182894942	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.272727
3	182894947	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182894979	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.142857
3	182895005	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.08
3	182901044	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.272727
3	182906910	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.769231
3	182907050	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.153846
3	182907075	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.363636
3	183031666	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.133333
3	183031744	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.105263
3	183031748	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.117647
3	183639070	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.333333
3	183639122	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.333333
3	183639818	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0384615
3	183639822	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0444444
3	183646136	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.230769
3	183646175	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0740741
3	183646215	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0666667
3	183646276	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0465116
3	183647149	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.363636
3	183647174	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.157895
3	183647295	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0909091
3	183647309	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.214286
3	183647650	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.125
3	183656908	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.454545
3	183673076	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.153846
3	183673085	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0740741
3	183673098	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.208333
3	183673117	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.15
3	183675661	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0888889
3	183675675	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0545455
3	183675695	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.1
3	183675730	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0285714
3	183741727	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.636364
3	183741731	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.272727
3	183764224	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.235294
3	183764264	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.181818
3	184318953	A->G	+	ENSG00000114867	EIF4G1	protein_coding	Intergenic	.	.	Alu	0.2
3	184318954	A->G	+	ENSG00000114867	EIF4G1	protein_coding	Intergenic	.	.	Alu	0.3
2	184703535	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.181818
4	184781676	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.15
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.25
4	184781706	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.210526
4	184781747	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.285714
4	184781748	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.347826
4	184781774	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.130435
4	184781807	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.125
4	184781814	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.153846
4	184781892	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.384615
1	184806883	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.647059
1	184806896	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.210526
1	184806906	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.190476
1	184806912	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.157895
1	184955454	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.230769
1	184960726	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.111111
1	184960731	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	184960757	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.105263
1	184960767	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.444444
1	184960769	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.611111
1	184960800	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.117647
1	184960824	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.133333
1	184960831	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.25
1	184960833	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.176471
1	184961266	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.222222
1	184961267	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.294118
3	185616514	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185626892	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.105263
3	185626899	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.157895
3	185707103	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185707112	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185707142	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.538462
3	185707143	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.538462
3	185707375	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.125
3	185707376	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.142857
3	185707390	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.538462
3	185707433	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	185707437	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	185757658	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	185757668	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	185757669	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	185757678	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.333333
3	185788791	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.12
3	185788807	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.24
3	185788811	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185788850	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.0967742
3	185788851	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.09375
3	185788891	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	185788914	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.384615
3	185788950	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.428571
3	185788959	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	185788968	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	1
3	185788992	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.157895
3	185789023	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.125
3	185789830	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.214286
3	185789845	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	185789871	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.214286
3	185789872	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	185789922	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.111111
3	185789928	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.111111
3	185789935	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.125
3	185794933	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.111111
3	185798937	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185798989	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	185798999	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.5625
3	185799048	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.307692
3	185799049	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.384615
3	185799071	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.6
3	185799276	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.8
3	185799286	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
2	186645713	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.3
2	186645748	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.25
2	186645780	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.5
2	186645790	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.636364
2	186645806	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.166667
2	186645812	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.181818
2	186645825	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.3
2	186645851	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.4
2	190886687	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.269231
2	190886751	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.117647
2	191075943	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.545455
2	191075948	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.545455
3	193629553	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.153846
3	193629579	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.333333
3	193629606	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.461538
3	193629609	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.416667
3	194650016	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.117647
3	194650017	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.368421
3	194650058	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.692308
3	194650113	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.277778
3	194650114	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.1
3	194650115	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	194650123	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.173913
3	194650151	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.2
3	194650152	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.272727
3	194650185	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.75
3	194650186	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.117647
3	194650191	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.588235
3	194650192	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.529412
3	195321285	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0909091
3	195321308	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.15
3	195321325	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0769231
3	195321360	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.16129
3	195321361	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.129032
3	195374812	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.5
3	195377223	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0769231
3	195417012	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.131579
3	195417044	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0555556
3	195417050	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.121212
3	195417109	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195417110	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195417159	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.290323
3	195417175	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0666667
3	195417183	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.09375
3	195417205	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.1
3	195438163	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.35
3	195438164	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.190476
3	195438270	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195439300	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195439424	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.277778
3	195526910	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.2
3	195890618	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.615385
3	195890621	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.153846
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.133333
2	196161721	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.117647
2	196162632	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0454545
2	196162768	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0869565
2	196162781	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0769231
2	196162782	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.269231
3	196363033	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.2
3	196363175	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.272727
3	196363176	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.333333
3	196363184	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.272727
3	196482040	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.125
3	196484238	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.133333
3	196484296	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.133333
3	196484310	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.185185
3	196484336	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196484379	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.142857
3	196484566	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.105263
3	196642991	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.2
3	196648489	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.166667
3	196648511	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.0714286
3	196648512	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.0666667
3	196648528	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.0909091
3	196648547	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.09375
3	196648552	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.3
3	196648565	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.142857
3	196648566	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.181818
3	196648596	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.142857
3	196648619	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.166667
3	196648623	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.230769
3	196648646	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.142857
3	196815666	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.153846
3	196869596	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.615385
3	196904669	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196904678	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	196906073	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.428571
3	196906099	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196906109	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.470588
3	196907218	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.1
3	196907269	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196907286	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.1
3	196907301	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.133333
3	196907327	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.291667
3	196907353	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.205882
3	196908569	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.230769
3	196908735	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.117647
3	196908738	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	196911437	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.214286
3	196911507	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.111111
3	196911632	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.105263
3	196911690	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.1
3	196927532	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.153846
2	197258374	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.0952381
2	197265387	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
2	197286403	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.0588235
2	197286597	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
2	197289998	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.0909091
2	197289999	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.0952381
2	197290031	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
2	197431201	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.142857
2	197431214	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.428571
2	197431215	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.2
2	197431395	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.125
2	197463365	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.411765
2	197463393	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.105263
2	197468322	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.181818
3	197833418	A->G	+	ENSG00000186001	LRCH3	protein_coding	Intergenic	.	.	Alu	0.666667
1	198173227	A->G	+	ENSG00000151414	NEK7	protein_coding	Intergenic	.	.	Alu	0.272727
1	198173308	A->G	+	ENSG00000151414	NEK7	protein_coding	Intergenic	.	.	Alu	0.117647
1	198666103	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.0714286
2	200916973	A->G	-	ENSG00000115942	ORC2	protein_coding	Intergenic	.	.	Alu	0.181818
2	200966609	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.2
2	200966613	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.3
2	200966618	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.4
2	200966626	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.5
2	200966653	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.2
2	200966692	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.333333
2	200966728	A->G	+	ENSG00000183308	AC005037.1	antisense	Intergenic	.	.	Alu	0.230769
2	201066166	A->G	-	ENSG00000155744	FAM126B	protein_coding	Intergenic	.	.	Alu	0.133333
2	201066170	A->G	-	ENSG00000155744	FAM126B	protein_coding	Intergenic	.	.	Alu	0.142857
2	201066277	A->G	-	ENSG00000155744	FAM126B	protein_coding	Intergenic	.	.	Alu	0.153846
2	201066316	A->G	-	ENSG00000155744	FAM126B	protein_coding	Intergenic	.	.	Alu	0.181818
2	201133751	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.2
2	201133778	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.125
2	201133810	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.133333
2	201134089	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.363636
1	202139316	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.15
1	202139743	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.266667
1	202139776	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.25
1	202139824	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.08
1	202139825	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.2
1	202139826	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.16
1	202139827	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.125
1	202139830	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.333333
1	202139920	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.0645161
1	202139923	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.242424
1	202139929	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.103448
2	202223354	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	1
2	202227018	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.52381
2	202227030	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	202227031	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.157895
2	202227083	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.157895
2	202227333	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.35
2	202227345	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.444444
2	202227346	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.117647
2	202227411	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.551724
2	202227412	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.392857
2	202288364	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
1	202537223	A->G	+	ENSG00000077157	PPP1R12B	protein_coding	Intergenic	.	.	Alu	0.2
1	202537239	A->G	+	ENSG00000077157	PPP1R12B	protein_coding	Intergenic	.	.	Alu	0.2
2	202741218	A->G	+	ENSG00000138439	FAM117B	protein_coding	Intergenic	.	.	Alu	0.142857
2	202741299	A->G	+	ENSG00000138439	FAM117B	protein_coding	Intergenic	.	.	Alu	0.307692
1	202753775	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.142857
1	202753798	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.2
1	202753808	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.210526
1	202768882	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.181818
2	202803212	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.3
2	202803254	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	1
2	202803281	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	1
1	202948852	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.307692
2	203298478	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203298502	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.222222
2	203298650	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203298651	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203300821	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203300831	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203300839	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.384615
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203303580	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203303584	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.12
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.407407
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	203303796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203303818	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.230769
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203304098	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203304099	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.8
1	203312660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	203851848	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.133333
1	203851926	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	204520729	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.2
1	205740114	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.4
1	205740135	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	205740140	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.45
1	205740163	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.214286
1	205740167	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.333333
1	205740173	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.117647
1	205740177	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.117647
1	205740277	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.2
1	205740278	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.2
1	205740280	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.285714
1	205740401	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.3
1	205744695	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.222222
1	205744709	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0857143
1	205744725	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.264706
1	205744729	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.347826
1	205744744	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.16
1	205744770	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.125
1	205744793	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.341463
1	205744805	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	205744814	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.136364
1	205744864	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	205744869	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.307692
1	205744874	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	205744904	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0588235
1	205744905	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0588235
1	205744927	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.241379
2	206068742	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.157895
2	206071030	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.125
2	206071054	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.230769
2	206071103	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.133333
2	206071123	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.125
2	206071126	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.137931
2	206071132	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0769231
2	206071154	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0740741
2	206071157	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0740741
2	206071166	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.107143
2	206071191	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0869565
1	206718375	A->G	+	ENSG00000162889	MAPKAPK2	protein_coding	Intergenic	.	.	Alu	0.105263
1	207788397	A->G	+	ENSG00000117335	CD46	protein_coding	Intergenic	.	.	Alu	0.363636
1	207788403	A->G	+	ENSG00000117335	CD46	protein_coding	Intergenic	.	.	Alu	0.142857
1	211803891	A->G	-	ENSG00000123684	LPGAT1	protein_coding	Intergenic	.	.	Alu	0.166667
1	211825270	A->G	-	ENSG00000123684	LPGAT1	protein_coding	Intergenic	.	.	Alu	0.181818
1	212054574	A->G	+	ENSG00000143476	DTL	protein_coding	Intergenic	.	.	Alu	0.4
1	212054618	A->G	+	ENSG00000143476	DTL	protein_coding	Intergenic	.	.	Alu	0.166667
1	212054632	A->G	+	ENSG00000143476	DTL	protein_coding	Intergenic	.	.	Alu	0.111111
1	212054716	A->G	+	ENSG00000143476	DTL	protein_coding	Intergenic	.	.	Alu	0.166667
1	213179295	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.307692
1	213179300	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.1
1	213179304	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.210526
1	213179336	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.235294
1	213179372	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.333333
2	216141934	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.111111
2	216141947	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.105263
2	216141957	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.277778
2	222565977	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	222566003	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	222566030	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	222638489	A->G	+	ENSG00000154305	MIA3	protein_coding	Intergenic	.	.	Alu	0.4
1	223842039	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0857143
1	224137412	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.136364
1	224137416	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.2
2	224516414	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	224516449	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.09375
2	224516455	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.264706
2	224516481	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224516557	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.1875
2	224516566	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.117647
1	225869791	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.5
1	225869795	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.363636
1	225869827	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.642857
1	225869858	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.2
1	225869864	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.272727
1	225869866	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.416667
1	225869867	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.333333
1	225869907	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.166667
1	225869927	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.923077
1	225869933	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.416667
1	226169605	A->G	-	ENSG00000182827	ACBD3	protein_coding	Intergenic	.	.	Alu	0.3
1	226169644	A->G	-	ENSG00000182827	ACBD3	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539187	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539188	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.3
2	227539209	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539234	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.277778
2	227539296	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.157895
2	227539541	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.478261
2	227539610	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.461538
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.666667
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.6875
2	227539690	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.117647
2	227539691	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.235294
2	227539708	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.133333
2	227539720	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.153846
2	227539891	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.285714
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.571429
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.928571
2	229884385	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	1
2	229884401	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.272727
2	229884456	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.5
2	230748572	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.2
2	230748635	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.142857
2	230748685	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.1
2	230748691	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.1
2	230748716	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.1
2	230748727	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.166667
2	230748739	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.266667
2	230753616	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.727273
2	230753636	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.4
2	230769769	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.181818
2	230769883	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.125
2	230769941	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.142857
2	232133940	A->G	+	ENSG00000144535	DIS3L2	protein_coding	Intergenic	.	.	Alu	0.2
2	232726155	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.166667
2	232726186	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.416667
2	232726190	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.166667
2	232726204	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.2
2	232726216	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.25
2	232726297	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.181818
2	232726314	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.181818
2	233085312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233131606	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.272727
2	233136352	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.4
2	233138114	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.307692
2	233138164	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.25
2	233138166	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.47619
2	233138172	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
2	233138173	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233138190	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1
2	233138229	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.421053
2	233138230	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.315789
2	233138235	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233155483	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.8
2	233159512	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0408163
2	233159538	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.16
2	233159540	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.381818
2	233159542	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.134615
2	233159543	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0408163
2	233159544	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.12766
2	233159545	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0638298
2	233159547	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.456522
2	233159563	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.268293
2	233159573	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.224138
2	233159615	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.162791
2	233159622	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.23913
2	233159628	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.225
2	233159635	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.347826
2	233159643	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.75
2	233159649	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.05
2	233173008	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.133333
2	233173023	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.357143
2	233174688	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1
2	233174733	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.105263
2	233174998	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233175013	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
2	233175017	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.235294
2	233175098	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.166667
2	233175812	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233175822	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233175904	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233205130	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.102041
2	233205135	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.16
2	233205140	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0357143
2	233205146	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.142857
2	233205161	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0384615
2	233205180	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.275862
2	233205183	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.09375
2	233205184	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.125
2	233205188	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0571429
2	233205191	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0512821
2	233205198	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0625
2	233205571	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0714286
2	233213266	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.125
2	233213292	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.105263
2	233213333	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.166667
2	233213369	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.130435
2	233213370	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	233213372	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	233213399	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.142857
2	233213400	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.173913
2	233213440	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.230769
2	233230505	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.4
2	233230527	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.166667
2	233230549	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.1875
2	233235553	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.6
2	233235591	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.5
2	233235708	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.153846
2	233241712	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.2
2	233241713	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.181818
2	233241726	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.2
2	233362504	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.363636
2	233362531	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.25
2	233362580	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.272727
1	235135425	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.115385
1	235145332	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.384615
1	235145349	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.153846
1	235145883	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.588235
1	235145888	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.176471
1	235145906	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.137931
1	235145934	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235146126	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.133333
1	235169309	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235219160	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235236023	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0689655
1	235239050	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.555556
1	235239075	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235239079	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235294402	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0714286
1	235294410	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235300916	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.129032
1	235300943	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0833333
1	235301105	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.125
1	235301128	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235301132	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.727273
1	235301282	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.116279
1	235301286	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.173913
1	235301293	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.333333
1	235301294	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0612245
1	235301320	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.172414
1	235301321	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.135593
1	235301335	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0714286
1	235301365	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.522727
1	235301371	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235301372	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235301391	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0338983
1	235301414	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.333333
1	235301423	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25641
1	235301430	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0444444
1	235301439	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0425532
1	235301444	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0392157
1	235301482	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.03125
1	235301503	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.617021
1	235301521	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0512821
1	235301598	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.5
1	235301622	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0576923
1	235301665	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0689655
1	235301670	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.047619
1	235301682	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0517241
1	235301714	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235301777	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0512821
1	235301812	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0465116
1	235301826	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0392157
1	235301852	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0681818
1	235301866	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	235301965	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235303020	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.047619
1	235303035	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0606061
1	235303195	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.272727
1	235303196	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235307886	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.075
1	235307941	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.205882
1	235307968	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.27451
1	235308320	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0769231
1	235308338	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235308357	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.263158
1	235308379	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235318219	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235318234	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0588235
1	235318261	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.121212
1	235318273	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.103448
1	235318274	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.3125
1	235318291	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235318300	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.602941
1	235318313	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.134831
1	235318314	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235318340	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.168831
1	235318343	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0493827
1	235318344	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0235294
1	235318368	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0434783
1	235318392	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.297872
1	235318393	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0416667
1	235318427	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0344828
1	235318759	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.3
1	235318772	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25
1	235318773	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.583333
1	235323166	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.111111
1	235323202	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.157895
1	235323243	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	236264287	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.2
1	236264305	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.181818
1	236264312	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.4
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.8
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.636364
2	237707429	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	238184620	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.08
2	241322486	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
2	241322528	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.142857
2	241326833	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0416667
2	241326834	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0612245
2	241326842	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0638298
2	241326890	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0909091
2	241326924	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0625
2	241326927	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.172414
2	241326931	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0606061
2	241326935	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0588235
2	241326992	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.236842
2	241326993	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.097561
2	241327852	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.125
2	241327906	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0714286
2	241327910	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.08
2	241327932	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0666667
2	241327938	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0571429
2	241327959	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0769231
2	241327992	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.210526
2	241331059	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.230769
2	241331081	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.416667
2	241331161	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.333333
1	243246343	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.115385
1	243246376	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.157895
1	243246411	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.1
1	243246513	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.0909091
1	243312595	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.6
1	243760230	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	243798188	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.214286
1	243798198	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.2
1	243798374	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.3
1	244432873	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	1
1	244441159	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.3
1	246084337	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.117647
1	246185590	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.181818
1	246273287	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.133333
1	246288185	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.2
1	246288198	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.923077
1	246288211	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.125
1	246288234	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.727273
1	246288277	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.5
1	246288278	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.333333
1	246288281	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.384615
1	246288292	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.266667
1	246288293	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.142857
1	246576073	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.181818
1	246663282	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.166667
1	246892417	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.142857
1	246911622	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	246911630	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.307692
1	246911685	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.4
1	246911996	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.25
1	247306258	A->G	-	ENSG00000162714	ZNF496	protein_coding	Intergenic	.	.	Alu	0.272727
1	247306288	A->G	-	ENSG00000162714	ZNF496	protein_coding	Intergenic	.	.	Alu	0.2
16	738421	A->G	-	ENSG00000103245	NARFL	protein_coding	Intron	.	.	Alu	0.181818
17	1585271	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.45
16	2080612	A->G	-	ENSG00000103197	TSC2	protein_coding	Intron	.	.	Alu	0.454545
16	2098853	A->G	-	ENSG00000008710	PKD1	protein_coding	Intron	.	.	Alu	0.5
16	2684657	A->G	+	ENSG00000279901	AC092117.2	TEC	Intron	.	.	Alu	0.166667
16	2684685	A->G	+	ENSG00000279901	AC092117.2	TEC	Intron	.	.	Alu	0.2
19	4450504	A->G	+	ENSG00000280239	AC011498.7	TEC	Intron	.	.	Alu	0.214286
19	4450595	A->G	+	ENSG00000280239	AC011498.7	TEC	Intron	.	.	Alu	0.117647
19	4450601	A->G	+	ENSG00000280239	AC011498.7	TEC	Intron	.	.	Alu	0.105263
19	7973369	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intron	.	.	Alu	0.2
19	8492021	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intron	.	.	Alu	0.125
16	8857655	A->G	-	ENSG00000153048	CARHSP1	protein_coding	Intron	.	.	Alu	0.181818
3	9827922	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.4
3	9827965	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.2
3	9827966	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.466667
3	9828021	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.714286
3	9828062	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.285714
3	9987139	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0526316
19	11040736	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intron	.	.	Alu	0.181818
19	11850780	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.2
19	11850848	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.272727
19	11850910	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.230769
19	11850997	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.2
19	12003400	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.266667
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.26087
19	12003436	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.227273
19	12003517	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.111111
19	12660923	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.142857
19	12660936	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.133333
19	12660937	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.125
19	12660938	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.25
18	12862256	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intron	.	.	Alu	0.166667
18	12862296	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intron	.	.	Alu	0.3
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.227273
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.461538
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.28
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.434783
9	15505024	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.176471
9	15505103	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.125
9	15505118	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.25
9	15505133	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.176471
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.363636
17	15530867	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intron	.	.	Alu	0.416667
17	15530907	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intron	.	.	Alu	0.230769
17	15530939	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intron	.	.	Alu	0.333333
17	15530944	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intron	.	.	Alu	0.2
19	16565788	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intron	.	.	Alu	0.7
19	16565789	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intron	.	.	Alu	0.9
19	16610489	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.6
19	16610517	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.142857
19	16610520	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.130435
19	16610529	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.526316
19	16610530	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.157895
19	16610585	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.142857
19	16640087	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.363636
19	16640114	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.25
22	16653525	A->G	+	ENSG00000100181	TPTEP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
19	17099190	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intron	.	.	Alu	0.2
19	17099207	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intron	.	.	Alu	0.117647
19	17099216	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intron	.	.	Alu	0.173913
8	19824267	A->G	+	ENSG00000104613	INTS10	protein_coding	Intron	.	.	Alu	0.153846
8	19824272	A->G	+	ENSG00000104613	INTS10	protein_coding	Intron	.	.	Alu	0.307692
14	20449822	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.3
14	20450149	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.235294
14	20450182	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.235294
19	21452101	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.333333
19	21452160	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.25
19	21452161	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.210526
19	21452173	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.142857
19	21452209	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.153846
19	21452247	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.176471
14	21496090	A->G	+	ENSG00000092203	TOX4	protein_coding	Intron	.	.	Alu	0.117647
16	22328906	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.2
16	22328911	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.692308
16	22328991	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.25
16	22419441	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
16	22419470	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
16	22419652	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
15	24983529	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24983545	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.3
15	24983585	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.3
15	24983610	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.272727
15	24983613	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.363636
15	24983646	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.6
15	24983667	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.6
15	24983668	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.818182
15	24983770	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.157895
22	26476393	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.142857
22	26476441	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.692308
22	26476446	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.5
22	26476479	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.105263
22	26476518	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.166667
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0887097
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0493827
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0816327
10	28523053	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.125
10	28523105	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0555556
17	28721197	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.105263
17	28722416	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0833333
17	28722429	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.25
17	28722439	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0952381
17	28722449	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.1
1	29173234	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0930233
1	29173235	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.205128
1	29173252	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.137931
1	29173276	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.163265
1	29173302	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.176471
1	29173349	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.181818
12	29393186	A->G	+	ENSG00000257599	OVCH1-AS1	antisense	Intron	.	.	Alu	1
17	30772387	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.384615
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.1875
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.25
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.166667
16	31183140	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.25
16	31183189	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.142857
1	31263451	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intron	.	.	Alu	0.2
1	32781978	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.684211
19	36062392	A->G	+	ENSG00000075702	WDR62	protein_coding	Intron	.	.	Alu	0.153846
19	36062440	A->G	+	ENSG00000075702	WDR62	protein_coding	Intron	.	.	Alu	0.272727
19	36062488	A->G	+	ENSG00000075702	WDR62	protein_coding	Intron	.	.	Alu	0.4
19	36062490	A->G	+	ENSG00000075702	WDR62	protein_coding	Intron	.	.	Alu	0.2
1	36477355	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intron	.	.	Alu	0.25
22	37627040	A->G	+	ENSG00000100083	GGA1	protein_coding	Intron	.	.	Alu	0.2
22	37627046	A->G	+	ENSG00000100083	GGA1	protein_coding	Intron	.	.	Alu	0.363636
19	38844801	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.222222
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.139535
19	38844902	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0833333
19	38844917	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.588235
5	38969801	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.25
5	38969807	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.230769
5	38969869	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.235294
3	39408965	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.235294
19	39491701	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.3
7	40048974	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.181818
7	40049020	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.125
7	40049026	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.166667
7	40049028	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.25
7	40049033	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.166667
7	40049110	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.4
15	41298774	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0689655
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0714286
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.217391
15	41298816	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.08
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.227273
15	41299199	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.176471
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.333333
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.4
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.428571
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.176471
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.153846
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.130435
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.142857
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.142857
15	41302422	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.105263
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.111111
15	41302478	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.153846
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.4
15	41305471	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
17	41984442	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.133333
17	41984930	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.0952381
17	42014305	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.117647
17	42014654	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.129032
17	42014657	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.107143
17	42014703	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.266667
17	42014721	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.125
17	42014725	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.1875
17	42014753	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.166667
17	42014763	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.2
17	42014838	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.227273
12	42355604	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intron	.	.	Alu	0.0540541
8	43070107	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intron	.	.	Alu	0.230769
17	43226191	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intron	.	.	Alu	0.2
11	44606373	A->G	+	ENSG00000085117	CD82	protein_coding	Intron	.	.	Alu	0.142857
1	44626828	A->G	+	ENSG00000187147	RNF220	protein_coding	Intron	.	.	Alu	0.1875
17	45218327	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.117647
17	45218329	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.133333
17	45218354	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.263158
17	45218373	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.105263
17	45218390	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.217391
17	45218399	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.611111
17	45218464	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.333333
17	45218466	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.153846
17	45218486	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.2
17	45218503	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.25
17	45218533	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.142857
17	45218534	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.214286
17	45218536	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.5
17	45218542	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.133333
17	45218634	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.166667
17	45218681	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.181818
17	45218708	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.5
17	46049429	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.4
17	46049439	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.461538
17	46049440	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.230769
17	47170228	A->G	-	ENSG00000004897	CDC27	protein_coding	Intron	.	.	Alu	0.5
17	47170270	A->G	-	ENSG00000004897	CDC27	protein_coding	Intron	.	.	Alu	0.2
11	47513645	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intron	.	.	Alu	0.181818
17	47596073	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intron	.	.	Alu	0.0689655
14	49646593	A->G	-	ENSG00000100479	POLE2	protein_coding	Intron	.	.	Alu	0.214286
14	49820116	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.318182
14	49820119	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.0869565
14	49820120	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.173913
14	49820131	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.111111
14	49820152	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.25
14	49820153	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.176471
14	49820156	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.111111
14	49820185	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.235294
14	49820192	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.736842
14	49820217	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.136364
3	49962979	A->G	+	ENSG00000004534	RBM6	protein_coding	Intron	.	.	Alu	0.652174
3	49962989	A->G	+	ENSG00000004534	RBM6	protein_coding	Intron	.	.	Alu	0.105263
15	50358041	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.153846
15	50358158	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.153846
15	50358184	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.461538
15	50358211	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1875
15	50358246	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.153846
15	50360599	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50360622	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.461538
15	50360623	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50360641	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50360646	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.8
15	50360710	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50360752	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50360754	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
15	50360816	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.6
15	50360821	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50360992	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0869565
15	50360993	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.272727
15	50360995	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50361015	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.928571
15	50361024	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50361055	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50361159	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.230769
15	50361163	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.666667
15	50361178	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50366794	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.4
15	50366807	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.363636
15	50366822	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.7
15	50366908	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.272727
15	50367238	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.625
15	50367248	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.533333
15	50367252	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.461538
15	50367426	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.208333
15	50367442	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0740741
15	50368094	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3125
15	50368100	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50368112	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50368114	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.615385
15	50368196	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50368239	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.12
15	50368336	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50368363	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
15	50368368	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368383	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368400	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.416667
15	50368403	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.416667
15	50368428	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50368452	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50368486	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.272727
15	50368534	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3125
15	50369828	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3125
15	50369966	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50369967	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.307692
15	50369981	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.235294
15	50370010	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50370038	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.380952
15	50370039	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0952381
15	50370044	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1
17	51031052	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intron	.	.	Alu	0.181818
17	51250033	A->G	-	ENSG00000264895	AC006141.1	sense_intronic	Intron	.	.	Alu	0.142857
3	52414754	A->G	+	ENSG00000010318	PHF7	protein_coding	Intron	.	.	Alu	0.3
14	52721545	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.166667
14	52721546	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.384615
14	52721615	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.06
14	52721822	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.5
19	52723449	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intron	.	.	Alu	0.2
19	52723450	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intron	.	.	Alu	0.2
2	53870522	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.133333
2	53870534	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.111111
2	53870571	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.129032
2	53870581	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.114286
2	53870635	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0666667
2	53870662	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0714286
14	55285290	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.25
14	55285291	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.416667
4	55412123	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.133333
4	55412131	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.2
4	55412139	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.130435
4	55412140	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.4
18	55551040	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.142857
18	55551081	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.129032
18	55551082	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.225806
18	55551132	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.2
18	55551138	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.222222
18	55551172	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.15
18	55551187	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.25
18	55551201	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.25
12	56312472	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.666667
12	56312578	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.0740741
12	56312844	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.137931
19	56379401	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
19	56379406	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
17	62004993	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.333333
17	62004996	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.125
17	62005011	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.166667
17	62005012	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.461538
11	62887892	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intron	.	.	Alu	0.307692
11	62887893	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intron	.	.	Alu	0.307692
17	63725745	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intron	.	.	Alu	0.214286
17	63725766	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intron	.	.	Alu	0.181818
17	63725849	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intron	.	.	Alu	0.166667
17	63725850	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intron	.	.	Alu	0.153846
17	63725851	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intron	.	.	Alu	0.166667
17	64782783	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.210526
17	64782791	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
17	64782793	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
17	64782811	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.809524
17	64782849	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.769231
17	64782853	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.818182
17	64782862	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
17	64782863	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
11	65439427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0338983
11	65439433	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0298507
11	65440001	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0540541
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0625
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.277778
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.125
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.111111
11	65441441	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0833333
17	67355342	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.0273973
17	67355343	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.123288
17	67355371	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.170213
17	67956570	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.352941
17	67956592	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.35
17	67956708	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.272727
17	67956849	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.2
17	67956857	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.272727
12	71774245	A->G	+	ENSG00000080371	RAB21	protein_coding	Intron	.	.	Alu	0.107143
12	71774269	A->G	+	ENSG00000080371	RAB21	protein_coding	Intron	.	.	Alu	0.0714286
12	71774271	A->G	+	ENSG00000080371	RAB21	protein_coding	Intron	.	.	Alu	0.0769231
10	73779403	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.230769
X	74278476	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.272727
7	74883198	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
17	75208324	A->G	+	ENSG00000125450	NUP85	protein_coding	Intron	.	.	Alu	0.416667
17	75208334	A->G	+	ENSG00000125450	NUP85	protein_coding	Intron	.	.	Alu	0.166667
16	75394807	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intron	.	.	Alu	0.266667
4	77064785	A->G	-	ENSG00000118816	CCNI	protein_coding	Intron	.	.	Alu	0.181818
18	79086329	A->G	+	ENSG00000279416	AC099689.1	TEC	Intron	.	.	Alu	0.181818
17	81847789	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.181818
17	81847816	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.222222
17	81847842	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.115385
17	81855966	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.08
16	89516852	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.3125
1	93337903	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0769231
1	93337969	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0416667
1	93337979	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.25641
1	93337985	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.142857
1	93338001	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
1	93338005	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0512821
1	93338054	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0930233
1	93338064	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.125
1	93338065	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.190476
12	93542773	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.333333
2	96281368	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intron	.	.	Alu	0.181818
8	98043194	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.230769
8	98043199	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0638298
8	98043203	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.22
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.62963
8	98043223	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.075
8	98043224	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.114754
8	98043255	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0240964
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.476744
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.75
8	98043294	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0458015
8	98043303	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0245902
8	98043319	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0900901
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0714286
X	101393003	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.263158
4	102810541	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0454545
4	102810582	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.06
4	102810583	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.2
14	103682429	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0967742
14	103682430	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.225806
14	103682478	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0645161
14	103682509	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0666667
14	103682520	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0714286
14	103682551	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.391304
14	103682554	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.08
14	103682586	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.190476
14	103682591	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0909091
14	103682604	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.263158
14	103682606	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.277778
4	108623146	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.181818
4	108623264	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.153846
1	110379873	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intron	.	.	Alu	0.272727
1	110379881	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intron	.	.	Alu	0.25
1	110379882	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intron	.	.	Alu	0.166667
10	112449646	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.545455
11	117159774	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.214286
11	117159796	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.666667
11	117212821	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.2
12	121320678	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.307692
12	121320679	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.166667
12	121320767	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.166667
12	121320875	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.384615
12	121320876	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.769231
12	122875156	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.105263
12	122875157	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.0833333
12	122878789	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.4
12	122878790	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.181818
12	122878929	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.153846
12	122883618	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.214286
12	122883624	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.318182
12	122883745	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.153846
12	122883751	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.461538
12	122883774	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.153846
7	128527100	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
9	129504233	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.153846
9	129504303	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.153846
9	129504304	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.357143
12	131897764	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.0714286
12	131897818	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.26087
12	131897819	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.0952381
12	131897824	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.130435
12	131897833	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.1
12	131897859	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.190476
5	132926759	A->G	-	ENSG00000072364	AFF4	protein_coding	Intron	.	.	Alu	0.130435
5	139016889	A->G	-	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.157895
5	140535795	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.0740741
5	140535829	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.103448
4	151012973	A->G	-	ENSG00000198589	LRBA	protein_coding	Intron	.	.	Alu	0.230769
1	155670743	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.185185
1	155670747	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.0869565
1	155670807	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.333333
1	155670813	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.214286
1	155670839	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.153846
1	155670842	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.25
1	155670849	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.210526
1	155670905	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.380952
1	155670930	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.409091
1	155670942	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.217391
1	155670943	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.125
5	157384820	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intron	.	.	Alu	0.3
5	157384829	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intron	.	.	Alu	0.153846
4	158679938	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.117647
4	158680006	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.1
1	185292590	A->G	-	ENSG00000279838	AL356273.3	TEC	Intron	.	.	Alu	0.2
2	191076094	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.2
3	195700654	A->G	+	ENSG00000242086	MUC20-OT1	lincRNA	Intron	.	.	Alu	0.153846
3	196914504	A->G	+	ENSG00000230732	AC016949.1	sense_intronic	Intron	.	.	Alu	0.0833333
3	196914506	A->G	+	ENSG00000230732	AC016949.1	sense_intronic	Intron	.	.	Alu	0.0833333
2	199942205	A->G	-	ENSG00000178074	C2orf69	protein_coding	Intron	.	.	Alu	0.3
1	201519791	A->G	+	ENSG00000223396	RPS10P7	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
1	211358652	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.153846
1	224269910	A->G	-	ENSG00000143748	NVL	protein_coding	Intron	.	.	Alu	0.2
2	233141298	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.891892
2	233141311	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.486486
2	233141312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.789474
2	233141361	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.047619
2	233141381	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0535714
2	233141383	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0363636
2	233141415	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0384615
2	233141416	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0769231
2	233141417	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.111111
2	233141420	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.244444
2	233141446	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.117647
2	233141447	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.151515
2	233141463	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0588235
2	233141469	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0740741
2	233141487	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.258065
2	233141488	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.233333
2	233141517	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.097561
2	233141527	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.204545
2	233141532	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0666667
2	233205224	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.21875
2	233205247	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.322581
2	233205277	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.206897
2	233205410	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.75
2	233205461	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.1875
1	235180333	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intron	.	.	Alu	0.363636
1	235180424	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intron	.	.	Alu	0.466667
1	235180440	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intron	.	.	Alu	0.363636
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	863409	A->G	+	ENSG00000197766	CFD	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	2417192	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	2417201	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	2417215	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	2417241	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	2417277	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.16
17	2417334	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.125
17	2417351	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	2417357	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.714286
7	2434482	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
7	2434486	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	2434556	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	2434645	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	2434676	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	2434677	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.368421
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.315789
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.714286
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	1
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	1
4	2938682	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	2938686	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	2938687	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.190476
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.190476
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.846154
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	3545047	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	3545056	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	3824811	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	3824812	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3824864	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.26087
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.173913
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	1
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.185185
20	3870586	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.185185
20	3870590	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3870629	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	3870960	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3870980	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3870985	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.6
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.384615
20	3871024	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3875295	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3875305	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	4653604	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	4653608	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.545455
9	4710425	A->G	-	ENSG00000147853	AK3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4838784	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.0217391
7	5389522	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.5
7	5389523	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	5389583	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.857143
7	5389587	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	1
7	5389592	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	1
7	5389673	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.5625
7	5389674	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.5625
7	5389681	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.461538
7	5389692	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.375
7	5389735	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.631579
7	5389736	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.85
19	6379671	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	7095319	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8686396	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	9268017	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	9268061	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.3
1	9268141	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	9268154	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.131579
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.255814
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.451613
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.35
1	9271117	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	9271168	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	9271195	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.147059
1	9271196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	9562232	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9562237	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	9648511	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	9648529	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	10151919	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	10151940	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	10151971	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0789474
3	10151981	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	10152049	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10152064	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	10152182	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.2
3	10152192	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	10152197	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	10152207	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0727273
3	10152219	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	10457939	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10457941	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	10458644	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	10458677	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10458740	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	10458774	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10458788	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10458810	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10458816	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	10458985	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	10460321	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.466667
1	10460326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460475	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	10460517	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10460626	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.375
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.238095
1	10460635	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	10460662	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10460678	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	10460698	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	10460708	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	10460710	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	10460757	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10460762	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	10460800	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.08
1	10461113	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	10461115	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	10461203	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	10673089	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	11145950	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	11145991	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.08
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.1
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.233333
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.733333
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	11834994	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.416667
16	11835293	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	11837622	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0337079
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.217391
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.391304
8	11842726	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	11842733	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.275862
8	11842742	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.151515
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	11842774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.115385
8	11842801	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	11842812	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0967742
8	11842815	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	11842854	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.193548
8	11842864	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.193548
8	11842879	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	11842909	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	11842910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	11843017	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843046	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.3
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.4
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.5625
8	11843910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.3
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.538462
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11843976	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.25
8	11843981	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.909091
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	12121033	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.136364
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	12121127	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.2
10	14907959	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0740741
10	14907978	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	16550675	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	16550680	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	16551827	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	16551866	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	16551919	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	16551968	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16641424	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	16641436	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.35
19	16641437	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.3
4	17801244	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	17803162	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	17803163	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0833333
4	17803176	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17803229	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.318182
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.583333
19	18992230	A->G	-	ENSG00000064607	SUGP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	18992231	A->G	-	ENSG00000064607	SUGP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	18992253	A->G	-	ENSG00000064607	SUGP2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	19259013	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.5
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	20651958	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0290698
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.125
1	20652030	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0319149
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0300752
19	21119296	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.3
19	21187618	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	21640646	A->G	+	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	21640647	A->G	+	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21806237	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	21806266	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	21806273	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	21806299	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.08
19	21806358	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.208333
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.16
19	21806437	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	21806438	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	21806440	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	24077133	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0222222
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.048
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0534351
X	24077203	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0294118
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0970874
X	24077210	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0206186
X	24077234	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.032967
X	24077235	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0210526
X	24077249	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0322581
22	24572610	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	24572611	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
22	24572682	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	24839991	A->G	-	ENSG00000111913	RIPOR2	protein_coding	three_prime_utr	.	.	Alu	0.1
6	25986272	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	25986439	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	25986489	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	28497875	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	28965612	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	28965643	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.108108
16	29665119	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0930233
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	29665330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0263158
16	29666274	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0298507
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.657895
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29667598	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29667599	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.26087
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	29667633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.184211
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.225
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.145833
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0816327
16	29667696	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	29667704	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.18
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29667791	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	29668486	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.344828
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.28
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.32
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.258065
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.258065
16	29668724	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29668876	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29668909	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.028169
16	29668913	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0410959
16	29668918	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	29668938	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.533333
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.295455
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.23913
16	29668991	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113208
16	29668998	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0784314
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.327273
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113208
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.446429
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.28125
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0923077
16	29669084	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.06
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.109375
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.183333
16	29669128	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	29669306	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5625
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29669327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.681818
16	29669386	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.194444
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.490566
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.945455
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.316667
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.880597
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29669630	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.038961
16	29669633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.478261
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.342105
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.605263
16	29669684	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0547945
16	29669690	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29669694	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0253165
16	29669703	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0232558
16	29669722	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0204082
16	29669726	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0215054
16	29669729	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29669755	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.479167
16	29669756	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.326531
16	29669765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29669782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29669817	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	29669821	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669828	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	29669831	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29669859	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0943396
16	29669865	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0930233
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.162791
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0396825
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0564516
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29669972	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0247934
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0642202
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.571429
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.127451
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119266
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0603448
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.309091
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0733945
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29670086	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0396825
16	29670090	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0510949
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.036036
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0550459
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0642857
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.299065
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.373832
16	29670143	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0884956
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.150442
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0413223
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.134921
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.233083
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29670247	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0214286
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0862069
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0230769
16	29670311	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0336134
16	29670312	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0409836
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.141509
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0546875
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0381679
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0676692
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29670330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0305344
16	29670331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0218978
16	29670338	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0614035
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.155556
16	29670374	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037594
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.22963
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0510949
16	29670398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0218978
16	29670401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0220588
16	29670410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0215054
16	29670417	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.027027
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0925926
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0879121
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.161765
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0544218
16	29670476	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0202703
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0460526
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.5
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.25
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.5
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0810811
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0833333
18	32068964	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0666667
18	32068967	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0689655
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.346154
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.296296
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.214286
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.232558
18	32069040	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.116279
18	32069045	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0666667
18	32069049	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.05
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.135135
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0606061
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	32069083	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0689655
18	32069109	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0909091
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.09375
18	32069116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0857143
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.26087
18	32069158	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.130435
18	32069183	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32175959	A->G	+	ENSG00000250135	AL049795.2	sense_intronic	three_prime_utr	.	.	Alu	0.0408163
1	32175963	A->G	+	ENSG00000250135	AL049795.2	sense_intronic	three_prime_utr	.	.	Alu	0.0384615
1	32231290	A->G	+	ENSG00000084623	EIF3I	protein_coding	three_prime_utr	.	.	Alu	0.0227273
1	32231443	A->G	+	ENSG00000084623	EIF3I	protein_coding	three_prime_utr	.	.	Alu	0.0201342
2	32307656	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	32307672	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	32307673	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	32307741	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	32307809	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32307818	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	32307876	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.1
2	32307880	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32312272	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.1
2	32312322	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.28
2	32312326	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	32312327	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	32312328	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.5
2	32312341	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	32312367	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.464286
2	32312377	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.12
13	32399052	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	32399063	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.4
13	32510584	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	32683020	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.764706
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	32683247	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33005370	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.107143
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	1
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	1
6	33005410	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.1
6	33005440	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.842105
6	33005448	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	33005742	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	33005769	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.125
6	33005780	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.235294
6	33005797	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	33005807	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.533333
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.106383
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.466667
15	34231662	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.375
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.533333
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	35249532	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35601198	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	35601199	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	35601204	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.451613
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602208	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.757576
1	35602232	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.605263
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.766667
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.35
1	35602565	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.52381
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.45
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	35602642	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.526316
18	36179353	A->G	+	ENSG00000134759	ELP2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37103288	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37103292	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	37103293	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37103333	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	37103334	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37103360	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.421053
2	37103363	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37103364	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37103469	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37104484	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	37104499	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.15
2	37104568	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	37104593	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.16
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.26087
2	37202435	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37204433	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37204536	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37204537	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.277778
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.1
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0689655
9	37503457	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.107143
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.137931
4	37622937	A->G	-	ENSG00000154274	C4orf19	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	37622961	A->G	-	ENSG00000154274	C4orf19	protein_coding	three_prime_utr	.	.	Alu	0.2
4	37622972	A->G	-	ENSG00000154274	C4orf19	protein_coding	three_prime_utr	.	.	Alu	0.2
7	38724758	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.9
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.3
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.3
19	38868085	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.2
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.2
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	39018748	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0454545
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.043956
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.313253
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0449438
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.439252
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0326087
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.125
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.789474
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.55
22	39020018	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.411765
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.135135
17	39257148	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.4
19	39492231	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	39492611	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	39492612	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.384615
17	40283362	A->G	+	ENSG00000171475	WIPF2	protein_coding	three_prime_utr	.	.	Alu	0.8
3	40466111	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	40466112	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	40466116	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	40466136	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	40466407	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	40466425	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	40466426	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	40466431	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	40466434	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	40466452	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.217391
3	40466484	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	40466493	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	41542432	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	41871518	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.482759
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.375
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.40625
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.21875
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.327273
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	1
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.241379
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	42207346	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.5
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.3
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.277778
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.904762
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.115385
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.527778
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42889288	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.37931
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.12
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.148148
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.185185
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.170732
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.461538
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.16
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	1
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	1
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.205128
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.472222
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.178571
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43020945	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43020952	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.107143
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43021008	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.185185
8	43021023	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.318182
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021383	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43023059	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	43023091	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	43023095	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43174132	A->G	+	ENSG00000165102	HGSNAT	protein_coding	three_prime_utr	.	.	Alu	0.2
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.384615
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.923077
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.4
7	44802258	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.5
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	44834927	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0952381
7	44834986	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	44834996	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	44835001	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	44835056	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.212121
7	44835063	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.310345
7	44835065	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	45954852	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.0810811
12	45954853	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	45955209	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	46364478	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	46364541	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	46364561	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	46364622	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0263158
8	47977112	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.043956
8	47977113	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.045977
8	47977119	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0224719
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.311475
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.116667
8	47977687	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	48353439	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48354336	A->G	-	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.3
X	48577934	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0243902
X	48577960	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0218341
3	48748204	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	48748210	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.5
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	48749619	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	48749700	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	48749752	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	48750239	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	48750281	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50325958	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50326045	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326055	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50326069	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1
14	50326070	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.263158
14	50326083	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	50326119	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	50326136	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	50326145	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	50326179	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	50327126	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50327149	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.571429
14	50327214	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	50327228	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50327250	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.3
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.4
14	50327645	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.5
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.3
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.526316
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.277778
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.238095
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.35
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.264706
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.097561
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	50931639	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.461538
12	50931663	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.25
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	50931800	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	51913749	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	51913757	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.25
15	51913758	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51913774	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.266667
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.375
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	51913892	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.35
15	51913938	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.526316
15	51913957	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.466667
19	52032552	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52032592	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52825736	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	52825763	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.8
X	54560777	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.172414
X	54560785	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	54560786	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.607143
X	54560845	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	54560857	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	54560863	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	54560864	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	54560865	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.5
X	54560907	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	54560917	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	1
X	54560919	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.555556
X	54560920	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.722222
X	54560978	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0857143
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.72973
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.194444
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.102564
X	54561017	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0930233
X	54561029	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.08
X	54561032	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0847458
15	55203701	A->G	-	ENSG00000069974	RAB27A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	55960647	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	55960669	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	55960670	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.15
4	55960718	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	55960738	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	1
4	55960747	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	1
4	55960754	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.125
8	56067429	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.5
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.363636
4	56460020	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.703704
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.2
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.25
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	56460707	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0816327
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	1
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	1
4	56460764	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.1
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.5
4	56460856	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.114286
4	56460883	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.3
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0810811
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.186047
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	1
4	56460942	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	57251219	A->G	+	ENSG00000102931	ARL2BP	protein_coding	three_prime_utr	.	.	Alu	0.2
3	58318551	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.1
3	58318731	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	58318813	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.125
3	58318816	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.125
17	59203626	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.125
17	59203649	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.470588
17	59203694	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.25
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.545455
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	59203715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.454545
17	59203789	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	59204139	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	59204152	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.15625
17	59204275	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.05
17	59204585	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	60929956	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0810811
15	64142303	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.2
15	64142315	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.107143
15	64364763	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	64364824	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0576923
15	64364847	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	64364855	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0357143
15	64364948	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.115385
15	64364957	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	64364963	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	64365274	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	64365275	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.137931
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	1
7	66153875	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.6
7	66154326	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	66333542	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.823529
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.375
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.108108
11	68755482	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.25
11	68755548	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
11	68755577	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0442478
11	68755579	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.042735
11	68755586	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.025
11	68755587	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0247934
11	68755588	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0608696
11	68755604	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.180851
11	68755605	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.021978
11	68755606	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0531915
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.361446
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.113924
11	68755638	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0363636
11	68755659	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0208333
11	68755660	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.029703
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.5625
11	68756003	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.5
12	68767477	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	68768169	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	69210102	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0338983
5	69210140	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0535714
5	69210267	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.097561
16	69327197	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.4
16	69327305	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.466667
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	70372978	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	70373115	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.115385
10	72235332	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	73249026	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0465116
10	73249034	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0512821
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0408163
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.140625
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0877193
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.196429
10	73249155	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0701754
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.5
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.05
12	75496033	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	75496034	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.315789
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.764706
12	75496115	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.793103
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.241379
12	75496292	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	75496298	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.075
12	75496308	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
12	75496341	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.55
16	75599319	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	77023818	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.818182
11	77023819	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0819672
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.169492
X	77827514	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0508475
X	77827518	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0307692
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.163934
X	77827557	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	77827563	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0806452
X	77827619	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.162162
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.5
9	78275494	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	78275560	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	78275562	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	79603912	A->G	-	ENSG00000177425	PAWR	protein_coding	three_prime_utr	.	.	Alu	0.2
10	80522325	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	80522372	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	80627466	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0512821
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.1
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.097561
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.16
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.192308
5	80627513	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.473684
5	80627562	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.2
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.461538
5	80628087	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	83005400	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0291262
2	85319274	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0380952
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.038835
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0597015
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0618557
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0326087
2	85319449	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.3
2	85610702	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	85610721	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.5
1	89182517	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	89563592	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.368421
15	90083229	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	90083230	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.05
15	90083261	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
15	90083297	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0422535
15	90083360	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
15	90083408	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.102564
7	92090422	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	92090432	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.526316
7	92090537	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	92090543	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.4
7	92090579	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.352941
9	96891622	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.108108
9	96891645	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.0571429
5	96917743	A->G	+	ENSG00000164308	ERAP2	protein_coding	three_prime_utr	.	.	Alu	0.025641
5	96917759	A->G	+	ENSG00000164308	ERAP2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
5	96917825	A->G	+	ENSG00000164308	ERAP2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0612245
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.25
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.25
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.5625
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.125
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	99387225	A->G	-	ENSG00000168904	LRRC28	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	101070748	A->G	+	ENSG00000154237	LRRK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.277778
7	101091551	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	101091569	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.125
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.176471
7	101091574	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.666667
7	101091606	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.5
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.8125
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.35
7	101093710	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	101096121	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.1
3	101823980	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	102036976	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.266667
14	102037176	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.227273
14	102037222	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.192308
14	102037248	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
14	102037272	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0769231
14	102037303	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.125
14	102037326	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0833333
7	102448761	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.135135
7	102449434	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
7	102449758	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	102449860	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	102450004	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0985915
7	102450050	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
7	102451080	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.037037
7	102564664	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.25
10	102863133	A->G	+	ENSG00000166275	BORCS7	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	106325771	A->G	+	ENSG00000166046	TCP11L2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	106325776	A->G	+	ENSG00000166046	TCP11L2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	111468755	A->G	-	ENSG00000204842	ATXN2	protein_coding	three_prime_utr	.	.	Alu	0.3
9	112685199	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.636364
X	120437941	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.08
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	123411655	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.3
12	123620390	A->G	+	ENSG00000111364	DDX55	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.388889
12	123661824	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	123661874	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	123662121	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	123662123	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123910855	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.6875
X	123912514	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	125029466	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	125656230	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	125676034	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126626330	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126626483	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.125
4	128036902	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	128036931	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.3
4	128037165	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.6
4	128037228	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.85
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.725
2	128192941	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	128192968	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	1
2	128192974	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	1
2	128193452	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.615385
2	128193465	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.72973
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.28125
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.515152
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.740741
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.12
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131201104	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131201274	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201453	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131201461	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.6
5	132482788	A->G	-	ENSG00000125347	IRF1	protein_coding	three_prime_utr	.	.	Alu	0.0277778
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.4
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.15
12	132722417	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.1
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.322581
5	134402234	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.037037
7	135384291	A->G	-	ENSG00000080802	CNOT4	protein_coding	three_prime_utr	.	.	Alu	1
3	141947445	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	141947450	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.1
3	141947482	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	141947507	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	1
3	141947543	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	141947553	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	141947579	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.107143
3	141947583	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	141947584	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.137931
3	141947585	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	141947588	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.375
3	141949845	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	141949870	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.125
3	141949872	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.36
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.458333
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141949946	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	141949972	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	141949975	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	141949978	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141949981	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.08
3	141949986	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.26087
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.478261
3	141950002	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.6
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.411765
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.269231
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.296296
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.78125
1	145745225	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.2
5	149493167	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	149493168	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	149493195	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	149493235	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.107143
6	149724861	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.2
6	149724862	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.5
5	150364983	A->G	-	ENSG00000070814	TCOF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	154011217	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	156540482	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.933333
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.8125
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.615385
3	156540549	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.233333
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
6	156936088	A->G	+	ENSG00000049618	ARID1B	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	156936263	A->G	+	ENSG00000049618	ARID1B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	156936270	A->G	+	ENSG00000049618	ARID1B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	156970032	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	156970033	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	156970230	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.3
5	157740793	A->G	+	ENSG00000113272	THG1L	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	159679825	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.1
6	159679849	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.15
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	159679899	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.06
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.321429
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.344828
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.172414
1	160996603	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.5
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.296296
1	160998027	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.16
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.5
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.304348
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.391304
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.28
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	160998162	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	165075134	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.3
4	165075135	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.636364
4	165075136	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	165075137	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	165075214	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.833333
4	165075217	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165078879	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	165078928	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	175529258	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	177227884	A->G	+	ENSG00000116044	NFE2L2	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	177227889	A->G	+	ENSG00000116044	NFE2L2	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	181237178	A->G	-	ENSG00000204628	RACK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	183672739	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.125
3	183672740	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.12
3	183672837	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	195527784	A->G	-	ENSG00000184203	PPP1R2	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	196353657	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.139535
3	196353680	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	196353682	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.075
3	196353688	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0638298
3	196353694	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	196353714	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	196353751	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.208333
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.64
3	196353754	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	196353759	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.1
3	196734407	A->G	+	ENSG00000163964	PIGX	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	197886619	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.2
2	200978506	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.3
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	200978680	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.2
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	200978742	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.8
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.785714
2	216501757	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	216501773	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.392857
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.5
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.162791
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.340909
2	216501835	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.866667
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.448276
2	216501892	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.225806
2	216501951	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	216501976	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.636364
2	216501990	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.916667
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	216502080	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.34375
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.322581
2	216502175	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	216502176	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.28
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.692308
2	216502206	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.296296
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.257143
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	216502255	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12766