Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	AA_change	Amino_Acid	Repeat	AN52
19	1992032	A->G	-	ENSG00000133243	BTBD2	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.181818
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.373134
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.115942
19	8492024	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	upstream_gene_variant	.	Alu	0.5
19	12003596	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	downstream_gene_variant	.	Alu	0.0909091
21	33262623	A->G	+	ENSG00000159110	IFNAR2	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.2
17	72838039	A->G	-	ENSG00000133195	SLC39A11	protein_coding	Intron	stop_lost	p.Ter->Trpext*?	Alu	0.363636
17	72838061	A->G	-	ENSG00000133195	SLC39A11	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.272727
17	72838064	A->G	-	ENSG00000133195	SLC39A11	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.3
17	72838066	A->G	-	ENSG00000133195	SLC39A11	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.727273
17	72838067	A->G	-	ENSG00000133195	SLC39A11	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.272727
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0361446
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.153846
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.375
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.117647
12	57483920	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	CDS	.	.	Alu	0.2
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	CDS	.	.	Alu	0.2
11	77855452	A->G	-	ENSG00000087884	AAMDC	protein_coding	CDS	.	.	Alu	0.235294
11	77855458	A->G	-	ENSG00000087884	AAMDC	protein_coding	CDS	.	.	Alu	1
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.363636
19	2292005	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.444444
19	3540017	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.2
19	3540034	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.181818
3	9987093	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.0821918
3	9987120	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.0555556
19	11865967	A->G	+	ENSG00000171291	ZNF439	protein_coding	five_prime_utr	.	.	Alu	0.0740741
19	48461318	A->G	+	ENSG00000182324	KCNJ14	protein_coding	five_prime_utr	.	.	Alu	0.363636
19	48461447	A->G	+	ENSG00000182324	KCNJ14	protein_coding	five_prime_utr	.	.	Alu	0.25
19	48461448	A->G	+	ENSG00000182324	KCNJ14	protein_coding	five_prime_utr	.	.	Alu	0.105263
19	48461472	A->G	+	ENSG00000182324	KCNJ14	protein_coding	five_prime_utr	.	.	Alu	0.4
19	48461483	A->G	+	ENSG00000182324	KCNJ14	protein_coding	five_prime_utr	.	.	Alu	0.181818
19	52636758	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.636364
19	52636764	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.769231
19	52636784	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.2
12	56731526	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.16
12	56731531	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.0769231
12	56731538	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.142857
12	57487781	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	five_prime_utr	.	.	Alu	0.166667
7	66740097	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0689655
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.16129
10	72220134	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.666667
10	72220179	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0740741
10	72220208	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.285714
10	72220209	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.285714
10	72220218	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0606061
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.18
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.372549
8	94975947	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	five_prime_utr	.	.	Alu	0.125
8	143590731	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.6
16	192589	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.272727
16	192601	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.416667
16	192609	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	192682	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.4
16	216521	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.117647
16	216582	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.111111
16	216617	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.117647
16	216622	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.277778
16	221093	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.416667
16	238517	A->G	+	ENSG00000167930	FAM234A	protein_coding	Intergenic	.	.	Alu	0.5
9	277237	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.636364
5	278609	A->G	+	ENSG00000249915	PDCD6	protein_coding	Intergenic	.	.	Alu	0.363636
5	278657	A->G	+	ENSG00000249915	PDCD6	protein_coding	Intergenic	.	.	Alu	0.466667
12	306110	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.333333
12	306118	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.5
9	356409	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.2
17	398784	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	398800	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	398903	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	398938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	399238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
17	399241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
17	399272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
17	399588	A->G	-	.	.	.	Intergenic	.	.	Alu	0.269231
17	399613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	399634	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
17	399662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	399687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.833333
17	400428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
17	400429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	400454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.037037
17	400464	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0754717
17	400825	A->G	-	.	.	.	Intergenic	.	.	Alu	0.26
17	400830	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
17	400838	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0363636
20	490170	A->G	-	ENSG00000101266	CSNK2A1	protein_coding	Intergenic	.	.	Alu	0.153846
16	499677	A->G	+	ENSG00000090565	RAB11FIP3	protein_coding	Intergenic	.	.	Alu	0.4
16	499678	A->G	+	ENSG00000090565	RAB11FIP3	protein_coding	Intergenic	.	.	Alu	0.6
20	529153	A->G	-	ENSG00000101266	CSNK2A1	protein_coding	Intergenic	.	.	Alu	0.166667
18	669484	A->G	-	ENSG00000176890	TYMS	protein_coding	Intergenic	.	.	Alu	0.25
18	684027	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.08
18	684029	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.16
18	684132	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.307692
18	684170	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.125
18	684176	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.25
18	684267	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.117647
18	684988	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.285714
18	684997	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.125
18	685136	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.111111
18	685139	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.388889
19	692555	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.181818
19	692996	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.2
18	696453	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.117647
18	696483	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.115385
18	697583	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.25
18	697585	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.357143
18	697841	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.222222
18	697866	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0555556
18	697891	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.227273
18	697914	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.914286
18	697932	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.166667
18	697976	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.133333
18	698061	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.136364
18	698066	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	706930	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.238095
18	706956	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.26087
18	706957	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.130435
18	706978	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.117647
18	729822	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.181818
12	764460	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.3
12	764513	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.545455
12	764515	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.181818
12	764557	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.25
4	775281	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.272727
18	787232	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.117647
10	900264	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.153846
10	900271	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.25
10	900511	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.272727
10	900748	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.105263
10	900752	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.1
10	900889	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.214286
10	900896	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.125
10	902782	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.363636
12	923078	A->G	+	ENSG00000002016	RAD52	protein_coding	Intergenic	.	.	Alu	0.3
12	923093	A->G	+	ENSG00000002016	RAD52	protein_coding	Intergenic	.	.	Alu	0.333333
19	1033357	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.2
19	1033397	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.111111
19	1033398	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.105263
19	1033450	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.176471
19	1033458	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.411765
19	1033488	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.15
19	1035667	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.181818
19	1035668	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.181818
12	1298271	A->G	+	ENSG00000082805	ERC1	protein_coding	Intergenic	.	.	Alu	0.136364
12	1298278	A->G	+	ENSG00000082805	ERC1	protein_coding	Intergenic	.	.	Alu	0.142857
12	1298387	A->G	+	ENSG00000082805	ERC1	protein_coding	Intergenic	.	.	Alu	0.0833333
X	1342765	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1349172	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
17	1354795	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.166667
17	1354801	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.25
X	1357090	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
X	1357396	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1360656	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0869565
X	1360722	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0869565
X	1360728	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.185185
X	1360800	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.133333
X	1360807	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.111111
X	1363018	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.384615
X	1363530	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.416667
X	1363538	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1363539	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.133333
X	1363583	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1363805	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.352941
X	1363812	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.4375
X	1363817	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.214286
X	1363848	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.294118
X	1363858	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.5
X	1363926	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.333333
X	1364235	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1364247	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1364257	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1364266	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1364367	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1364369	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.454545
X	1364379	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.692308
X	1364408	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.545455
X	1364478	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.307692
X	1364486	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.230769
X	1364563	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.35
X	1364674	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
X	1364677	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.272727
X	1364702	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.08
X	1377245	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.111111
X	1377303	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1377308	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.333333
X	1377309	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.5
X	1381683	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.416667
X	1382837	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
X	1382880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1382889	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1382890	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1382900	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
X	1382916	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1382959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383012	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1383097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1383104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
X	1383120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
X	1383135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1383150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	1383180	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1383215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383277	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1383284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
X	1383358	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	1383364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1383380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.388889
X	1383431	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
X	1383451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.352941
X	1383528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383540	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
X	1383794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383795	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1385081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
17	1387961	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.142857
17	1388011	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0833333
17	1388022	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.382353
17	1388063	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.384615
17	1388203	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.2
17	1388453	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.166667
17	1447733	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.5
12	1473509	A->G	+	ENSG00000082805	ERC1	protein_coding	Intergenic	.	.	Alu	0.272727
7	1504963	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
7	1504989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	1586625	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.3
19	1586866	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.181818
19	1587104	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.545455
19	1587170	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.181818
1	1652864	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.2
6	1674670	A->G	-	ENSG00000112699	GMDS	protein_coding	Intergenic	.	.	Alu	0.4
6	1674672	A->G	-	ENSG00000112699	GMDS	protein_coding	Intergenic	.	.	Alu	0.181818
4	1701325	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.142857
4	1701426	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.3
1	1732965	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
16	1754664	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	1838537	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.25
1	1871348	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.214286
1	1871360	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1871371	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1871419	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.733333
1	1872130	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1872153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1884103	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	1884170	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.111111
1	1884199	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1884350	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
4	1884944	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.466667
4	1884947	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.266667
4	1884948	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.266667
4	1884949	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.133333
4	1884950	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.2
4	1885003	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.142857
1	1885695	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.4
4	1894435	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.7
4	1894497	A->G	+	ENSG00000109685	NSD2	protein_coding	Intergenic	.	.	Alu	0.7
17	2038036	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2038054	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2038055	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.5
17	2038061	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.294118
17	2038111	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	2038129	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.363636
17	2038204	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.454545
17	2038218	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.521739
17	2038245	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.666667
17	2038253	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.0833333
17	2038307	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.142857
16	2260190	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.214286
16	2260218	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.222222
16	2260241	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.315789
16	2260248	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.222222
16	2260252	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.105263
16	2260253	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.111111
16	2260324	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0689655
16	2260325	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0666667
16	2260337	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.142857
16	2260338	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	1
6	2282984	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.111111
19	2292027	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292028	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.272727
19	2292036	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.157895
19	2292077	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.117647
19	2292081	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.121212
19	2292094	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2292097	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.111111
19	2292113	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.421053
19	2292283	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292291	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292300	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1875
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	2292521	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.125
19	2292590	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.4
19	2292594	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.454545
19	2292619	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.3
19	2293104	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2293139	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2293145	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.285714
19	2293942	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.727273
19	2293948	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.461538
19	2294034	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.153846
6	2294443	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.666667
6	2294448	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.928571
6	2294470	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.416667
6	2294605	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.4
6	2294726	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.846154
6	2294732	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.214286
6	2294806	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.0952381
19	2295544	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.173913
19	2295574	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.15
19	2295583	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.125
19	2295615	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1
19	2295616	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1
19	2295621	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	2295642	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	2319413	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	2335814	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.117647
7	2356715	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.133333
7	2458615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
4	2493565	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2493679	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.3
4	2543751	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.111111
4	2543754	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.117647
4	2558152	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.307692
X	2606163	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	2644986	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
X	2651388	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.277778
X	2651389	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
X	2661778	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	2707096	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.266667
X	2707097	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.142857
X	2707245	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.222222
X	2725050	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.537037
X	2725140	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0454545
X	2725141	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0444444
X	2730776	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.111111
X	2730782	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0666667
X	2730820	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0606061
X	2730837	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.117647
X	2739550	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.272727
X	2739591	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.285714
X	2739971	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0909091
X	2739981	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.318182
X	2744198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
X	2744279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
X	2744742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28125
X	2744772	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
X	2744773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	2744794	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
X	2744814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2745779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	2756910	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.1875
7	2756979	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.166667
7	2757027	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.181818
7	2757028	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.65625
7	2757064	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.0689655
7	2757069	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.785714
7	2757315	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.24
7	2757330	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.107143
7	2764197	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.1875
7	2765771	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.133333
6	2837321	A->G	-	ENSG00000021355	SERPINB1	protein_coding	Intergenic	.	.	Alu	0.0909091
Y	2937336	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.416667
Y	2937373	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.3
Y	2937377	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.3
16	2938863	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.153846
16	2938884	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.214286
16	2938885	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.230769
16	2939650	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.153846
Y	2946905	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	2949719	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.1
Y	2949770	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.25
17	2999691	A->G	+	ENSG00000132359	RAP1GAP2	protein_coding	Intergenic	.	.	Alu	0.2
17	2999692	A->G	+	ENSG00000132359	RAP1GAP2	protein_coding	Intergenic	.	.	Alu	0.7
20	3066982	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
20	3067123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
10	3075725	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.142857
10	3075782	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.153846
4	3140114	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.25
19	3181593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
19	3182338	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
19	3182378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	3182382	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	3182404	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	3182622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	3183723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	3183724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
19	3183741	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
19	3183751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	3470375	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.195652
9	3470599	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.1
19	3484229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
19	3484250	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	3484253	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	3484256	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	3484294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.714286
19	3489420	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	3489692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
19	3489734	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	3489911	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	3501629	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.142857
9	3501653	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.461538
9	3501654	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.461538
9	3501694	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.157895
9	3501751	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.142857
9	3501752	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.285714
9	3501760	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.772727
9	3501761	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.409091
9	3501788	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.25
9	3501824	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.25
9	3501830	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.5
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.15
2	3541909	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.1
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.133333
2	3541935	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.107143
2	3541936	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.111111
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.136364
16	3569677	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.333333
16	3574208	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.181818
16	3574216	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.181818
16	3574218	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.363636
11	3698462	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.583333
11	3701322	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.15
11	3701327	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.227273
11	3701328	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.272727
11	3701753	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.08
11	3701814	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.571429
11	3701818	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.153846
11	3701822	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.103448
11	3701824	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	1
11	3702116	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3702126	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3743073	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.272727
11	3782636	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1
11	3782641	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3782655	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.08
11	3782699	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3782707	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3789978	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.133333
X	3819039	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.181818
X	3819087	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.166667
X	3819139	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.4
20	3879107	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	3909630	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.142857
17	3909642	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.133333
17	3909643	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.125
17	3909664	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.230769
17	3909681	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.3
17	3911107	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	3911207	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0606061
17	3911237	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0454545
17	3911260	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.047619
17	3911276	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.254902
17	3912469	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0392157
20	3912702	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.277778
20	3912703	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.611111
20	3912704	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.125
20	3912711	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.352941
20	3912727	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.111111
20	3912764	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.181818
20	3912768	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.4
20	3912794	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.26087
20	3912800	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.142857
20	3912803	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.0714286
20	3912829	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.333333
20	3912865	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.3
20	3912906	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.25
17	3934052	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.133333
17	3934724	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.181818
20	3981617	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.692308
20	3981644	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.785714
20	3986854	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.142857
16	4437833	A->G	+	ENSG00000103423	DNAJA3	protein_coding	Intergenic	.	.	Alu	0.181818
17	4442520	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.153846
17	4442533	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.142857
17	4442547	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.111111
16	4462795	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4462809	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.636364
17	4469498	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.2
17	4469512	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.166667
7	4708883	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.181818
20	4804475	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.230769
16	4817068	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.3
16	4817082	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.272727
20	4819059	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.176471
20	4819100	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.185185
20	4819136	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.0952381
20	4819145	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.235294
20	4831575	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	5127723	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	5127752	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.222222
3	5128012	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0769231
3	5128115	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.166667
7	5196992	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.235294
7	5197033	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.210526
7	5321873	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0909091
7	5321875	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.380952
7	5321876	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.1
7	5321943	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.5
7	5321944	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.227273
7	5322023	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.9
7	5322045	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5322415	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.5
7	5322423	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.181818
7	5322492	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.111111
7	5325861	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.105263
7	5325874	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.15
7	5325961	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0645161
7	5334435	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.230769
7	5334502	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.125
7	5334503	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.130435
7	5334526	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.133333
17	5339798	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.3
7	5347325	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.818182
7	5366439	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0909091
7	5366452	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0952381
7	5366468	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.666667
7	5366503	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.157895
7	5366506	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.352941
7	5366512	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.105263
7	5366570	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.533333
7	5398069	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.125
7	5398308	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.230769
7	5398309	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5398331	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.142857
7	5398347	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0714286
7	5398363	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.185185
7	5398364	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.115385
7	5398402	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0952381
7	5398451	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0882353
7	5398465	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0588235
7	5398782	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5398820	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.133333
7	5398823	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.1875
7	5398896	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.117647
7	5398897	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.1875
17	5399158	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.1
17	5399164	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.125
7	5414480	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.125
7	5414541	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0666667
7	5414545	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0666667
7	5414551	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.153846
7	5414641	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.153846
7	5415444	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.346154
7	5415445	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.37037
7	5415488	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0810811
7	5415506	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0810811
7	5415510	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.666667
7	5415515	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.268293
7	5415516	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.121951
7	5415547	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.103448
7	5415557	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0869565
7	5415563	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.347826
7	5415572	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0833333
7	5415582	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.230769
7	5415627	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.105263
7	5415672	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.222222
7	5436773	A->G	+	ENSG00000155034	FBXL18	protein_coding	Intergenic	.	.	Alu	0.2
7	5436781	A->G	+	ENSG00000155034	FBXL18	protein_coding	Intergenic	.	.	Alu	0.153846
7	5436801	A->G	+	ENSG00000155034	FBXL18	protein_coding	Intergenic	.	.	Alu	0.25
20	5601507	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.230769
19	5655379	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.4
19	5655380	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.3
19	5715721	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.2
19	5715732	A->G	+	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	5911638	A->G	-	ENSG00000183354	KIAA2026	protein_coding	Intergenic	.	.	Alu	0.181818
19	6046449	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.153846
19	6046457	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6046494	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.0869565
19	6046498	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.12
19	6046720	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.333333
19	6046751	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.133333
19	6046888	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.272727
19	6046902	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.16
19	6046965	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.222222
19	6046974	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.47619
19	6046993	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.333333
19	6047038	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.111111
10	6153670	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.3
19	6379126	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	6397120	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.375
18	6408740	A->G	-	ENSG00000154655	L3MBTL4	protein_coding	Intergenic	.	.	Alu	0.105263
1	6548220	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.416667
1	6647039	A->G	-	ENSG00000007923	DNAJC11	protein_coding	Intergenic	.	.	Alu	0.5
1	6647206	A->G	-	ENSG00000007923	DNAJC11	protein_coding	Intergenic	.	.	Alu	0.181818
1	6647210	A->G	-	ENSG00000007923	DNAJC11	protein_coding	Intergenic	.	.	Alu	0.2
1	6647220	A->G	-	ENSG00000007923	DNAJC11	protein_coding	Intergenic	.	.	Alu	0.545455
1	6844462	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	6844470	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.2
1	6844549	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.214286
4	6864660	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.2
4	6864665	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.2
17	7472583	A->G	-	ENSG00000174282	ZBTB4	protein_coding	Intergenic	.	.	Alu	0.166667
19	7474260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
7	7593723	A->G	+	ENSG00000164654	MIOS	protein_coding	Intergenic	.	.	Alu	0.5
7	7593811	A->G	+	ENSG00000164654	MIOS	protein_coding	Intergenic	.	.	Alu	0.333333
6	7745943	A->G	+	ENSG00000153162	BMP6	protein_coding	Intergenic	.	.	Alu	0.181818
19	7976887	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.428571
19	7976891	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.125
19	7976925	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.5
20	8229935	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.214286
20	8229981	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.105263
17	8247581	A->G	-	ENSG00000178971	CTC1	protein_coding	Intergenic	.	.	Alu	0.333333
17	8247582	A->G	-	ENSG00000178971	CTC1	protein_coding	Intergenic	.	.	Alu	0.470588
17	8271701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	8271758	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
20	8402724	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.05
1	8403503	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.05
1	8403536	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0952381
1	8403929	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8403963	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.333333
1	8403968	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.416667
1	8404062	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8404066	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
20	8411790	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
17	8455647	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8471985	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.272727
19	8472024	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.1875
19	8472077	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0714286
19	8477567	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.181818
1	8480410	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.166667
1	8480573	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8480574	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
19	8492028	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.16
19	8492069	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.111111
19	8492096	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.153846
19	8493890	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.2
19	8494665	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.117647
19	8494705	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	8494717	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.117647
20	8496397	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8497488	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
1	8529382	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0869565
1	8529444	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.15
1	8529534	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.125
1	8545848	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.133333
1	8545884	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.333333
1	8545929	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.266667
1	8545969	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.227273
1	8546128	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.473684
1	8582645	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.189189
1	8601112	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.08
1	8601157	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.111111
1	8601206	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.130435
1	8601235	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.117647
1	8605910	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8607622	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.157895
1	8607624	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.333333
1	8607635	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.35
1	8607674	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.08
1	8607678	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.333333
1	8607802	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0606061
1	8607822	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.173913
1	8607854	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.117647
1	8607858	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.206897
1	8607863	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.111111
1	8607864	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.0769231
1	8607890	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.107143
1	8607894	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.137931
1	8607895	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.142857
1	8607919	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.130435
1	8607957	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.176471
1	8607998	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.08
1	8608001	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.12
1	8608161	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
18	8616814	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.241379
18	8616818	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.25
18	8616849	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.26087
18	8616913	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.3125
18	8632199	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.153846
1	8697618	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8729309	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.8
2	8746231	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.166667
2	8746251	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.642857
1	8775057	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.384615
1	8775058	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.692308
1	8775327	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.7
1	8775328	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8775462	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.454545
1	8775522	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.363636
1	8775532	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8776516	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
20	8804770	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.25
20	8804950	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
4	9041460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
11	9162840	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9194864	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.368421
11	9194884	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9194951	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9230047	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9230369	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
11	9230381	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9230420	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.428571
11	9230474	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.277778
11	9263313	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
11	9263358	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.25
11	9263385	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9263425	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.529412
11	9263426	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9289216	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.357143
11	9289263	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9289276	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.8
17	9352611	A->G	-	ENSG00000170310	STX8	protein_coding	Intergenic	.	.	Alu	0.2
18	9375052	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.2
11	9444492	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.230769
11	9444497	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.214286
11	9444657	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.2
11	9444658	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.357143
11	9444704	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.5625
2	9506469	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9506478	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.136364
2	9506531	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9507774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.357143
2	9507851	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.454545
2	9507877	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.4
2	9523999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.714286
19	9532421	A->G	-	ENSG00000130818	ZNF426	protein_coding	Intergenic	.	.	Alu	0.294118
19	9532465	A->G	-	ENSG00000130818	ZNF426	protein_coding	Intergenic	.	.	Alu	0.125
1	9564844	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.181818
1	9564849	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.153846
19	9569991	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.304348
19	9570123	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.2
19	9583423	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.153846
2	9607153	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.0909091
2	9607154	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.129032
11	9833532	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.133333
11	9833908	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.153846
11	9837834	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.583333
11	9837835	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.133333
11	9837840	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.411765
11	9837849	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.384615
11	9838017	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.176471
1	9927426	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.117647
1	9927477	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.153846
1	9927518	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9927937	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
1	9927962	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9928049	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.294118
1	9928080	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.266667
1	9928089	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.384615
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.366667
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
3	10152258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
3	10152278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
3	10152281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.323529
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170213
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.846154
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.448276
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.628571
3	10152634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.458333
3	10152887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10152941	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225806
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
3	10152966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.119048
3	10152967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0888889
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.128205
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.254545
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.118644
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.189655
3	10153148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.028169
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.273973
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.122807
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.128571
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	1
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0615385
3	10153223	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0684932
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0273973
3	10153295	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0547945
3	10153298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0285714
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0597015
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0735294
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	1
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
3	10153370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.390244
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
3	10153408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145833
3	10153409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0612245
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.480769
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137255
1	10154652	A->G	+	ENSG00000130939	UBE4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	10154715	A->G	+	ENSG00000130939	UBE4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	10154743	A->G	+	ENSG00000130939	UBE4B	protein_coding	Intergenic	.	.	Alu	0.0952381
1	10154748	A->G	+	ENSG00000130939	UBE4B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	10199526	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.2
2	10199527	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.142857
2	10199689	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.181818
2	10199908	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.181818
2	10199928	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.125
2	10199934	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.105263
2	10199945	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.3
2	10199985	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.08
2	10200007	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.148148
2	10200030	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.157895
2	10200033	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.428571
2	10200076	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.315789
2	10200085	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	1
2	10200094	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.25
2	10200107	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.208333
2	10200876	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.142857
2	10200956	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.363636
2	10213360	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
2	10213373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
2	10213377	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
19	10326949	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.181818
16	10459364	A->G	+	ENSG00000166669	ATF7IP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	10500320	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.2
19	10616015	A->G	+	ENSG00000129353	SLC44A2	protein_coding	Intergenic	.	.	Alu	0.2
2	10638629	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.25
2	10638764	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.2
2	10638892	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.642857
2	10638963	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.8
2	10638967	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.363636
2	10639006	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.3
2	10639011	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.909091
19	10734145	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.2
19	10932938	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.75
19	10932952	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.133333
19	10933055	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.117647
19	10933063	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.384615
19	10933084	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.153846
19	10933092	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.285714
19	10933093	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.142857
19	10933125	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.166667
19	10963117	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.285714
19	10963118	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.266667
19	10963191	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.333333
19	10963259	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.153846
19	10963293	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.230769
12	11025108	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.230769
12	11025129	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.434783
12	11025182	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.235294
12	11025186	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.142857
7	11068300	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	0.181818
12	11085099	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.3
8	11132413	A->G	-	ENSG00000171044	XKR6	protein_coding	Intergenic	.	.	Alu	0.133333
12	11245614	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.5
12	11245640	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.470588
12	11245681	A->G	+	ENSG00000275119	AC244131.2	lincRNA	Intergenic	.	.	Alu	0.181818
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.3
19	11450029	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.272727
19	11450096	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.363636
19	11450223	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.2
19	11450392	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.333333
19	11450402	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.157895
19	11450409	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	1
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.789474
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.105263
12	11660349	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0769231
12	11660395	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.428571
12	11660403	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11660404	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11660452	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11660468	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.333333
12	11660478	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.12
12	11660479	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.265306
12	11660511	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.04
12	11660519	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11660520	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.275862
12	11660527	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.196429
12	11660562	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.157895
12	11660583	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.105263
12	11675739	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0666667
12	11716210	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0365854
12	11733225	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
12	11733365	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0740741
12	11734374	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0731707
12	11734392	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0571429
12	11734397	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.119048
12	11734444	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0512821
12	11734445	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0769231
12	11777087	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0740741
12	11784328	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11784329	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0952381
12	11808902	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0392157
12	11808993	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0645161
12	11809029	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0540541
12	11809034	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0487805
12	11810081	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.3
12	11818256	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
3	11823799	A->G	-	ENSG00000144559	TAMM41	protein_coding	Intergenic	.	.	Alu	1
12	11824658	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.157895
12	11824659	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.157895
12	11824707	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11824724	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0645161
8	11825355	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.2
8	11825381	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.133333
8	11825523	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.3
8	11825524	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.2
12	11845072	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
12	11845097	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.636364
12	11845750	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0714286
12	11845751	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0666667
19	11865799	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.428571
19	11865906	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.307692
19	11865907	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.153846
19	11865916	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.117647
16	11889843	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.2
16	11889844	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.3
19	11896058	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.133333
19	11896076	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.125
19	11896077	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.235294
19	11896099	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.277778
19	11896137	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.2
16	11898525	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.2
16	11911655	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	11911691	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.153846
19	11932237	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.25
19	11932269	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.181818
19	12004259	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.1
19	12004308	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.238095
19	12004371	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.357143
19	12004387	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
19	12004391	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
10	12026740	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.153846
10	12026753	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.2
19	12029442	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.181818
19	12029443	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.181818
18	12317036	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.166667
10	12356559	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.142857
10	12358355	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.181818
10	12371429	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.4
10	12373412	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.136364
10	12374021	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.0666667
10	12374117	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.1
10	12406675	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.3
10	12406678	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.2
10	12456669	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.153846
10	12456749	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.142857
10	12457687	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.727273
19	12523158	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.363636
19	12523203	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.384615
19	12523204	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.461538
19	12523260	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.1875
19	12523261	A->G	-	ENSG00000196826	AC008758.1	protein_coding	Intergenic	.	.	Alu	0.133333
3	12534636	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.363636
3	12534683	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.375
3	12534697	A->G	+	ENSG00000154743	TSEN2	protein_coding	Intergenic	.	.	Alu	0.5
8	12540078	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.153846
8	12540079	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.166667
8	12540768	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.357143
8	12543617	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.181818
8	12543649	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.2
8	12543700	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.166667
8	12543743	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.2
8	12544462	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.2
8	12544571	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.181818
8	12544576	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.181818
10	12578692	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.428571
19	12660819	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.166667
19	12660856	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.384615
19	12660864	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.153846
19	12660887	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.157895
19	12660896	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.428571
18	12694832	A->G	-	ENSG00000101624	CEP76	protein_coding	Intergenic	.	.	Alu	0.2
12	12728482	A->G	+	ENSG00000178878	APOLD1	protein_coding	Intergenic	.	.	Alu	0.272727
Y	12826327	A->G	+	ENSG00000114374	USP9Y	protein_coding	Intergenic	.	.	Alu	0.333333
Y	12826328	A->G	+	ENSG00000114374	USP9Y	protein_coding	Intergenic	.	.	Alu	0.25
Y	12826336	A->G	+	ENSG00000114374	USP9Y	protein_coding	Intergenic	.	.	Alu	0.363636
19	12921637	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
19	12921773	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
18	12967799	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.0909091
18	12967803	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.0952381
18	12967820	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.142857
18	12967834	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.105263
Y	13262656	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.181818
Y	13262702	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.4
18	13321689	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.363636
18	13321700	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.153846
18	13321740	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.3
18	13321741	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.4
18	13321746	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.230769
Y	13385830	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	13395556	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13395563	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.5
Y	13395941	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.125
Y	13396031	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.322581
Y	13396104	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.285714
Y	13396106	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.1875
18	13411141	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.181818
18	13459036	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.4
18	13459081	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.2
18	13459120	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.15
18	13459138	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.411765
18	13459258	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.692308
18	13459277	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.181818
18	13459522	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.142857
18	13459617	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.2
6	13648212	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0952381
6	13648286	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.333333
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.285714
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.3125
11	13703964	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.176471
11	13703994	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.1
11	13703999	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	13704026	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	13704027	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	13755996	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.375
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.705882
19	13832473	A->G	-	.	.	.	Intergenic	.	.	Alu	0.325581
19	13832506	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	13832540	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
19	13832541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	13832973	A->G	-	.	.	.	Intergenic	.	.	Alu	0.722222
19	13833048	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	13837503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0697674
19	13837515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
19	13837517	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
19	13837543	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
19	13837703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0338983
19	13837884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0235294
19	13837899	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0315789
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.119565
19	13838043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0566038
19	13838060	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0677966
19	13838061	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0655738
19	13838083	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0615385
19	13838110	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
19	13838119	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
19	13838120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.26087
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.325581
19	13838197	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
19	13838286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.170732
19	13838300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
19	13838304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6875
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	13838492	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
19	14389557	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14389570	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.259259
19	14389573	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.107143
19	14389655	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14389724	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14389725	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14390485	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14391657	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.12
19	14398568	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.153846
19	14399623	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14399636	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.266667
19	14399664	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.294118
19	14414799	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.153846
19	14414805	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.153846
19	14414808	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.181818
19	14414884	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.125
16	14596684	A->G	-	ENSG00000140694	PARN	protein_coding	Intergenic	.	.	Alu	0.6
10	14906997	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.2
10	14907135	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.25
10	14907136	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.272727
10	14907139	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.2
10	14946187	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.2
3	14981509	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.125
3	15018807	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.333333
3	15018838	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.142857
3	15018854	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.133333
3	15018881	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.25
3	15018895	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.166667
3	15018927	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.181818
21	15035695	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.0625
10	15075708	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	15075711	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
16	15079757	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.181818
3	15248841	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.2
3	15248911	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.166667
6	15254921	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.272727
6	15298559	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
19	15345738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	15357781	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.2
19	15357782	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.3
3	15410351	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.153846
19	15463366	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.2
19	15463372	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.363636
17	15523448	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.166667
17	15523475	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.153846
17	15523481	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.1875
3	15567348	A->G	-	ENSG00000131373	HACL1	protein_coding	Intergenic	.	.	Alu	0.166667
1	15692002	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.3
1	15692019	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.6
16	15700997	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15701090	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15701100	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.6
16	15701165	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15701187	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.4
16	15952758	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.3
16	15952820	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.130435
16	15952839	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.206897
16	15952929	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	15953216	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15967654	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15999426	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.3
16	15999429	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15999430	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.454545
16	15999484	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15999492	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.214286
16	15999504	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.266667
16	16026387	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
17	16050360	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
17	16050361	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
16	16053636	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.25
16	16053666	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.3
16	16057236	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.111111
16	16057279	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
19	16080601	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16080628	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16080691	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.208333
19	16080692	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.32
19	16080705	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.08
19	16080764	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16082791	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0444444
19	16082834	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0512821
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.102564
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.571429
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.5
19	16083268	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16083297	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.357143
19	16083317	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16083323	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16083324	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.52381
19	16083333	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.105263
19	16083367	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16083395	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16083396	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16083425	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.105263
19	16085168	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	1
19	16085194	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.214286
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.625
19	16085318	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16085353	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16085354	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.233333
19	16085844	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0869565
19	16085893	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16085990	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0512821
19	16086010	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0731707
19	16086024	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0810811
16	16089608	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.15625
19	16098236	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16098248	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16098368	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0769231
19	16150268	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.142857
19	16150445	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.1875
19	16150459	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.1
19	16150464	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.263158
19	16150467	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16150527	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16150845	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.12
16	16153663	A->G	+	ENSG00000091262	ABCC6	protein_coding	Intergenic	.	.	Alu	0.3
16	16153789	A->G	+	ENSG00000091262	ABCC6	protein_coding	Intergenic	.	.	Alu	0.3
16	16153817	A->G	+	ENSG00000091262	ABCC6	protein_coding	Intergenic	.	.	Alu	0.454545
19	16155868	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.157895
19	16156082	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.1
19	16156092	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.47619
19	16156172	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.0666667
19	16156176	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.172414
19	16156397	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.277778
19	16156464	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.176471
19	16156733	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.103448
19	16156786	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.137931
19	16156787	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.147059
19	16156823	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.142857
19	16156875	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.151515
19	16156907	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.2
6	16256328	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.333333
6	16256387	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.181818
6	16256410	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.3
6	16256462	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.3
2	16348530	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	16353333	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	16354855	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.3
2	16354856	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.181818
2	16356715	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.2
2	16379095	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.153846
2	16379201	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.235294
2	16379202	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.117647
2	16379210	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.125
17	16383879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	16419402	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.666667
2	16419406	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.75
2	16419412	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.09375
2	16419470	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.259259
2	16419478	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.172414
2	16419480	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	1
2	16419481	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.793103
2	16419542	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.2
2	16419547	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.388889
2	16419548	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.35
2	16419561	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.695652
2	16446421	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
2	16446447	A->G	-	.	.	.	Intergenic	.	.	Alu	0.129032
2	16446459	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0652174
2	16446464	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0681818
2	16446474	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
2	16457704	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
2	16457713	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	16457726	A->G	-	.	.	.	Intergenic	.	.	Alu	0.761905
2	16457727	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
2	16457758	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	16457765	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	16457766	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	16457768	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	16457770	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
2	16457771	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
2	16457797	A->G	-	.	.	.	Intergenic	.	.	Alu	0.470588
2	16457862	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	16457863	A->G	-	.	.	.	Intergenic	.	.	Alu	0.714286
2	16458842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
X	16596073	A->G	-	ENSG00000047230	CTPS2	protein_coding	Intergenic	.	.	Alu	0.3
19	16638369	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16638371	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.923077
19	16638389	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	1
19	16638432	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.428571
19	16638460	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16638468	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16638473	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.388889
19	16638474	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.352941
19	16638477	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.631579
19	16638526	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.272727
19	16638568	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.384615
19	16640278	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.142857
19	16640280	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.2
19	16640281	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.2
19	16644186	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16644281	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.125
19	16644289	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16644320	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16644502	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16644537	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.125
19	16644575	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.15
7	16654013	A->G	+	ENSG00000136261	BZW2	protein_coding	Intergenic	.	.	Alu	0.3
6	16689451	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16734845	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.153846
11	16740482	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.181818
11	16740489	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.409091
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.357143
11	16740521	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.121212
11	16740562	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.08
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.538462
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.26087
11	16740838	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0740741
11	16740839	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.142857
11	16740844	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.225806
11	16740927	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0555556
11	16740931	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0487805
11	16740938	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0697674
11	16740941	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0487805
11	16740942	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.333333
11	16740943	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0731707
11	16740944	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0526316
11	16740949	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.241379
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.40625
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.454545
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.583333
11	16756898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
11	16756904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	17081734	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
11	17131507	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.428571
11	17131550	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.363636
16	17186384	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.142857
16	17192161	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.25
16	17192237	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	17195557	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.272727
17	17245628	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	17245641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	17285559	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17298198	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.25
11	17298375	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	17298402	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.125
11	17298461	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17298465	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17298509	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.266667
11	17298520	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.266667
16	17300572	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	17300573	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.2
16	17300605	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	17300624	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	17300701	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.2
11	17336077	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	17336100	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17336104	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.272727
11	17336123	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17336675	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17336994	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.157895
11	17337015	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.117647
11	17337070	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17337106	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
16	17337863	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.111111
9	17359779	A->G	+	ENSG00000044459	CNTLN	protein_coding	Intergenic	.	.	Alu	0.2
9	17359785	A->G	+	ENSG00000044459	CNTLN	protein_coding	Intergenic	.	.	Alu	0.4
16	17402835	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.3
16	17409612	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	17409678	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.2
16	17430074	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.117647
10	17448688	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.130435
10	17448741	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.24
10	17448754	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.4
10	17448855	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.277778
10	17448857	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.111111
10	17448893	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.133333
16	17456440	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	17456476	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.254545
16	17456487	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.134615
3	17464144	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.166667
10	17592050	A->G	-	ENSG00000165996	HACD1	protein_coding	Intergenic	.	.	Alu	0.2
3	17602701	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.125
3	17602711	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.25
10	17687354	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.214286
10	17687367	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.142857
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.866667
10	17687404	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.272727
6	17814081	A->G	-	ENSG00000137177	KIF13A	protein_coding	Intergenic	.	.	Alu	0.25
8	17997838	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	17997839	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	17997942	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.1
10	18180886	A->G	+	ENSG00000165995	CACNB2	protein_coding	Intergenic	.	.	Alu	0.2
6	18220915	A->G	-	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.181818
10	18228209	A->G	+	ENSG00000165995	CACNB2	protein_coding	Intergenic	.	.	Alu	0.3
6	18238016	A->G	-	ENSG00000124795	DEK	protein_coding	Intergenic	.	.	Alu	0.153846
3	18261420	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.266667
3	18261422	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.333333
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.666667
17	18272776	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.166667
17	18272820	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.2
11	18406168	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.142857
11	18406515	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.0769231
11	18406641	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.133333
11	18521429	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.192308
11	18521431	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.148148
11	18521774	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.294118
11	18521874	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.153846
11	18521897	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.230769
11	18521901	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18521944	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.3
11	18521950	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.105263
11	18521951	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.105263
10	18652656	A->G	-	ENSG00000241058	NSUN6	protein_coding	Intergenic	.	.	Alu	0.272727
10	18652764	A->G	-	ENSG00000241058	NSUN6	protein_coding	Intergenic	.	.	Alu	0.333333
10	18652840	A->G	-	ENSG00000241058	NSUN6	protein_coding	Intergenic	.	.	Alu	0.4
20	18660091	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.230769
20	18660483	A->G	+	ENSG00000284776	AL121900.2	protein_coding	Intergenic	.	.	Alu	0.4
16	18797229	A->G	+	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	1
16	18797242	A->G	+	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	1
19	18909579	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0869565
19	18909615	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.111111
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.12
19	18909630	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.16
19	18909676	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18909786	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
Y	19050855	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.166667
1	19214870	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.214286
1	19215166	A->G	+	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.2
12	19286891	A->G	+	ENSG00000052126	PLEKHA5	protein_coding	Intergenic	.	.	Alu	0.25
12	19286928	A->G	+	ENSG00000052126	PLEKHA5	protein_coding	Intergenic	.	.	Alu	0.75
9	19306923	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.7
9	19315039	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.363636
9	19315040	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.454545
9	19315080	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.416667
9	19315081	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.272727
9	19321738	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.2
9	19322668	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.2
9	19323201	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.133333
12	19360460	A->G	+	ENSG00000052126	PLEKHA5	protein_coding	Intergenic	.	.	Alu	0.166667
X	19590685	A->G	-	ENSG00000147010	SH3KBP1	protein_coding	Intergenic	.	.	Alu	0.166667
19	19787487	A->G	+	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
10	19852177	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.181818
10	19852257	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.181818
10	19927579	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.166667
10	19927581	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.2
10	19930816	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.5
10	19930820	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.25
10	19930842	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.153846
22	19958794	A->G	+	ENSG00000093010	COMT	protein_coding	Intergenic	.	.	Alu	0.142857
22	19958798	A->G	+	ENSG00000093010	COMT	protein_coding	Intergenic	.	.	Alu	0.357143
13	19985755	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19986847	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0909091
13	19986874	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0833333
13	19986889	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.105263
13	19986927	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.142857
13	19987046	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19987328	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.272727
13	19987393	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.181818
13	19987715	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.181818
13	20044961	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	20044962	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	20046450	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0952381
13	20079167	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.125
13	20079168	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.125
13	20079199	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.105263
13	20079225	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.333333
13	20079231	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.136364
X	20131784	A->G	-	ENSG00000173674	EIF1AX	protein_coding	Intergenic	.	.	Alu	0.125
21	20133712	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
21	20238905	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	20247274	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.2
10	20247423	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.238095
2	20292491	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	20292589	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
6	20551981	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.666667
6	20552083	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.583333
6	20552084	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.384615
1	20647004	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20647538	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.2
1	20647539	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.3
1	20647556	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.363636
1	20647915	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.5
1	20647918	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.181818
1	20658897	A->G	-	ENSG00000244038	DDOST	protein_coding	Intergenic	.	.	Alu	0.272727
16	20697939	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.125
16	20697940	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.666667
16	20697945	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	20756413	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.153846
22	20759092	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.111111
13	20862008	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	20869456	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.909091
1	20913945	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
17	21041013	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.130435
17	21041022	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.263158
17	21041023	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.157895
17	21041155	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.1875
1	21061758	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
6	21114061	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.25
6	21114065	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.45
6	21114069	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.166667
6	21114071	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.142857
6	21114096	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.181818
6	21114097	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.2
19	21146259	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.181818
19	21146260	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.227273
19	21146263	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.166667
19	21146267	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.1
19	21146335	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.166667
1	21151371	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.235294
1	21151377	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.176471
1	21151510	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.136364
1	21158236	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.363636
14	21220331	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.4
19	21316199	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.578947
19	21316206	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.111111
19	21316262	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.473684
19	21316263	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.210526
16	21362650	A->G	+	.	.	.	Intergenic	.	.	Alu	0.785714
16	21362659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	21405992	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.09375
19	21406035	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.0625
19	21406060	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.0714286
19	21406071	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.105263
19	21406075	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.111111
19	21406102	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.166667
19	21406128	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.133333
19	21445713	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.111111
19	21445738	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.375
19	21445753	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.142857
19	21445760	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.133333
19	21445765	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.285714
14	21446504	A->G	-	ENSG00000100888	CHD8	protein_coding	Intergenic	.	.	Alu	0.2
19	21451764	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.7
19	21451769	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.4
19	21451770	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.2
19	21451789	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.4
13	21498503	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.1875
13	21498547	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21498567	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.1875
13	21498583	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.230769
13	21500553	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	21538158	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.0769231
19	21538200	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.235294
19	21538347	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.190476
19	21538385	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.142857
19	21538399	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.2
19	21538489	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.222222
19	21538496	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.142857
19	21538502	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.307692
13	21559636	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.4
13	21559649	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.416667
13	21559689	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.142857
13	21559698	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.153846
13	21559797	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.3
13	21559798	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
22	21615434	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.2
1	21685430	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.4
1	21685440	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.5
1	21685516	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.2
22	21724683	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.3
22	21724780	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.6
22	21724782	A->G	-	ENSG00000100027	YPEL1	protein_coding	Intergenic	.	.	Alu	0.5
1	21780906	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.454545
19	21820939	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.166667
19	21820971	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.142857
19	21820972	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.142857
19	21821034	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.538462
19	21821243	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.142857
19	21821284	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.1875
19	21821300	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.181818
19	21823619	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.133333
19	21835483	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.181818
19	21835495	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.230769
19	21835496	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.25
19	21835522	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.416667
16	21860747	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.2
16	21860771	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.25
16	21860948	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.2
16	21860949	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.428571
16	21860988	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.3
16	21864186	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.0833333
16	21864190	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.173913
16	21864322	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.190476
10	21909024	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.3
6	21910434	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.4
6	21910465	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.25
6	21910498	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.272727
19	22053261	A->G	+	ENSG00000197134	ZNF257	protein_coding	Intergenic	.	.	Alu	0.181818
3	22057686	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.0909091
3	22057787	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.117647
3	22057794	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.2
3	22057795	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.117647
1	22062629	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.3
1	22062651	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.0952381
1	22073360	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.176471
1	22073392	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.142857
1	22073418	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.173913
1	22073419	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.347826
1	22073428	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.1
1	22073548	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.142857
6	22081434	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.583333
6	22081469	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.166667
6	22081471	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.125
8	22106067	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	22106088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.727273
3	22120109	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.0869565
16	22310681	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.2
16	22310739	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.142857
16	22310741	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.214286
16	22413105	A->G	-	ENSG00000140743	CDR2	protein_coding	Intergenic	.	.	Alu	0.2
4	22512180	A->G	-	ENSG00000152990	ADGRA3	protein_coding	Intergenic	.	.	Alu	0.230769
10	22561770	A->G	-	ENSG00000150867	PIP4K2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	22617076	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.384615
8	22617093	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.823529
8	22617094	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.294118
8	22632988	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.285714
14	22908113	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.384615
14	22908509	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.181818
14	22916154	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.4
14	22916346	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.166667
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.642857
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.75
14	23082505	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	23082521	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.125
14	23082537	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.133333
14	23082582	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.4
14	23082583	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.214286
14	23082589	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.230769
14	23082687	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	23082802	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23082878	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.3
14	23082956	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.4
19	23107329	A->G	+	ENSG00000183850	ZNF730	protein_coding	Intergenic	.	.	Alu	0.2
19	23112686	A->G	+	ENSG00000183850	ZNF730	protein_coding	Intergenic	.	.	Alu	0.4
1	23154349	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.5
1	23154440	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	23154457	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	23154464	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.75
1	23154783	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.526316
18	23158241	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.153846
18	23158286	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.142857
18	23181446	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.388889
18	23181451	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.333333
22	23195519	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.142857
18	23223413	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.181818
18	23223447	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.25
18	23223458	A->G	+	ENSG00000134508	CABLES1	protein_coding	Intergenic	.	.	Alu	0.142857
1	23333999	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.166667
1	23334024	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.166667
13	23370003	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.3
13	23370137	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.5
7	23501887	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	23501942	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
7	23502447	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
7	23503503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
7	23503507	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
18	23506093	A->G	+	ENSG00000141452	RMC1	protein_coding	Intergenic	.	.	Alu	0.3
18	23506099	A->G	+	ENSG00000141452	RMC1	protein_coding	Intergenic	.	.	Alu	0.181818
7	23515358	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.08
7	23515394	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.117647
7	23515490	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	23518489	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.181818
7	23520785	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.130435
22	23577610	A->G	-	ENSG00000128322	IGLL1	protein_coding	Intergenic	.	.	Alu	0.166667
22	23657035	A->G	-	ENSG00000228315	GUSBP11	processed_transcript	Intergenic	.	.	Alu	0.111111
22	23657105	A->G	-	ENSG00000228315	GUSBP11	processed_transcript	Intergenic	.	.	Alu	0.3
22	23657640	A->G	-	ENSG00000228315	GUSBP11	processed_transcript	Intergenic	.	.	Alu	0.2
22	23657670	A->G	-	ENSG00000228315	GUSBP11	processed_transcript	Intergenic	.	.	Alu	0.133333
2	23701581	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.916667
2	23701626	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.6875
2	23701629	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.5625
2	23701630	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.125
2	23701631	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.125
2	23702098	A->G	-	ENSG00000119771	KLHL29	protein_coding	Intergenic	.	.	Alu	0.529412
22	23746695	A->G	-	ENSG00000187792	ZNF70	protein_coding	Intergenic	.	.	Alu	0.4
2	23769781	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
2	23769783	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.545455
2	23769801	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23779447	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23779448	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
1	23781334	A->G	+	ENSG00000057757	PITHD1	protein_coding	Intergenic	.	.	Alu	0.25
2	23781408	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.333333
2	23781537	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.666667
2	23781553	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.117647
2	23781565	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.235294
2	23781578	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0833333
2	23781582	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.26087
2	23781602	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.136364
2	23781603	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.08
2	23781621	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.176471
2	23781951	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23781957	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
2	23781987	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.111111
2	23781992	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.176471
2	23782012	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.26087
2	23782044	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	23817233	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.08
2	23834408	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23845672	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.5
2	23845677	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.294118
2	23857880	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0952381
16	23873250	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.125
16	23873324	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.230769
3	23953287	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.2
1	23974130	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.181818
1	23974159	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.2
1	23974161	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.181818
19	24054941	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.5
19	24054949	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.692308
19	24054950	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.6
19	24055109	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.588235
19	24055115	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.375
19	24055158	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.333333
19	24055344	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.115385
19	24055349	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.642857
19	24055378	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.111111
19	24055379	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0769231
19	24055396	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.647059
19	24055418	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24055499	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.3
19	24061882	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.3125
19	24061883	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.125
19	24069697	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24082459	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24082503	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.3
2	24089855	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.333333
2	24089864	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.166667
2	24089919	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.5625
19	24089936	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0952381
19	24089975	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0909091
19	24090001	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.478261
19	24090002	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.782609
19	24090010	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	24090061	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
19	24090078	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.315789
19	24090087	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.0909091
19	24090091	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.285714
19	24090099	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.105263
19	24090110	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24090113	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24090153	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.105263
19	24090163	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
2	24090327	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.272727
2	24090463	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.272727
2	24092456	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.181818
2	24092495	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.230769
19	24097702	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24097725	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
2	24108774	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.2
14	24170152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	24170153	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
14	24170886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
14	24170956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
14	24170976	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
14	24170977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
14	24171039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.534884
14	24171040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
14	24171058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
14	24171059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
14	24171078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
14	24171150	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
14	24212512	A->G	-	ENSG00000254505	CHMP4A	protein_coding	Intergenic	.	.	Alu	0.162791
18	24327272	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.272727
18	24327280	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.153846
18	24328174	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.235294
18	24328180	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.466667
18	24328327	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.2
18	24328332	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.272727
18	24328333	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.3
18	24363584	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.2
18	24363773	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.142857
18	24363780	A->G	-	ENSG00000141447	OSBPL1A	protein_coding	Intergenic	.	.	Alu	0.384615
22	24382610	A->G	+	ENSG00000100014	SPECC1L	protein_coding	Intergenic	.	.	Alu	0.272727
2	24514167	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.142857
4	24515536	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
2	24523485	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.25
2	24523678	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.1875
2	24523739	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.105263
2	24523740	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.157895
2	24523742	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.117647
2	24523805	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.25
2	24523832	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.166667
2	24523851	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.153846
2	24523865	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.142857
2	24547878	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.181818
2	24547946	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.166667
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.454545
22	24573004	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.15
22	24573021	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.416667
22	24573053	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.307692
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.2
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0714286
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	1
22	24573192	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0645161
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.194444
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.142857
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.314286
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.235294
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.173913
22	24573796	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0869565
22	24573798	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.136364
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.416667
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.4
22	24573833	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.133333
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.388889
22	24574602	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0697674
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.175
22	24574615	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.138889
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.655172
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.21875
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.382353
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.129032
22	24574681	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.107143
22	24574691	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0526316
22	24574694	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0465116
22	24574703	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0408163
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.28
22	24574708	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.150943
22	24574725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.139535
22	24574731	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0454545
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.433962
22	24574751	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0408163
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.54
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.163934
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0793651
22	24576495	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.272727
22	24576514	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.3
6	24710363	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.4
2	24730953	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.307692
2	24730982	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.230769
2	24730983	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.142857
6	24802975	A->G	-	ENSG00000282804	AL512428.1	protein_coding	Intergenic	.	.	Alu	0.142857
6	24802977	A->G	-	ENSG00000282804	AL512428.1	protein_coding	Intergenic	.	.	Alu	0.153846
6	24954588	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.2
6	24954594	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.181818
6	24965205	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.153846
6	24965289	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.125
6	24965297	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.133333
6	24968051	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.2
12	25231226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.130435
12	25231250	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.157895
12	25231314	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.0952381
8	25254654	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.1
8	25254677	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.25
8	25256560	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
1	25352471	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.166667
1	25354427	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.2
1	25354431	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.7
15	25431481	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.181818
15	25433348	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.285714
1	25438769	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.25
1	25438819	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.125
1	25438820	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.153846
1	25438874	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.117647
1	25451785	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
22	25645878	A->G	+	ENSG00000100077	GRK3	protein_coding	Intergenic	.	.	Alu	0.2
15	25768617	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.4
1	25895165	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	25895199	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.2
1	25895200	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.117647
1	25895214	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.375
1	25895235	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.15
1	25895311	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.25
1	25895362	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.153846
2	26041462	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
18	26169195	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.5
18	26169214	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.272727
18	26169219	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.454545
12	26424845	A->G	-	ENSG00000123104	ITPR2	protein_coding	Intergenic	.	.	Alu	0.6
10	26482971	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.3
10	26503469	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.2
10	26503514	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.272727
10	26543283	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.133333
10	26543291	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.4375
10	26543307	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.357143
10	26543308	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.307692
10	26543387	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.454545
10	26543388	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.8
10	26564574	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.105263
10	26564656	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.210526
10	26564683	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.111111
10	26564688	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.111111
1	26720089	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26736203	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26736230	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26736231	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.333333
10	26773313	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.6
1	26777983	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26777990	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.4
12	27039036	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27039098	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.214286
12	27039102	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.333333
12	27039320	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27039343	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.545455
12	27039344	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.636364
12	27039409	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.173913
12	27039432	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.666667
12	27039479	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.1
12	27039482	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.333333
12	27039724	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.153846
12	27039780	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.1875
12	27039790	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.5
2	27064469	A->G	-	ENSG00000084693	AGBL5	protein_coding	Intergenic	.	.	Alu	0.133333
2	27064505	A->G	-	ENSG00000084693	AGBL5	protein_coding	Intergenic	.	.	Alu	0.230769
2	27064842	A->G	-	ENSG00000084693	AGBL5	protein_coding	Intergenic	.	.	Alu	0.2
2	27064891	A->G	-	ENSG00000084693	AGBL5	protein_coding	Intergenic	.	.	Alu	0.125
2	27064958	A->G	-	ENSG00000084693	AGBL5	protein_coding	Intergenic	.	.	Alu	0.1875
10	27125958	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.3
10	27185565	A->G	+	ENSG00000120539	MASTL	protein_coding	Intergenic	.	.	Alu	0.181818
17	27302153	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.222222
2	27345918	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.1875
2	27345934	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.142857
2	27346164	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.142857
2	27346172	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.153846
2	27348975	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.2
12	27456033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	27456483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
12	27456487	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
12	27456538	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
12	27456543	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8125
12	27456557	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
12	27456563	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
7	27645485	A->G	-	ENSG00000106049	HIBADH	protein_coding	Intergenic	.	.	Alu	0.272727
12	27793200	A->G	+	ENSG00000087448	KLHL42	protein_coding	Intergenic	.	.	Alu	0.153846
1	27818145	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.15
1	27818260	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.272727
1	27818266	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.181818
22	27909882	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.272727
22	27910083	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.15
22	27910222	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.166667
22	27910323	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.25
13	28006832	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28011989	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28011990	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.266667
13	28012003	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28012007	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28012026	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28012031	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28019248	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28020418	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28028512	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.416667
13	28028614	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.416667
13	28028641	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28028836	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.125
13	28028855	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.130435
13	28028860	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.12
13	28028867	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.24
13	28028874	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.407407
13	28028879	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.37931
13	28028884	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.25
13	28028910	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28028920	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.25
13	28028964	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.125
13	28028970	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.157895
13	28028995	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28029000	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.15
13	28029055	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.8
13	28081972	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.3
2	28139170	A->G	+	ENSG00000158019	BABAM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	28139186	A->G	+	ENSG00000158019	BABAM2	protein_coding	Intergenic	.	.	Alu	0.166667
13	28146723	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28146814	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28146815	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28146854	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28146965	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28150526	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.315789
13	28156874	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0571429
13	28188408	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28188486	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0625
13	28188521	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.272727
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.222222
13	28188552	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0769231
13	28189525	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28193486	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28193487	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28193522	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.136364
13	28193532	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28193596	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.212121
13	28193622	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.21875
13	28193695	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28193937	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28193993	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28194036	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.5625
13	28194037	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.588235
13	28194077	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28194078	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.115385
13	28194102	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0869565
13	28198166	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.5
13	28198230	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.416667
13	28205657	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28205736	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28205750	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28241209	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0645161
13	28261744	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.176471
13	28264277	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28264305	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.136364
13	28264306	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28264332	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28264386	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28264418	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.666667
13	28264419	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1875
13	28264448	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28264460	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.714286
15	28304470	A->G	-	ENSG00000128731	HERC2	protein_coding	Intergenic	.	.	Alu	0.357143
15	28304532	A->G	-	ENSG00000128731	HERC2	protein_coding	Intergenic	.	.	Alu	0.2
15	28304535	A->G	-	ENSG00000128731	HERC2	protein_coding	Intergenic	.	.	Alu	0.230769
15	28304538	A->G	-	ENSG00000128731	HERC2	protein_coding	Intergenic	.	.	Alu	0.153846
15	28304545	A->G	-	ENSG00000128731	HERC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	28411062	A->G	+	ENSG00000075426	FOSL2	protein_coding	Intergenic	.	.	Alu	0.0454545
1	28481634	A->G	+	ENSG00000204138	PHACTR4	protein_coding	Intergenic	.	.	Alu	0.2
10	28525616	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.166667
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.75
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.181818
10	28525742	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.3
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.75
10	28538357	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.181818
10	28538386	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0869565
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.354839
10	28538435	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0652174
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.113636
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.106383
10	28538488	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0444444
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0666667
10	28538634	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.05
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.105263
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.189189
10	28538711	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0540541
1	28541661	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	28543057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	28667125	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.25
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.823529
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.111111
17	28721991	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.4
17	28722007	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.142857
17	28722026	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.0952381
17	28722034	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.117647
17	28722058	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.178571
17	28722068	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.16129
17	28722100	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.102564
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.75
17	28722315	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.030303
17	28722320	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.0806452
2	28763953	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28764205	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0566038
2	28764268	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28764313	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28764326	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.333333
2	28764340	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0869565
2	28764345	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.210526
2	28764349	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28764435	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0869565
2	28764693	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	28764743	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28764744	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28764810	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28764846	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.103448
2	28764870	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.136364
2	28764871	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28770098	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.277778
2	28770156	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.263158
2	28770175	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28770196	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28770208	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.176471
2	28784720	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28784733	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28784773	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0731707
2	28784800	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0425532
2	28784805	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0784314
2	28784813	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28784814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0961538
2	28784840	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0555556
2	28786247	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.230769
2	28786253	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.163265
2	28786641	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0434783
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.311688
2	28786660	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.183099
22	28797564	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.125
22	28798401	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	28798405	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.142857
22	28798446	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0338983
22	28798502	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0526316
22	28798516	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.06
22	28798536	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0652174
22	28798829	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.195122
22	28798848	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	28798852	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.108108
22	28804922	A->G	+	ENSG00000226471	Z93930.2	antisense	Intergenic	.	.	Alu	0.181818
2	28807367	A->G	+	ENSG00000163806	SPDYA	protein_coding	Intergenic	.	.	Alu	0.384615
2	28807403	A->G	+	ENSG00000163806	SPDYA	protein_coding	Intergenic	.	.	Alu	0.2
16	28839814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	28857071	A->G	-	ENSG00000171103	TRMT61B	protein_coding	Intergenic	.	.	Alu	0.666667
8	28909052	A->G	+	ENSG00000147421	HMBOX1	protein_coding	Intergenic	.	.	Alu	0.125
16	28918433	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.4
2	28939846	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.181818
2	28939852	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.7
2	28939853	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.7
16	28958188	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.210526
16	28958241	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.117647
16	28958248	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.25
16	28958271	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.166667
16	28958301	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.181818
16	28958319	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.333333
17	29063734	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
16	29119579	A->G	+	ENSG00000284649	AC009093.8	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
16	29119631	A->G	+	ENSG00000284649	AC009093.8	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
2	29159609	A->G	+	ENSG00000115295	CLIP4	protein_coding	Intergenic	.	.	Alu	0.181818
1	29173549	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29173565	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.454545
1	29173574	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.454545
1	29173626	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29173627	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.230769
1	29173628	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.307692
1	29173631	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29177392	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.142857
1	29177419	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0645161
1	29177420	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0645161
1	29177485	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0487805
22	29180506	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
22	29183326	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
22	29183337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114286
22	29183345	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
22	29198198	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
22	29227544	A->G	+	ENSG00000186998	EMID1	protein_coding	Intergenic	.	.	Alu	0.181818
22	29227558	A->G	+	ENSG00000186998	EMID1	protein_coding	Intergenic	.	.	Alu	0.2
22	29278874	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.133333
22	29278875	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.125
12	29319264	A->G	-	ENSG00000064763	FAR2	protein_coding	Intergenic	.	.	Alu	0.111111
22	29345469	A->G	-	ENSG00000100280	AP1B1	protein_coding	Intergenic	.	.	Alu	0.2
16	29392635	A->G	+	ENSG00000254206	NPIPB11	protein_coding	Intergenic	.	.	Alu	0.2
16	29410741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
16	29422726	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
16	29422731	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
16	29422746	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
16	29424226	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	29424240	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
16	29424241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	29558123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	29657407	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
16	29671795	A->G	+	ENSG00000277669	AC009086.2	protein_coding	Intergenic	.	.	Alu	0.6
16	29671801	A->G	+	ENSG00000277669	AC009086.2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29701860	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29770732	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29780593	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29780598	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29780600	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.272727
17	29780601	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.363636
17	29780602	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.4
17	29785637	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29785638	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.6
17	29791983	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.133333
22	29945649	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.166667
8	30178244	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.153846
16	30283308	A->G	-	ENSG00000183604	SMG1P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.7
16	30283313	A->G	-	ENSG00000183604	SMG1P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	30343673	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.153846
13	30343776	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.7
13	30343831	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.363636
13	30356705	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.166667
13	30366593	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.117647
13	30366620	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.363636
6	30599575	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
15	30669651	A->G	+	ENSG00000285035	AC091057.7	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
15	30669654	A->G	+	ENSG00000285035	AC091057.7	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
X	30698768	A->G	+	ENSG00000241886	AC112496.1	sense_intronic	Intergenic	.	.	Alu	0.2
17	30720647	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
17	30720649	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	30723928	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
17	30723977	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
17	30764098	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
17	30787728	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30787738	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.692308
17	30787744	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
17	30787745	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
17	30787766	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.538462
17	30787810	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.833333
17	30787845	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	30787867	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
17	30787879	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.285714
17	30787971	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
17	30788311	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
17	30975212	A->G	+	ENSG00000181481	RNF135	protein_coding	Intergenic	.	.	Alu	0.25
14	30980545	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.3
1	30987467	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0606061
1	31015480	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
14	31019972	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.214286
14	31019995	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.142857
1	31025619	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.230769
1	31025623	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.25
1	31025667	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31025684	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.157895
1	31025694	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.210526
1	31025823	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	31039093	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31039361	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.4
1	31043340	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.230769
1	31043343	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.230769
1	31048677	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31048746	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31051441	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.1875
1	31051442	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
8	31070861	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.227273
8	31070899	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.555556
8	31070925	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.142857
8	31070926	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.409091
8	31071717	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.181818
8	31075496	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.130435
8	31075621	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.135135
16	31122624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.583333
16	31122625	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31122692	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.357143
16	31122723	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31122734	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
16	31122754	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.722222
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.352941
16	31122770	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31122801	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.190476
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.285714
16	31122844	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1875
16	31122861	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.3
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.727273
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.363636
16	31123397	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.454545
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.8
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.571429
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.785714
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.428571
16	31123526	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1875
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31123538	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31123560	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.157895
16	31123581	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0588235
16	31123607	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31123610	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	31123611	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31123632	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.241379
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.387097
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.53125
16	31123662	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.131579
16	31123664	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.189189
14	31136933	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.181818
14	31137198	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.4
17	31190212	A->G	+	ENSG00000196712	NF1	protein_coding	Intergenic	.	.	Alu	0.8
12	31309733	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.0952381
22	31331546	A->G	-	ENSG00000100105	PATZ1	protein_coding	Intergenic	.	.	Alu	0.615385
16	31452253	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.5
16	31452279	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.294118
16	31453062	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.117647
16	31453102	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.222222
16	31453132	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.357143
16	31453133	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.230769
16	31453268	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.25
16	31453276	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.153846
3	31542865	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.25
3	31542902	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.125
3	31542998	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.130435
20	31565045	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.133333
20	31565221	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.181818
20	31565224	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.166667
20	31565250	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.15
22	31638729	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.181818
22	31638733	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.166667
22	31638978	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	1
22	31639105	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.181818
6	31752292	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.294118
6	31752538	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.384615
6	31752599	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.25
2	31906069	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	31906084	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.25
2	31906105	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0588235
2	31906110	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.275862
2	31906150	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.133333
2	31906171	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.285714
2	31906175	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.25
2	31906242	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.214286
1	31922752	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.230769
2	31930713	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.25
2	31930774	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.25
2	31930778	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.08
2	31930784	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.545455
2	31930792	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.235294
2	31990514	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	31990628	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.26087
2	31994093	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	31994098	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.230769
2	31999575	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.230769
2	31999587	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	31999618	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	31999639	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.642857
2	31999938	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.583333
2	31999988	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.545455
2	32000067	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	32000089	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.133333
2	32000167	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.117647
12	32000294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
12	32000300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
12	32000304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
2	32000569	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.3
2	32000603	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.142857
1	32019419	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.133333
18	32048007	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.2
18	32048075	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.3
18	32058035	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.176471
1	32059078	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.142857
1	32065738	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.1
1	32065799	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.294118
1	32065803	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.222222
14	32137893	A->G	+	ENSG00000100852	ARHGAP5	protein_coding	Intergenic	.	.	Alu	0.333333
14	32153871	A->G	+	ENSG00000100852	ARHGAP5	protein_coding	Intergenic	.	.	Alu	0.166667
5	32164997	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.545455
10	32336072	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.3
1	32360313	A->G	-	ENSG00000162526	TSSK3	protein_coding	Intergenic	.	.	Alu	0.181818
20	32361477	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.153846
10	32364077	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.181818
2	32371048	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.52381
2	32371092	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.333333
20	32375322	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.153846
17	32389664	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	32389670	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	32389700	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	32391938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	32391944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	32391945	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	32392123	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	32392124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	32392199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	32392327	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
17	32392339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.705882
17	32392434	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
17	32392435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
17	32392564	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
17	32394182	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	32394206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	32394280	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	32396226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	32396290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
17	32396334	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	32399671	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	32399681	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
13	32406041	A->G	-	ENSG00000139597	N4BP2L1	protein_coding	Intergenic	.	.	Alu	0.3
20	32407285	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.142857
5	32433007	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
5	32436424	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.111111
2	32455265	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0681818
2	32455269	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0487805
19	32460264	A->G	+	ENSG00000178904	DPY19L3	protein_coding	Intergenic	.	.	Alu	0.230769
19	32460290	A->G	+	ENSG00000178904	DPY19L3	protein_coding	Intergenic	.	.	Alu	0.133333
17	32461207	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.2
17	32461217	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.6
2	32462772	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
2	32462778	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.222222
2	32462836	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.4
2	32462845	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0952381
2	32462864	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.136364
2	32462865	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.173913
2	32462877	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.1875
15	32468031	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
13	32492421	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.2
13	32493118	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.166667
13	32493129	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.142857
2	32520585	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32520732	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32520756	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.642857
2	32520762	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
7	32542488	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.2
1	32547879	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.4
1	32548013	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.2
1	32676423	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.4375
1	32676490	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.166667
1	32676822	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.153846
12	32701792	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.142857
12	32701802	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.153846
12	32701808	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	32701827	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.142857
12	32701828	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.214286
12	32701831	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.142857
12	32701845	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.5
12	32701853	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.357143
12	32702057	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.5
12	32702058	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.5
12	32702078	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.3
12	32702091	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	32702113	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.25
1	32790087	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.666667
1	32790088	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.583333
1	32802911	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.181818
1	32802945	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.173913
1	32803043	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.105263
1	32803050	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.263158
1	32803115	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.285714
1	32803121	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.1
1	32803139	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.181818
1	32803174	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.166667
1	32803246	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.0952381
11	32924437	A->G	+	ENSG00000060749	QSER1	protein_coding	Intergenic	.	.	Alu	0.153846
11	32924480	A->G	+	ENSG00000060749	QSER1	protein_coding	Intergenic	.	.	Alu	0.307692
11	32924489	A->G	+	ENSG00000060749	QSER1	protein_coding	Intergenic	.	.	Alu	0.25
1	33022445	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.117647
1	33022452	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.7
1	33022453	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.153846
1	33022458	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.636364
1	33022520	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.181818
9	33027928	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.214286
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	33038085	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.214286
9	33038105	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.153846
9	33041465	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
21	33240566	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33240685	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.3125
21	33249276	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
11	33265653	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
11	33265730	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.115385
11	33265830	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	33268117	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.3
11	33268136	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	33268323	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.25
11	33268353	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.4
11	33268363	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33268412	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33268500	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.107143
11	33268506	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
11	33268516	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.318182
11	33273327	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33273360	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
11	33279158	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33282536	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
21	33284176	A->G	+	ENSG00000249624	AP000295.1	protein_coding	Intergenic	.	.	Alu	0.181818
6	33307590	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.307692
6	33307595	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.214286
11	33341954	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33341980	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.538462
11	33342044	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	33342063	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.15
3	33434377	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.277778
3	33434410	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.176471
3	33434426	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.176471
3	33434435	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	33434449	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.318182
3	33434462	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.130435
3	33434560	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	33434851	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.111111
3	33434890	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.129032
3	33434951	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.157895
3	33434960	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.136364
3	33495578	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
21	33525152	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.0909091
21	33525493	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.357143
21	33526136	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.181818
21	33526211	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.666667
21	33526231	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.1
21	33526295	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.318182
21	33526308	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.333333
21	33526311	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.266667
21	33526330	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.157895
21	33526335	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.111111
21	33526367	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.2
21	33526377	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.133333
21	33526416	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.166667
21	33529563	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.5625
3	33547927	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.12
3	33548035	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.16
3	33548436	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.05
3	33548442	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.0555556
3	33548820	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.0769231
3	33548830	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.0645161
11	33877527	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.166667
11	33877567	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.210526
11	33877589	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.125
11	33877603	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.125
11	33877616	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.4
9	33958601	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	33958627	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	33979488	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.166667
9	33979492	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.181818
9	33990732	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.153846
9	33990733	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.230769
9	33990774	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.16
9	33990775	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.0769231
9	33990777	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.481481
9	33990813	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.115385
9	33990819	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.0909091
9	33990909	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.105263
9	33990910	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.1
5	34175081	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
19	34192737	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.6
19	34192743	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.5
19	34192793	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.421053
19	34192832	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.133333
19	34192850	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34192864	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.5
19	34192885	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.181818
19	34192918	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.266667
19	34202781	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.181818
19	34202784	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.727273
19	34202794	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.272727
19	34203614	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.214286
19	34203618	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.466667
19	34203683	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.25
19	34203688	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.111111
19	34205209	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.222222
19	34205366	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0833333
19	34205407	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.3
15	34326800	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.3
15	34326830	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.2
20	34378309	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34378310	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34431151	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.3
20	34431854	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.4
20	34431897	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.105263
19	34439651	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.117647
19	34441334	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.235294
20	34451169	A->G	+	ENSG00000231795	ITCH-IT1	sense_intronic	Intergenic	.	.	Alu	0.3
20	34451337	A->G	+	ENSG00000231795	ITCH-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
14	34458629	A->G	-	ENSG00000165389	SPTSSA	protein_coding	Intergenic	.	.	Alu	0.272727
14	34523691	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.4
6	34758867	A->G	+	ENSG00000124562	SNRPC	protein_coding	Intergenic	.	.	Alu	0.214286
6	34758899	A->G	+	ENSG00000124562	SNRPC	protein_coding	Intergenic	.	.	Alu	0.166667
21	34804815	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.08
21	34804816	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0689655
21	34853993	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.181818
21	34863692	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0754717
21	34863749	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0666667
21	34863755	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.113636
6	34885178	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.125
6	34886526	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.333333
15	34930969	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.181818
21	34948813	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.153846
15	34950152	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.3
21	34962031	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.172414
21	34962041	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0740741
10	35011159	A->G	-	ENSG00000108094	CUL2	protein_coding	Intergenic	.	.	Alu	0.272727
20	35029841	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.7
20	35029865	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.727273
20	35031315	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.181818
20	35031495	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.133333
20	35032641	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.153846
20	35032644	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.133333
20	35032647	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.142857
20	35032744	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.181818
20	35032751	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.5
9	35047205	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
9	35047250	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	35047277	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
18	35063738	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.130435
18	35063806	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.294118
18	35064088	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.25
18	35064090	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.0909091
18	35064093	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.173913
17	35076088	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.6
17	35076173	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35076217	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.3
17	35076221	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.454545
14	35108860	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.133333
14	35108861	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
10	35355522	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.2
10	35355544	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.545455
10	35355557	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.2
22	35405754	A->G	+	ENSG00000100297	MCM5	protein_coding	Intergenic	.	.	Alu	0.583333
22	35405755	A->G	+	ENSG00000100297	MCM5	protein_coding	Intergenic	.	.	Alu	0.384615
20	35482716	A->G	-	ENSG00000126001	CEP250	protein_coding	Intergenic	.	.	Alu	0.2
6	35659528	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35683568	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
20	35726270	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0869565
20	35727865	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
9	35765536	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
9	35765554	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	35765577	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	35770266	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.384615
19	35770272	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.272727
19	35770306	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.8
19	35770614	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.214286
19	35770622	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.307692
19	35770623	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.153846
19	35770628	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.166667
19	35770631	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.272727
19	35770724	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.2
19	35771082	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
19	35771085	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
20	35775501	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.0666667
20	35775502	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.103448
20	35775572	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.541667
20	35775594	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.105263
20	35775595	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.1
20	35775603	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.157895
20	35775604	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.263158
20	35775633	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.454545
20	35775634	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.0909091
20	35775675	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.75
20	35775950	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.333333
20	35793878	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.117647
20	35793887	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.125
20	35794139	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.2
20	35797348	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.181818
20	35797366	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.153846
20	35799386	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.294118
20	35799391	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.105263
20	35799420	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.125
20	35802792	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.117647
20	35803042	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.111111
20	35803070	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.388889
20	35803071	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.222222
20	35803099	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.2
20	35803105	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.6
20	35803131	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.4375
20	35803167	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.235294
20	35803201	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.157895
20	35803204	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.105263
20	35803428	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.214286
20	35803458	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.266667
20	35803463	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.166667
1	35819612	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.25
20	35821315	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.2
20	35821472	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.1875
20	35821473	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.210526
20	35821591	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.0869565
20	35822579	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.142857
20	35823571	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.210526
20	35823572	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.1
17	35827189	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.157895
17	35827215	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.714286
17	35827221	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.153846
17	35827225	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.115385
17	35827261	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.333333
17	35827495	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.1
17	35827518	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.254902
17	35827559	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.0487805
17	35827585	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.105263
17	35827586	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.241379
20	35827627	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.1875
17	35827660	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.057971
17	35827662	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35827663	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.857143
20	35827668	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.166667
1	35829997	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.153846
1	35830088	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.133333
6	35838147	A->G	-	ENSG00000096063	SRPK1	protein_coding	Intergenic	.	.	Alu	0.6
20	35882881	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.15
20	35882948	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.133333
20	35883093	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.117647
7	35888610	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
7	35888618	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.230769
7	35888619	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
7	35888634	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
7	35888664	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
7	35888740	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
1	35933562	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.117647
18	36019219	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.0454545
18	36019246	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.794872
18	36019272	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.153846
18	36019312	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.129032
18	36019317	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.097561
18	36019374	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.0833333
18	36019379	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	1
18	36019380	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.962963
18	36019402	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.185185
18	36024244	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.25
18	36024279	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.4
18	36024285	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.3
6	36030576	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.111111
9	36153043	A->G	+	ENSG00000122694	GLIPR2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	36216455	A->G	+	ENSG00000196357	ZNF565	protein_coding	Intergenic	.	.	Alu	0.181818
1	36237651	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.363636
1	36265905	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
22	36314751	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.181818
22	36315916	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.181818
22	36376073	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.125
22	36376160	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
6	36450259	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.166667
6	36458742	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.2
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0701754
1	36476768	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0234375
1	36476776	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0247934
1	36476785	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0223881
1	36476825	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0857143
1	36476869	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0315789
1	36476878	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.13253
1	36476889	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0224719
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.076087
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.157303
1	36477832	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.727273
1	36477856	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.384615
1	36477897	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.636364
9	36480801	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.1
6	36508211	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.176471
7	36537629	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.363636
7	36537657	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.2
7	36537716	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.181818
7	36537717	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.166667
7	36538159	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.2
6	36541960	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0909091
6	36542028	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
20	36575988	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.1
20	36578234	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.1875
20	36578236	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.375
20	36578293	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.526316
20	36578294	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.176471
20	36578303	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.133333
20	36578325	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.133333
20	36578328	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.133333
20	36578334	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578348	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.3
20	36580570	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.333333
20	36580630	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36580679	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36580689	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.190476
20	36580734	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.1
20	36583433	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0833333
20	36583832	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0869565
20	36583940	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0769231
20	36584024	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.16
20	36585082	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	36585288	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.0769231
20	36585383	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.1
20	36585384	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.1
18	36793835	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.3
19	36809196	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.545455
19	36809213	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.2
19	36809261	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.105263
19	36809262	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.166667
19	36809316	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.384615
19	36809326	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.5
19	36828617	A->G	+	ENSG00000197863	ZNF790	protein_coding	Intergenic	.	.	Alu	0.4
20	36913918	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	36913953	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.266667
5	36968659	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.461538
5	36968675	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.133333
5	36968683	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.153846
2	36992957	A->G	-	ENSG00000008869	HEATR5B	protein_coding	Intergenic	.	.	Alu	0.181818
20	37063961	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.181818
7	37080566	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0588235
7	37080576	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.142857
20	37085204	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	37085270	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	37098455	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.357143
3	37098485	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.111111
3	37098499	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.142857
3	37102595	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.615385
3	37102596	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.454545
9	37131551	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.181818
9	37131565	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.125
9	37131566	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.117647
2	37154646	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.363636
2	37154755	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.454545
9	37161454	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.25
9	37164402	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.444444
9	37164635	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.75
9	37164643	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.541667
9	37164809	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.272727
9	37164828	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.5
7	37200146	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.05
7	37200147	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.138889
7	37200185	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.142857
7	37200206	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0810811
7	37200212	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.432432
7	37200300	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.277778
7	37200308	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.263158
7	37200318	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.125
7	37200356	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.133333
7	37200722	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.181818
7	37200748	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.181818
7	37200749	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	37215960	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.3
5	37215970	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.307692
5	37215996	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.3
5	37216040	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.181818
5	37216055	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.733333
5	37216281	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.214286
5	37216547	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.2
5	37225057	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.181818
9	37233954	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.2
3	37260344	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	37260473	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.133333
3	37260493	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.230769
3	37260548	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37260587	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.307692
3	37262319	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.142857
3	37262320	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.153846
3	37262379	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0869565
3	37262438	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.235294
3	37265906	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.583333
19	37343275	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.4
21	37410941	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.214286
21	37411103	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.133333
21	37411233	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.235294
7	37426433	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
21	37426656	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.176471
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.928571
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.708333
21	37427135	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.111111
21	37427211	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0606061
21	37427241	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.318182
21	37427245	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.769231
21	37427386	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0869565
9	37510105	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.444444
9	37510108	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.388889
9	37510146	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.533333
4	37618942	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0298507
4	37618977	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0327869
4	37619008	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0363636
4	37619017	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0816327
4	37619072	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0714286
4	37619073	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0714286
4	37619098	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0740741
4	37619102	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0666667
4	37619125	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0666667
17	37634077	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.2
4	37673360	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.0408163
4	37681693	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.166667
4	37681722	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.2
22	37857249	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.666667
22	37857276	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.2
6	37870178	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.214286
6	37870520	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0952381
6	37870549	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37870581	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.125
8	37893104	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
8	37893171	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.125
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.357143
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.421053
8	37893213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.235294
8	37893269	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.307692
8	37893278	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.230769
6	37934576	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
22	37946624	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.181818
22	37946631	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.181818
22	37946679	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.181818
22	37946693	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.111111
22	37946694	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.176471
22	37946753	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.105263
22	37946754	A->G	+	ENSG00000128346	C22orf23	protein_coding	Intergenic	.	.	Alu	0.333333
6	37971757	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37976406	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
10	38021530	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.153846
10	38021534	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
10	38021538	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
10	38022448	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.333333
10	38022481	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.0740741
10	38022492	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.235294
10	38022495	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.25
10	38022550	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.285714
10	38022559	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.0555556
10	38022569	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.0882353
10	38022599	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.0740741
10	38023901	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.363636
10	38024038	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.12
10	38024080	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.214286
10	38024091	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.210526
10	38031423	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.111111
10	38031490	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.105263
10	38031696	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.272727
10	38046976	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.153846
10	38047506	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.1
19	38167046	A->G	+	ENSG00000105738	SIPA1L3	protein_coding	Intergenic	.	.	Alu	0.142857
19	38167047	A->G	+	ENSG00000105738	SIPA1L3	protein_coding	Intergenic	.	.	Alu	0.357143
8	38239105	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.5
8	38239118	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.2
8	38239119	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.130435
8	38239140	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.272727
8	38239198	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.1875
8	38239227	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.125
8	38239228	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38239240	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.294118
8	38239289	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.125
8	38239316	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.230769
8	38239438	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.117647
8	38239439	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.157895
8	38239477	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.1875
8	38239540	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.318182
8	38239544	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.35
8	38239566	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.411765
8	38239572	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.333333
8	38239576	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.363636
8	38239865	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.285714
8	38239878	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.2
8	38239883	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.333333
8	38239905	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.2
8	38239922	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.3
8	38239984	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.105263
8	38239985	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.176471
8	38239997	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.136364
2	38321851	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.3
21	38461942	A->G	-	ENSG00000157554	ERG	protein_coding	Intergenic	.	.	Alu	0.075
21	38461943	A->G	-	ENSG00000157554	ERG	protein_coding	Intergenic	.	.	Alu	0.0769231
21	38461965	A->G	-	ENSG00000157554	ERG	protein_coding	Intergenic	.	.	Alu	0.0961538
21	38462119	A->G	-	ENSG00000157554	ERG	protein_coding	Intergenic	.	.	Alu	0.0689655
6	38465906	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.8
22	38711736	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
21	38744657	A->G	-	ENSG00000223806	LINC00114	lincRNA	Intergenic	.	.	Alu	0.166667
12	38814441	A->G	-	ENSG00000139117	CPNE8	protein_coding	Intergenic	.	.	Alu	0.2
20	38817372	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0909091
20	38841434	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0434783
19	38844958	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.153846
19	38844997	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.357143
20	38851300	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.25
20	38851303	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.266667
20	38851305	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.133333
20	38851952	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.178571
20	38851977	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0740741
20	38884810	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.266667
20	38884920	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38884950	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.6
20	38885019	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.4
8	38939974	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
4	39027908	A->G	-	ENSG00000121895	TMEM156	protein_coding	Intergenic	.	.	Alu	0.2
1	39030570	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.230769
1	39030584	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.277778
1	39030592	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.0909091
1	39030982	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.230769
1	39030987	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.181818
1	39043961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	39044004	A->G	+	.	.	.	Intergenic	.	.	Alu	0.45
1	39044005	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
1	39044187	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
1	39052768	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
1	39052769	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
1	39052905	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	39052906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
3	39058996	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.111111
2	39097643	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.214286
2	39111764	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39111797	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	39111862	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39111868	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.133333
2	39112436	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39115553	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39115637	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39115689	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39115697	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.230769
14	39178384	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.153846
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.4
14	39178453	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.153846
14	39178838	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.4
17	39250189	A->G	-	ENSG00000265460	AC015910.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.9
17	39286674	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.153846
17	39286686	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.307692
17	39286689	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.307692
17	39286690	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.153846
17	39286980	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.181818
17	39287069	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.2
1	39344392	A->G	+	ENSG00000127603	MACF1	protein_coding	Intergenic	.	.	Alu	0.142857
19	39358426	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.2
19	39358452	A->G	+	ENSG00000179134	SAMD4B	protein_coding	Intergenic	.	.	Alu	0.363636
3	39409006	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.181818
2	39474918	A->G	+	ENSG00000231312	AC007388.1	antisense	Intergenic	.	.	Alu	0.25
1	39476404	A->G	+	ENSG00000127603	MACF1	protein_coding	Intergenic	.	.	Alu	0.3
1	39476420	A->G	+	ENSG00000127603	MACF1	protein_coding	Intergenic	.	.	Alu	0.125
1	39476428	A->G	+	ENSG00000127603	MACF1	protein_coding	Intergenic	.	.	Alu	0.2
1	39476550	A->G	+	ENSG00000127603	MACF1	protein_coding	Intergenic	.	.	Alu	0.166667
17	39560071	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.166667
4	39725202	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39725227	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39725230	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.210526
4	39725236	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.133333
4	39725256	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.210526
4	39725262	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.15
4	39748538	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.28
4	39748542	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.115385
4	39760014	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.3
4	39760015	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39760016	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39768311	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.285714
4	39768634	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39774492	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.133333
4	39774534	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.125
4	39896126	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.176471
4	39896127	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.352941
4	39896164	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.0909091
4	39896574	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.466667
7	39988963	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.4
7	39988964	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.363636
22	40048430	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.142857
22	40048437	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.133333
22	40048482	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.133333
22	40048520	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
7	40064236	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.181818
22	40072644	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.214286
22	40072757	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.1875
22	40072785	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
4	40082155	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.272727
4	40082196	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.153846
22	40133849	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.142857
22	40133850	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.142857
22	40149595	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.272727
22	40163267	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
1	40185923	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.117647
1	40185971	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.153846
1	40214789	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.25
4	40226438	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.142857
4	40226451	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.117647
4	40229488	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.0952381
4	40229523	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.210526
4	40229586	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.1875
4	40235705	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.333333
19	40276503	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.454545
19	40276506	A->G	-	ENSG00000105221	AKT2	protein_coding	Intergenic	.	.	Alu	0.4
22	40344278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
22	40354709	A->G	+	ENSG00000239900	ADSL	protein_coding	Intergenic	.	.	Alu	0.2
1	40399647	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	40459598	A->G	+	ENSG00000188846	RPL14	protein_coding	Intergenic	.	.	Alu	0.2
3	40459720	A->G	+	ENSG00000188846	RPL14	protein_coding	Intergenic	.	.	Alu	0.133333
3	40459732	A->G	+	ENSG00000188846	RPL14	protein_coding	Intergenic	.	.	Alu	0.125
15	40693662	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.333333
15	40693734	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.214286
1	40707049	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.111111
1	40707145	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.3
1	40707705	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.3
1	40707741	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.2
1	40707749	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.2
1	40707783	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.214286
15	40986392	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.5
15	40986401	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.272727
15	40986410	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.25
15	40986421	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.2
15	40986453	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.166667
15	40986457	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.0769231
15	40986489	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.1875
15	40986500	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.111111
15	40986501	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.111111
15	40986504	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.133333
13	40997366	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.148148
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.172414
13	40997386	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	40997428	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	41012757	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
15	41037843	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.142857
15	41038077	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.153846
15	41038087	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.230769
15	41038152	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.214286
15	41038175	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.166667
15	41038179	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.25
15	41038192	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.142857
15	41038209	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.363636
15	41038211	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.153846
15	41038212	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.166667
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.235294
20	41040709	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41040721	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.08
20	41041214	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.333333
20	41041216	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.115385
20	41041297	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.108108
20	41041298	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0555556
20	41041308	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0571429
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.138889
20	41041356	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.121212
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.135135
15	41071484	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.272727
13	41079408	A->G	+	ENSG00000120688	WBP4	protein_coding	Intergenic	.	.	Alu	0.2
15	41091782	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.166667
X	41198953	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.2
X	41199077	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.428571
3	41215264	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.285714
3	41215269	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.285714
3	41215333	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0408163
19	41266180	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	41266493	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.222222
19	41284875	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.2
9	41379594	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
22	41520965	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.166667
20	41609989	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.1875
20	41609994	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.75
20	41609995	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.454545
20	41610036	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.136364
20	41610051	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.15
20	41610099	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.15
20	41610122	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.24
20	41610128	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.318182
22	41627555	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.333333
22	41638598	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
22	41638664	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
22	41675489	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.125
22	41675490	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.176471
22	41675510	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.117647
22	41675518	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.153846
22	41675695	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.105263
22	41678072	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.166667
3	41873691	A->G	-	ENSG00000168038	ULK4	protein_coding	Intergenic	.	.	Alu	0.181818
3	41901655	A->G	-	ENSG00000168038	ULK4	protein_coding	Intergenic	.	.	Alu	0.2
3	41913358	A->G	-	ENSG00000168038	ULK4	protein_coding	Intergenic	.	.	Alu	0.333333
3	41918717	A->G	-	ENSG00000168038	ULK4	protein_coding	Intergenic	.	.	Alu	0.583333
22	41938117	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	42000379	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.263158
6	42000419	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	42000421	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
3	42019001	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.125
3	42019018	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.176471
8	42031768	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.125
6	42031901	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.111111
6	42031922	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	42031927	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.1875
6	42031928	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	42034589	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.3
6	42034610	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.352941
6	42034616	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.25
6	42034626	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42034683	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	42034715	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.153846
4	42053569	A->G	+	ENSG00000014824	SLC30A9	protein_coding	Intergenic	.	.	Alu	0.125
4	42053617	A->G	+	ENSG00000014824	SLC30A9	protein_coding	Intergenic	.	.	Alu	0.0909091
15	42170811	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.5
17	42244150	A->G	-	ENSG00000173757	STAT5B	protein_coding	Intergenic	.	.	Alu	0.272727
17	42244164	A->G	-	ENSG00000173757	STAT5B	protein_coding	Intergenic	.	.	Alu	0.333333
17	42244290	A->G	-	ENSG00000173757	STAT5B	protein_coding	Intergenic	.	.	Alu	0.272727
1	42328837	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.1875
8	42362923	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.142857
8	42362969	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.2
8	42363362	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.2
8	42363369	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.2
8	42363374	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.181818
8	42363381	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.153846
8	42363407	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.214286
8	42363424	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.142857
8	42363443	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.166667
8	42363460	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.125
8	42531825	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0625
8	42531826	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.242424
8	42531827	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0588235
8	42531854	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0555556
8	42531891	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.310345
8	42531895	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.107143
8	42531915	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42531924	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0588235
8	42531930	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	42531957	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.346154
8	42532022	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.136364
8	42532032	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42532100	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.185185
8	42532106	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.142857
8	42532108	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.148148
8	42532118	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	42533533	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.8
8	42533534	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.5
8	42533553	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42533581	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.142857
8	42533722	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42533756	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.611111
8	42533784	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.619048
8	42533797	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.217391
8	42533823	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
8	42533826	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	42533827	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	42533829	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0714286
8	42533832	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.12
8	42533841	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42533859	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.64
8	42533876	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.115385
8	42533887	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.275862
8	42533900	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0526316
8	42534053	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.117647
8	42534059	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1
8	42534082	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.25
8	42534105	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.333333
8	42534132	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.470588
8	42534134	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42534144	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.285714
8	42534151	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.538462
8	42534154	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
15	42550208	A->G	+	ENSG00000137814	HAUS2	protein_coding	Intergenic	.	.	Alu	0.2
22	42563009	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
22	42563011	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
22	42563081	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
22	42563084	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
22	42563098	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
22	42563116	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.190476
22	42563162	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
22	42563327	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
22	42563328	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
22	42563371	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
22	42563372	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
22	42563483	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
22	42563485	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
22	42564465	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
22	42564521	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
22	42564524	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
22	42564543	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.222222
22	42564569	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
22	42564570	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
3	42618293	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.7
3	42618296	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.3
15	42701915	A->G	+	ENSG00000159433	STARD9	protein_coding	Intergenic	.	.	Alu	0.2
10	42806614	A->G	+	ENSG00000165733	BMS1	protein_coding	Intergenic	.	.	Alu	0.166667
10	42806647	A->G	+	ENSG00000165733	BMS1	protein_coding	Intergenic	.	.	Alu	0.272727
21	42843471	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.266667
21	42843483	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.25
21	42843484	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.166667
21	42843526	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.0833333
21	42843532	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.0666667
6	42942320	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.153846
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.8
6	42942914	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.111111
6	42943140	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1875
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.111111
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
15	42953980	A->G	-	ENSG00000159459	UBR1	protein_coding	Intergenic	.	.	Alu	0.166667
22	42987735	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.5
22	42987763	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.285714
13	42988953	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.6
13	42989004	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.2
13	42989150	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.181818
5	42993057	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
5	42993058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
22	43009955	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.25
22	43010007	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.583333
22	43010008	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.130435
22	43010010	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.375
22	43010034	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.1
22	43010073	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.12
22	43010074	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.08
22	43010147	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	43010149	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.105263
5	43012526	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
5	43012536	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
6	43031285	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.166667
6	43031295	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43031637	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
5	43045702	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.2
5	43076789	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0909091
5	43128401	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0588235
5	43128402	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43128470	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43128472	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43128500	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.117647
5	43128502	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.125
5	43128510	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.133333
5	43128775	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.461538
5	43128850	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.208333
5	43128851	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43128880	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43128883	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43129051	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129074	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.3
5	43129188	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.4
5	43129706	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.117647
5	43130056	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.5
5	43130143	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.48
5	43130184	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.25
5	43130185	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.230769
5	43130190	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0769231
10	43141467	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.181818
8	43148861	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.117647
8	43152170	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.214286
8	43152173	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.142857
8	43152176	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.428571
8	43152211	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.285714
8	43152212	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.142857
2	43171549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
2	43171641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
2	43171739	A->G	-	.	.	.	Intergenic	.	.	Alu	0.391304
2	43173086	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
2	43173136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
2	43173140	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	43173171	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
2	43173222	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
2	43173289	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
2	43173290	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
2	43176183	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	43176186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
8	43177437	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.2
8	43177451	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.2
2	43195981	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
2	43195984	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	43230870	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.153846
17	43230887	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.25
15	43419630	A->G	-	ENSG00000067369	TP53BP1	protein_coding	Intergenic	.	.	Alu	0.181818
20	43467114	A->G	+	.	.	.	Intergenic	.	.	Alu	0.409091
20	43467166	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
20	43467227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
20	43467229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
20	43467306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
20	43467317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
20	43467395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
11	43473104	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.1
11	43473764	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.0869565
6	43615946	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.75
6	43616133	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.2
6	43616338	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	43616339	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.208333
6	43616395	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.111111
6	43616442	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.181818
6	43616468	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.148148
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.407407
6	43616474	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	43616509	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	43661353	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.333333
1	43661354	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.153846
1	43661359	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.714286
1	43661397	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.533333
1	43661472	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.133333
1	43661485	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.25
1	43661491	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.166667
1	43661495	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.166667
1	43661541	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	43760228	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.1875
15	43760270	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.466667
15	43760346	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.375
15	43761121	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.105263
11	43857591	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.2
2	44199075	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.3
2	44199111	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.2
2	44199137	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.238095
2	44222854	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.3
2	44223084	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1875
2	44223554	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.258065
2	44223631	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.4
2	44223632	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.388889
2	44223695	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.375
2	44223737	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.125
2	44223766	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.478261
11	44237969	A->G	+	ENSG00000151348	EXT2	protein_coding	Intergenic	.	.	Alu	0.636364
11	44237985	A->G	+	ENSG00000151348	EXT2	protein_coding	Intergenic	.	.	Alu	0.2
1	44431371	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.384615
1	44431376	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.230769
1	44431380	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44431409	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.466667
1	44431422	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44431433	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.25
1	44431447	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44434596	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.185185
1	44434637	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0952381
1	44434649	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.1
1	44434893	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.333333
1	44434896	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.103448
1	44434898	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0967742
1	44434904	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0689655
1	44434920	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0689655
1	44434952	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.103448
1	44434955	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0666667
1	44434960	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.24
1	44434961	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0769231
1	44434969	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.5
1	44435674	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.133333
1	44435675	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.285714
1	44435819	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
17	44445631	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.25
17	44445644	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
17	44445699	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.25
17	44445700	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.125
1	44463215	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.333333
1	44463270	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44475385	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44475803	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.130435
1	44475810	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44475811	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44475885	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0555556
1	44475905	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.178571
1	44475927	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
7	44477930	A->G	-	ENSG00000015676	NUDCD3	protein_coding	Intergenic	.	.	Alu	0.3
7	44477931	A->G	-	ENSG00000015676	NUDCD3	protein_coding	Intergenic	.	.	Alu	0.545455
1	44478508	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44480630	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.125
1	44480765	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44480787	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44480807	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.117647
1	44487115	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44487206	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44490214	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44490240	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.125
1	44490254	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44490363	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.294118
1	44490385	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.230769
1	44493938	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.5
1	44493951	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.5
1	44493952	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.461538
1	44493965	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.529412
1	44493997	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44494017	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0571429
1	44494030	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0588235
1	44494031	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.228571
1	44494036	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.1875
1	44494045	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44494046	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.117647
1	44494051	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0571429
1	44494054	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.133333
1	44494059	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0666667
1	44494086	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.133333
1	44495062	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0952381
1	44495066	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.1
1	44495092	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44495128	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44495616	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44495681	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44495696	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44495708	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44502931	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44503072	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44503214	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.125
1	44503246	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44503249	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.518519
1	44503255	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.32
15	44505691	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	44509760	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0526316
20	44515686	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.125
20	44515789	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.181818
20	44516485	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.5
20	44516527	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.272727
20	44516596	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.266667
15	44522092	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.214286
15	44522113	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.142857
1	44527556	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44527662	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.272727
1	44527664	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.818182
1	44527670	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.4
1	44527761	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.4
1	44527805	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44527811	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44527815	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.269231
1	44527859	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.08
1	44527883	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.6875
1	44529527	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44529573	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.6
1	44529872	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.7
1	44529873	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.4
15	44549610	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.105263
15	44549646	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.0833333
15	44549647	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.0833333
15	44567097	A->G	+	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.4
7	44576832	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	44577058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	44577059	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
15	44601439	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.125
15	44601440	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.133333
15	44601455	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.125
15	44601533	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.08
15	44601650	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.133333
15	44601674	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.2
15	44601682	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.666667
15	44601707	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.277778
15	44601726	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.0869565
15	44601729	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.0909091
15	44601735	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.842105
15	44601801	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.230769
15	44601809	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.181818
15	44602617	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.153846
15	44602627	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.142857
7	44803323	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.272727
7	44803340	A->G	-	ENSG00000196262	PPIA	protein_coding	Intergenic	.	.	Alu	0.2
7	44832684	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0465116
7	44832686	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0731707
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.636364
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.9
7	44832822	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.263158
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.647059
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.538462
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.277778
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.45
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.12
7	44833145	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0882353
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.193548
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.09375
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.9
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.583333
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.230769
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.4
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44833578	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.15
7	44834875	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0294118
7	44834894	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0327869
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.191489
7	44836235	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44838082	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.526316
17	44867357	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.117647
17	44874126	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.3
17	44874134	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.272727
X	44883853	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.153846
X	44883952	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.210526
X	44883955	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.222222
X	44883981	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.176471
X	44883982	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.294118
X	44884016	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.15
X	44884023	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44884062	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44964328	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
19	45012582	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45012584	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45012585	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
14	45037772	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	1
14	45037773	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.846154
7	45059489	A->G	+	ENSG00000136280	CCM2	protein_coding	Intergenic	.	.	Alu	0.3
19	45065259	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.235294
19	45065332	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.166667
17	45065467	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.181818
17	45065509	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.166667
19	45066609	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.363636
17	45153301	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.2
17	45153333	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.142857
17	45153342	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.133333
17	45153436	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.428571
17	45153480	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.3
17	45153578	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.263158
17	45153593	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.15
17	45153629	A->G	-	ENSG00000224505	AC138150.1	antisense	Intergenic	.	.	Alu	0.176471
14	45208533	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.3
14	45208604	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.4
14	45208605	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.6
17	45217625	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.142857
17	45217630	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.357143
17	45217631	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.142857
17	45217635	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.125
17	45217665	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.25
17	45217764	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.133333
17	45217805	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.285714
17	45217844	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.125
17	45218005	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.5
17	45218009	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.4
17	45218075	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.166667
17	45218236	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.176471
22	45353151	A->G	+	ENSG00000077935	SMC1B	protein_coding	Intergenic	.	.	Alu	0.142857
10	45487090	A->G	-	ENSG00000165406	8-Mar	protein_coding	Intergenic	.	.	Alu	0.5
17	45505641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	45505642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	45506636	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	45506728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0434783
1	45646762	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.117647
1	45648121	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
1	45653316	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
1	45653917	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45653918	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45653954	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.416667
1	45656794	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45671307	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45671330	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.4
1	45680281	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.133333
1	45680341	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45683291	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.142857
1	45683314	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45683354	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
19	45695207	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.2
X	45847335	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
12	45867801	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.4
12	45898839	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45898842	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45898869	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.142857
12	45899063	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.214286
12	45899151	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.25
12	45899161	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.142857
12	45899165	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.166667
12	45899217	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.142857
12	45936175	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.277778
12	45936176	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.210526
12	45936227	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.363636
12	45936250	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.3
12	45936319	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.166667
12	45936320	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.166667
12	45936321	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.25
12	45936324	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.2
12	45954635	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	45954654	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.130435
12	45954662	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.133333
12	45954668	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0425532
10	45994169	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.153846
10	45994218	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.166667
10	45994219	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.166667
10	45994289	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.4
17	46148719	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.166667
17	46148723	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.384615
21	46271363	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.272727
1	46294246	A->G	-	ENSG00000132128	LRRC41	protein_coding	Intergenic	.	.	Alu	0.25
1	46294394	A->G	-	ENSG00000132128	LRRC41	protein_coding	Intergenic	.	.	Alu	0.181818
21	46461177	A->G	+	ENSG00000160305	DIP2A	protein_coding	Intergenic	.	.	Alu	0.307692
2	46578635	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.25
2	46578676	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.1875
2	46578681	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.181818
X	46619801	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.166667
X	46619830	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.75
X	46655217	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.153846
16	46655640	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	46706990	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.214286
19	46708478	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.181818
19	46708511	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.181818
19	46708533	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.153846
19	46709245	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.166667
19	46709246	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.1
19	46709262	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.230769
17	47007322	A->G	-	ENSG00000263142	LRRC37A17P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
11	47053459	A->G	+	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.272727
3	47160438	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.25
3	47160449	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.2
20	47288499	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.285714
20	47288502	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.16
20	47288531	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.208333
20	47288558	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.238095
20	47288564	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.208333
20	47288565	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.12
20	47288572	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.15
20	47288587	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.15
20	47288595	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.214286
20	47288630	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.138889
20	47288660	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.162162
20	47288662	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.189189
20	47288857	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.176471
1	47299504	A->G	-	ENSG00000123473	STIL	protein_coding	Intergenic	.	.	Alu	0.4
1	47299531	A->G	-	ENSG00000123473	STIL	protein_coding	Intergenic	.	.	Alu	0.166667
16	47301535	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.153846
16	47301560	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.25
16	47301595	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.25
16	47301599	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.461538
16	47301600	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.153846
16	47301669	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.25
8	47352127	A->G	+	ENSG00000164808	SPIDR	protein_coding	Intergenic	.	.	Alu	0.2
11	47367960	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.230769
2	47405235	A->G	+	ENSG00000095002	MSH2	protein_coding	Intergenic	.	.	Alu	0.133333
2	47405275	A->G	+	ENSG00000095002	MSH2	protein_coding	Intergenic	.	.	Alu	0.4
7	47413158	A->G	-	ENSG00000136205	TNS3	protein_coding	Intergenic	.	.	Alu	0.416667
7	47413180	A->G	-	ENSG00000136205	TNS3	protein_coding	Intergenic	.	.	Alu	0.214286
17	47439241	A->G	-	ENSG00000178852	EFCAB13	protein_coding	Intergenic	.	.	Alu	0.111111
11	47480264	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.296296
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.222222
11	47480879	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.24
11	47480924	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.148148
11	47480956	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47480957	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47480967	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
11	47480969	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47481147	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.210526
11	47481265	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47481266	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.130435
11	47481292	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.16
11	47481295	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0769231
11	47481300	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0689655
11	47481362	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.263158
11	47490195	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47534177	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47537345	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47542552	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47542560	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	47542569	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47542595	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.111111
11	47542630	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47542748	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
3	47604791	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.181818
3	47604855	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.2
11	47616887	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
3	47708279	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.272727
3	47708305	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.133333
3	47722426	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.133333
3	47727997	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.3
3	47728042	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.117647
3	47728154	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.166667
3	47728155	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.166667
3	47728270	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.1
3	47728281	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.111111
3	47728290	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.222222
3	47728291	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	47785922	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.5
8	47785923	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.3
8	47786826	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.153846
8	47786907	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.217391
8	47786909	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.26087
8	47786912	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.136364
8	47786999	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.181818
8	47787000	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.181818
2	47793374	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.181818
2	47793375	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.181818
2	47793451	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.166667
2	47793526	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.538462
2	47793527	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.133333
2	47825721	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47878425	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.105263
2	47878485	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
2	47878489	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.333333
2	47878576	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.176471
2	47878641	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47878651	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.136364
2	47878732	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.4
2	47878734	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47878879	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3125
4	48141748	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.1
4	48141772	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0625
4	48141778	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0666667
4	48141785	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.560976
4	48141788	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0540541
4	48141811	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0952381
4	48141820	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.682927
4	48141821	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.153846
4	48141878	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.382353
4	48141886	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.741935
4	48141891	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0666667
4	48141900	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.322581
4	48141917	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0909091
4	48141926	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0540541
4	48142352	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.411765
4	48142435	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.4
4	48142469	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.2
19	48218483	A->G	-	ENSG00000105483	CARD8	protein_coding	Intergenic	.	.	Alu	0.125
19	48218626	A->G	-	ENSG00000105483	CARD8	protein_coding	Intergenic	.	.	Alu	0.181818
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.2
19	48328971	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.166667
10	48356584	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.285714
10	48356586	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.266667
10	48356633	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.117647
10	48356695	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.173913
10	48356705	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.12
10	48356706	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.12
10	48356722	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.142857
19	48458527	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.2
19	48458549	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.384615
19	48458590	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.153846
19	48459121	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.3
19	48459507	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.357143
19	48459513	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.285714
19	48459995	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.230769
2	48494002	A->G	+	ENSG00000162869	PPP1R21	protein_coding	Intergenic	.	.	Alu	0.25
X	48580420	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.166667
X	48580428	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.166667
X	48580583	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.4
X	48580591	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.4
X	48580668	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.230769
X	48580686	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.117647
12	48664043	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	48664092	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	48664108	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	48664205	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.285714
12	48664718	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0882353
12	48664787	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.26087
12	48664788	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48697363	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48697423	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.08
3	48697426	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0740741
12	48701354	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.2
12	48705505	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.166667
17	48858604	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intergenic	.	.	Alu	0.2
17	48858898	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intergenic	.	.	Alu	0.230769
17	48858925	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intergenic	.	.	Alu	0.142857
17	48866652	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	48866856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
17	48866922	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	48866923	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
17	48866933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
17	48866989	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
17	48867140	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48867176	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	48867272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	48867276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
17	48867453	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
17	48867475	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
17	48867542	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	48867906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
12	48928294	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.2
12	48928300	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.2
3	48939570	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48939574	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
13	48990641	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.125
13	48990682	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.125
13	48991432	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.181818
13	48991559	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.117647
3	49010151	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.2
13	49060468	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.2
3	49069637	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.3
3	49069699	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49069703	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49088777	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49089319	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.363636
20	49163488	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.25
20	49163499	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.214286
20	49163603	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.3
3	49321545	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49321596	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.375
3	49321605	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1875
3	49321606	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.6875
3	49321632	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	1
3	49321657	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.4
17	49336723	A->G	-	ENSG00000198740	ZNF652	protein_coding	Intergenic	.	.	Alu	0.4
17	49336741	A->G	-	ENSG00000198740	ZNF652	protein_coding	Intergenic	.	.	Alu	0.2
17	49336751	A->G	-	ENSG00000198740	ZNF652	protein_coding	Intergenic	.	.	Alu	0.4
17	49339244	A->G	-	ENSG00000198740	ZNF652	protein_coding	Intergenic	.	.	Alu	0.416667
17	49339255	A->G	-	ENSG00000198740	ZNF652	protein_coding	Intergenic	.	.	Alu	0.272727
3	49368819	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.666667
3	49368824	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.230769
3	49368846	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.230769
3	49407330	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.142857
3	49407331	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0833333
3	49407371	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	1
3	49407374	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	1
3	49407414	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.15625
3	49407417	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.178571
3	49407429	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.12
22	49473881	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.181818
22	49486795	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.545455
22	49487010	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.3
22	49487039	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.666667
22	49487042	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.25
22	49487062	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.625
22	49487071	A->G	-	ENSG00000188511	C22orf34	lincRNA	Intergenic	.	.	Alu	0.266667
17	49606654	A->G	-	ENSG00000121067	SPOP	protein_coding	Intergenic	.	.	Alu	0.5
17	49606658	A->G	-	ENSG00000121067	SPOP	protein_coding	Intergenic	.	.	Alu	0.181818
14	49632610	A->G	-	ENSG00000165506	DNAAF2	protein_coding	Intergenic	.	.	Alu	0.111111
14	49646387	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.153846
14	49646413	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.333333
14	49646414	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.181818
14	49646530	A->G	-	ENSG00000100479	POLE2	protein_coding	Intergenic	.	.	Alu	0.117647
13	49788643	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.2
14	49820019	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.157895
14	49820020	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.157895
14	49838677	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.157895
14	49838749	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.166667
14	49839215	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.117647
14	49839285	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.166667
20	49939890	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.4
20	49939957	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.5
10	49963801	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.157895
10	49966655	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.1
10	49966689	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.153846
10	49966691	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.461538
10	49966705	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.3
13	50008832	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.111111
13	50008882	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.130435
13	50008954	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.416667
13	50008985	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.133333
3	50026786	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.307692
3	50026792	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.615385
3	50026810	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.142857
3	50026847	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.181818
3	50026856	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.25
3	50032363	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.230769
3	50032369	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.153846
3	50032810	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.142857
3	50032910	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.25
3	50032917	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.153846
3	50032935	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.214286
3	50032968	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.111111
3	50038646	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.3
3	50038690	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.181818
3	50038706	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.142857
3	50038712	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.230769
3	50038726	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.153846
13	50039131	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0909091
13	50039258	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.117647
13	50039704	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.157895
13	50039724	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.1875
13	50039910	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.157895
13	50047394	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.777778
13	50047609	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0652174
13	50047610	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0425532
3	50099134	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.363636
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.416667
3	50111564	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1875
3	50111636	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50112155	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50112217	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.115385
3	50112221	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.173913
3	50112265	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.08
3	50112269	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.272727
3	50112273	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.5
3	50112305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0571429
3	50112322	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0555556
3	50112337	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0555556
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.628571
3	50112361	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.25
13	50118674	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.08
13	50118744	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.166667
13	50118814	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.142857
13	50118866	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.111111
3	50119578	A->G	+	ENSG00000235016	SEMA3F-AS1	antisense	Intergenic	.	.	Alu	0.153846
12	50153376	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.181818
12	50153408	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50153418	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.153846
12	50153448	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50153453	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.3
12	50153481	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.363636
12	50153483	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.230769
12	50153512	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50162007	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.307692
12	50162143	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50162148	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.363636
12	50164239	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
14	50197749	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.227273
14	50197826	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.117647
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.176471
14	50197899	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.6875
14	50197962	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.214286
15	50324641	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50332121	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.384615
15	50332147	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
3	50335086	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	50335518	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0555556
3	50335744	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.111111
3	50335878	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.153846
15	50346887	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	50346944	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	50346978	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	50374761	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.153846
22	50374793	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.117647
22	50374807	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.5
22	50396099	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.2
22	50396102	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.4
5	50413648	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.2
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.538462
5	50413672	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.3
12	50459989	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.181818
15	50494878	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.3
15	50582208	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.3
20	50588920	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	1
20	50588961	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	1
15	50619356	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.166667
15	50619359	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.416667
1	50642989	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.2
1	50643049	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.2
1	50663609	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.2
17	50727997	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.12
17	50728059	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.125
17	50730115	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.411765
17	50730117	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.764706
17	50730138	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.352941
17	50730371	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50730400	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.25
17	50730401	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.6
17	50730450	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.409091
17	50730464	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.4
17	50730465	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.1875
17	50730471	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0689655
17	50730855	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50734976	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50735110	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50757607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	50803964	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.181818
14	50803965	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.363636
14	50804101	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.230769
20	50907035	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0909091
20	50907036	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0833333
20	50907106	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.416667
20	50907163	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.142857
20	50922640	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0869565
20	50922704	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.08
20	50922718	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0952381
13	50939236	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.208333
13	50939242	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.0833333
13	50939399	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.357143
13	50939435	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.222222
1	50957424	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.2
17	50991792	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	50991797	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3
17	50992087	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.363636
17	50998143	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0952381
17	50998196	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.210526
17	50998210	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.266667
17	50998211	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.230769
17	50998214	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	50998220	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.6
17	51026729	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	1
12	51157749	A->G	-	ENSG00000135457	TFCP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	51469355	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.272727
3	51469423	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.272727
3	51484847	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	51633670	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.636364
13	51713631	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.2
15	51864163	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	51866377	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.5
15	51866378	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.2
15	51866402	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.230769
15	51916974	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	51916987	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.0689655
15	51917374	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.117647
15	51934527	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	51934999	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.166667
15	51945202	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.3
1	52040071	A->G	-	ENSG00000117862	TXNDC12	protein_coding	Intergenic	.	.	Alu	0.181818
1	52079262	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.3
1	52092008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	52092012	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
1	52092056	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	52092057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	52193750	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.8
19	52193770	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.583333
19	52193857	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.272727
19	52193910	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.5
19	52193998	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.142857
19	52194033	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.1875
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.9375
15	52230930	A->G	-	ENSG00000128833	MYO5C	protein_coding	Intergenic	.	.	Alu	0.125
15	52230949	A->G	-	ENSG00000128833	MYO5C	protein_coding	Intergenic	.	.	Alu	0.125
15	52230965	A->G	-	ENSG00000128833	MYO5C	protein_coding	Intergenic	.	.	Alu	0.25
15	52241398	A->G	-	ENSG00000128833	MYO5C	protein_coding	Intergenic	.	.	Alu	0.4
19	52271784	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.214286
19	52271789	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.307692
19	52271813	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.214286
19	52298462	A->G	+	ENSG00000198464	ZNF480	protein_coding	Intergenic	.	.	Alu	0.1875
15	52382079	A->G	-	ENSG00000197535	MYO5A	protein_coding	Intergenic	.	.	Alu	0.2
3	52414951	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.222222
3	52414953	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.555556
3	52414959	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.222222
3	52415245	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.777778
3	52415252	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.375
3	52415277	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.285714
3	52415297	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.3
3	52415314	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.25
1	52441380	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.529412
1	52441381	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.105263
1	52441390	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.263158
1	52441415	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.111111
1	52441565	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.272727
1	52441566	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.454545
1	52471221	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.2
1	52531999	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.166667
1	52532016	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.3
3	52591644	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.133333
3	52591708	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.153846
3	52592280	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.272727
3	52592292	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.25
19	52639235	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.111111
19	52639251	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.214286
19	52639358	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52639503	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.454545
19	52639510	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.181818
19	52639549	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.357143
19	52639555	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.571429
19	52639588	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.0952381
19	52639617	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.6
19	52639636	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.294118
19	52642500	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.375
19	52647481	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.1875
19	52647527	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52647541	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.117647
19	52647549	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52647554	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.142857
8	52698514	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	52698533	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	52698796	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0344828
8	52698828	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0357143
8	52698838	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0697674
8	52698854	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.208333
8	52698862	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0517241
8	52698865	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0377358
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.282051
8	52698918	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.482759
8	52701261	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	52701648	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52706855	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.333333
8	52706857	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.722222
8	52706889	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.473684
14	52714633	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.1875
14	52714637	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.214286
14	52714642	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.785714
14	52714645	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.142857
19	52723353	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.8
19	52723382	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.363636
19	52726353	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.545455
19	52925327	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.0909091
19	52926605	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.625
19	52926606	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.1875
19	52926660	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52926661	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52926886	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52926926	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.0909091
19	52926991	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.307692
19	52927034	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.166667
19	52939444	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.272727
19	52939480	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.363636
19	52939664	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
19	52939722	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
19	52939778	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.176471
19	52939792	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.111111
19	52940985	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.117647
19	52940987	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.111111
19	52941024	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
19	52941054	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.142857
19	52941063	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1875
19	52941200	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.25
19	52941214	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1
3	53253400	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.5
6	53320079	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.181818
6	53320474	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.692308
6	53320503	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.25
6	53320505	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.214286
6	53320507	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53330636	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
3	53333239	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.166667
3	53333278	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53333279	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53333305	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.214286
3	53333347	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.3125
3	53333349	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.1875
4	53419605	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
4	53419606	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.25
4	53419898	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
4	53420030	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.230769
4	53420285	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.125
4	53420298	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.15
4	53420312	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.115385
5	53563135	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.7
5	53605893	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	1
5	53605899	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	1
2	53789193	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.153846
2	53790163	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.368421
19	53872607	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.2
19	53873108	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0833333
19	53873114	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.12
2	53965291	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.533333
2	53965327	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.6
2	53965346	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53965357	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
8	53993015	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.230769
8	53993038	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.117647
8	53993091	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.153846
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.294118
5	54014649	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.166667
5	54014658	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.166667
5	54014659	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.545455
5	54058170	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.5
5	54058173	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.272727
5	54058174	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.363636
5	54058175	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.363636
5	54058176	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.272727
19	54175140	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.08
19	54175688	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.153846
19	54177434	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.214286
19	54177570	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.142857
19	54177687	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.1875
19	54177714	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.105263
19	54177741	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.111111
19	54177753	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.08
19	54177864	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.0857143
19	54178191	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.235294
19	54178196	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.315789
19	54184318	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.153846
X	54562226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54562229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54562252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54562268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54562672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
X	54562686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54562699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.75
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.380952
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54563506	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.411765
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5625
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54563633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54563634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54563639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54563675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54564488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54564500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
X	54564507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54564508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
X	54564525	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54564605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54564617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54564863	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54564873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54564914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
X	54564944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	54564971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	54564972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54564978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
X	54564982	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	54565009	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
X	54565015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
1	54639290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
1	54639300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	54639301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
1	54639316	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
1	54639329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
1	54639349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
14	55058678	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.133333
14	55059383	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.105263
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.538462
14	55278780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.4
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.357143
14	55278870	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55278877	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.533333
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.7
14	55279093	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.05
14	55279112	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0810811
14	55279122	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0444444
14	55279128	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55279137	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0512821
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.666667
14	55279148	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0645161
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.307692
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.108108
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.366667
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.636364
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.3
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.666667
14	55281219	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
15	55287123	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.454545
14	55305549	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55305575	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
2	55307913	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.0833333
4	55401861	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.153846
4	55412175	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0588235
4	55412229	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	1
4	55412234	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0645161
4	55412235	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	1
4	55412242	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.115385
4	55412243	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.269231
4	55412244	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0769231
4	55412274	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.189189
4	55412279	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0555556
4	55412287	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0769231
4	55412290	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.125
4	55412296	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.1
4	55412300	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.4
4	55412314	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.117647
4	55412315	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.133333
4	55419976	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.166667
5	55433047	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	55433054	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.529412
5	55433059	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	55433084	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.125
5	55433099	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.125
5	55433220	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.176471
5	55433225	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	55433245	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.214286
5	55433749	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.2
5	55433757	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.2
5	55433758	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.6
5	55433759	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.6
5	55433975	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.2
5	55433990	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	55434025	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.5
5	55434054	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.4
5	55434074	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	55434086	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.272727
18	55531063	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.0769231
18	55531096	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.190476
18	55531147	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.15
18	55531148	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.227273
18	55531149	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.136364
18	55531210	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.263158
2	55573991	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.047619
2	55591215	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.25
19	55637422	A->G	+	ENSG00000213015	ZNF580	protein_coding	Intergenic	.	.	Alu	0.230769
19	55638734	A->G	+	ENSG00000213015	ZNF580	protein_coding	Intergenic	.	.	Alu	0.2
19	55638760	A->G	+	ENSG00000213015	ZNF580	protein_coding	Intergenic	.	.	Alu	0.6
12	55787574	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.285714
12	55787575	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.285714
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55890063	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55890067	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55890237	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
7	55892631	A->G	+	ENSG00000249773	AC092647.5	protein_coding	Intergenic	.	.	Alu	0.214286
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.411765
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.210526
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
4	55961503	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.25
4	55961594	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.214286
4	55961600	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.125
4	55961603	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.235294
4	55961604	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.235294
4	55961605	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.133333
4	55961607	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.133333
4	55961644	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.142857
4	55961670	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.153846
4	55961719	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.181818
4	55962180	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.181818
4	55962239	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.3
4	55962347	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.333333
4	55962370	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.315789
4	55962374	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.0952381
7	55985869	A->G	+	ENSG00000146729	NIPSNAP2	protein_coding	Intergenic	.	.	Alu	0.166667
7	56010631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	56047056	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	56068901	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0967742
8	56068904	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0645161
8	56068907	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.121212
8	56068914	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.69697
8	56068920	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0625
8	56068927	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.138889
8	56068968	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.111111
8	56068973	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.305556
8	56068974	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0540541
8	56068976	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.111111
8	56068991	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.424242
8	56069001	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.116279
8	56069002	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0465116
8	56069025	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.125
8	56069030	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.130435
8	56069255	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.166667
8	56069271	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.263158
8	56069384	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.142857
8	56069395	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.125
8	56069436	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.214286
7	56096949	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	56098721	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	56098781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
7	56098817	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	56098873	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	56098922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
7	56099162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
7	56099215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
7	56099255	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
7	56099335	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
7	56099416	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
12	56136470	A->G	+	ENSG00000139641	ESYT1	protein_coding	Intergenic	.	.	Alu	0.2
12	56136532	A->G	+	ENSG00000139641	ESYT1	protein_coding	Intergenic	.	.	Alu	0.125
12	56136540	A->G	+	ENSG00000139641	ESYT1	protein_coding	Intergenic	.	.	Alu	0.266667
12	56303302	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.5
12	56312018	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56312501	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56313247	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.3
12	56313299	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.6
12	56313433	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.818182
12	56313443	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.6
12	56313682	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56313711	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.133333
12	56313731	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.0740741
12	56313739	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.136364
12	56313745	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	1
12	56314104	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.2
12	56314244	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.125
12	56314309	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56353046	A->G	-	ENSG00000170581	STAT2	protein_coding	Intergenic	.	.	Alu	0.454545
12	56353177	A->G	-	ENSG00000170581	STAT2	protein_coding	Intergenic	.	.	Alu	0.5
12	56353178	A->G	-	ENSG00000170581	STAT2	protein_coding	Intergenic	.	.	Alu	0.272727
4	56473714	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.153846
4	56473715	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.153846
18	56611799	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.125
18	56611818	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.166667
18	56611843	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.153846
18	56611973	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1875
18	56611987	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1875
12	56730535	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.2
12	56730573	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.5
12	56730574	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.181818
12	56730641	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.272727
12	56730642	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.3
12	56731292	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0689655
12	56731348	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0952381
12	56731351	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.454545
12	56731355	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4375
12	56731364	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0952381
12	56731396	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.75
12	56731397	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.291667
12	56731436	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.2
12	56731437	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.190476
12	56731462	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.166667
12	56731463	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.230769
4	56925009	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.153846
4	56925018	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.166667
4	56940023	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.166667
15	56998326	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.3
15	56998407	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.153846
12	57068043	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.272727
12	57068044	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.181818
12	57068052	A->G	-	ENSG00000166881	NEMP1	protein_coding	Intergenic	.	.	Alu	0.4
15	57098110	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.0869565
15	57124067	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.181818
15	57173014	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.142857
15	57185701	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.466667
15	57186939	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.25
15	57187060	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.285714
15	57187061	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.642857
15	57187810	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.1
19	57246696	A->G	+	ENSG00000204524	ZNF805	protein_coding	Intergenic	.	.	Alu	0.2
17	57304104	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.4
17	57304192	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.272727
17	57304196	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.363636
17	57304246	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
12	57322130	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	57335368	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.153846
12	57335385	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.111111
12	57335401	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.125
12	57335409	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.111111
12	57335411	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	57335412	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.111111
17	57409754	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0377358
17	57409821	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.12
17	57409845	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.131579
17	57409846	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.1
17	57409848	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0487805
17	57409851	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0487805
17	57409858	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0731707
17	57409861	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.228571
17	57409887	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0731707
17	57409888	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.136364
17	57409914	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.285714
17	57409929	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.209302
17	57409949	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	57409968	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.263158
17	57411227	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
17	57411259	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.15
17	57411269	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.117647
12	57419241	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	57419252	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.3
12	57421241	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.625
12	57421249	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	57421263	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.294118
12	57421267	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.125
12	57421289	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.285714
12	57421290	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	57421298	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	57421343	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.2
17	57427304	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	57427318	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.15
17	57427319	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.15
17	57444469	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	57450555	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0263158
17	57450592	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.23913
17	57450610	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0612245
17	57450626	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.192308
17	57457617	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.5
17	57457640	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.4
17	57459982	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
17	57460203	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.103448
17	57460213	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0555556
17	57460221	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0697674
17	57460239	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0930233
12	57484103	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	Intergenic	.	.	Alu	0.3125
17	57495386	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57500749	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.105263
17	57504766	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.125
17	57504769	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57504793	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.388889
17	57504820	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.178571
17	57504824	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0666667
17	57504837	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.111111
17	57526150	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.3
17	57526175	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.214286
17	57591565	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.125
6	57627161	A->G	+	ENSG00000146143	PRIM2	protein_coding	Intergenic	.	.	Alu	0.416667
17	57647167	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	57647393	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.6875
17	57647394	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.515152
17	57647414	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0789474
17	57647426	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0740741
3	57676961	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
3	57677533	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.117647
3	57677574	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.214286
3	57677682	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.217391
3	57677720	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
18	57680366	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.117647
18	57680385	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.181818
18	57680438	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.166667
18	57738360	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.3
11	57748452	A->G	+	ENSG00000233436	BTBD18	protein_coding	Intergenic	.	.	Alu	0.181818
11	57748468	A->G	+	ENSG00000233436	BTBD18	protein_coding	Intergenic	.	.	Alu	0.384615
11	57770491	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.117647
11	57770522	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.4375
11	57770532	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.157895
11	57770546	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.105263
11	57770559	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.1
11	57770565	A->G	+	ENSG00000254462	TMX2-CTNND1	protein_coding	Intergenic	.	.	Alu	0.111111
3	57775566	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.25
3	57775609	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.181818
3	57775635	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.333333
19	57811908	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.142857
19	57812094	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.2
19	57812121	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.230769
19	57812126	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.272727
19	57812186	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.2
19	57852656	A->G	-	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	57853056	A->G	-	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	57853098	A->G	-	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	57866787	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.111111
19	57866788	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.105263
19	57866806	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.0869565
19	57866807	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.136364
19	57866820	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.105263
19	57866917	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.222222
19	57866918	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.5
19	57866969	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.181818
19	57866978	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.105263
19	57866981	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.444444
19	57871907	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57900985	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.133333
10	58216881	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.266667
10	58216894	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.384615
10	58216919	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.181818
10	58216956	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.166667
10	58216959	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.444444
10	58216966	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.2
10	58217031	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.263158
10	58217121	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.142857
10	58217122	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.142857
10	58217128	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.222222
14	58261320	A->G	-	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.125
19	58264513	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
19	58264531	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
19	58265998	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
19	58266034	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.133333
19	58266085	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.307692
19	58266086	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.307692
19	58269801	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.454545
19	58272928	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.157895
19	58272929	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.105263
19	58275607	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.181818
14	58277084	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.136364
14	58277309	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.166667
14	58277374	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.384615
19	58314369	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.181818
19	58314500	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.333333
19	58314506	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.8
19	58314520	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.133333
17	58340501	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58340507	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.266667
17	58340523	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.34375
17	58340546	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0645161
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.323529
17	58340588	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.151515
17	58340739	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	58340761	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.52
17	58340886	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58340895	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.272727
17	58340917	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.142857
17	58340952	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.1
17	58341382	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.363636
17	58341426	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58341429	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.133333
17	58341681	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.529412
17	58341722	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0512821
17	58341727	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0952381
17	58341750	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0444444
17	58341758	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0731707
17	58341780	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0540541
17	58341782	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0810811
17	58341783	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.282051
17	58341785	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0555556
17	58341786	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.222222
17	58341789	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.111111
17	58341815	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.577778
17	58341830	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.205128
17	58341861	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.391304
17	58341891	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.285714
17	58346519	A->G	+	ENSG00000213246	SUPT4H1	protein_coding	Intergenic	.	.	Alu	0.166667
17	58346520	A->G	+	ENSG00000213246	SUPT4H1	protein_coding	Intergenic	.	.	Alu	0.166667
17	58346596	A->G	+	ENSG00000213246	SUPT4H1	protein_coding	Intergenic	.	.	Alu	0.111111
17	58346602	A->G	+	ENSG00000213246	SUPT4H1	protein_coding	Intergenic	.	.	Alu	0.25
17	58346619	A->G	+	ENSG00000213246	SUPT4H1	protein_coding	Intergenic	.	.	Alu	0.15
19	58564983	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.130435
19	58565006	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	58565041	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.08
19	58565045	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	1
20	58684010	A->G	+	ENSG00000254995	STX16-NPEPL1	protein_coding	Intergenic	.	.	Alu	0.692308
18	58702263	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.214286
17	59203256	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.230769
17	59203390	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.6
17	59203405	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.2
17	59203408	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.857143
17	59203409	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.785714
17	59203410	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.5
17	59203434	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.307692
17	59204907	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.0625
17	59274657	A->G	+	ENSG00000153982	GDPD1	protein_coding	Intergenic	.	.	Alu	0.5
17	59274663	A->G	+	ENSG00000153982	GDPD1	protein_coding	Intergenic	.	.	Alu	0.25
11	59583752	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.166667
11	59583843	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.166667
15	59676298	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0833333
15	59676312	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0833333
13	59762174	A->G	-	ENSG00000139734	DIAPH3	protein_coding	Intergenic	.	.	Alu	0.166667
10	59902531	A->G	-	ENSG00000108091	CCDC6	protein_coding	Intergenic	.	.	Alu	0.2
10	59902532	A->G	-	ENSG00000108091	CCDC6	protein_coding	Intergenic	.	.	Alu	0.2
3	60066825	A->G	-	ENSG00000189283	FHIT	protein_coding	Intergenic	.	.	Alu	0.2
14	60099938	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.181818
14	60099985	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.25
14	60099990	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.416667
17	60507399	A->G	-	ENSG00000062725	APPBP2	protein_coding	Intergenic	.	.	Alu	0.3
17	60519876	A->G	-	ENSG00000062725	APPBP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	60866956	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
5	60866983	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
2	61196031	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.214286
2	61196213	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.111111
2	61196497	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.1875
2	61196629	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.181818
2	61196655	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.153846
2	61196670	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.142857
2	61235464	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.181818
2	61269293	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.1875
2	61269301	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.153846
11	61320991	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61359896	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.125
2	61359984	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.272727
5	61378649	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.727273
5	61378695	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.571429
5	61378697	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.428571
5	61378830	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.3
5	61378916	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61378938	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.243243
5	61378952	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.135135
5	61379031	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.12
5	61379034	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.238095
5	61379058	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.6875
5	61379060	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.3125
5	61379106	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.392857
5	61379113	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.3
5	61379122	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.2
5	61379172	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.25
5	61382755	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.1
2	61502857	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61502879	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	61503051	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61503176	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61503243	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61511973	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61512002	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61528023	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.5
2	61528024	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.230769
2	61528038	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.136364
2	61528055	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	61528065	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	61528109	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.16
2	61528126	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.12
2	61528162	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.148148
2	61528171	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	61697471	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.133333
14	61742631	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.130435
14	61742676	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.1
14	61742677	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.15
14	61742700	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.1
14	61742753	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0588235
14	61743254	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.166667
15	61861145	A->G	-	ENSG00000129003	VPS13C	protein_coding	Intergenic	.	.	Alu	0.111111
15	61861151	A->G	-	ENSG00000129003	VPS13C	protein_coding	Intergenic	.	.	Alu	0.125
15	61861156	A->G	-	ENSG00000129003	VPS13C	protein_coding	Intergenic	.	.	Alu	0.25
2	61882070	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.1
2	61882071	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	61882101	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	61882108	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.105263
2	61884785	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.454545
17	61998660	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0857143
17	61998697	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.208333
17	61998724	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.487179
17	61998738	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0465116
17	61998744	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0487805
17	61998798	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.222222
17	61998815	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0909091
17	61998818	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.115385
17	61998880	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.210526
17	61998885	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.222222
2	62165471	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
5	62323136	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.125
5	62323402	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.0909091
12	62330478	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0769231
12	62330507	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.125
12	62330511	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.12
12	62330787	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.15
12	62332018	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.176471
12	62332043	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.235294
17	62451659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
5	62518279	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.2
17	62518457	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62518585	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.5
11	62619629	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.125
11	62619639	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.117647
11	62619660	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.157895
11	62619669	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.294118
11	62619670	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.294118
11	62739071	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.2
11	62820783	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62822357	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62823204	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62823205	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.111111
11	62823272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.352941
11	62823273	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.473684
11	62823347	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.111111
11	62823353	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.111111
11	62823356	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.375
11	62823362	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.176471
11	62823375	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62887588	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.388889
11	62887623	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.153846
11	62887624	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.153846
11	62887647	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.538462
11	62887653	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.5625
11	62887684	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.285714
2	62921324	A->G	+	ENSG00000115504	EHBP1	protein_coding	Intergenic	.	.	Alu	0.4
2	62956657	A->G	+	ENSG00000115504	EHBP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	63196307	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.4
18	63211337	A->G	-	ENSG00000171791	BCL2	protein_coding	Intergenic	.	.	Alu	0.583333
10	63281272	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63472395	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.3
10	63493446	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63493450	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
20	63526945	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
15	63545736	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.25
15	63545785	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0952381
15	63545793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.333333
15	63545795	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.210526
15	63545824	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0645161
15	63545832	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0689655
15	63545850	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.7
15	63545896	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.454545
15	63547458	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	63547474	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	63547491	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.263158
15	63547497	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.285714
15	63547609	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.08
15	63547655	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.25
15	63547923	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63547979	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	63547990	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.09375
15	63547996	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0810811
15	63547997	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0588235
15	63548026	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.12
15	63548031	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.736842
12	63588850	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.166667
12	63588882	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.103448
12	63588918	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.371429
12	63588925	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.0666667
12	63588956	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.153846
12	63589020	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.105263
12	63589048	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.117647
15	63675936	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.181818
15	63675996	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.4375
15	63676001	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63676058	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.133333
15	63676064	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.214286
15	63676097	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.153846
15	63693304	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.545455
15	63693346	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.142857
15	63693408	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.153846
15	63693412	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.142857
15	63693510	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.615385
15	63693511	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.230769
15	63693517	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.230769
15	63693522	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.307692
15	63720196	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.3
17	63725477	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.454545
17	63725531	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.583333
17	63725534	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intergenic	.	.	Alu	0.333333
15	63739377	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
15	63739392	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.333333
15	63739393	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.466667
15	63739425	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.117647
15	63739478	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.105263
15	63739594	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63739622	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63739659	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.181818
15	63739691	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.5
15	63739704	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.133333
15	63739707	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.3125
15	63739709	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.117647
15	63739755	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.291667
15	63739775	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	63739781	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.428571
15	63739800	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.117647
17	63840453	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.727273
15	64109206	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.25
15	64109581	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.333333
11	64187855	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.2
7	64345513	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.384615
7	64345514	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.142857
7	64345567	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	1
7	64345568	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	1
7	64345578	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.117647
7	64345582	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.111111
7	64345659	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.416667
7	64345684	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.142857
15	64359635	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64359681	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.7
12	64463251	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.272727
12	64463312	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.466667
12	64463517	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.333333
12	64463605	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.153846
14	64519753	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.384615
14	64519757	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.3
15	64537426	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.153846
15	64537457	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.153846
17	64576948	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.1875
17	64576963	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.411765
17	64646203	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
15	64646819	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.384615
17	64655395	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
15	64711474	A->G	+	ENSG00000259635	AC100830.1	antisense	Intergenic	.	.	Alu	0.363636
15	64711480	A->G	+	ENSG00000259635	AC100830.1	antisense	Intergenic	.	.	Alu	0.181818
15	64711484	A->G	+	ENSG00000259635	AC100830.1	antisense	Intergenic	.	.	Alu	0.272727
5	64758037	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.272727
7	64799346	A->G	+	ENSG00000197008	ZNF138	protein_coding	Intergenic	.	.	Alu	0.117647
1	64940445	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.181818
1	64951913	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64955218	A->G	-	ENSG00000166839	ANKDD1A	protein_coding	Intergenic	.	.	Alu	0.5
15	64956425	A->G	-	ENSG00000166839	ANKDD1A	protein_coding	Intergenic	.	.	Alu	0.6
15	64956427	A->G	-	ENSG00000166839	ANKDD1A	protein_coding	Intergenic	.	.	Alu	0.8
1	65023616	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	65023622	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	65046959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
11	65101544	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.166667
2	65101981	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
15	65176656	A->G	-	ENSG00000166855	CLPX	protein_coding	Intergenic	.	.	Alu	0.363636
15	65176658	A->G	-	ENSG00000166855	CLPX	protein_coding	Intergenic	.	.	Alu	0.272727
2	65229677	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.230769
12	65286783	A->G	+	ENSG00000174099	MSRB3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	65286787	A->G	+	ENSG00000174099	MSRB3	protein_coding	Intergenic	.	.	Alu	0.52381
15	65296676	A->G	+	ENSG00000138617	PARP16	protein_coding	Intergenic	.	.	Alu	0.181818
15	65296798	A->G	+	ENSG00000138617	PARP16	protein_coding	Intergenic	.	.	Alu	0.0833333
12	65371073	A->G	+	ENSG00000174099	MSRB3	protein_coding	Intergenic	.	.	Alu	0.2
5	65540940	A->G	-	ENSG00000123219	CENPK	protein_coding	Intergenic	.	.	Alu	0.2
15	65542019	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.214286
15	65542020	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.4
15	65542376	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.2
15	65542389	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.2
15	65542397	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.6
15	65542507	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.4
15	65549509	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	65698932	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65698957	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65698989	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65699017	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.222222
15	65708135	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0689655
15	65719030	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0714286
15	65728653	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
8	65729624	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.08
8	65729649	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.0625
8	65729687	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.1875
8	65730235	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.321429
8	65730279	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.47619
8	65730283	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.36
8	65730286	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.423077
8	65730345	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.30303
8	65730348	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.09375
8	65730349	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	65730350	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.4
8	65730356	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.115385
8	65730357	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	65730358	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	65730459	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.117647
8	65730671	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.133333
8	65736550	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.7
8	65736611	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.181818
8	65736631	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.2
8	65736635	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.363636
8	65736639	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.181818
8	65736656	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.7
8	65736693	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.1
8	65736905	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.2
15	65746538	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	1
15	65746551	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65746632	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.235294
15	65746658	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65746659	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
11	65772989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	65898205	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.181818
11	65974532	A->G	+	ENSG00000175467	SART1	protein_coding	Intergenic	.	.	Alu	0.2
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.0909091
7	65981143	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.15
7	65981155	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.097561
7	65981343	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.15
5	66096092	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
7	66116906	A->G	+	ENSG00000249319	AC068533.4	protein_coding	Intergenic	.	.	Alu	0.181818
5	66149170	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.294118
5	66149187	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.133333
5	66149200	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.142857
11	66170799	A->G	+	ENSG00000175115	PACS1	protein_coding	Intergenic	.	.	Alu	0.2
11	66170816	A->G	+	ENSG00000175115	PACS1	protein_coding	Intergenic	.	.	Alu	0.181818
12	66194709	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.4
12	66194762	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66202503	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	66202516	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.111111
12	66202517	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.103448
12	66202694	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	66202707	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.176471
12	66202725	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0714286
12	66202776	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.08
2	66558098	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.214286
2	66558124	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.1
2	66558207	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	66560399	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.3
2	66560400	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.5
2	66560404	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.454545
2	66560501	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.214286
11	66629807	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66635027	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.466667
11	66635045	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0625
11	66635088	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0454545
11	66635105	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.6
11	66635117	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0545455
11	66635127	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0384615
11	66635133	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0338983
11	66635140	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0512821
11	66635154	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.178571
11	66635167	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66635170	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66635248	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0645161
11	66635249	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.315789
11	66635261	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	1
11	66635263	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0681818
11	66635353	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66635360	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	1
11	66635397	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0294118
11	66635414	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0609756
11	66635415	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.025
11	66635423	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.136364
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.75
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.539326
11	66635436	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0612245
11	66635439	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0227273
11	66635454	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66635467	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.168831
11	66635480	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0365854
11	66635481	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0232558
11	66635494	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0705882
11	66635503	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0344828
11	66635507	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0227273
11	66635635	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0540541
11	66635643	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0384615
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.241379
11	66635659	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.046875
11	66635720	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0576923
11	66635738	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0384615
11	66635746	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0833333
11	66635749	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0888889
11	66635750	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0444444
11	66635754	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0666667
11	66635772	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.192308
11	66635774	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.176471
11	66635780	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0652174
11	66635781	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0980392
11	66635801	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0416667
11	66636149	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.636364
7	66656726	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.181818
11	66657506	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66657598	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.272727
11	66657761	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.3
7	66658413	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.3
7	66658971	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.333333
7	66658996	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.25
7	66658997	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.25
7	66658998	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.153846
7	66659331	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.105263
7	66659412	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.105263
7	66660311	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.0909091
7	66663872	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.2
11	66670728	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.133333
11	66670749	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
11	66670763	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.272727
11	66670765	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.4
11	66671815	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.416667
11	66671821	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.166667
11	66672138	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.4
11	66672145	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.08
11	66672151	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.290323
11	66672152	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.290323
11	66672221	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.151515
11	66672229	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.225806
11	66672230	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.16129
11	66672231	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.32
11	66672289	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.210526
11	66672295	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.411765
11	66672307	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.190476
11	66672319	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.142857
11	66672325	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.181818
11	66672331	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.25
11	66672570	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.181818
11	66672576	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.285714
11	66672771	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.133333
7	66709763	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
8	66717379	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.153846
8	66717409	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.214286
7	66742057	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.230769
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.666667
7	66743386	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.25
7	66762484	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.3
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.190476
1	66936751	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.285714
1	66936789	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.136364
1	66936792	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.105263
1	66936813	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.266667
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.517241
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.5
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.545455
1	66936919	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	66936927	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1
1	66936949	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	66937464	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1
1	66937465	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1
1	66977944	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.3
14	67011489	A->G	+	ENSG00000171723	GPHN	protein_coding	Intergenic	.	.	Alu	0.166667
8	67103566	A->G	+	ENSG00000104218	CSPP1	protein_coding	Intergenic	.	.	Alu	0.230769
11	67126061	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.230769
11	67126082	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	67136423	A->G	+	ENSG00000104218	CSPP1	protein_coding	Intergenic	.	.	Alu	0.142857
17	67195963	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.125
17	67195989	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.117647
7	67240280	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	67240345	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
7	67325028	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	67354943	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.4
17	67355229	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.172414
17	67355230	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.233333
17	67355240	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.541667
17	67355261	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0625
17	67355265	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.2
17	67355267	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0689655
17	67355268	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0714286
1	67355369	A->G	+	ENSG00000081985	IL12RB2	protein_coding	Intergenic	.	.	Alu	0.166667
1	67387580	A->G	+	ENSG00000081985	IL12RB2	protein_coding	Intergenic	.	.	Alu	0.454545
1	67417574	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	67417613	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.555556
16	67566346	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.142857
16	67566348	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67566357	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.294118
16	67566403	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.181818
16	67566670	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.136364
16	67566755	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67566761	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.5
16	67566833	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67566845	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.294118
16	67566977	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.4
17	67876551	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.153846
17	67876610	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.272727
17	67876620	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.125
17	67876685	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.210526
17	67876686	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.368421
17	67876695	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67882877	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.25
17	67883058	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.266667
17	67883061	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.1875
17	67883131	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.307692
17	67883195	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67883209	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
10	67890792	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
17	67895212	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.363636
17	67895218	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67895239	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67897072	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.111111
17	67897073	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67897078	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.190476
17	67897103	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.0740741
17	67897121	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.157895
17	67897140	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67897150	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.111111
17	67897194	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.133333
17	67897221	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.411765
17	67897230	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67898293	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.125
17	67971551	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.3
8	68093296	A->G	+	ENSG00000046889	PREX2	protein_coding	Intergenic	.	.	Alu	0.0606061
17	68117591	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	68119324	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	68120627	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	68120694	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	68123823	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	68123903	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
11	68168064	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.2
11	68168076	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.2
2	68173668	A->G	-	ENSG00000115946	PNO1	protein_coding	Intergenic	.	.	Alu	0.1875
15	68202511	A->G	-	ENSG00000129007	CALML4	protein_coding	Intergenic	.	.	Alu	0.2
2	68202563	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	68202781	A->G	-	ENSG00000129007	CALML4	protein_coding	Intergenic	.	.	Alu	0.2
2	68205328	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.230769
2	68205380	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.214286
2	68205381	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.142857
2	68246142	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.277778
2	68246186	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.125
2	68246199	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.266667
2	68246212	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.117647
2	68246213	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.2
2	68246239	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.3
2	68246242	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.181818
2	68246295	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.307692
2	68246345	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.555556
2	68246346	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.411765
10	68460196	A->G	-	ENSG00000138346	DNA2	protein_coding	Intergenic	.	.	Alu	0.181818
11	68482258	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.1
11	68482346	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0740741
11	68486525	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.166667
11	68493988	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0769231
10	68497754	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.6
11	68533450	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.117647
11	68593860	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.2
12	68613195	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68613198	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68637365	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68637401	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68637422	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0952381
12	68637436	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.217391
12	68637438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68637454	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68637476	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.075
12	68637477	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68637517	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.176471
12	68637518	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.242424
12	68637595	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
10	68760274	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.272727
10	68760281	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.272727
10	68760614	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.235294
10	68760652	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.15
10	68760666	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.103448
10	68760671	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.129032
10	68760677	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.09375
10	68760680	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.0645161
10	68760681	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.0666667
10	68760711	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.08
10	68760717	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	68760743	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.5
10	68760744	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.391304
10	68760749	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.0869565
10	68760776	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.117647
10	68769820	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.105263
10	68769826	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.105263
10	68920846	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.333333
10	68920847	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.5
10	68975928	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.2
10	68976093	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.4
10	68976152	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.5
3	69075907	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.2
3	69215430	A->G	-	ENSG00000114541	FRMD4B	protein_coding	Intergenic	.	.	Alu	0.125
3	69215447	A->G	-	ENSG00000114541	FRMD4B	protein_coding	Intergenic	.	.	Alu	0.142857
3	69245593	A->G	-	ENSG00000114541	FRMD4B	protein_coding	Intergenic	.	.	Alu	0.2
3	69245606	A->G	-	ENSG00000114541	FRMD4B	protein_coding	Intergenic	.	.	Alu	0.2
12	69250666	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.142857
16	69354636	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.181818
16	69354824	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.545455
16	69354835	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.2
16	69354851	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.266667
16	69355055	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.166667
16	69355231	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.3
16	69355257	A->G	-	ENSG00000260371	AC026464.3	protein_coding	Intergenic	.	.	Alu	0.272727
16	69381680	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.153846
12	69540132	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.142857
12	69545626	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.230769
16	69571193	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69634131	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69643057	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0833333
7	69921810	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
7	69921811	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.3
7	69921841	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.214286
7	69921944	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.125
16	69995493	A->G	-	ENSG00000226232	NPIPB14P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0606061
16	69995499	A->G	-	ENSG00000226232	NPIPB14P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0967742
18	70062736	A->G	-	ENSG00000176225	RTTN	protein_coding	Intergenic	.	.	Alu	0.454545
18	70062744	A->G	-	ENSG00000176225	RTTN	protein_coding	Intergenic	.	.	Alu	0.461538
18	70062779	A->G	-	ENSG00000176225	RTTN	protein_coding	Intergenic	.	.	Alu	0.3
7	70070459	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.153846
16	70117986	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.181818
16	70117995	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.153846
16	70118013	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.153846
16	70118014	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.153846
16	70118025	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.25
X	70137904	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
X	70137931	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.3
X	70137947	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.214286
X	70138015	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.190476
X	70138056	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.15
X	70138290	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.157895
X	70138295	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
X	70138299	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
X	70138366	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.375
8	70145479	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	1
7	70207864	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.25
7	70211931	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
2	70217452	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.0833333
2	70219596	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
2	70219599	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.4
2	70219778	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.0625
2	70219850	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.0909091
2	70219852	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.454545
2	70219869	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.111111
2	70238382	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.214286
2	70238403	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.142857
2	70238409	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.285714
2	70238438	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.181818
1	70290620	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.105263
11	70297366	A->G	+	ENSG00000131626	PPFIA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	70308434	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.125
16	70362266	A->G	+	ENSG00000260537	AC012184.2	protein_coding	Intergenic	.	.	Alu	0.2
7	70439291	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.214286
7	70439352	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.142857
7	70439356	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.181818
7	70439418	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.130435
7	70440125	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.636364
7	70440126	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.833333
7	70440134	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.545455
7	70440138	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.153846
7	70440183	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.105263
7	70440297	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.230769
7	70440301	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.142857
7	70440310	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.15
7	70440314	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.157895
7	70440328	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.125
7	70440342	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.470588
7	70543441	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.153846
7	70728489	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
5	70855872	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	70912114	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.166667
X	71057789	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.5
X	71057946	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.2
3	71078083	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71084815	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.833333
3	71085287	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71085307	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.125
3	71085353	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.421053
3	71085430	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.125
3	71085437	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	71178053	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71178383	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.3
3	71188626	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71222607	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.3
3	71222620	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71263883	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.105263
3	71263909	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	71267894	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0588235
3	71267908	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.115385
3	71267935	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.176471
3	71267966	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.769231
3	71268187	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.428571
3	71268188	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.428571
3	71268229	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0638298
3	71268231	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.25
3	71277097	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.111111
3	71277123	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.0540541
3	71277163	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.317073
3	71277164	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.075
3	71277214	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.075
3	71289725	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	71289739	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.15
3	71289744	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.157895
3	71289745	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.157895
3	71312869	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.363636
3	71313132	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	71313589	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71313664	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71327423	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.125
3	71343648	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.368421
3	71343653	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.125
3	71343679	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	71343708	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.666667
3	71343709	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.666667
3	71343710	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71343771	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	71343801	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.6
3	71343802	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.533333
14	71356529	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0540541
14	71356545	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0952381
14	71356549	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.125
14	71356621	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	71371694	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.384615
14	71373504	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.1
14	71373505	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.172414
3	71381262	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.214286
3	71381299	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.08
3	71381319	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	71381320	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.08
3	71381322	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0769231
14	71403550	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.125
3	71404320	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	71404328	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.133333
3	71404391	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.384615
3	71404394	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.384615
3	71404400	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.214286
14	71416937	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.153846
14	71440050	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.7
14	71440054	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0952381
14	71440106	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.666667
14	71440207	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
14	71440210	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.157895
14	71440288	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71440289	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.545455
14	71440295	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.714286
14	71440433	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.325
14	71440446	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.097561
14	71440498	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0416667
14	71440499	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.12766
14	71440500	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0888889
14	71440528	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.14
14	71440563	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.354839
14	71451498	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.1
14	71453803	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.777778
14	71453808	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.351351
14	71453847	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.146341
14	71453874	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0576923
14	71453879	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0588235
14	71453890	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0652174
14	71453896	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0465116
14	71453915	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0571429
14	71453927	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0681818
14	71453929	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.422222
14	71453935	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.08
14	71453940	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0408163
3	71460072	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	71476629	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	71476704	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
14	71480566	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
14	71480576	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.5
14	71480597	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
14	71480641	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71480642	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.214286
14	71480651	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.166667
14	71480664	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.166667
14	71480677	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.214286
14	71480687	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.214286
14	71495794	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
5	71546421	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	71546462	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.1875
5	71546497	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.136364
5	71546498	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	71546529	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.15
5	71546539	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.285714
5	71546543	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.235294
3	71558591	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.176471
3	71558606	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.285714
3	71558641	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	71558769	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.238095
12	71774381	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0645161
12	71850487	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0740741
12	71850490	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.192308
12	71850513	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
12	71850530	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.5
12	71850546	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.5
12	71850552	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.625
12	71850554	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.25
12	71850777	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0833333
12	71850780	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71850837	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.1
12	71850864	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.434783
12	71850866	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.521739
12	71850872	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0952381
12	71850888	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.333333
12	71850889	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.173913
15	71852501	A->G	-	ENSG00000066933	MYO9A	protein_coding	Intergenic	.	.	Alu	0.818182
11	71895395	A->G	-	ENSG00000254469	AP002495.2	protein_coding	Intergenic	.	.	Alu	0.416667
11	71895431	A->G	-	ENSG00000254469	AP002495.2	protein_coding	Intergenic	.	.	Alu	0.363636
16	71898602	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.105263
7	71980015	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	71980074	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.333333
7	71980225	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	71980324	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.315789
7	71985396	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.230769
7	71985414	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	71985461	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.384615
7	72013314	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.133333
7	72013344	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	72018975	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	72087795	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.2
7	72180705	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.3
7	72197326	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	72197330	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	72197339	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.25
7	72197366	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	1
7	72197369	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	72197446	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	72217971	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.7
7	72217975	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	72246812	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.4
7	72247415	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	72254834	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.105263
7	72254904	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	72254905	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.2
7	72255296	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	72255363	A->G	-	ENSG00000183166	CALN1	protein_coding	Intergenic	.	.	Alu	0.181818
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.138889
3	72416695	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0909091
3	72416696	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0571429
3	72416701	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0571429
3	72416710	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0540541
X	72469276	A->G	-	ENSG00000147099	HDAC8	protein_coding	Intergenic	.	.	Alu	0.454545
X	72469280	A->G	-	ENSG00000147099	HDAC8	protein_coding	Intergenic	.	.	Alu	0.7
15	72505830	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	72505853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	72505865	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	72505875	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	72505916	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	72506170	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	72506171	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0416667
15	72506203	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0727273
15	72506229	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.6
15	72506230	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0545455
15	72506235	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.05
15	72506243	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.8
15	72506292	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.230769
15	72510557	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.190476
15	72510616	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72510622	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.12
15	72510626	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	72510658	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.08
15	72510682	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.16
15	72510689	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	72522243	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.285714
15	72522488	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72575443	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.114286
15	72575944	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72576385	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0555556
17	72731886	A->G	-	ENSG00000133195	SLC39A11	protein_coding	Intergenic	.	.	Alu	0.105263
6	72744690	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.142857
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.545455
15	72763280	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.3
15	72779341	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.1875
15	72779433	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.142857
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.153846
17	72781624	A->G	-	ENSG00000133195	SLC39A11	protein_coding	Intergenic	.	.	Alu	0.3
6	72817779	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.363636
6	72817790	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.153846
11	72835845	A->G	-	ENSG00000168010	ATG16L2	protein_coding	Intergenic	.	.	Alu	0.181818
5	72868269	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72868275	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.266667
5	72868311	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.285714
5	72880705	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
11	72888737	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.6
11	72888800	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.230769
11	72888801	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.153846
11	72888803	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.166667
13	72957737	A->G	+	ENSG00000083535	PIBF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	72957820	A->G	+	ENSG00000083535	PIBF1	protein_coding	Intergenic	.	.	Alu	0.25
13	72957822	A->G	+	ENSG00000083535	PIBF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	72957826	A->G	+	ENSG00000083535	PIBF1	protein_coding	Intergenic	.	.	Alu	0.25
13	72957828	A->G	+	ENSG00000083535	PIBF1	protein_coding	Intergenic	.	.	Alu	0.25
7	72981981	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	72994477	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.368421
7	72996916	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.136364
7	72996917	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.136364
7	72996930	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.192308
7	72996942	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
7	72996952	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
7	72996955	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	72996967	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
10	73040561	A->G	-	ENSG00000122884	P4HA1	protein_coding	Intergenic	.	.	Alu	0.4
11	73053083	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.133333
14	73139029	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.157895
14	73139030	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.157895
14	73139064	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	73139162	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73139419	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73152486	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.235294
14	73152500	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	73155807	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.272727
10	73155808	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.3
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0810811
9	73157434	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.031746
9	73157534	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0338983
4	73189465	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.3
4	73189468	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.105263
4	73189469	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.105263
4	73189473	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.111111
4	73189489	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
4	73189504	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.153846
4	73189521	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.411765
4	73189535	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.666667
4	73189598	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.125
4	73189599	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.25
4	73189607	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.1875
4	73196137	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.454545
4	73196138	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.35
4	73196141	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.157895
4	73196206	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.307692
4	73196270	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.277778
4	73196271	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.222222
4	73226096	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
4	73226242	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.142857
4	73226491	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0769231
4	73226614	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0909091
4	73226618	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.08
4	73226817	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.263158
4	73240947	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.125
4	73240973	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.384615
4	73240982	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.117647
4	73241029	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.117647
4	73241030	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.1875
4	73241066	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.6875
7	73281283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
14	73286135	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.642857
14	73286140	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.25
10	73480582	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.09375
10	73480610	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.15
10	73480687	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.368421
10	73480695	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.166667
10	73480700	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.238095
10	73480740	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.4
10	73481254	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.75
10	73481389	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.3
10	73490921	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.166667
6	73513970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	73513976	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
6	73513980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
6	73514305	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
6	73514311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
6	73514337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
6	73514451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0434783
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
7	73515609	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.363636
7	73516265	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.2
7	73516267	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.2
7	73516317	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.117647
7	73684762	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.214286
11	73697469	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.181818
6	73715450	A->G	+	ENSG00000156535	CD109	protein_coding	Intergenic	.	.	Alu	0.142857
8	73716039	A->G	-	ENSG00000040341	STAU2	protein_coding	Intergenic	.	.	Alu	0.181818
8	73716053	A->G	-	ENSG00000040341	STAU2	protein_coding	Intergenic	.	.	Alu	0.272727
8	73872998	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.333333
8	73873017	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.533333
8	73873029	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.294118
8	73873050	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.111111
8	73873091	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.583333
X	73989748	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.2
X	73989896	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.666667
X	73989897	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.333333
X	73989906	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.266667
X	73989937	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.166667
X	73989938	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.272727
X	73989943	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.3
X	73989949	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.230769
X	73990406	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.363636
10	74045476	A->G	+	ENSG00000035403	VCL	protein_coding	Intergenic	.	.	Alu	0.111111
10	74059159	A->G	+	ENSG00000035403	VCL	protein_coding	Intergenic	.	.	Alu	0.272727
10	74060509	A->G	+	ENSG00000035403	VCL	protein_coding	Intergenic	.	.	Alu	0.136364
10	74060608	A->G	+	ENSG00000035403	VCL	protein_coding	Intergenic	.	.	Alu	0.105263
10	74092090	A->G	+	ENSG00000035403	VCL	protein_coding	Intergenic	.	.	Alu	0.214286
2	74096877	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.142857
7	74178318	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.357143
7	74178340	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.105263
7	74178342	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.176471
7	74178343	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.25
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.4
7	74178423	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.3125
7	74178450	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.230769
10	74185948	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.411765
10	74204929	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
X	74208259	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.222222
X	74208284	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74208330	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.105263
X	74223557	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0882353
X	74223717	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74225527	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.555556
X	74225531	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.375
X	74225570	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74225588	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.733333
X	74225601	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.409091
X	74225612	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.363636
X	74225620	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.15
X	74225628	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74225656	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.210526
X	74265349	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74265460	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74265462	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.294118
X	74265484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.411765
X	74265497	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.318182
X	74265501	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.227273
X	74265502	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.190476
X	74265939	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25641
X	74265942	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.170732
X	74265969	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0512821
X	74265972	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.184211
X	74265977	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.175
X	74265990	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0882353
X	74265998	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.382353
X	74266004	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.463415
X	74266028	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.114754
X	74266034	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.145455
X	74266054	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.243902
X	74266089	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0416667
X	74266090	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3125
X	74266093	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.607843
X	74266095	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0392157
X	74266097	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.113208
X	74266098	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0545455
X	74266120	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.28
X	74266126	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.037037
X	74266131	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.107143
X	74266144	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74266145	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0425532
X	74266150	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0666667
X	74266153	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.190476
X	74266166	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0666667
X	74266169	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0769231
X	74266266	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.115385
X	74266285	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.105263
X	74266286	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0769231
X	74266294	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0638298
X	74266299	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0888889
X	74266317	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.244898
X	74266318	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.326923
X	74266333	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.06
X	74266339	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.148936
X	74266368	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.190476
X	74266391	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0392157
X	74266394	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0727273
X	74266407	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.173077
X	74266408	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.285714
X	74266411	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.661017
X	74266444	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74266449	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0338983
X	74266462	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0652174
X	74266463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.217391
X	74266476	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74266479	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.131579
X	74266484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0810811
X	74266485	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0810811
X	74266507	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74277823	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.666667
16	74312555	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.666667
16	74312795	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.133333
16	74312803	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.416667
16	74313813	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.142857
16	74313816	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.142857
16	74313903	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.142857
16	74313955	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.166667
16	74313971	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.125
16	74314131	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.2
16	74318432	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.2
16	74319885	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.214286
10	74346963	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.272727
10	74346992	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.666667
10	74347019	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
16	74363266	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
10	74532780	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.181818
10	74532781	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.166667
X	74571991	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	74571999	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	74704796	A->G	+	ENSG00000263001	GTF2I	protein_coding	Intergenic	.	.	Alu	0.181818
10	74712289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
10	74712317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
11	74764386	A->G	+	ENSG00000166439	RNF169	protein_coding	Intergenic	.	.	Alu	0.166667
10	74845658	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.125
10	74845670	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.421053
10	74845681	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.230769
15	74847154	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.5
15	74847261	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.2
7	74861572	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74870433	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74870434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	74870440	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
7	74870604	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
7	74876940	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
7	74877015	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	74878737	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
7	74878816	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	74878846	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
7	74878847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.137931
7	74878855	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
7	74879103	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	74879175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.52381
7	74879884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
7	74879923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74880402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	74880407	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
7	74880883	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74880891	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74881413	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74881486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.470588
7	74881511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
10	74934034	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	74934035	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.181818
16	75026750	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.2
17	75224712	A->G	+	ENSG00000125450	NUP85	protein_coding	Intergenic	.	.	Alu	0.583333
17	75324268	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75346331	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75346420	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.25
7	75368313	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
7	75370622	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.545455
10	75531990	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.117647
17	75598301	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.111111
17	75598457	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.230769
17	75598467	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.235294
6	75612928	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75612943	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.538462
6	75612954	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
6	75612994	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.125
6	75613003	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.153846
16	75651439	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.130435
16	75651463	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.125
16	75651473	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.214286
16	75651536	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.125
16	75651538	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0909091
16	75651550	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.1
16	75651568	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.45
16	75651569	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.1
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.363636
6	75698990	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.153846
6	75698995	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
14	75790602	A->G	+	ENSG00000119685	TTLL5	protein_coding	Intergenic	.	.	Alu	0.545455
14	75790603	A->G	+	ENSG00000119685	TTLL5	protein_coding	Intergenic	.	.	Alu	0.272727
17	75806276	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.166667
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0952381
4	75916940	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.166667
11	76040352	A->G	+	ENSG00000198382	UVRAG	protein_coding	Intergenic	.	.	Alu	0.416667
17	76055935	A->G	-	ENSG00000167881	SRP68	protein_coding	Intergenic	.	.	Alu	0.153846
17	76055945	A->G	-	ENSG00000167881	SRP68	protein_coding	Intergenic	.	.	Alu	0.285714
17	76055976	A->G	-	ENSG00000167881	SRP68	protein_coding	Intergenic	.	.	Alu	0.166667
5	76415825	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	76415830	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
5	76415852	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.105263
5	76418020	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.571429
5	76418021	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.461538
5	76418060	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.142857
5	76418092	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	76418096	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.133333
5	76455271	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	76461247	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.8
5	76461312	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.454545
5	76461313	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
12	76483812	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.388889
12	76483813	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.277778
12	76483819	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.111111
12	76483839	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
12	76483878	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76483917	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.363636
12	76483948	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
5	76507906	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.105263
5	76508102	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
5	76508152	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	76534317	A->G	-	ENSG00000161544	CYGB	protein_coding	Intergenic	.	.	Alu	0.166667
17	76534348	A->G	-	ENSG00000161544	CYGB	protein_coding	Intergenic	.	.	Alu	0.142857
5	76610480	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	76610496	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.153846
7	76614738	A->G	+	ENSG00000205485	AC004980.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	76614740	A->G	+	ENSG00000205485	AC004980.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	76614741	A->G	+	ENSG00000205485	AC004980.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
5	76671140	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	76671141	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
12	76766939	A->G	+	ENSG00000186908	ZDHHC17	protein_coding	Intergenic	.	.	Alu	0.153846
5	76865803	A->G	+	ENSG00000171643	S100Z	protein_coding	Intergenic	.	.	Alu	0.181818
5	76957569	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.2
5	76957646	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.263158
5	76957658	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.227273
5	76957904	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.45283
5	76957905	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.636364
5	76957930	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0769231
5	76957981	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0377358
5	76957982	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0377358
5	76957983	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0377358
5	76957994	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.142857
5	76957997	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.16129
5	76957998	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0483871
5	76957999	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0655738
5	76958000	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0491803
5	76958012	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0392157
5	76958038	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.666667
5	76958052	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.195122
5	76958074	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.463415
5	76958100	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.111111
5	76958104	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0512821
5	76962517	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.108108
5	76962524	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0465116
5	76962550	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0526316
5	76962577	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.05
5	76964759	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.2
5	76967111	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.214286
5	76967113	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.133333
5	76967121	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.222222
5	76967122	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.2
5	76967157	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.227273
5	76967183	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0769231
5	76967191	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.0714286
4	77056725	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.181818
7	77063836	A->G	+	ENSG00000259628	AC007000.3	processed_transcript	Intergenic	.	.	Alu	0.133333
7	77063926	A->G	+	ENSG00000259628	AC007000.3	processed_transcript	Intergenic	.	.	Alu	0.15
17	77090734	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.25
17	77202705	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.166667
14	77529760	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.166667
14	77529761	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.166667
1	77570764	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intergenic	.	.	Alu	0.3
11	77599559	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	77602743	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intergenic	.	.	Alu	0.333333
1	77698188	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.166667
1	77698192	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.333333
1	77698278	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.214286
1	77698345	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.6
1	77698346	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.272727
14	77703665	A->G	-	ENSG00000100601	ALKBH1	protein_coding	Intergenic	.	.	Alu	0.117647
14	77703666	A->G	-	ENSG00000100601	ALKBH1	protein_coding	Intergenic	.	.	Alu	0.117647
4	77790786	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.166667
4	77790787	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.4
9	77837960	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.3125
9	77837982	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.4
9	77838002	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.277778
9	77838022	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77838063	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.307692
9	77838068	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77838284	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.103448
9	77838308	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0689655
X	77851044	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.285714
X	77851067	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.166667
11	77855601	A->G	-	ENSG00000087884	AAMDC	protein_coding	Intergenic	.	.	Alu	0.166667
11	77855602	A->G	-	ENSG00000087884	AAMDC	protein_coding	Intergenic	.	.	Alu	0.117647
9	77870416	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.117647
9	77870464	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.105263
9	77870474	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.157895
9	77984351	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.3
9	77984357	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	77984372	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77986706	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.111111
9	77986775	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.307692
9	77986776	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.333333
11	78389444	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.3
5	78403818	A->G	+	ENSG00000085365	SCAMP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	78403844	A->G	+	ENSG00000085365	SCAMP1	protein_coding	Intergenic	.	.	Alu	0.466667
16	78455407	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.214286
16	78455421	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.384615
16	78455424	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.8
16	78455476	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.25
15	78455483	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.2
16	78455509	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.8125
16	78455522	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.4375
16	78455532	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.25
11	78460349	A->G	-	ENSG00000137513	NARS2	protein_coding	Intergenic	.	.	Alu	0.2
16	78472599	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.619048
16	78472613	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.166667
16	78472631	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.0833333
16	78472644	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.136364
16	78472650	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.227273
16	78472658	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.136364
16	78472662	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.136364
16	78472682	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.111111
16	78472688	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.136364
16	78472694	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.0952381
16	78472715	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.230769
16	78472730	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78473229	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.181818
16	78473230	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.272727
16	78473339	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.111111
16	78473392	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78473398	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.25
15	78489101	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.3
16	78509979	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.117647
16	78567432	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.3
17	78757072	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.176471
17	78757132	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78790178	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0952381
17	78790429	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0625
16	78802666	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78802683	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78802687	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78802691	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78802696	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78842265	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.230769
4	78867050	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	78867097	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.333333
4	78867121	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.08
4	78867156	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.08
4	78867157	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.892857
4	78867160	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.5
15	78882966	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	78888307	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.166667
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
15	78905723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
16	79019036	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
9	79586295	A->G	+	ENSG00000106829	TLE4	protein_coding	Intergenic	.	.	Alu	0.2
12	79601424	A->G	-	ENSG00000177425	PAWR	protein_coding	Intergenic	.	.	Alu	0.157895
12	79601447	A->G	-	ENSG00000177425	PAWR	protein_coding	Intergenic	.	.	Alu	0.25
4	79933827	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.181818
4	79933873	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.73913
4	79933916	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.25
4	79933917	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.166667
8	79947708	A->G	-	ENSG00000147586	MRPS28	protein_coding	Intergenic	.	.	Alu	0.545455
15	80066688	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1
15	80066737	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80066738	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.733333
15	80066739	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80066741	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.176471
15	80066776	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80066777	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1875
15	80066786	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80066812	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80066818	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80066860	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.35
9	80077467	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	80092267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
15	80092386	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0645161
9	80105471	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
9	80105476	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	80140168	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	80140169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
15	80140204	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
15	80140245	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	80185951	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	80342667	A->G	+	ENSG00000083123	BCKDHB	protein_coding	Intergenic	.	.	Alu	0.272727
6	80342681	A->G	+	ENSG00000083123	BCKDHB	protein_coding	Intergenic	.	.	Alu	0.181818
5	80876584	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
16	81030628	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.333333
16	81030629	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.416667
16	81030655	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.176471
5	81453553	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.157895
5	81453554	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.130435
5	81453595	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	81463443	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.117647
5	81463456	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0617284
5	81463482	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	1
5	81463483	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0247934
5	81463495	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0478469
5	81463532	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0573248
5	81463543	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.375566
5	81463551	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0379747
5	81463576	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.280488
5	81463578	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0327869
5	81463591	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.227513
5	81463600	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0591716
5	81463613	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.104167
5	81463614	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0204082
5	81463617	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.709845
5	81463618	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.167598
5	81463643	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0245098
5	81463659	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	1
5	81463811	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0363636
5	81463866	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0804598
5	81463906	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0294118
5	81463907	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.194175
5	81463925	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0625
5	81463942	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0212766
5	81463944	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0454545
5	81463945	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0238095
5	81463946	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0875
5	81463947	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0405405
5	81463951	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.553846
5	81463952	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.369231
5	81463953	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0307692
5	81463968	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.206897
5	81463996	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.151515
5	81464001	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.426357
5	81464015	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.666667
5	81464020	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.120301
5	81464036	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0227273
5	81464042	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0309278
5	81464060	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0449438
5	81464063	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.123596
5	81464064	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0337079
5	81501625	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.16
5	81501639	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.08
5	81501761	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.444444
5	81501769	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.24
5	81501835	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
16	81504478	A->G	+	ENSG00000153815	CMIP	protein_coding	Intergenic	.	.	Alu	0.181818
16	81504481	A->G	+	ENSG00000153815	CMIP	protein_coding	Intergenic	.	.	Alu	0.2
5	81544188	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	81595673	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.181818
17	81595682	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
4	82366426	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intergenic	.	.	Alu	0.0434783
4	82884083	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.2
4	82884124	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.363636
4	82884125	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.272727
15	83052769	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.1875
4	83075005	A->G	-	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.333333
4	83075009	A->G	-	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.166667
4	83106164	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.454545
4	83106490	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.363636
4	83106506	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.181818
11	83184005	A->G	+	ENSG00000254676	AP000873.4	sense_overlapping	Intergenic	.	.	Alu	0.25
11	83190242	A->G	-	ENSG00000247137	AP000873.2	processed_transcript	Intergenic	.	.	Alu	0.3
15	84638886	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
15	84638899	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
16	84750322	A->G	+	ENSG00000103194	USP10	protein_coding	Intergenic	.	.	Alu	0.125
15	84795958	A->G	+	ENSG00000166716	ZNF592	protein_coding	Intergenic	.	.	Alu	0.2
15	84796038	A->G	+	ENSG00000166716	ZNF592	protein_coding	Intergenic	.	.	Alu	0.2
2	85609813	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.142857
2	85609818	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.769231
2	85609819	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.692308
2	85609845	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.461538
2	85609849	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.230769
6	85633777	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.5
6	85672835	A->G	-	ENSG00000203875	SNHG5	processed_transcript	Intergenic	.	.	Alu	0.153846
15	85687925	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.125
1	85883417	A->G	-	ENSG00000171502	COL24A1	protein_coding	Intergenic	.	.	Alu	0.181818
1	86719945	A->G	+	ENSG00000097033	SH3GLB1	protein_coding	Intergenic	.	.	Alu	0.684211
1	86891147	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.214286
4	87022054	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
4	87022055	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
10	87103979	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.3
10	87104293	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.466667
10	87104426	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.15
10	87104432	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.2
10	87104449	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.117647
10	87104870	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.272727
10	87107257	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.153846
10	87208302	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.166667
10	87208315	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.3
10	87208329	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.3
10	87208394	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.0952381
10	87208403	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.130435
10	87208414	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.181818
10	87208418	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.238095
10	87215116	A->G	-	ENSG00000285257	AL157893.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
6	87250314	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.25
6	87250344	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87250349	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.357143
10	87315597	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.153846
10	87315644	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.357143
5	87377455	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.2
6	87547745	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.461538
6	87547764	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.466667
6	87547929	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.181818
9	87702820	A->G	+	ENSG00000196730	DAPK1	protein_coding	Intergenic	.	.	Alu	0.2
16	87731148	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.222222
16	87731175	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.153846
16	87731188	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.136364
16	87731192	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.0769231
16	87731201	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.363636
16	87731202	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.285714
16	87731238	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.157895
16	87731244	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.15
16	87731253	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.315789
16	87731314	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.217391
3	87841636	A->G	+	.	.	.	Intergenic	.	.	Alu	0.134615
3	87841644	A->G	+	.	.	.	Intergenic	.	.	Alu	0.276596
3	87841645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
3	87841675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
3	87841691	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
3	87841722	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
3	87841724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
3	87841729	A->G	+	.	.	.	Intergenic	.	.	Alu	0.138889
3	87841738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
3	87841742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
3	87841744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	87841753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	87841779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.146341
3	87841780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	87841785	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
3	87841789	A->G	+	.	.	.	Intergenic	.	.	Alu	0.297297
3	87841793	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108108
3	87841832	A->G	+	.	.	.	Intergenic	.	.	Alu	1
3	87841850	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
3	87841855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
3	87842181	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	87842183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	87842236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.296296
3	87842241	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
3	87842248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.555556
3	87842262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
3	87842265	A->G	+	.	.	.	Intergenic	.	.	Alu	0.814815
3	87842266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
3	87842297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
3	87842300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.533333
3	87842302	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
3	87842338	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	87842361	A->G	+	.	.	.	Intergenic	.	.	Alu	0.68
3	87842373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.407407
3	87842405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
3	87842409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	87842424	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
3	87842436	A->G	+	.	.	.	Intergenic	.	.	Alu	0.631579
3	87864671	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	87864802	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	87864816	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
10	87891612	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.181818
10	87891613	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.2
10	87891675	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0869565
10	87891708	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0833333
10	87891739	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0869565
3	87937660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
3	87937677	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
3	87937738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	87937740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	87937803	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	87937826	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
3	87937830	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
4	88016699	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.35
4	88016733	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	88016735	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.176471
4	88016751	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.125
4	88016770	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.25
4	88016799	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.157895
4	88016801	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.105263
4	88016802	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.111111
4	88016827	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.1
4	88016840	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.285714
4	88017092	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.363636
4	88017095	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.3
4	88025584	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.0833333
3	88089020	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.190476
3	88089025	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.52381
3	88089035	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	88400892	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.307692
9	88400902	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.2
9	88400928	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.363636
9	88407202	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.214286
4	88602199	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.545455
4	88602352	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.133333
4	88602362	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.375
4	88602514	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.166667
4	88602536	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.3125
4	88602552	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.125
4	88602748	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.636364
1	88857928	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	88863937	A->G	-	ENSG00000081189	MEF2C	protein_coding	Intergenic	.	.	Alu	0.0434783
14	89177149	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.111111
14	89177175	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.153846
16	89368292	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.272727
14	89392765	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	89467716	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.125
14	89467734	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.133333
14	89467736	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.380952
14	89467922	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.125
14	89467923	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.266667
16	89477258	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.0869565
16	89477265	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.12
14	89510820	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.142857
14	89510831	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.117647
16	89516745	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.181818
16	89516750	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.3
14	89584866	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.0769231
14	89584877	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.08
14	89584980	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.117647
1	89651408	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.2
12	89652928	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.157895
12	89652937	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.117647
16	89735615	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.25
16	89735628	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.230769
16	89735629	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.142857
16	89735636	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.384615
16	89735649	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.166667
16	89735650	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.153846
16	89736030	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.7
16	89736125	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.153846
16	89736137	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.142857
16	89786001	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.818182
16	89786157	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.25
16	89790865	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.2
16	89790932	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.4
16	89790968	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.692308
16	89790974	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.833333
16	89790978	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.416667
16	89803720	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.2
16	89803865	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.153846
16	89803900	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.2
6	89816807	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.5
6	89816813	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.2
6	89816839	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.1875
6	89816879	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.266667
6	89816880	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.25
16	89886619	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.230769
16	89886790	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.115385
16	89886858	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.545455
6	90013713	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.545455
6	90014701	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.2
15	90082829	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
15	90082856	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
15	90082885	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
15	90082926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
6	90141363	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.125
6	90242942	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.130435
6	90242945	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.173913
6	90242948	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.142857
6	90242976	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	90242977	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	90243012	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.133333
6	90243017	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.241379
6	90243018	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	90243044	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.166667
6	90247368	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	90247428	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.25
6	90247448	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.2
6	90247456	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.181818
6	90247508	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.133333
6	90283444	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.133333
6	90283514	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.263158
6	90283520	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.357143
6	90283540	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.230769
6	90283550	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.222222
6	90283552	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.157895
6	90283553	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.105263
6	90283559	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.117647
6	90283612	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.2
14	90284406	A->G	-	ENSG00000119720	NRDE2	protein_coding	Intergenic	.	.	Alu	0.2
7	90612595	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.25
7	90612596	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	90612625	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.133333
7	90612651	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.307692
7	90612652	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.230769
7	90612661	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
14	90622185	A->G	-	ENSG00000165914	TTC7B	protein_coding	Intergenic	.	.	Alu	0.2
4	90932567	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.166667
4	90932641	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.714286
4	90932642	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.846154
4	90932669	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.2
4	90932681	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.4
4	90932707	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.3
4	90932708	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.5
4	90932722	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.3
14	90957202	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.0833333
14	91056952	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.2
14	91218955	A->G	+	ENSG00000133943	DGLUCY	protein_coding	Intergenic	.	.	Alu	0.75
14	91287531	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intergenic	.	.	Alu	0.2
14	91501637	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.3
15	91959559	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.4
15	91971141	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.692308
15	91971194	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.454545
15	91971248	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.272727
15	91971274	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	1
15	91971280	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.5
10	91997899	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.133333
14	92066680	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.153846
14	92069327	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.153846
14	92088207	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.125
7	92091332	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.578947
7	92091333	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.105263
7	92091382	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.1875
7	92091421	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.214286
7	92091425	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.117647
7	92091439	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.142857
7	92091465	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.107143
7	92091466	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.428571
7	92091492	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.3
7	92091507	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.129032
7	92091518	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.1
7	92091527	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.137931
7	92091528	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.206897
14	92091846	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.631579
12	92103084	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.181818
12	92127326	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.214286
7	92220800	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.133333
7	92220803	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.142857
7	92220809	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.214286
7	92220810	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.571429
7	92220822	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.125
7	92220831	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.285714
7	92220955	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.133333
7	92220960	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.4375
7	92220961	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.333333
1	92259862	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.125
1	92259866	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.294118
1	92259872	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.1875
1	92259986	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.416667
1	92260007	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.142857
1	92273570	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.75
1	92273574	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.142857
1	92273584	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.428571
1	92273590	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.714286
1	92273650	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.3
1	92292499	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.1875
1	92292503	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.25
1	92292549	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.25
1	92292899	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.642857
1	92292947	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.285714
1	92292965	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.214286
1	92293000	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.454545
10	92300271	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
10	92300372	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.2
10	92300373	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.2
1	92345260	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	92387238	A->G	+	ENSG00000106809	OGN	protein_coding	Intergenic	.	.	Alu	0.692308
9	92442142	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.4
9	92442208	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.333333
9	92442222	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.2
9	92442277	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.333333
9	92442278	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.166667
9	92442313	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.117647
9	92442728	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.416667
9	92442734	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.3
9	92453895	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.166667
9	92497467	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.307692
9	92497469	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.307692
9	92497495	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.307692
9	92497503	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.153846
9	92497504	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.153846
9	92525092	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.166667
9	92525116	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.454545
9	92525197	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.363636
9	92525211	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.2
9	92525233	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.2
9	92543225	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.181818
7	92573246	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.153846
7	92573260	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.08
7	92573266	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.2
7	92573315	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.0909091
7	92573422	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.0555556
7	92573427	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.151515
7	92573428	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.129032
10	92670176	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
10	92670219	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
10	92670220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
10	92671103	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
10	92671104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
10	92671109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
10	92671150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
10	92671213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
10	92671282	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	92671456	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
10	92671485	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
7	92673942	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.133333
7	92711633	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0555556
7	92711660	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.789474
7	92711675	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0487805
7	92711732	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0465116
7	92711735	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0888889
7	92711736	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.26087
7	92711737	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0454545
7	92711763	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0967742
7	92711764	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.666667
7	92711771	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0967742
7	92711994	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.764706
7	92711999	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.545455
7	92712030	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.2
7	92712039	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.105263
7	92712073	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.285714
7	92872152	A->G	+	ENSG00000237819	AC002454.1	antisense	Intergenic	.	.	Alu	0.3
15	92889185	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0384615
15	92889208	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0298507
15	92889234	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.131579
15	92889243	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0285714
15	92889276	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0625
15	92889277	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.123457
15	92889281	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.345679
15	92889329	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0441176
15	92889345	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0493827
15	92889355	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.4
15	92889365	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.134021
15	92889396	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0526316
15	92889397	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.04
15	92889408	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.08
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0892857
15	92889426	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.107143
15	92890794	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	92890816	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.192308
7	92931751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
7	92931752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	92931785	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
7	92931786	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	92931791	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
7	92931817	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
7	92931827	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
7	92931870	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
1	93086344	A->G	+	ENSG00000143033	MTF2	protein_coding	Intergenic	.	.	Alu	0.3
1	93086385	A->G	+	ENSG00000143033	MTF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	93086386	A->G	+	ENSG00000143033	MTF2	protein_coding	Intergenic	.	.	Alu	0.230769
1	93156589	A->G	+	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.2
1	93156610	A->G	+	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.133333
1	93156626	A->G	+	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.25
1	93334135	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.272727
1	93334136	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.636364
1	93334141	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.545455
1	93334155	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.133333
1	93334178	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.125
1	93334184	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.1
1	93334201	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.473684
1	93334357	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.08
1	93334843	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	93337079	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
5	93707712	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.230769
5	93707754	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.416667
11	93720832	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.363636
11	93748890	A->G	+	ENSG00000166012	TAF1D	protein_coding	Intergenic	.	.	Alu	0.214286
11	93748891	A->G	+	ENSG00000166012	TAF1D	protein_coding	Intergenic	.	.	Alu	0.153846
11	93787319	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.153846
5	93918601	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	94050215	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.181818
9	94774149	A->G	+	ENSG00000148120	C9orf3	protein_coding	Intergenic	.	.	Alu	0.363636
9	94774151	A->G	+	ENSG00000148120	C9orf3	protein_coding	Intergenic	.	.	Alu	0.181818
9	94848308	A->G	+	ENSG00000148120	C9orf3	protein_coding	Intergenic	.	.	Alu	0.2
8	94970176	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	Intergenic	.	.	Alu	0.125
8	94970200	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	Intergenic	.	.	Alu	0.133333
8	94970207	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	Intergenic	.	.	Alu	0.214286
8	94972689	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	Intergenic	.	.	Alu	0.25
8	94972705	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	Intergenic	.	.	Alu	0.2
8	94977438	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	Intergenic	.	.	Alu	0.166667
9	95020732	A->G	+	ENSG00000148120	C9orf3	protein_coding	Intergenic	.	.	Alu	0.166667
12	95057237	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.142857
12	95057242	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.142857
12	95057269	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.142857
12	95057324	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.3
12	95476252	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	95476287	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.266667
12	95476291	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.230769
12	95476356	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.2
12	95476409	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.181818
12	95482983	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.153846
12	95482984	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	95824190	A->G	+	ENSG00000166037	CEP57	protein_coding	Intergenic	.	.	Alu	0.0487805
10	96140721	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.25
12	96226047	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.2
12	96327710	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96355501	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.357143
12	96355543	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.111111
12	96355556	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.307692
9	96415166	A->G	-	ENSG00000165244	ZNF367	protein_coding	Intergenic	.	.	Alu	0.0645161
9	96416306	A->G	-	ENSG00000165244	ZNF367	protein_coding	Intergenic	.	.	Alu	0.153846
14	96553563	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.125
14	96553566	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.166667
14	96553642	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.347826
1	96725825	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	96725897	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.2
1	96725898	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.2
1	96725954	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.3125
1	96725960	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	96725964	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.272727
1	96725992	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	96726019	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.25
1	96726020	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	96726032	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	96797955	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	96798219	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.285714
1	96798220	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.47619
1	96798253	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.125
1	96798263	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.125
1	96798285	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	96798286	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.428571
1	96798299	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.153846
2	96807717	A->G	+	ENSG00000158158	CNNM4	protein_coding	Intergenic	.	.	Alu	0.166667
10	96865771	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	96888120	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	96888187	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96888188	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96888189	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.181818
10	96888244	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
9	96946237	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intergenic	.	.	Alu	0.2
9	96946263	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intergenic	.	.	Alu	0.5
9	96946283	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intergenic	.	.	Alu	0.2
10	97376277	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.230769
10	97376300	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97376307	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.272727
10	97376940	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.285714
10	97376948	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97377017	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.666667
10	97377018	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.25
10	97377020	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.545455
X	97438027	A->G	+	ENSG00000147202	DIAPH2	protein_coding	Intergenic	.	.	Alu	0.846154
1	97662139	A->G	-	ENSG00000188641	DPYD	protein_coding	Intergenic	.	.	Alu	0.3
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	97729727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
8	97779556	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.142857
8	97779575	A->G	+	ENSG00000104341	LAPTM4B	protein_coding	Intergenic	.	.	Alu	0.181818
9	97898968	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	97971501	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.625
7	97971506	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
8	98043353	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.0740741
8	98043398	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.05
8	98043405	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.268293
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.707317
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.790698
9	98115254	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.166667
12	98526749	A->G	+	ENSG00000120802	TMPO	protein_coding	Intergenic	.	.	Alu	0.2
5	98884771	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.230769
5	98918186	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.5
5	98918202	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
8	99303160	A->G	+	ENSG00000132549	VPS13B	protein_coding	Intergenic	.	.	Alu	0.2
13	99318237	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.9
13	99318635	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.4
13	99318642	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.181818
13	99318700	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.636364
13	99318706	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.4
13	99318710	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.9
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.2
2	99407174	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.178571
2	99407180	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.16
2	99407191	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.913043
2	99407194	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	99407265	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.166667
2	99407266	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.172414
2	99407267	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.115385
2	99407272	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.153846
2	99407408	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.272727
2	99407465	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.9375
2	99407466	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.9375
2	99407469	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.133333
2	99411509	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.266667
2	99411535	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.142857
2	99411544	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.153846
2	99411555	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.3
2	99411571	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.166667
6	99455950	A->G	+	ENSG00000123552	USP45	protein_coding	Intergenic	.	.	Alu	0.3
7	99483520	A->G	+	ENSG00000198556	ZNF789	protein_coding	Intergenic	.	.	Alu	0.181818
7	99497313	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.7
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.6
6	99556809	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.272727
2	99618373	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.153846
2	99639785	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.272727
2	99643127	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	99643235	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.105263
2	99703758	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.0689655
2	99718972	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.142857
2	99719001	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.235294
2	99719030	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.133333
3	99832792	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.8
3	99832795	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	99896714	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.153846
2	99896800	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.181818
2	99993985	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.181818
2	99996509	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.130435
1	100003265	A->G	+	ENSG00000117620	SLC35A3	protein_coding	Intergenic	.	.	Alu	0.25
2	100038991	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.272727
12	100091157	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.117647
12	100136839	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.363636
12	100136909	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.4
12	100136944	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0606061
12	100136989	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.08
12	100136990	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.08
12	100136993	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0769231
12	100137014	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.48
12	100137018	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0740741
9	100183670	A->G	+	ENSG00000119509	INVS	protein_coding	Intergenic	.	.	Alu	0.142857
9	100183676	A->G	+	ENSG00000119509	INVS	protein_coding	Intergenic	.	.	Alu	0.153846
14	100270573	A->G	+	ENSG00000100811	YY1	protein_coding	Intergenic	.	.	Alu	0.125
7	100278624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	100284354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
7	100284426	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
7	100284454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	100284456	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	100286333	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.2
14	100302183	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.2
14	100302292	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.125
14	100302634	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.7
7	100319088	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intergenic	.	.	Alu	0.0833333
7	100319112	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intergenic	.	.	Alu	0.117647
12	100322713	A->G	+	ENSG00000136021	SCYL2	protein_coding	Intergenic	.	.	Alu	0.222222
13	100453466	A->G	+	ENSG00000175198	PCCA	protein_coding	Intergenic	.	.	Alu	0.181818
13	100623512	A->G	-	ENSG00000125247	TMTC4	protein_coding	Intergenic	.	.	Alu	0.6
10	100952427	A->G	+	ENSG00000119906	SLF2	protein_coding	Intergenic	.	.	Alu	0.181818
10	100952467	A->G	+	ENSG00000119906	SLF2	protein_coding	Intergenic	.	.	Alu	0.166667
10	100952468	A->G	+	ENSG00000119906	SLF2	protein_coding	Intergenic	.	.	Alu	0.153846
10	100952472	A->G	+	ENSG00000119906	SLF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	101041541	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.142857
4	101041542	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.166667
4	101041563	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.142857
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.047619
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0434783
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0540541
15	101284563	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.363636
15	101284608	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.5
2	101288456	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101288457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
X	101394236	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intergenic	.	.	Alu	0.3
3	101567337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	101586024	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.133333
3	101586077	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.157895
3	101586096	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.142857
3	101663078	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.5
3	101684304	A->G	-	ENSG00000114391	RPL24	protein_coding	Intergenic	.	.	Alu	0.214286
3	101684334	A->G	-	ENSG00000114391	RPL24	protein_coding	Intergenic	.	.	Alu	0.181818
3	101684335	A->G	-	ENSG00000114391	RPL24	protein_coding	Intergenic	.	.	Alu	0.0909091
3	101691309	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	101691315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	101691323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	101691326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	101691339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	101790349	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.205882
10	101790365	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.538462
10	101790369	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.433333
10	101790370	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0857143
10	101790397	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.121951
10	101790410	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0487805
10	101790437	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0769231
10	101790470	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.05
10	101790471	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0512821
10	101790480	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.153846
10	101790495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.125
10	101790496	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0606061
10	101790504	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0789474
10	101790528	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0526316
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.212121
10	101790549	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.275862
10	101790550	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.344828
7	101833448	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.1875
7	101833461	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.181818
7	101833509	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.181818
7	101847938	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.2
10	101966252	A->G	-	ENSG00000120029	ARMH3	protein_coding	Intergenic	.	.	Alu	0.105263
7	102092793	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.4
7	102092845	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.2
7	102117330	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.111111
7	102139114	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.166667
7	102139165	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.3
7	102144961	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.181818
7	102144967	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.25
14	102163508	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.272727
14	102163548	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.2
7	102207978	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.181818
7	102223785	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.545455
4	102338220	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.0769231
8	102358899	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
7	102384229	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.181818
7	102385689	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.125
7	102385719	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.125
7	102399890	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.2
7	102400199	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102604990	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102705853	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.533333
14	102705917	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102705939	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
10	103108927	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103108997	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103109051	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.363636
10	103109068	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103109140	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103116659	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.310345
10	103116667	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103116793	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103118424	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103118485	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	103118495	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	103118521	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103118522	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.08
10	103118533	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.105263
10	103118553	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103143528	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103143533	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.529412
10	103143534	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.470588
10	103143542	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103143868	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103166755	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103167196	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103170728	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103178285	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178421	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178437	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.5
10	103178445	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.230769
10	103178588	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178598	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.6
10	103178607	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178638	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103178665	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.666667
10	103178767	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103179054	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.388889
10	103179057	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.315789
10	103179086	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103179087	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0689655
10	103179104	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.285714
10	103179113	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.172414
10	103179122	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.116279
10	103179152	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0425532
10	103179156	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.456522
10	103179162	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0810811
10	103179176	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103179184	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0645161
10	103179189	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.233333
10	103179197	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0666667
10	103179203	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0882353
10	103179219	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0731707
10	103179226	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.175
10	103179238	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0555556
10	103179589	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103189754	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103189765	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.363636
10	103189766	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103189801	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103189838	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
14	103494361	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.461538
14	103682191	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.125
14	103682192	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.133333
14	103682193	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.625
14	103682223	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.176471
14	103682249	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.857143
14	103682255	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.44
14	103682263	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.0740741
14	103682291	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.111111
14	103682325	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.166667
14	103682633	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.1875
14	103682639	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.125
12	103936432	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.125
12	103936540	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.166667
12	103974810	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.2
12	103974935	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.454545
12	104460533	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0740741
12	104460544	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0571429
12	104461935	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0434783
12	104480390	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0952381
12	104544003	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0285714
12	104544049	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0925926
12	104544628	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0689655
12	104545874	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.416667
12	104545882	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.25
12	104556816	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104556892	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104556893	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104556920	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0952381
12	104556938	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0740741
12	104559479	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104559487	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.333333
12	104559488	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.5
12	104559527	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104559528	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.4
12	104559567	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.272727
12	104559578	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.466667
12	104559604	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104559675	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.636364
12	104559692	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104559695	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.333333
12	104637184	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.05
12	104685985	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.307692
12	104685995	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.176471
12	104686031	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104686036	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.388889
12	104686046	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.294118
12	104686106	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104686171	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0645161
12	104696382	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	104696436	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0740741
12	104696537	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0327869
12	104696587	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0512821
12	104696607	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0540541
7	104946021	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.125
7	104987392	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.181818
7	104987464	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.133333
7	105007910	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.4
7	105019920	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0377358
7	105019921	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.04
7	105031632	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105031815	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105031947	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105031961	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.333333
7	105032005	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.193548
7	105032313	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105032323	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105032341	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.157895
7	105070453	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.15
7	105070513	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	105070719	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.214286
7	105073341	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0444444
7	105273563	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.428571
7	105350269	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.285714
7	105350272	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.214286
7	105350653	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.25
7	105350663	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.3
4	105374934	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.363636
4	105374951	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.428571
4	105374952	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.428571
4	105374959	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.117647
4	105374971	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.142857
14	105523945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	107441850	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.181818
12	107441860	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.190476
12	107503512	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.2
12	107503672	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.272727
3	107592281	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.142857
6	107938770	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.142857
6	107938784	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107938805	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.3
6	107938806	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
5	108163565	A->G	-	ENSG00000145743	FBXL17	protein_coding	Intergenic	.	.	Alu	0.2
8	108218826	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.1875
8	108218872	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.0952381
8	108226468	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.3
8	108226469	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.5
11	108286225	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.153846
11	108286228	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.416667
11	108286233	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.2
11	108286262	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.125
11	108286263	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.2
7	108505491	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.153846
7	108505501	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.333333
7	108505556	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.272727
7	108505582	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.294118
6	108600359	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.2
6	108600426	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.25
6	108600427	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.421053
6	108600479	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.461538
6	108600496	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.266667
6	108600497	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.25
6	108600507	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.153846
12	108651939	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.230769
1	108911879	A->G	-	ENSG00000274068	AL449266.1	protein_coding	Intergenic	.	.	Alu	0.363636
1	108942981	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.142857
1	108942984	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.266667
1	108942988	A->G	-	ENSG00000121940	CLCC1	protein_coding	Intergenic	.	.	Alu	0.2
9	109058129	A->G	-	ENSG00000106771	TMEM245	protein_coding	Intergenic	.	.	Alu	0.181818
9	109058139	A->G	-	ENSG00000106771	TMEM245	protein_coding	Intergenic	.	.	Alu	0.25
1	109405602	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.153846
1	109408793	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.125
1	109408811	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.157895
1	109409289	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.2
4	109484573	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.0869565
4	109484587	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.125
4	109500465	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.1875
4	109500469	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.157895
4	109527594	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.153846
5	109800027	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.153846
1	109812407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	109941945	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.4
12	109941949	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.5
12	109976042	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.214286
9	110245730	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.117647
9	110245943	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.378378
9	110245964	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0952381
9	110245965	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.208333
9	110245982	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0606061
9	110246029	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.347826
12	110319134	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.181818
1	110352527	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.692308
1	110352533	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.25
1	110352549	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.285714
1	110352550	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.294118
1	110352572	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	110352597	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.466667
1	110352624	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.8
1	110353267	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
1	110362436	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
1	110362450	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.3
1	110367575	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.4
12	110448057	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.111111
12	110448062	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.111111
12	110448078	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.105263
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.631579
12	110448139	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.352941
12	110497309	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.153846
12	110497313	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.363636
12	110497355	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.48
12	110497381	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.190476
12	110497384	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.130435
12	110497385	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.0909091
12	110497420	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.473684
12	110497421	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.157895
12	110497444	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.25
12	110497489	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.0769231
12	110497490	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.131579
12	110498057	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.7
12	110498068	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.2
12	110498104	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.117647
12	110498109	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.411765
12	110498110	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.176471
12	110498136	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.157895
12	110498175	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.133333
10	110587533	A->G	+	ENSG00000108055	SMC3	protein_coding	Intergenic	.	.	Alu	0.133333
10	110587539	A->G	+	ENSG00000108055	SMC3	protein_coding	Intergenic	.	.	Alu	0.166667
6	110714898	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.210526
6	110715007	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.2
6	110791918	A->G	-	ENSG00000155111	CDK19	protein_coding	Intergenic	.	.	Alu	0.153846
13	110895325	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
13	110897198	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.152174
13	110897260	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0481928
13	110897279	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
13	110897361	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.06
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.53125
6	110897725	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	110898006	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
6	110898035	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	110898061	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110898067	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	110898075	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
6	110898102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	110898103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.216418
13	110898665	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0454545
13	110898675	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0510949
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.150602
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.12
13	110898701	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0263158
13	110898852	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.047619
13	110898864	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.05
13	110898870	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0851064
13	110898888	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.03125
13	110898893	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0615385
13	110898894	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.031746
13	110898927	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0652174
13	110898930	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.205128
13	110898936	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0789474
13	110899013	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0689655
13	110899024	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.333333
13	110899029	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.388889
13	110899030	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.114286
13	110899955	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.133333
13	110899961	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.307692
13	110899967	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.214286
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.6875
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.4
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.75
13	110900044	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.2
6	110910813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
6	110912195	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110912427	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	110912447	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
6	110912474	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
6	110912476	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
1	110914592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110916531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	110916533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	110916534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
7	111195982	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.4
7	111195983	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.4
13	111207238	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.3
7	111214439	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.2
6	111271676	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
6	111271682	A->G	+	.	.	.	Intergenic	.	.	Alu	0.444444
6	111271683	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
6	111271728	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	111271848	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
6	111271849	A->G	+	.	.	.	Intergenic	.	.	Alu	0.846154
6	111271883	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	111271912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
6	111272072	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	111272102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	111272103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
6	111272106	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	111272115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
6	111272142	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
6	111292831	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	111292986	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
6	111303639	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.153846
6	111318226	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.238095
12	111467360	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.272727
12	111467365	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.25
6	111489456	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.2
6	111489520	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.142857
6	111553565	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.272727
6	111553575	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.2
6	111553578	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.5
12	111574631	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.4
12	111574646	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.153846
12	111574650	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.454545
12	111574678	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.2
2	111826753	A->G	-	ENSG00000153107	ANAPC1	protein_coding	Intergenic	.	.	Alu	0.111111
11	111854407	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.3
11	112239126	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.117647
11	112239130	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.117647
11	112239137	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.1
9	112256691	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	112256755	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.166667
9	112256763	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.125
9	112256774	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	112256795	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.181818
9	112256798	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.545455
9	112256809	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.6
9	112302656	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.3
9	112302713	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.1875
9	112302726	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.294118
9	112302727	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.125
7	112343799	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.133333
3	112565657	A->G	+	ENSG00000138459	SLC35A5	protein_coding	Intergenic	.	.	Alu	0.181818
2	112578993	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	112579087	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
2	112579088	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
2	112579093	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
1	112623431	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.1875
1	112624354	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.08
1	112624406	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112624423	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.111111
1	112663571	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112663601	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	112663996	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.103448
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.73913
1	112664050	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.578947
1	112664056	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112664111	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112664117	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.130435
1	112664121	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.210526
1	112664152	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112664157	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.294118
10	113076207	A->G	+	ENSG00000148737	TCF7L2	protein_coding	Intergenic	.	.	Alu	0.2
10	113076249	A->G	+	ENSG00000148737	TCF7L2	protein_coding	Intergenic	.	.	Alu	0.2
3	113497827	A->G	-	ENSG00000163611	SPICE1	protein_coding	Intergenic	.	.	Alu	0.3
1	113706980	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.04
1	113716437	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.03125
1	113716442	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0350877
1	113716452	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0612245
1	113716455	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.08
1	113716577	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0526316
1	113716625	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.111111
1	113716631	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0526316
1	113723263	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.153846
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0857143
3	113729082	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0882353
3	113729110	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.172414
3	113729199	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
3	113729671	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.105263
3	113729752	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0909091
3	113729804	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.285714
1	113732975	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.105263
1	113732994	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.136364
1	113733035	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.133333
1	113733104	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	113748251	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	113750115	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.153846
1	113750256	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.4
1	113752512	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.08
1	113752651	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.2
1	113752656	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.2
2	113753307	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.230769
2	113753370	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0909091
2	113753371	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.15
2	113753372	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0909091
2	113753393	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113753395	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113753419	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.357143
1	113753517	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	113753525	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	113753566	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	113753785	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.142857
1	113753920	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	113754219	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.266667
1	113754316	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.3
2	113949120	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113949122	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113949123	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.208333
2	113949213	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0645161
2	113949231	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0512821
2	113949257	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0789474
2	113949631	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.133333
3	114062262	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.727273
3	114062271	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.2
11	114119144	A->G	+	ENSG00000109906	ZBTB16	protein_coding	Intergenic	.	.	Alu	0.2
13	114258867	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.545455
13	114258951	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.538462
13	114258955	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.153846
13	114258978	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.235294
13	114284283	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intergenic	.	.	Alu	0.117647
3	114346764	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.133333
3	114346826	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.2
3	114477656	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.142857
12	115943021	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	115943035	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
12	115943062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
12	115943068	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
12	115943072	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	115943106	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
12	116146325	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	116146392	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116146401	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116160710	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1
12	116165420	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116165427	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	1
12	116165436	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.105263
12	116165442	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.111111
12	116165452	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0952381
12	116165469	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116165471	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.347826
12	116165531	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.217391
12	116165558	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116253865	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.117647
12	116253924	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116253928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.26087
12	116253929	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.130435
12	116253931	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116253993	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.15
11	116922979	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	116922982	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	116923028	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.206897
11	116923045	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.282051
11	116923073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	116923081	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	116923098	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	116923119	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0526316
11	116940298	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	116947595	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	116948544	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	116995033	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.294118
11	116995462	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.818182
11	116995536	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	116995537	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.266667
11	116999667	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	117012948	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117027631	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	117063648	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117063706	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.227273
11	117063707	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.190476
11	117063733	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117063763	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117063838	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117065794	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117065798	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117065833	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117065911	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117066132	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.121951
11	117066180	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0810811
11	117066206	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.216216
11	117066207	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.075
11	117066271	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.103448
11	117070351	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.04
11	117070356	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0535714
11	117070369	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0444444
11	117070404	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	117070405	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117070413	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.175
11	117070414	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.171429
11	117070415	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.735294
11	117070499	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0857143
11	117070514	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0689655
11	117070568	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.103448
11	117070571	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	117070578	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.275862
11	117070849	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0512821
11	117070890	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0465116
11	117070957	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117071892	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117075680	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.121951
11	117075724	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117075748	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0487805
11	117075945	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0555556
11	117076052	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	117076128	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0857143
1	117082987	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.227273
1	117082988	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	117083076	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.222222
1	117083079	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.125
1	117083080	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.117647
1	117083091	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.133333
1	117083121	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.727273
11	117085169	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3125
11	117085264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.4375
11	117085343	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117085354	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
12	117182276	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.181818
12	117182636	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.166667
12	117182700	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.235294
12	117182701	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.125
12	117183011	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.181818
12	118146378	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
12	118146382	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
12	118146392	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
12	118146418	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
12	118146426	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
12	118146518	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
12	118193105	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118193114	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	118193186	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118193192	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.307692
12	118194847	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.307692
12	118194877	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118194886	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118194952	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	118194997	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.285714
12	118194998	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	118195026	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.307692
12	118219692	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118219822	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118220159	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118229211	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.263158
12	118315059	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.111111
12	118351985	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.238095
12	118352046	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0689655
12	118352056	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	118352287	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.214286
12	118356415	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.130435
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.3
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.25
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.482759
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.518519
X	118531374	A->G	+	ENSG00000147251	DOCK11	protein_coding	Intergenic	.	.	Alu	0.3
4	118612891	A->G	+	ENSG00000260404	AC110079.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
X	118692351	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
X	118692513	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	118692516	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
X	118692519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	118692707	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
X	118692708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
X	118692710	A->G	+	.	.	.	Intergenic	.	.	Alu	0.592593
X	118692718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
X	118692750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.241379
X	118692776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	118692786	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
X	118692836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	118692854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.52381
11	119001829	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.2
11	119001831	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.2
11	119001962	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.4
11	119001968	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.181818
11	119001977	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.181818
11	119002014	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.333333
10	119062875	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0740741
10	119062876	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119062949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.15
X	119820009	A->G	-	ENSG00000125351	UPF3B	protein_coding	Intergenic	.	.	Alu	0.3
X	119827869	A->G	-	ENSG00000125351	UPF3B	protein_coding	Intergenic	.	.	Alu	0.3
X	119828015	A->G	-	ENSG00000125351	UPF3B	protein_coding	Intergenic	.	.	Alu	0.111111
8	120052558	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.2
8	120052876	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.230769
8	120052885	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.266667
12	120544455	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.333333
12	120544550	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.2
12	120556410	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.25
12	120556969	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.125
12	120557013	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.363636
12	120557023	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.333333
12	120557029	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.181818
12	120568124	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.3
12	120568170	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.181818
8	120590824	A->G	-	ENSG00000172164	SNTB1	protein_coding	Intergenic	.	.	Alu	0.181818
9	120775100	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.333333
9	120775125	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.454545
9	120840748	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.25
12	120863734	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.125
9	121082823	A->G	+	ENSG00000119397	CNTRL	protein_coding	Intergenic	.	.	Alu	0.117647
12	121321186	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.166667
12	121321189	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.2
12	121321197	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.2
12	121321493	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.153846
12	121335238	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.0909091
12	121335262	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.384615
12	121335263	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.214286
12	121335304	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.25
12	121335348	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.166667
12	121335441	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.818182
12	121424530	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.285714
12	121424531	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.333333
12	121424581	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.181818
12	121424650	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.181818
3	121507975	A->G	-	ENSG00000051341	POLQ	protein_coding	Intergenic	.	.	Alu	0.272727
3	121507991	A->G	-	ENSG00000051341	POLQ	protein_coding	Intergenic	.	.	Alu	0.2
3	121831311	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.133333
3	121832395	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.333333
12	122034697	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.363636
7	122074935	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
7	122075146	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	122075147	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
12	122412142	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.9
12	122627929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.9
12	122627961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	122817175	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.454545
9	122817187	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.166667
9	122901756	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.3
9	122901771	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.0869565
9	122901785	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.222222
9	122901826	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.133333
9	122901831	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.3125
10	123001144	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.363636
8	123032921	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.133333
8	123032924	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.25
8	123032925	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.105263
8	123032942	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.75
8	123032961	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.1
8	123032983	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	123033000	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.8
8	123033138	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.212121
12	123051995	A->G	-	ENSG00000090975	PITPNM2	protein_coding	Intergenic	.	.	Alu	0.166667
9	123095641	A->G	+	ENSG00000011454	RABGAP1	protein_coding	Intergenic	.	.	Alu	0.3
12	123213060	A->G	-	ENSG00000051825	MPHOSPH9	protein_coding	Intergenic	.	.	Alu	0.5
9	123248406	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.142857
9	123256156	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.133333
9	123256246	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.181818
12	123323418	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.411765
12	123323493	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.133333
8	123344484	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.25
12	123348877	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.181818
8	123350857	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	123405254	A->G	-	ENSG00000183955	KMT5A	protein_coding	Intergenic	.	.	Alu	0.166667
12	123405623	A->G	-	ENSG00000183955	KMT5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	123419200	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123419879	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123419964	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	123421832	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123421940	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.233333
12	123421941	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	123422110	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.3
12	123422114	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.3
2	123745102	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	123904152	A->G	+	ENSG00000188580	NKAIN2	protein_coding	Intergenic	.	.	Alu	0.142857
X	123972841	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.142857
X	123972842	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.142857
X	123972942	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.166667
6	124371516	A->G	+	ENSG00000188580	NKAIN2	protein_coding	Intergenic	.	.	Alu	0.153846
9	124382014	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.0769231
9	124382038	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.2
9	124382424	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.157895
9	124382445	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.181818
9	124382483	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.214286
6	124398090	A->G	+	ENSG00000188580	NKAIN2	protein_coding	Intergenic	.	.	Alu	0.2
9	124627815	A->G	-	ENSG00000148200	NR6A1	protein_coding	Intergenic	.	.	Alu	0.181818
9	124730356	A->G	-	ENSG00000148200	NR6A1	protein_coding	Intergenic	.	.	Alu	0.388889
9	124730484	A->G	-	ENSG00000148200	NR6A1	protein_coding	Intergenic	.	.	Alu	0.2
9	124730502	A->G	-	ENSG00000148200	NR6A1	protein_coding	Intergenic	.	.	Alu	0.2
10	124923474	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.125
9	125158845	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.133333
9	125158939	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.133333
9	125159163	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
9	125166650	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
8	125256740	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.2
9	125336583	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.181818
3	125363742	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.0869565
3	125363746	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.0952381
3	125363747	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.25
3	125363752	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.166667
3	125363755	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.111111
3	125363814	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.5
3	125363857	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.428571
2	127334584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.636364
2	127754709	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.166667
2	127783665	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.45
2	127783694	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127783742	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.5625
2	127783772	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.133333
2	127783785	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.111111
2	127783788	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.111111
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102041
9	127791856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.104167
9	127791858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0816327
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0612245
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
9	127791926	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
9	127791963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.216216
9	127791964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.205882
9	127791994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.189189
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	127792084	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	127792085	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	127792109	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	127792116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.21875
9	127792211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127792218	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127792313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127792385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127792392	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127794989	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.2
9	127795118	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.115385
9	127795154	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0769231
9	127795180	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.129032
9	127795197	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.105263
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1
9	127795376	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0555556
9	127795475	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0571429
9	127795482	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0857143
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.178571
2	127805216	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.190476
9	127805306	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.285714
2	127805316	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.272727
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.653846
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.84
9	127805375	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0625
9	127805398	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.15625
9	127821929	A->G	+	ENSG00000106991	ENG	protein_coding	Intergenic	.	.	Alu	0.153846
2	127883000	A->G	-	ENSG00000144233	AMMECR1L	protein_coding	Intergenic	.	.	Alu	0.181818
4	127974833	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.181818
4	127974834	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.272727
4	127974875	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.5
4	128010275	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.636364
4	128010305	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.153846
4	128010450	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.181818
4	128010484	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.166667
4	128010659	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.136364
4	128010665	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.173913
4	128010728	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.142857
4	128010735	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.333333
4	128010736	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.111111
4	128010738	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.125
4	128010759	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.153846
4	128010763	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.166667
4	128010795	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.133333
4	128010804	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.266667
4	128010841	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.5
4	128010847	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.533333
4	128010892	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.352941
4	128010893	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.153846
4	128015002	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.4
4	128015009	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.25
4	128015026	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.166667
4	128015027	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.25
4	128031346	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.142857
4	128031356	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.380952
4	128031364	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.315789
9	128469731	A->G	+	ENSG00000136811	ODF2	protein_coding	Intergenic	.	.	Alu	0.285714
9	128469739	A->G	+	ENSG00000136811	ODF2	protein_coding	Intergenic	.	.	Alu	0.25
9	128469823	A->G	+	ENSG00000136811	ODF2	protein_coding	Intergenic	.	.	Alu	0.5
7	128553310	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.115385
7	128553311	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
7	128553328	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
7	128553642	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	128572382	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	128572383	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	128572391	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
7	128572484	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	128572496	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	128574530	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	128574536	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	128633637	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	128633672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	128633804	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
7	128633817	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
7	128655713	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
7	128655714	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
7	128655750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
7	128661347	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
7	128661370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	128678635	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	128678655	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	128740654	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.5
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.333333
3	128740855	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128740856	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.294118
3	128740876	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128811721	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128811726	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128811728	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.529412
3	128811745	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
4	128965900	A->G	-	ENSG00000151466	SCLT1	protein_coding	Intergenic	.	.	Alu	0.272727
4	128965928	A->G	-	ENSG00000151466	SCLT1	protein_coding	Intergenic	.	.	Alu	0.384615
4	128965929	A->G	-	ENSG00000151466	SCLT1	protein_coding	Intergenic	.	.	Alu	0.428571
7	129705829	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.166667
7	129843131	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129843137	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	1
7	129843163	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.4
7	129873645	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
8	129910563	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129910746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.545455
8	129910748	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
9	129913913	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129913948	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.176471
9	129913964	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	1
9	129913971	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	129914012	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.12
9	129914016	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.571429
9	129914020	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129914025	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	129914026	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.09375
9	129914029	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0588235
9	129914031	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.114286
9	129914039	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.15625
9	129914072	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	129914074	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.225806
9	129914098	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0789474
9	129921462	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.15
9	129921514	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0588235
9	129925820	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129927870	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129930225	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	129930313	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129930330	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129948232	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.636364
9	129948427	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.315789
9	129950918	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.15
9	129977584	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	129977720	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
8	130001735	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
9	130014445	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	130704966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130704967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130704983	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130705073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130705092	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
9	130705267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	130705268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
9	130705388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
7	130992717	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.2
3	131008306	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.153846
3	131008346	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.153846
7	131055090	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.272727
7	131056947	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.153846
7	131056953	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.166667
5	131276237	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131276342	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.214286
5	131295006	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1875
5	131319900	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131319904	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131319930	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1875
5	131319983	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.210526
5	131319986	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.105263
5	131319992	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.117647
5	131368066	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.136364
5	131368138	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0512821
9	131399100	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
7	131418258	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	131424445	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.263158
9	131424454	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.125
9	131424500	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0769231
9	131424501	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.321429
9	131424565	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.285714
9	131424566	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131424607	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0909091
9	131424625	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131424636	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.117647
9	131426082	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0833333
9	131426100	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131426152	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0540541
9	131426157	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.135135
9	131426182	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0869565
9	131426207	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.16
9	131426211	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.296296
9	131426218	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0666667
9	131426258	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.115385
9	131426287	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131426288	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131426323	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131426324	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131448423	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.5
9	131462662	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131462731	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
5	131699490	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.133333
5	131699491	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.214286
X	131743927	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intergenic	.	.	Alu	0.909091
5	131775765	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.545455
12	131899996	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.153846
10	131903268	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.142857
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.666667
10	131903336	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.117647
10	131903373	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.444444
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.444444
10	131903387	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.266667
10	131903388	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.125
9	132338297	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.272727
5	132365735	A->G	-	ENSG00000233006	MIR3936HG	processed_transcript	Intergenic	.	.	Alu	0.153846
12	132652450	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.142857
12	132652527	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.105263
12	132652542	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.08
12	132654329	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.133333
12	132654368	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	1
12	132656487	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.416667
12	132656497	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.181818
6	132822642	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
6	132822647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	132822654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	132917845	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.105263
5	132917850	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.277778
5	132917851	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.176471
5	132917894	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.230769
5	132917903	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.133333
5	132917940	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.4
5	132920253	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132920254	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132921565	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132921580	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132921585	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132921628	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3125
5	132921644	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132921897	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.133333
5	132921905	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.210526
5	132951736	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
9	133267185	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.117647
9	133267201	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.142857
9	133267217	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.1
9	133267231	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.190476
9	133267307	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.1
9	133267654	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.285714
9	133267761	A->G	-	ENSG00000175164	ABO	protein_coding	Intergenic	.	.	Alu	0.2
8	133494986	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.214286
8	133495015	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133495016	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.133333
8	133495026	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.214286
8	133495098	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133495099	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.25
8	133495119	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.230769
8	133497565	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.125
8	133497611	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	133497652	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.117647
8	133497655	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	133497729	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.1875
8	133497735	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.111111
8	133505637	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	133505663	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.2
8	133520824	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0857143
8	133520848	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	133530367	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.105263
8	133530445	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133530446	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.25
8	133530556	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.153846
7	133694140	A->G	+	ENSG00000131558	EXOC4	protein_coding	Intergenic	.	.	Alu	0.3
7	133694150	A->G	+	ENSG00000131558	EXOC4	protein_coding	Intergenic	.	.	Alu	0.181818
7	133694167	A->G	+	ENSG00000131558	EXOC4	protein_coding	Intergenic	.	.	Alu	0.142857
5	134379535	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.115385
5	134379552	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.136364
5	134379567	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134379590	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.636364
5	134379591	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.636364
5	134382756	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134382757	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134386065	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.153846
5	134386467	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.105263
5	134386470	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.105263
5	134386481	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134386482	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134386485	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	134386512	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.230769
5	134386622	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0526316
5	134399775	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.117647
5	134399804	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.157895
5	134399980	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.153846
5	134399990	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.153846
5	134399991	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.181818
5	134744282	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.2
5	134744283	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.2
5	134848732	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.2
5	134883856	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.3
2	135196597	A->G	-	ENSG00000121988	ZRANB3	protein_coding	Intergenic	.	.	Alu	0.181818
7	135474117	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.230769
7	135479305	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.272727
7	135479347	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.428571
7	135479388	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.3
7	135479419	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.333333
7	135504424	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.0869565
7	135504433	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.142857
7	135504434	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.333333
2	135646684	A->G	+	ENSG00000048991	R3HDM1	protein_coding	Intergenic	.	.	Alu	0.545455
2	135646696	A->G	+	ENSG00000048991	R3HDM1	protein_coding	Intergenic	.	.	Alu	0.153846
2	135646698	A->G	+	ENSG00000048991	R3HDM1	protein_coding	Intergenic	.	.	Alu	0.142857
2	135646699	A->G	+	ENSG00000048991	R3HDM1	protein_coding	Intergenic	.	.	Alu	0.428571
2	135702697	A->G	+	ENSG00000048991	R3HDM1	protein_coding	Intergenic	.	.	Alu	0.333333
2	135702724	A->G	+	ENSG00000048991	R3HDM1	protein_coding	Intergenic	.	.	Alu	0.2
2	135747269	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.166667
2	135747280	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.307692
2	135748848	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.1
3	136159502	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.2
3	136396067	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136441170	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.5625
3	136441171	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.277778
3	136441228	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136441229	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.636364
3	136447746	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136447750	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.153846
6	136663682	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.307692
6	136663706	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.153846
6	136663806	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.181818
6	136663816	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.2
X	136724182	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.133333
X	136724188	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.384615
X	136724218	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.4
X	136724231	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.4375
X	136724257	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.176471
X	136724258	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.176471
X	136724259	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.235294
X	136724262	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.352941
X	136724296	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.105263
X	136724298	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.15
X	136724350	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.142857
X	136724351	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.333333
X	136724357	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.214286
X	136724359	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.142857
3	136744814	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.15
3	136744951	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136744955	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.636364
X	136844532	A->G	-	ENSG00000232611	AL683813.1	lincRNA	Intergenic	.	.	Alu	0.153846
X	136871785	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.0869565
X	136871859	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.125
X	136871860	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.125
X	136877272	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.153846
X	136877275	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.142857
X	136877527	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.2
3	136880138	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.272727
9	137207957	A->G	+	ENSG00000188566	NDOR1	protein_coding	Intergenic	.	.	Alu	0.181818
9	137207982	A->G	+	ENSG00000188566	NDOR1	protein_coding	Intergenic	.	.	Alu	0.153846
9	137208027	A->G	+	ENSG00000188566	NDOR1	protein_coding	Intergenic	.	.	Alu	0.384615
5	137879657	A->G	-	ENSG00000120729	MYOT	protein_coding	Intergenic	.	.	Alu	0.363636
5	137879663	A->G	-	ENSG00000120729	MYOT	protein_coding	Intergenic	.	.	Alu	0.2
5	137917423	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.277778
5	137923108	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.222222
5	137923162	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.217391
5	137923180	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.136364
5	137923183	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.12
5	137923211	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.117647
5	137923235	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.133333
5	137923243	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.444444
5	137923245	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.1875
5	137923253	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.411765
5	137923310	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.272727
5	137979042	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0882353
5	137979048	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0666667
5	137979109	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0645161
5	137979145	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.117647
5	137979150	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.333333
5	137979151	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0714286
5	137979177	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.318182
5	137979216	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.111111
5	137979226	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.176471
5	137981365	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.277778
5	137981366	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.117647
5	137981403	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137999192	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.166667
5	137999211	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.4
5	137999237	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.615385
5	138002346	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.466667
5	138002358	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.357143
5	138002409	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.263158
5	138002419	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.625
5	138002445	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.26087
5	138002482	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.166667
5	138002794	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.133333
5	138002798	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.263158
5	138002804	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.619048
5	138403791	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.1
5	138403811	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.142857
7	138509448	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.5
7	138509455	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.0869565
7	138509512	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.1
7	138509526	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.0769231
7	138509537	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.166667
7	138509583	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.111111
7	138509584	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.407407
7	138509593	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.25
7	138509659	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.1
5	138921745	A->G	-	ENSG00000044115	CTNNA1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138978415	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.142857
6	138984216	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.125
5	138998994	A->G	-	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.428571
4	139021265	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.3
4	139047378	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.307692
4	139047379	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.285714
4	139047388	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.384615
7	139050506	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139051196	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.117647
4	139051365	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139056522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.478261
7	139056547	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139056563	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0833333
7	139056567	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.115385
7	139056571	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0714286
7	139056579	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.190476
7	139056625	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.153846
7	139056626	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.461538
7	139056634	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.647059
7	139056658	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.294118
4	139088821	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139088826	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.466667
4	139088827	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.4375
4	139088896	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139095300	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139095329	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139096582	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
4	139096586	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.121212
4	139102963	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139103026	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.666667
7	139103323	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.210526
7	139103324	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.117647
4	139106846	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.25
4	139106865	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1
4	139106881	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139106882	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.176471
4	139106949	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0833333
4	139114447	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.277778
4	139114452	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.105263
4	139114457	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.15
4	139114486	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139114487	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
5	139284349	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.238095
5	139284351	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	139284352	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.107143
5	139284487	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.25
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.25
5	139284494	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.111111
5	139304280	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.133333
5	139304325	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.157895
5	139349527	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139349742	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.5
5	139349748	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139349841	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.08
5	139349917	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.15625
5	139350107	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139368586	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139368595	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.318182
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.4
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.6
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.333333
5	139371064	A->G	+	ENSG00000170482	SLC23A1	protein_coding	Intergenic	.	.	Alu	0.2
5	139399194	A->G	+	ENSG00000170469	SPATA24	protein_coding	Intergenic	.	.	Alu	0.1875
5	139399196	A->G	+	ENSG00000170469	SPATA24	protein_coding	Intergenic	.	.	Alu	0.176471
4	139400829	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.1
4	139400835	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0952381
4	139400894	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.153846
4	139400957	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.2
4	139407226	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.166667
7	139418898	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	139568537	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.133333
5	139590249	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139590285	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139590315	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.133333
5	139590347	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139810308	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.357143
4	139810317	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
4	139810325	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.176471
4	139810333	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.307692
4	139810366	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
4	139810371	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.166667
4	139810413	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.166667
4	139810456	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.285714
4	139863551	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.4
4	139863552	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
4	139863616	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
7	139889176	A->G	+	ENSG00000059377	TBXAS1	protein_coding	Intergenic	.	.	Alu	0.2
4	139943999	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
4	139944035	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
7	140011115	A->G	+	ENSG00000059377	TBXAS1	protein_coding	Intergenic	.	.	Alu	0.2
4	140093502	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.181818
4	140093549	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.133333
5	140469451	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.185185
5	140469452	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	140536187	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.705882
5	140536193	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.315789
5	140536194	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.421053
5	140536233	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	140536277	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	140536760	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	140536768	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	140536769	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.352941
5	140536858	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.333333
5	140536861	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.133333
5	140536900	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	140536901	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.176471
5	140536910	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.411765
5	140536923	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	140536927	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.263158
5	140536942	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.266667
5	140536946	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.363636
5	140536971	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.235294
5	140542587	A->G	+	ENSG00000213523	SRA1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140815173	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.142857
7	140815266	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.35
7	140815270	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.541667
7	140815340	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.190476
7	140815341	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0909091
7	140815347	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.538462
7	140815348	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.307692
7	140815350	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0769231
7	140815412	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0606061
7	140815417	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.28125
7	140815418	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0606061
7	140815424	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.08
7	140815466	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.111111
7	140815494	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.172414
7	140815510	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0645161
7	140815522	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.16
7	140815554	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.210526
7	140815566	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.333333
7	140821375	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.130435
8	141303130	A->G	-	ENSG00000022567	SLC45A4	protein_coding	Intergenic	.	.	Alu	0.2
3	141518336	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.571429
3	141518362	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.25
3	141518368	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.166667
3	141518376	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.5
3	141587639	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.2
3	142019193	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	142090671	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	142323370	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.3
3	142323428	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.384615
3	142323433	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.133333
3	142323454	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.142857
3	142482610	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.363636
3	142482614	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.5
3	142482615	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.4
3	142482753	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.25
3	142483056	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.117647
3	142483089	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.1
3	142483108	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.176471
3	142483127	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.105263
3	142483134	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.0952381
3	142483144	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.190476
3	142543794	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.307692
3	142543798	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.384615
3	142543808	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.75
3	142543834	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.6
6	142918061	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.166667
2	143272435	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.666667
2	143272443	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.416667
2	143272444	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.666667
2	143272532	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.733333
2	143272533	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	1
2	143272578	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.363636
2	143272598	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143272604	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.454545
2	143272605	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.25
2	143372221	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.05
2	143372238	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0571429
2	143373375	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.315789
2	143373376	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.648649
2	143373419	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0909091
2	143373422	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.75
2	143373445	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0769231
2	143373452	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.121951
2	143373464	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0555556
2	143373480	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.1
2	143373483	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.151515
2	143373509	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	1
2	143373515	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.5
2	143373575	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.136364
2	143373584	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.142857
2	143374569	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143374642	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.230769
2	143605750	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.6
2	143605827	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.190476
2	143605828	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.55
2	143605899	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.666667
2	143605915	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.25
2	143605921	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.411765
2	143605925	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.1
2	143605933	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.25
2	143605956	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.285714
2	143605957	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.15
2	143605958	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.2
4	145175995	A->G	-	ENSG00000164164	OTUD4	protein_coding	Intergenic	.	.	Alu	0.0909091
4	145176003	A->G	-	ENSG00000164164	OTUD4	protein_coding	Intergenic	.	.	Alu	0.166667
1	145774539	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.222222
1	145782014	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.30303
1	145928122	A->G	+	ENSG00000280778	AC243547.3	protein_coding	Intergenic	.	.	Alu	0.416667
5	146249466	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.153846
5	146249500	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.142857
5	146249509	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.166667
5	146249524	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.2
5	146249527	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.3
5	146249579	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.2
1	146941711	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.2
7	148869541	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	149243155	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.142857
7	149243160	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.133333
7	149243206	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.142857
7	149243210	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.214286
7	149243246	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.214286
7	149243250	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.166667
7	149243272	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.285714
7	149243295	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.117647
7	149243299	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.235294
6	149348262	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.117647
6	149348268	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.117647
6	149348331	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.2
6	149348735	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.153846
6	149349171	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.272727
6	149349237	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.333333
6	149349243	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.142857
6	149349309	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.1875
6	149349332	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.111111
6	149583210	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149583312	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149583313	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149672026	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.153846
1	149883271	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
4	150278890	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
4	150288081	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150295376	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150295379	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.411765
4	150295396	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.571429
4	150295415	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150295416	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
4	150295472	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.7
1	150309441	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
1	150309449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	150309507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.777778
1	150309516	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
1	150309562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
4	150398712	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.3
1	150565471	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
1	150565527	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.25
1	150565716	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.272727
1	150565726	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	150566339	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.416667
1	150569904	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0526316
1	150570443	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	150570810	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0625
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.113208
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.145161
1	150570944	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0246914
1	150570981	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0243902
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.105263
1	150571318	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
1	150571325	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
1	150571962	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.125
1	150572284	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.135135
1	150572285	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0810811
1	150572324	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0243902
1	150572418	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0789474
1	150572419	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0789474
1	150598153	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	150602148	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150602185	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150602195	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150602224	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150602562	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.230769
1	150603135	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.181818
1	150605777	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.1
1	150605778	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.1
1	150606043	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150610848	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150612515	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.111111
1	150612582	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.117647
1	150612596	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.105263
1	150612597	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.105263
1	150612688	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150612689	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150613185	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.3
1	150614043	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.230769
1	150615103	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.25
1	150632109	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	150713535	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.166667
5	150713546	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.153846
5	150728938	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0769231
5	150728943	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0833333
5	150729002	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0689655
4	150738076	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.3125
4	150738083	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.15
4	150738102	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.416667
4	150738135	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.190476
4	150738169	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.117647
4	150738170	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.117647
4	150738173	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.4375
4	150864732	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150865813	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.285714
4	150865854	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150865904	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.133333
4	150865917	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.333333
1	150931021	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	150931054	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.25
1	150931179	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.25
1	150931180	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150958004	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	150958019	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	150958117	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.3
1	150958390	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.4
1	150958416	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	150958451	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	150958479	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.533333
1	150958484	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	150958500	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.1
6	150985402	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.181818
6	150985404	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.181818
6	150985421	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	150993315	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.153846
1	150993381	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.25
1	150993382	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.375
1	150993437	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.125
1	150993477	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150993488	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150993523	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150993800	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.25
1	150993836	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.142857
1	150993837	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.133333
1	150993862	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.1
1	150993898	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.26087
1	150993906	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.125
1	150993925	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.142857
4	151110685	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.148148
4	151110700	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.08
4	151110739	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151110795	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.111111
4	151110851	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.115385
4	151125315	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151126608	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151130862	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
1	151203779	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.230769
1	151223798	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	151223855	A->G	+	ENSG00000143398	PIP5K1A	protein_coding	Intergenic	.	.	Alu	0.105263
6	151245435	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.3
5	151271819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
5	151271956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	151285364	A->G	+	ENSG00000144893	MED12L	protein_coding	Intergenic	.	.	Alu	0.230769
6	151304368	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.25
6	151304369	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.416667
6	151394008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
6	151394028	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
6	151394030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
6	151397788	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
1	151434993	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.384615
1	151434997	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.230769
1	151435190	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151436094	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151436157	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.636364
1	151436159	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151436504	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.538462
1	151436511	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.214286
1	151436516	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.4
1	151436569	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.1875
1	151436604	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.384615
1	151447575	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151447736	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.142857
1	151447779	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151450062	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.0952381
1	151450065	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.238095
1	151450067	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.0952381
1	151450137	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.117647
1	151450160	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.15
1	151450170	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.428571
1	151450235	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.1875
1	151450236	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.125
1	151450444	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151450491	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151453012	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151455942	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.0952381
1	151455993	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.176471
1	151456015	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.153846
1	151456016	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.153846
7	151496918	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	1
7	151497060	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.4
7	151497061	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.5
5	151793893	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.666667
5	151793907	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.352941
5	151793934	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.0769231
7	152158644	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.176471
3	152275449	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0555556
7	152309632	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152309685	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
3	152329445	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.05
3	152329506	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.04
3	152329528	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.05
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0540541
3	152329578	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0526316
7	152405382	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152426436	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
4	152521931	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.0909091
1	153666219	A->G	-	ENSG00000143621	ILF2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154066126	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154066133	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.3
X	154066137	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.5
X	154066139	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154068936	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154068947	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154068965	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154069011	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154069046	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.176471
X	154069072	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.4375
X	154069128	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.25
X	154069152	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.111111
X	154086783	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154087668	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
1	154174587	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.272727
1	154174611	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.1875
1	154174632	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.25
1	154250689	A->G	+	ENSG00000143569	UBAP2L	protein_coding	Intergenic	.	.	Alu	0.272727
1	154250693	A->G	+	ENSG00000143569	UBAP2L	protein_coding	Intergenic	.	.	Alu	0.166667
1	154250733	A->G	+	ENSG00000143569	UBAP2L	protein_coding	Intergenic	.	.	Alu	0.416667
5	154393239	A->G	+	ENSG00000164574	GALNT10	protein_coding	Intergenic	.	.	Alu	0.2
5	154393348	A->G	+	ENSG00000164574	GALNT10	protein_coding	Intergenic	.	.	Alu	0.125
5	154393350	A->G	+	ENSG00000164574	GALNT10	protein_coding	Intergenic	.	.	Alu	0.2
5	154393354	A->G	+	ENSG00000164574	GALNT10	protein_coding	Intergenic	.	.	Alu	0.133333
6	154738064	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.428571
5	154764655	A->G	+	ENSG00000155506	LARP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	154764714	A->G	+	ENSG00000155506	LARP1	protein_coding	Intergenic	.	.	Alu	0.1
5	154764802	A->G	+	ENSG00000155506	LARP1	protein_coding	Intergenic	.	.	Alu	0.153846
6	154825745	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.111111
6	154825794	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.357143
6	154858381	A->G	+	ENSG00000146426	TIAM2	protein_coding	Intergenic	.	.	Alu	0.181818
6	154858385	A->G	+	ENSG00000146426	TIAM2	protein_coding	Intergenic	.	.	Alu	0.181818
3	155093717	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.15
3	155093735	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.384615
3	155093736	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.214286
3	155098368	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.357143
3	155098435	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.4
3	155098498	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.454545
3	155098513	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.571429
3	155107098	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.176471
3	155107100	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.125
3	155107101	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.176471
3	155107197	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.384615
3	155107232	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.5
3	155107233	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.4375
3	155107242	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.230769
3	155107328	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.222222
1	155316144	A->G	+	ENSG00000160752	FDPS	protein_coding	Intergenic	.	.	Alu	0.272727
1	155389066	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.3
1	155502167	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	155538496	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.222222
1	155684714	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	155850702	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.272727
1	155919105	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.235294
1	155919106	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.1875
1	155919143	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.125
1	155919146	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.125
1	155919171	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.615385
1	155922242	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.285714
1	155922244	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.352941
1	155922278	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0666667
1	155922284	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0967742
1	155922316	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0740741
1	155922328	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.176471
1	155922350	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	155922351	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.227273
1	155922382	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.117647
1	155922383	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.111111
1	155922387	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.380952
1	155922417	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.142857
1	155922418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.15
1	155924337	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.157895
1	155924338	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.105263
1	155924357	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.6875
1	155924373	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.307692
1	155924413	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.785714
1	155924418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.166667
1	155937122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
1	155937194	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	155937195	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	155937607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
1	155939316	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	155939511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	155939533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	155943157	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	156083185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0384615
6	156129576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
6	156129640	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
6	156129654	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0810811
6	156129667	A->G	-	.	.	.	Intergenic	.	.	Alu	0.138889
6	156129691	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0434783
6	156129769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.140625
6	156129782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.113208
6	156129783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0377358
1	156141940	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
1	156142023	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	156142040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
6	156156047	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	156156072	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
6	156185491	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
6	156185692	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	156195858	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
6	156195861	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	156195865	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
6	156195875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.179487
1	156224557	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.5
1	156224587	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.416667
6	156946079	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	157017869	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.3
6	157114361	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.133333
6	157114381	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.307692
6	157114403	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.133333
6	157114413	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.142857
6	157114417	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.142857
6	157114430	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
5	157386773	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.148148
5	157386813	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.307692
5	157386864	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.571429
5	157386865	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.25
5	157386870	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
5	157830111	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	157830961	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.117647
5	157830982	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.214286
5	157838260	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.3
5	157838261	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.3
2	157863145	A->G	-	ENSG00000115170	ACVR1	protein_coding	Intergenic	.	.	Alu	0.25
2	157863157	A->G	-	ENSG00000115170	ACVR1	protein_coding	Intergenic	.	.	Alu	0.5
2	157863206	A->G	-	ENSG00000115170	ACVR1	protein_coding	Intergenic	.	.	Alu	0.5
2	157863236	A->G	-	ENSG00000115170	ACVR1	protein_coding	Intergenic	.	.	Alu	0.181818
5	158297807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
5	158297808	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
5	158297834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	158643433	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	158643442	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.761905
2	158643449	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.727273
2	158643455	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.15
2	158643482	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.3
2	158643483	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.285714
2	158643501	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.0645161
2	158643525	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.2
2	158643529	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.470588
2	158643555	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.1875
2	158643785	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.193548
2	158643827	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.217391
2	158643846	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.321429
2	158643865	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.257143
2	158643866	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.333333
2	158643883	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.135135
2	158643895	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.363636
2	158643946	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.304348
2	158643949	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.666667
2	158643951	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.130435
2	158643957	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	158643966	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.176471
2	158643975	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.733333
2	158644000	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.181818
2	158644018	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.565217
2	158644040	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.0952381
6	158657333	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.2
3	158689634	A->G	+	ENSG00000168827	GFM1	protein_coding	Intergenic	.	.	Alu	0.727273
3	158689648	A->G	+	ENSG00000168827	GFM1	protein_coding	Intergenic	.	.	Alu	0.153846
3	158689699	A->G	+	ENSG00000168827	GFM1	protein_coding	Intergenic	.	.	Alu	0.25
7	158776967	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.37931
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	158789489	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	158789494	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158789495	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158789572	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	158792989	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.588235
7	158793041	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	158800669	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0681818
4	159237797	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159685391	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0588235
6	159685396	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0588235
6	159685407	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0857143
6	159685474	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159734197	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.153846
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.5
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.8
6	159734291	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.571429
2	159734826	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0909091
2	159734861	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0967742
2	159734888	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.178571
2	159734892	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.185185
1	159890937	A->G	-	ENSG00000213085	CFAP45	protein_coding	Intergenic	.	.	Alu	0.166667
1	159890941	A->G	-	ENSG00000213085	CFAP45	protein_coding	Intergenic	.	.	Alu	0.333333
1	160302627	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	1
1	160302693	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.102564
1	160302757	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.269231
1	160302759	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.384615
1	160302826	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.153846
1	160302988	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.333333
1	160302990	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.2
6	161078965	A->G	+	ENSG00000085511	MAP3K4	protein_coding	Intergenic	.	.	Alu	0.307692
6	161078967	A->G	+	ENSG00000085511	MAP3K4	protein_coding	Intergenic	.	.	Alu	0.307692
1	164687509	A->G	+	ENSG00000185630	PBX1	protein_coding	Intergenic	.	.	Alu	0.272727
4	165108255	A->G	-	ENSG00000170088	TMEM192	protein_coding	Intergenic	.	.	Alu	0.2
6	166977273	A->G	-	ENSG00000227598	Z94721.1	antisense	Intergenic	.	.	Alu	0.125
6	166977286	A->G	-	ENSG00000227598	Z94721.1	antisense	Intergenic	.	.	Alu	0.764706
6	167006394	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.181818
6	167009272	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.2
6	167009332	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.125
6	167009389	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	1
6	167009422	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.153846
6	167009572	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.0869565
6	167020723	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.107143
6	167020732	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.129032
6	167020733	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.0645161
6	167020747	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.0689655
6	167020788	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.15625
6	167020789	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.09375
6	167020794	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.133333
6	167020798	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.148148
2	168735771	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.125
2	168735783	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.136364
2	168735797	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.0645161
2	168735951	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.0952381
3	168891325	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	168891326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	168891466	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
3	168891476	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	168891482	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	168891486	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
3	168891500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
4	168994883	A->G	-	ENSG00000145439	CBR4	protein_coding	Intergenic	.	.	Alu	0.1
1	169153908	A->G	-	ENSG00000143156	NME7	protein_coding	Intergenic	.	.	Alu	0.153846
1	169153924	A->G	-	ENSG00000143156	NME7	protein_coding	Intergenic	.	.	Alu	0.25
5	169805141	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.153846
5	169805164	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.5
5	169805169	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.25
5	169805195	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.538462
5	169805200	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
5	169929596	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.363636
5	169929622	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
5	169929662	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	170146999	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.142857
3	170152723	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.307692
1	171492935	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.818182
2	171526102	A->G	+	ENSG00000071967	CYBRD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	171765460	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
2	171765697	A->G	+	.	.	.	Intergenic	.	.	Alu	1
2	171765734	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	171768412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
2	171768492	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
5	172112559	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.333333
5	172112698	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.230769
3	172179704	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1875
3	172179731	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172179736	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.214286
3	172179762	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.307692
3	172179772	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172179840	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172386595	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.235294
3	172386621	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172386670	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172387298	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
5	172839161	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.125
5	172839287	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.181818
4	173210010	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.166667
1	173861181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.2
2	173946982	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.2
1	174003263	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
1	174003265	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
1	174003275	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.454545
1	174003790	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.307692
1	174003800	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.285714
1	174003950	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.272727
2	174219044	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.4
3	174467406	A->G	+	ENSG00000177694	NAALADL2	protein_coding	Intergenic	.	.	Alu	0.272727
3	174467407	A->G	+	ENSG00000177694	NAALADL2	protein_coding	Intergenic	.	.	Alu	0.454545
1	175937866	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	175937908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
1	176040396	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176041456	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.615385
1	176041462	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.5
1	176041516	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176041542	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	176041552	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.3
1	176041573	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176041574	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176070433	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	176454493	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.166667
5	177066844	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.181818
5	177071423	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.117647
5	177071431	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.1875
5	177071432	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.25
5	177071440	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.125
5	177071565	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.25
3	177101130	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
2	177228008	A->G	+	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.117647
2	177228019	A->G	+	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0392157
2	177246870	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	177246871	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	177298091	A->G	-	ENSG00000213963	AC019080.1	sense_overlapping	Intergenic	.	.	Alu	0.5
5	177322593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
5	177621152	A->G	-	ENSG00000246596	AC139795.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
5	178217290	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.375
5	178217314	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.4375
5	178217346	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.2
5	178217386	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.214286
5	178217483	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.111111
5	178217489	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.0769231
5	178217680	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.259259
5	178217681	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.269231
5	178217738	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.290323
5	178217770	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.285714
5	178220061	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.4375
5	178220243	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.133333
2	178434213	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.384615
2	178435030	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.214286
2	178435031	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.307692
2	178435033	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435040	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.133333
2	178435041	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.2
2	178435110	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.1875
2	178435123	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.4
2	178435137	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.105263
2	178435145	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435156	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.454545
2	178435230	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.181818
2	178435236	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.5
2	178435240	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.117647
2	178435262	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.333333
2	178435289	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.307692
2	178435303	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.166667
2	178435308	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.642857
3	179173458	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.357143
3	179444652	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.166667
5	179529143	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
5	179529149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
5	179710806	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.0769231
5	179710936	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.214286
5	179710941	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.153846
5	179999120	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.461538
5	179999189	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.15
5	179999190	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	179999267	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.384615
5	179999302	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.272727
5	179999479	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	179999505	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	180029820	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.153846
5	180033041	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.4
5	180033046	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	180033102	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180033232	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.214286
5	180033233	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.1875
5	180033268	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.3125
5	180039455	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.105263
1	180827225	A->G	+	ENSG00000143324	XPR1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	180827252	A->G	+	ENSG00000143324	XPR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180942123	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.2
3	180942124	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.5
3	180942319	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.2
3	182906492	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.5
3	182906505	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182906530	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182906543	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182906544	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.625
3	182906589	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182906713	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.117647
3	182906839	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	182906910	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	182906911	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.105263
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.5
3	182907012	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.388889
3	182907013	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.294118
3	182907014	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182907050	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.214286
3	182907075	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	183031877	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.3
3	183031942	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.3
3	183031948	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.4
3	183646215	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0952381
3	183647240	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.142857
3	183764328	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.214286
2	184703447	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.272727
2	184703448	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.818182
3	185613783	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.142857
3	185707376	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	185707390	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.583333
2	186134070	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	186421663	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
2	186645790	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.2
2	186645815	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.181818
2	186645825	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.2
3	186945112	A->G	+	ENSG00000073849	ST6GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	186945870	A->G	+	ENSG00000073849	ST6GAL1	protein_coding	Intergenic	.	.	Alu	0.5
2	190886687	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.214286
3	194650016	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.125
3	194650017	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.235294
3	194650058	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.454545
3	194650064	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.5
3	194650113	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.111111
3	194650138	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.2
3	195321308	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.105263
3	195321325	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.15
3	195321737	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	195417050	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195417205	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195890559	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195890566	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.416667
3	195890618	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.545455
3	195890621	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.166667
3	195890685	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.214286
3	195890706	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.142857
2	196161657	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.103448
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.363636
2	196161721	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196424018	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.181818
3	196424466	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.181818
3	196482040	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.08
3	196482053	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.173913
3	196482079	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196484310	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.0666667
3	196648552	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.2
3	196655962	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.0689655
3	196906099	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196906109	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.4
3	196907218	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.157895
3	196907224	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0909091
3	196907353	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.111111
3	196911632	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.285714
3	196911690	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	196927561	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.125
2	197286513	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.272727
2	197286577	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.230769
2	197286597	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
2	197431323	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.133333
3	197873984	A->G	+	ENSG00000186001	LRCH3	protein_coding	Intergenic	.	.	Alu	0.2
1	198173357	A->G	+	ENSG00000151414	NEK7	protein_coding	Intergenic	.	.	Alu	0.2
2	200738174	A->G	+	ENSG00000284084	AOX3P-AOX2P	processed_transcript	Intergenic	.	.	Alu	0.2
2	200738243	A->G	+	ENSG00000284084	AOX3P-AOX2P	processed_transcript	Intergenic	.	.	Alu	0.2
2	200947850	A->G	-	ENSG00000115942	ORC2	protein_coding	Intergenic	.	.	Alu	0.181818
2	201133810	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.166667
1	201959880	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.153846
1	202139830	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.4
1	202139923	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.181818
1	202139929	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.153846
2	202223354	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.363636
2	202227018	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.545455
2	202235071	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	202271446	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.125
2	202271447	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.117647
2	202288660	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0833333
2	202288684	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.3125
2	202288695	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202288708	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.157895
1	202753737	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.2
2	202803152	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.181818
2	202803158	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.166667
2	202803176	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.153846
2	202803183	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.5
2	202803281	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.117647
2	203298502	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203298580	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203298658	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203298766	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203298786	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203298914	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303509	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303510	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.461538
2	203303520	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203303535	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303537	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203303546	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203303574	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303575	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303729	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.263158
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.421053
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	203303956	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203303958	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303964	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203305376	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203305382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.615385
2	203305385	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203305438	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.208333
2	203305447	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
1	205206535	A->G	-	ENSG00000133059	DSTYK	protein_coding	Intergenic	.	.	Alu	0.181818
1	205739821	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.125
1	205739831	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	205740099	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	205740114	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.291667
1	205740140	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.423077
1	205740141	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.08
1	205740167	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.222222
1	205740277	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.142857
1	205744695	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.138889
1	205744725	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.222222
1	205744729	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.26087
1	205744744	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.142857
1	205744770	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.230769
1	205744793	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.125
1	205744802	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	205744869	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	205744904	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.08
2	206068909	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1875
2	206071103	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206793142	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	206793143	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
2	207532234	A->G	+	ENSG00000118260	CREB1	protein_coding	Intergenic	.	.	Alu	0.2
2	207532235	A->G	+	ENSG00000118260	CREB1	protein_coding	Intergenic	.	.	Alu	0.3125
2	207540408	A->G	+	ENSG00000118260	CREB1	protein_coding	Intergenic	.	.	Alu	0.142857
2	207540561	A->G	+	ENSG00000118260	CREB1	protein_coding	Intergenic	.	.	Alu	0.142857
2	208308321	A->G	+	ENSG00000115020	PIKFYVE	protein_coding	Intergenic	.	.	Alu	0.153846
1	211348935	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intergenic	.	.	Alu	0.181818
1	211803813	A->G	-	ENSG00000123684	LPGAT1	protein_coding	Intergenic	.	.	Alu	0.2
1	213179244	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.333333
2	216141957	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.181818
2	218226128	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.181818
2	218226131	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.166667
1	224137412	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.166667
1	224186582	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	224516414	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.222222
2	224516449	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.103448
2	224516455	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.25
2	224516465	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.15
2	224516481	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.357143
2	224791562	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.117647
2	224791585	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.125
2	224791605	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.428571
1	225869752	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.6
1	225869759	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.3
1	225869760	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.25
1	225869827	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.4
1	225869858	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.2
1	225869866	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.2
1	225869867	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.2
2	227539296	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.307692
2	227539322	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.230769
2	227539541	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.142857
2	227539610	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.142857
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.6
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.666667
2	227539691	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.166667
2	227539708	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.1875
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.6
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.809524
2	227539936	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.266667
2	227540001	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.153846
2	227540016	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.307692
2	227540071	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
1	229443857	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.272727
2	229831545	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.214286
2	229831548	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.133333
2	229831569	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.357143
2	229884385	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.5
2	229884456	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.153846
2	230524249	A->G	+	ENSG00000067066	SP100	protein_coding	Intergenic	.	.	Alu	0.125
2	230524268	A->G	+	ENSG00000067066	SP100	protein_coding	Intergenic	.	.	Alu	0.142857
2	230769800	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.307692
2	230769801	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.230769
2	230769883	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.0869565
2	231173598	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	231449254	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	232546502	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	232546546	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	232726289	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.2
2	233071214	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.363636
2	233077538	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1
2	233077539	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1
2	233077579	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.136364
2	233095659	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233111882	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.416667
2	233111942	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.133333
2	233131441	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233131448	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.130435
2	233136352	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233155543	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233155547	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.230769
2	233155554	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.25
2	233155571	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.272727
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.380952
2	233159628	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0576923
2	233159635	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.06
2	233159643	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.382979
2	233174563	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.235294
2	233174567	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
2	233174688	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.166667
2	233175017	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233175916	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
2	233175958	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233205188	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233213373	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.181818
2	233213399	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.25
2	233213400	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.1875
2	233362431	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.142857
2	233362441	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.153846
2	233362449	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.181818
1	235146126	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.0869565
1	235236065	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235301335	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.117647
1	235301365	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.277778
1	235301371	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235301414	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.235294
1	235301423	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.210526
1	235301430	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.117647
1	235301503	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.52381
1	235318300	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.363636
1	235323133	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	236237231	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.2
1	236237255	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.285714
2	237707326	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.181818
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.461538
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.181818
2	241322422	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.130435
2	241322460	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0833333
2	241326827	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0540541
2	241326927	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.0833333
2	241326931	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.08
2	241326935	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.12
2	241326992	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.172414
2	241326993	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.129032
2	241328364	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
2	241331161	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.176471
1	243246410	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243266822	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.2
1	243266823	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.181818
1	243266828	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.181818
1	243266989	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.142857
1	243266995	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.1875
1	243267122	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.307692
1	243267128	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.357143
1	243267155	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.2
1	243267188	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.25
1	243267192	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.266667
1	243267206	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.470588
1	243447050	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.333333
1	243447051	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.105263
1	243447091	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.214286
1	243447101	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.0869565
1	243447105	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.347826
1	243447115	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.318182
1	243447130	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.323529
1	243447131	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.588235
1	243447201	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.363636
1	243567195	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.230769
1	243567198	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.615385
1	243567199	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.384615
1	243567263	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.461538
1	243567410	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.25
1	243567467	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.166667
1	243567473	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.3125
1	243567556	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.545455
1	243567560	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.111111
1	243567581	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.111111
1	243567608	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.333333
1	243567615	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.466667
1	243798011	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.285714
1	243798015	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.230769
1	243798021	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.769231
1	243798128	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.25
1	243798188	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	243798374	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.272727
1	243798380	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.166667
1	243798384	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.2
1	243798441	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.3
1	244432796	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.333333
1	244432803	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.272727
1	244432848	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.2
1	244432873	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.636364
1	244980098	A->G	+	ENSG00000203666	EFCAB2	protein_coding	Intergenic	.	.	Alu	0.454545
1	245104393	A->G	+	ENSG00000203666	EFCAB2	protein_coding	Intergenic	.	.	Alu	0.181818
1	245127360	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
1	245127382	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
1	245127413	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	245127451	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
1	245127452	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
1	246119257	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.2
1	246119482	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.111111
1	246119510	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.153846
1	246119537	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.272727
1	246185573	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.2
1	246269641	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.333333
1	246269705	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.333333
1	246269722	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.636364
1	246269727	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.545455
1	246269799	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.380952
1	246269846	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.153846
1	246273152	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.181818
1	246273345	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.0606061
1	246288179	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.181818
1	246288198	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.705882
1	246288234	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.4
1	246288256	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.333333
1	246288277	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.235294
1	246288278	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.1
1	246288281	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	246288293	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.136364
1	246576114	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.153846
1	246911630	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.272727
1	247137397	A->G	+	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.0769231
19	1458476	A->G	-	ENSG00000115266	APC2	protein_coding	Intron	.	.	Alu	0.133333
19	2737570	A->G	-	ENSG00000267001	AC006538.2	protein_coding	Intron	.	.	Alu	0.166667
7	5325491	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intron	.	.	Alu	0.136364
3	9827966	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.25
3	9828018	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.307692
3	9828021	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	1
2	9936699	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.2
2	10211581	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intron	.	.	Alu	0.166667
16	10454199	A->G	+	ENSG00000166669	ATF7IP2	protein_coding	Intron	.	.	Alu	0.666667
16	10454223	A->G	+	ENSG00000166669	ATF7IP2	protein_coding	Intron	.	.	Alu	0.285714
16	10454225	A->G	+	ENSG00000166669	ATF7IP2	protein_coding	Intron	.	.	Alu	0.153846
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.666667
19	11449925	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.166667
19	11449931	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.2
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.916667
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.3
19	11449984	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.153846
19	11850848	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.4375
19	11850910	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.461538
19	11850924	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.181818
19	11850946	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.117647
19	11850952	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.125
19	11850997	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.111111
19	12003517	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
8	12595275	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intron	.	.	Alu	0.454545
8	12595276	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intron	.	.	Alu	0.272727
8	12595282	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intron	.	.	Alu	0.666667
19	12660912	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.0952381
19	12660936	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.176471
19	12660937	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.176471
19	12660938	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.176471
19	12660977	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.352941
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.166667
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.758621
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.413793
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.125
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	1
3	14944631	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.114286
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.352941
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.333333
19	16565482	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intron	.	.	Alu	0.153846
19	16639971	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.136364
16	17192898	A->G	-	ENSG00000279410	AC099494.1	TEC	Intron	.	.	Alu	0.352941
8	17927609	A->G	+	ENSG00000078674	PCM1	protein_coding	Intron	.	.	Alu	0.2
8	17927690	A->G	+	ENSG00000078674	PCM1	protein_coding	Intron	.	.	Alu	0.210526
19	19796532	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
14	20449869	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.5
14	20449902	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.2
14	20449906	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.214286
19	21452101	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.388889
19	21452150	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.111111
19	21452156	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.166667
19	21452160	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.388889
19	21452161	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.5
19	21452173	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.111111
19	21452182	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.125
19	21452213	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.133333
19	21452223	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.230769
19	21452226	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.333333
19	21452247	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.117647
19	21452248	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.111111
16	22419361	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.214286
16	22419387	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
16	22419396	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
16	22419431	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
22	23658597	A->G	-	ENSG00000272578	AP000347.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
22	23658602	A->G	-	ENSG00000272578	AP000347.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
22	23658639	A->G	-	ENSG00000272578	AP000347.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
22	23659249	A->G	-	ENSG00000272578	AP000347.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
15	24983667	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24983668	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.3
1	25230971	A->G	-	ENSG00000117614	SYF2	protein_coding	Intron	.	.	Alu	0.181818
22	26475490	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.176471
22	26475491	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.352941
22	26475501	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.153846
22	26475624	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.545455
22	26475625	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.545455
22	26475633	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.818182
22	26475959	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.636364
22	26475967	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.3
22	26475980	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.545455
22	26475981	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.2
22	26476441	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.772727
22	26476446	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.105263
22	26476479	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.137931
22	26476511	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.130435
22	26476514	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.125
22	26476518	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.129032
22	26476526	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.0645161
22	26476529	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.1
22	26476544	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.217391
22	26476547	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.677419
1	26778130	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.363636
1	26778146	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.3
1	26778219	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.181818
1	26778221	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.181818
17	27302668	A->G	+	ENSG00000109046	WSB1	protein_coding	Intron	.	.	Alu	0.117647
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0693069
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0359712
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.078125
10	28523667	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.102041
10	28523697	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0392157
10	28523698	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0784314
17	28721097	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.08
17	28722419	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0487805
17	28722429	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.153846
17	28722449	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0555556
16	28862303	A->G	-	ENSG00000178188	SH2B1	protein_coding	Intron	.	.	Alu	0.666667
16	28862317	A->G	-	ENSG00000178188	SH2B1	protein_coding	Intron	.	.	Alu	0.666667
1	29173178	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0909091
1	29173235	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.142857
1	29173302	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.117647
17	30772387	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.277778
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.380952
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.185185
16	31123747	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.12
16	31123759	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0625
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.28
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.230769
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.413793
22	31348564	A->G	+	ENSG00000213888	LINC01521	lincRNA	Intron	.	.	Alu	0.15
22	31348566	A->G	+	ENSG00000213888	LINC01521	lincRNA	Intron	.	.	Alu	0.0869565
22	31348567	A->G	+	ENSG00000213888	LINC01521	lincRNA	Intron	.	.	Alu	0.0909091
2	32322876	A->G	+	ENSG00000272754	AL133245.1	lincRNA	Intron	.	.	Alu	0.272727
13	32406598	A->G	-	ENSG00000139597	N4BP2L1	protein_coding	Intron	.	.	Alu	0.105263
13	32406608	A->G	-	ENSG00000139597	N4BP2L1	protein_coding	Intron	.	.	Alu	0.176471
1	32781952	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.1875
1	35438652	A->G	-	ENSG00000142687	KIAA0319L	protein_coding	Intron	.	.	Alu	0.2
19	35770765	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intron	.	.	Alu	0.2
19	35770783	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intron	.	.	Alu	0.5
21	36339189	A->G	+	ENSG00000159256	MORC3	protein_coding	Intron	.	.	Alu	0.7
1	36477355	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intron	.	.	Alu	0.214286
1	36477549	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intron	.	.	Alu	0.08
7	37271212	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intron	.	.	Alu	0.125
22	37883202	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	Intron	.	.	Alu	0.166667
19	38844801	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0833333
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.205128
19	38844917	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.25
5	38969801	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.307692
5	38969807	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.333333
5	38969862	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.166667
5	38969869	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.153846
3	39408965	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.3
19	39491548	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.214286
19	39491565	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.352941
19	39491588	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.571429
19	39491591	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.4
19	39491616	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.230769
19	39491621	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.153846
19	39491636	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.277778
19	39491658	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.133333
19	39491689	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.588235
19	39491701	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.368421
19	39491716	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.2
19	39491748	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.25
19	39492724	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.25
19	39492826	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.333333
7	40049026	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.166667
7	40049027	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.105263
7	40049033	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.277778
7	40049074	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.3
7	40049140	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.133333
7	40049145	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.214286
7	40049150	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.166667
15	40693802	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intron	.	.	Alu	0.1875
15	40693807	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intron	.	.	Alu	0.2
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0408163
15	41298816	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0882353
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.171429
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.9
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.133333
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.277778
15	41299245	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.117647
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.105263
15	41300994	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.176471
15	41301110	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.15
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0645161
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.113208
15	41302332	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.12766
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.121212
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.047619
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.111111
15	41305286	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.117647
15	41305287	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.147059
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0731707
15	41305335	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.138889
15	41305345	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.15625
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.115385
15	41305370	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0689655
15	41305379	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.363636
15	41305405	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.108108
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.444444
15	41305459	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.075
21	41429787	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.272727
17	42014703	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.181818
3	42602861	A->G	+	ENSG00000114857	NKTR	protein_coding	Intron	.	.	Alu	0.166667
5	43574171	A->G	-	ENSG00000248092	NNT-AS1	antisense	Intron	.	.	Alu	0.166667
5	43575669	A->G	-	ENSG00000248092	NNT-AS1	antisense	Intron	.	.	Alu	0.230769
20	44225859	A->G	+	ENSG00000223891	OSER1-DT	lincRNA	Intron	.	.	Alu	0.0833333
1	44626819	A->G	+	ENSG00000187147	RNF220	protein_coding	Intron	.	.	Alu	0.1875
1	44626828	A->G	+	ENSG00000187147	RNF220	protein_coding	Intron	.	.	Alu	0.2
17	45218324	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.111111
17	45218390	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.105263
17	45218399	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.142857
17	45218426	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.1875
17	45218464	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.227273
17	45218486	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.333333
17	45218503	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.136364
17	45218533	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.12
17	45218534	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.0833333
17	45218536	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.272727
17	45218563	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.117647
17	45218634	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.0909091
17	45218639	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.15
17	45218675	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.125
17	45218685	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.294118
17	45218698	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.285714
17	45218708	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.538462
13	45391603	A->G	+	ENSG00000170919	TPT1-AS1	processed_transcript	Intron	.	.	Alu	0.2
19	47495102	A->G	+	ENSG00000105402	NAPA	protein_coding	Intron	.	.	Alu	0.133333
11	47513991	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intron	.	.	Alu	0.166667
17	48865264	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intron	.	.	Alu	0.2
17	48865272	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intron	.	.	Alu	0.4
14	49820112	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.333333
14	49820116	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.416667
14	49820119	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.357143
14	49820152	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.428571
14	49820192	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.307692
14	49820217	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.230769
14	49820239	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.166667
3	49962979	A->G	+	ENSG00000004534	RBM6	protein_coding	Intron	.	.	Alu	0.578947
3	49962989	A->G	+	ENSG00000004534	RBM6	protein_coding	Intron	.	.	Alu	0.125
15	50357569	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50358040	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50358041	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.190476
15	50358084	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.105263
15	50358110	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.277778
15	50358184	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50358190	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50358250	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50359765	A->G	+	ENSG00000259715	AC022087.1	lincRNA	Intron	.	.	Alu	0.3
15	50360622	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.176471
15	50360623	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50360641	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.409091
15	50360646	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.565217
15	50360651	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.285714
15	50360681	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.571429
15	50360686	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.705882
15	50360698	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.222222
15	50360708	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.625
15	50360710	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50360724	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.193548
15	50360730	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0967742
15	50360752	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.416667
15	50360754	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.08
15	50360778	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.6
15	50360783	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.578947
15	50360789	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.588235
15	50360798	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.08
15	50360816	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50360821	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.233333
15	50360829	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0645161
15	50360830	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.09375
15	50360831	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0588235
15	50360843	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0833333
15	50360851	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0967742
15	50360992	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0454545
15	50360993	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.148936
15	50360995	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50361001	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.075
15	50361002	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0487805
15	50361015	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.97619
15	50361018	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0487805
15	50361024	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.305556
15	50361028	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50361050	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.103448
15	50361055	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.366667
15	50361061	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0689655
15	50361073	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.310345
15	50361080	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.148148
15	50361081	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.24
15	50361092	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0571429
15	50361105	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.102564
15	50361106	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0789474
15	50361120	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.710526
15	50361136	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0714286
15	50361137	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.642857
15	50361146	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0666667
15	50361153	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0645161
15	50361159	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.217391
15	50361163	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.565217
15	50361178	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.15
15	50361206	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50365842	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.4
15	50365847	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.8
15	50366470	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50366475	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50366495	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50366631	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.357143
15	50366647	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50366663	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.285714
15	50366761	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.157895
15	50366794	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1875
15	50366807	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1
15	50366812	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.473684
15	50366822	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.64
15	50366836	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.208333
15	50366895	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50366908	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1
15	50366921	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1875
15	50366930	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.533333
15	50366937	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50366946	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50366962	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50367238	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50367248	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0952381
15	50367276	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50367291	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
15	50367301	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.727273
15	50367315	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50367346	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50367398	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0833333
15	50367426	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0857143
15	50367431	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0606061
15	50367442	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0555556
15	50368041	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.125
15	50368094	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.210526
15	50368114	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.65
15	50368174	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0952381
15	50368176	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0952381
15	50368182	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.12
15	50368210	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.125
15	50368218	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.09375
15	50368239	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0588235
15	50368336	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.176471
15	50368363	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50368383	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50368400	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.24
15	50368401	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50368403	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368417	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0714286
15	50368432	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.08
15	50368452	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50368459	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368468	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.148148
15	50368485	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50368486	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.263158
15	50368623	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0909091
15	50368761	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50368837	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50369814	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.107143
15	50369852	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.157895
15	50369876	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.105263
15	50369900	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.157895
15	50369930	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0833333
15	50369966	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.241379
15	50369967	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50369972	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.121212
15	50369981	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.228571
15	50370038	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50370039	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0645161
15	50370060	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0652174
15	50370072	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0425532
10	50631378	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.3
10	50631379	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.4
10	50631516	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.1875
10	50631517	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.125
13	50938977	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intron	.	.	Alu	0.153846
13	50938980	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intron	.	.	Alu	0.133333
17	51183273	A->G	-	ENSG00000279089	AC005839.1	TEC	Intron	.	.	Alu	0.117647
14	52721545	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.0952381
14	52721546	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.333333
14	52721822	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.181818
19	52927179	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
19	52927185	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
19	52927199	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
19	52927614	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.214286
19	52927639	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
19	52927644	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
2	53870446	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0571429
2	53870465	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0833333
2	53870512	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0625
2	53870534	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0714286
2	53870581	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.142857
2	53870635	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.125
2	53870662	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.15
2	53870887	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.153846
14	55285291	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.3
14	55285295	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.272727
4	55412140	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.114286
18	55551072	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.0714286
18	55551082	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.222222
18	55551132	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.222222
18	55551172	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.0869565
18	55551187	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.136364
18	55551201	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.2
7	56073940	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intron	.	.	Alu	0.133333
12	56312844	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.24
19	56378721	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.636364
19	56379222	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.176471
19	56379225	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
19	56379238	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.545455
19	56379264	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.538462
19	56379265	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.461538
19	56379298	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
19	56379301	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.176471
19	56379331	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.117647
19	56379334	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.375
19	56379342	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
19	56379367	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
19	56379374	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
19	56379401	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
19	56379406	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.1875
17	57449750	A->G	+	ENSG00000279281	AC015883.1	TEC	Intron	.	.	Alu	0.266667
17	57449905	A->G	+	ENSG00000279281	AC015883.1	TEC	Intron	.	.	Alu	0.115385
18	57641719	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.230769
14	58258319	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.2
14	58258333	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.5
19	58582631	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.115385
19	58582632	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0769231
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.363636
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.611111
19	58584165	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.1
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.25
17	62004993	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.181818
17	62005012	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.636364
17	63725745	A->G	-	ENSG00000125695	AC046185.1	protein_coding	Intron	.	.	Alu	0.2
17	64782811	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.636364
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.130435
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0967742
15	65753911	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intron	.	.	Alu	0.0869565
17	67956518	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.6
17	67956570	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.5
17	67956592	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.181818
3	71289787	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intron	.	.	Alu	0.0769231
14	73286297	A->G	-	ENSG00000133961	NUMB	protein_coding	Intron	.	.	Alu	0.454545
10	73778867	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.214286
10	73779308	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.133333
10	73779335	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.111111
11	73880566	A->G	+	ENSG00000175575	PAAF1	protein_coding	Intron	.	.	Alu	0.315789
11	73880593	A->G	+	ENSG00000175575	PAAF1	protein_coding	Intron	.	.	Alu	0.166667
X	74278391	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.357143
X	74278417	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.6875
X	74278422	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.363636
X	74278427	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.166667
X	74278476	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.210526
X	74278485	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.117647
X	74278491	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.769231
16	75394792	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intron	.	.	Alu	0.142857
16	75394807	A->G	-	ENSG00000153774	CFDP1	protein_coding	Intron	.	.	Alu	0.3125
11	76441485	A->G	-	ENSG00000255135	AP002360.1	lincRNA	Intron	.	.	Alu	0.0465116
5	78359518	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.2
5	78359554	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.181818
17	80416116	A->G	+	ENSG00000173818	ENDOV	protein_coding	Intron	.	.	Alu	0.272727
4	86926014	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intron	.	.	Alu	0.3
4	86926015	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intron	.	.	Alu	0.181818
15	90075270	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.166667
15	90075276	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.105263
15	90075277	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.117647
15	90075318	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.166667
15	90075394	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.153846
15	90075400	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.166667
15	90075422	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.307692
15	90075439	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.117647
15	90075462	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.210526
15	90075465	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.1
15	90075516	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.25
9	92240375	A->G	-	ENSG00000196305	IARS	protein_coding	Intron	.	.	Alu	0.166667
1	93337871	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0645161
1	93337965	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0632911
1	93337969	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0649351
1	93337979	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.173913
1	93337985	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.028169
1	93337989	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0307692
1	93338001	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.037037
1	93338005	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0392157
12	93542565	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.272727
12	93542759	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.166667
12	93542776	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.181818
8	93759252	A->G	+	ENSG00000164953	TMEM67	protein_coding	Intron	.	.	Alu	0.2
8	93759253	A->G	+	ENSG00000164953	TMEM67	protein_coding	Intron	.	.	Alu	0.4
8	93759373	A->G	+	ENSG00000164953	TMEM67	protein_coding	Intron	.	.	Alu	0.3
14	96553390	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intron	.	.	Alu	0.2
14	96553404	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intron	.	.	Alu	0.454545
14	96553456	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intron	.	.	Alu	0.416667
14	96553468	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intron	.	.	Alu	0.2
8	98043194	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0487805
8	98043203	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.047619
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.658537
8	98043224	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.175
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.358491
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.685185
8	98043306	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0526316
8	98043307	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0333333
8	98043631	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.09375
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0425532
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.5
8	98044059	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.3
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.782609
13	100086556	A->G	-	ENSG00000274605	AL355338.1	lincRNA	Intron	.	.	Alu	0.166667
X	101393069	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.176471
4	102810541	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0740741
4	102810583	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0869565
14	103682429	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.25
14	103682430	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.4375
14	103682499	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0909091
14	103682520	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.0952381
14	103682551	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.818182
14	103682586	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.35
14	103682604	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.1875
14	103682606	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.333333
4	108623222	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.15
12	111753037	A->G	+	ENSG00000111271	ACAD10	protein_coding	Intron	.	.	Alu	0.2
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.2
10	112449969	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.25
10	112449980	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.166667
11	117159796	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.153846
12	121321090	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.4
12	121332190	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.2
12	121332235	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.2
12	121332236	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.181818
12	121332244	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.615385
12	121332249	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.272727
12	121332931	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.266667
12	121642494	A->G	+	ENSG00000276045	ORAI1	protein_coding	Intron	.	.	Alu	0.0555556
12	122878789	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.5
12	122878790	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.2
12	122883618	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.111111
12	122883624	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.125
7	128527100	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.3125
7	128527473	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.142857
7	128527552	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.181818
7	128527559	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.272727
7	128528089	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.4
7	128528090	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.153846
9	129504303	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.190476
9	129504304	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.333333
9	129504309	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0833333
9	129504336	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0869565
9	129504387	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.212121
9	129506678	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.181818
9	129506681	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.2
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.461538
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.3
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.2
12	132650971	A->G	-	ENSG00000177084	POLE	protein_coding	Intron	.	.	Alu	0.153846
5	132926759	A->G	-	ENSG00000072364	AFF4	protein_coding	Intron	.	.	Alu	0.117647
5	140535829	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.121212
7	140799119	A->G	-	ENSG00000157764	BRAF	protein_coding	Intron	.	.	Alu	0.133333
3	150565933	A->G	-	ENSG00000144895	EIF2A	protein_coding	Intron	.	.	Alu	0.111111
3	150566041	A->G	-	ENSG00000144895	EIF2A	protein_coding	Intron	.	.	Alu	0.125
4	151012973	A->G	-	ENSG00000198589	LRBA	protein_coding	Intron	.	.	Alu	0.3125
1	155670905	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.3
4	158679794	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.166667
4	158679938	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.363636
4	158680006	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.272727
3	168830483	A->G	+	ENSG00000206120	EGFEM1P	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.176471
2	178433762	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.142857
1	185292590	A->G	-	ENSG00000279838	AL356273.3	TEC	Intron	.	.	Alu	0.115385
1	185292630	A->G	-	ENSG00000279838	AL356273.3	TEC	Intron	.	.	Alu	0.181818
3	195700541	A->G	+	ENSG00000242086	MUC20-OT1	lincRNA	Intron	.	.	Alu	0.111111
3	195700552	A->G	+	ENSG00000242086	MUC20-OT1	lincRNA	Intron	.	.	Alu	0.117647
1	211358329	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.142857
1	211358585	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.1
1	211358586	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.15
2	230167167	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.411765
2	230167170	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.375
2	230167171	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.2
2	230167175	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.2
2	230167188	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.235294
2	230167192	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.133333
2	230167236	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.583333
2	230167242	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.636364
2	231452441	A->G	-	ENSG00000233538	AC017104.3	lincRNA	Intron	.	.	Alu	0.0540541
2	233140652	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.2
2	233140738	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.1875
2	233140786	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.333333
2	233140808	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.133333
2	233141298	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	1
2	233141311	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.078125
2	233141312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.492754
2	233141402	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.021978
2	233141416	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0215054
2	233141420	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.129412
2	233141446	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0697674
2	233141447	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0898876
2	233141452	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0243902
2	233141487	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.155556
2	233141488	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.139535
2	233141517	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0714286
2	233141527	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0806452
2	233205224	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.333333
2	233205247	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.166667
2	233205410	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.75
X	300140	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	300178	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	301263	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.3
X	301507	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	301791	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	301800	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	301806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	301826	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	301887	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.3
X	301888	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.3
X	302703	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.173913
X	302754	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	440962	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0377358
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0547945
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0428571
17	515933	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	767880	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.444444
11	767881	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.277778
11	767886	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.125
11	769359	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	769417	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	769459	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	1663582	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	1663586	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	1663609	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	1663635	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	1664100	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.4
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.3
17	2417277	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	2417351	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	2417357	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.653846
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.416667
7	2434482	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	2434496	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	2434556	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.125
7	2434688	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	2434699	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	2434732	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	2434737	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	2434824	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	2434863	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.15625
7	2434873	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	2434886	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	2434902	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	2434904	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0625
7	2434906	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.1
7	2434960	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	2434961	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	2434983	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0689655
7	2435006	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	2435014	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.178571
7	2435015	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	2435034	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.08
7	2441511	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.3
7	2441613	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.3
7	2441642	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	2441650	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	2443910	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	2447590	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	2447602	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.375
7	2447612	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.3125
7	2447673	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.25
7	2447941	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
7	2447948	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.25
7	2448033	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	2448034	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	2448048	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	2487523	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2487537	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	2839971	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.3
4	2840166	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2906205	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.5
X	2906259	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.37037
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.75
X	2906302	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	2906313	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.125
X	2906325	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	2906336	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.733333
X	2906392	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.958333
X	2906393	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.916667
X	2906415	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	2906421	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.388889
X	2906433	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	2938329	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.862069
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.275862
4	2938396	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0925926
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.178571
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.227273
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.606061
4	2938438	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.030303
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.241379
4	2938603	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0512821
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.387097
4	2938634	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0645161
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.147059
4	2938638	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.964286
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.810811
4	2938682	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0434783
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.075
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.255319
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.716981
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0483871
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.152542
4	2938759	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0327869
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.16
2	3545047	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	3824751	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3824811	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3868513	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3868559	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	3868594	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3869840	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.275
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.15
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	3870586	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0540541
20	3870616	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	3870629	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3870906	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	3870960	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.233333
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3870980	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.325
20	3870985	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.116279
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.444444
20	3871010	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0434783
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.227273
20	3871022	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
20	3871024	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0681818
20	3871036	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3871047	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3871064	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3871144	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.08
20	3871165	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.107143
20	3872413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3873309	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3873414	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	3873448	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3875159	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3928486	A->G	+	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3928499	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3928544	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.136364
20	3928557	A->G	+	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3928568	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.3125
20	3928572	A->G	+	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3928594	A->G	+	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3928595	A->G	+	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3928610	A->G	+	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3928884	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3928886	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3928889	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3928916	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3928931	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.416667
20	3928934	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3928946	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3928954	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3928960	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3929066	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3929073	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3929136	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3929282	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.26087
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3929347	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3929377	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3929388	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	4653226	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	4653414	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	4653590	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	4653593	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	4653604	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	4653657	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.588235
19	4653852	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	4653867	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	4654367	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	4654368	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	4654369	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	4654456	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	4654461	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	4654525	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	4654532	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	4654542	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	4750522	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	4750599	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.411765
16	4750609	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	4750654	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	4750671	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.2
16	4750676	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4838820	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.0230769
19	4838860	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.0210526
7	5389522	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.4
7	5389583	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	5389587	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.357143
7	5389592	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.375
7	5389736	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.9
7	5621315	A->G	-	ENSG00000011275	RNF216	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	5909772	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.6
1	6223184	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	6379786	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.0204082
1	6522181	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	6522287	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	6522293	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.2
12	7095254	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	7095395	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.55
17	8269931	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.235294
17	8269978	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.1
17	8269981	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	8269982	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.121212
17	8270007	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	8270058	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0465116
17	8270061	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.05
17	8270078	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	8270087	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	8270113	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0408163
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.208333
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.227273
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	8686396	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.135135
11	8686405	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
11	8686411	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	8687224	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.941176
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.15
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.923077
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.692308
11	8687288	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8687317	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.416667
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.625
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.2
16	9110891	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.2
16	9110931	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.416667
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	9267987	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	9267988	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.52
1	9268196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.05
1	9271022	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	9271041	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.148148
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.37931
1	9271117	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	9271195	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	9562303	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	9562305	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	9584969	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	9647352	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.3
19	9647353	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.2
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	10150968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.15
3	10150973	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	10151791	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.12
3	10151904	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0350877
3	10151919	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0566038
3	10151922	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0638298
3	10151940	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.03125
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0422535
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	10152049	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.129032
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.288889
3	10152190	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0434783
3	10152192	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.05
3	10152206	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0566038
3	10152209	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	10223213	A->G	+	ENSG00000130816	DNMT1	protein_coding	three_prime_utr	.	.	Alu	0.421053
1	10457219	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	10457249	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10457252	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10457256	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	10457305	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10457428	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457556	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.823529
1	10457566	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	10457578	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	10457596	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	10457602	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	10457615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457935	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	10457963	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.075
1	10458677	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.04
1	10458699	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	10458703	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	10458740	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.075
1	10458755	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	10458764	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10458769	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	10458774	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10458787	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.15625
1	10458788	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	10458919	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	10458991	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10459057	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	10459081	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	10459855	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.3
1	10459925	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.3
1	10460162	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	10460176	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10460201	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.692308
1	10460231	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460321	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	10460326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460448	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	10460475	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.193548
1	10460626	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.16129
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10460635	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.254237
1	10460662	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0677966
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460678	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	10460707	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	10460708	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0789474
1	10460710	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.184211
1	10460713	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	10460762	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	10461037	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10461069	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10461073	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10461113	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	10461115	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.5
1	10461180	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.1
16	10931691	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.1
16	10931692	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	1
16	10931736	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	10931760	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.5
16	10931866	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	11145950	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.366667
19	11146026	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0357143
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	11146584	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.4
19	11146832	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	11146833	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.90625
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.269231
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	11449715	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	11449718	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	11449732	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	11449811	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	11834868	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	11834919	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	11834963	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.619048
16	11834999	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	11835030	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.193548
16	11835067	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.206897
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.483871
16	11835249	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.590909
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.25
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.5
16	11835350	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	11835395	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	11835590	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835626	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.263158
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.266667
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.4
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	11842742	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.075
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	11842769	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	11842774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0816327
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.145833
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	11842801	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	11842806	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	11842812	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	11842813	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	11842814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	11842815	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0925926
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0566038
8	11842849	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0487805
8	11842854	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11842864	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.138889
8	11842879	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0882353
8	11842887	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.151515
8	11842909	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11842910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.421053
8	11843012	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	11843016	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.227273
8	11843017	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.190476
8	11843046	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.2
8	11843113	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.2
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.678571
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	11843173	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.538462
8	11843220	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.5
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	11843976	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	11914273	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.428571
10	12120973	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	12121033	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
10	12121127	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.113208
10	12121169	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	12875556	A->G	-	ENSG00000105612	DNASE2	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	13773206	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773362	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773376	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	13773384	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	13773385	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	13773445	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.421053
19	13773505	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	13773511	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	13773525	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	13773532	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	1
19	13773594	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	13773604	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	1
19	13773605	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.846154
19	13773775	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773797	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773855	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.478261
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	1
19	13773934	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	14907977	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	14907978	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0512821
10	14908022	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0606061
10	14908089	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	14908123	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.103448
9	15167142	A->G	-	ENSG00000155158	TTC39B	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	15167162	A->G	-	ENSG00000155158	TTC39B	protein_coding	three_prime_utr	.	.	Alu	0.692308
9	15167175	A->G	-	ENSG00000155158	TTC39B	protein_coding	three_prime_utr	.	.	Alu	0.1875
9	15167329	A->G	-	ENSG00000155158	TTC39B	protein_coding	three_prime_utr	.	.	Alu	0.636364
16	15411555	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	15411777	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.2
16	15411778	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	15411845	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.416667
16	16149205	A->G	+	ENSG00000091262	ABCC6	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16155701	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16551847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	16641436	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.125
19	16645760	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.125
19	16645802	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.2
19	16645826	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16761044	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	16761061	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.2
22	17110351	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.15
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	17110647	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	17110793	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.2
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.5
7	17345168	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.375
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17629076	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	17801156	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	17801164	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.1
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	17801234	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17801244	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.551724
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.233333
4	17801296	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	17801307	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.611111
4	17801311	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.125
4	17801317	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	17801333	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.12
4	17801353	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.08
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.6
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.366667
4	17801394	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.763158
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17801993	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.692308
4	17803162	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.12
19	17825720	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	18088708	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.3
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	18089887	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.588235
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	18272871	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	18272928	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	18272936	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	18274061	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	18274116	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.4
17	18274140	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18366600	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	18366886	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18366898	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18366899	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	18366943	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	18366971	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	18366993	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18367003	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18367005	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.714286
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	18367143	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18367958	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	18367966	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.304348
19	18368319	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.108108
20	18487695	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	18487707	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.4
20	18487717	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	18487824	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	18487828	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.15
20	18487830	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.1
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	19215745	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	19215756	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	19215807	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.15
1	19215816	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	19215843	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19215850	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	19215907	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	19215916	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	19215921	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	19215962	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19215964	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	19215969	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	19216137	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.727273
1	19216185	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19216191	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.138298
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.242424
1	19259060	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.688889
1	19260007	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.169811
1	19329136	A->G	+	ENSG00000040487	PQLC2	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.1
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.318182
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.04
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.258065
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.228571
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.138889
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.257143
13	19672976	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.411765
13	19673001	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	19680995	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	20651958	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0230415
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	20652071	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0210526
22	20890821	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0363636
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.454545
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.6
19	21805298	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21805301	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21805364	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	21805381	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	21805382	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21805395	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.3
19	21806237	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	21806242	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0533333
19	21806249	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	21806273	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	21806335	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	21806338	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.046875
19	21806358	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.24
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	21806437	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	21806438	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.27907
19	21806440	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.266667
18	23296417	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	23885621	A->G	+	ENSG00000133460	SLC2A11	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	23921034	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	23921064	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	23921100	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.125
19	23921125	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.85
19	23921131	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	23921142	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	23921149	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	23921185	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.684211
19	23921189	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.555556
19	23921221	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	23921238	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	24000386	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	24000421	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	24004409	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	24077103	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0291971
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0325203
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.055336
X	24077203	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0266667
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.101322
X	24077246	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.021645
X	24077249	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0267857
X	24077252	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0406977
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0348259
14	24124923	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	24124924	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	24572606	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0588235
22	24572610	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	24572640	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.129032
20	25447179	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	25447658	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.538462
20	25447672	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	25447867	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	25447875	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	25447911	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.103448
20	25447951	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.434783
20	25447952	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.227273
20	25448010	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.375
20	25448059	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.1
20	25448088	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	25986386	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	25986434	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.107143
6	25986439	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.137931
6	25986469	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	26668731	A->G	-	ENSG00000005020	SKAP2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
17	27312856	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	27312930	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
17	27312985	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	27312986	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0263158
1	28335638	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	28335646	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	28335660	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	28335664	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.1
1	28335669	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	28335675	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28335688	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.769231
1	28335805	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28335807	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28497513	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0545455
1	28497875	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	28497881	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	28498825	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.434783
1	28498869	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	28498884	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	28498892	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498906	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498907	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	28498921	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	28498953	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498954	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.375
1	28498957	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498961	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498974	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28498993	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.3
1	28499503	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28499519	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	28499541	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	28499556	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28499573	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.6
1	28499580	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	28499606	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	28499616	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28499622	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	28499629	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	28499638	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.535714
1	28499711	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	28499749	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	28965409	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	28965528	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0428571
16	28965613	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	28965618	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	29193153	A->G	-	ENSG00000116353	MECR	protein_coding	three_prime_utr	.	.	Alu	0.5
17	29560926	A->G	-	ENSG00000168792	ABHD15	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	29560927	A->G	-	ENSG00000168792	ABHD15	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29665119	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0288462
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0560748
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.06
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0378788
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0409836
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0462963
16	29666269	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.025
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0522388
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.248
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.664
16	29667528	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0420168
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.109589
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.097561
16	29667575	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0576923
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.316667
16	29667598	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0333333
16	29667599	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.254237
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147059
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0724638
16	29667624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0263158
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0428571
16	29667633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.027027
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115789
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103093
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0215054
16	29667708	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.145833
16	29667758	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0212766
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.138298
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0842105
16	29667782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0275229
16	29667802	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0266667
16	29668210	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1125
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.196721
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.227273
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.486842
16	29668276	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0289855
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.179104
16	29668292	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0447761
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102941
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.18
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.52
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.212766
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.288462
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29668493	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0675676
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.323077
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.59322
16	29668525	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0701754
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.262295
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.118644
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0819672
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113924
16	29668541	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113924
16	29668548	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	29668564	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0422535
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102941
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.464789
16	29668631	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25641
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0655738
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.169231
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0757576
16	29668699	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0784314
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0967742
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.084507
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0486111
16	29668913	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0409836
16	29668933	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.524752
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0784314
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.221154
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.194444
16	29668970	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	29668991	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0461538
16	29668994	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0241935
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.124031
16	29668997	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0325203
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0895522
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.151724
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0927152
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119048
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0205479
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0613497
16	29669084	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0229008
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0736196
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.195946
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669282	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669306	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.411765
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.689655
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29669386	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0754717
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.109091
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.265625
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.430233
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.892857
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.154639
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.849206
16	29669484	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.021978
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.375
16	29669603	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0245902
16	29669615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.491228
16	29669630	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0423729
16	29669633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29669651	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.109589
16	29669660	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.75
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.340426
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.553191
16	29669681	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.148148
16	29669684	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29669690	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0860215
16	29669703	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	29669719	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0813008
16	29669729	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29669755	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.632653
16	29669756	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.425532
16	29669765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669797	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	29669817	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29669821	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.18
16	29669826	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	29669828	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0517241
16	29669831	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.396825
16	29669859	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103896
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.178571
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0406091
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0949721
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.345133
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0901639
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0961538
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0230263
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0633333
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0694444
16	29670086	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0202899
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0722022
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.094697
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.365385
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.424125
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0747331
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0610169
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	29670186	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0615385
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0743494
16	29670230	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0225806
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.144295
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0337838
16	29670288	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0277778
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.229885
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0871369
16	29670303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0252708
16	29670312	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0210084
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0863636
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.023622
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.10566
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0581395
16	29670330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0223881
16	29670333	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0395683
16	29670338	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0213523
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0431034
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.444444
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.155405
16	29670374	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0529801
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.232082
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0466926
16	29670398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0579151
16	29670401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0333333
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0613208
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.159574
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.202381
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102459
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0326087
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0454545
13	30457256	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
13	30457264	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
13	30457483	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	30559097	A->G	-	ENSG00000120280	CXorf21	protein_coding	three_prime_utr	.	.	Alu	0.08
16	30578684	A->G	-	ENSG00000197162	ZNF785	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	30578738	A->G	-	ENSG00000197162	ZNF785	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	30678389	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	30678390	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.25
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.162162
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.625
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.257143
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.162162
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.125
8	30679037	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30679062	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0487805
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.097561
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.30303
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.275862
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32069040	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32069042	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0930233
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0731707
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	32069083	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32069107	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0857143
18	32069109	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0571429
18	32069116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.162162
18	32069133	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0909091
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.136364
18	32070418	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070432	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070433	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32072002	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.1875
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.266667
18	32072103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	32072116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32072156	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
21	32268845	A->G	-	ENSG00000159055	MIS18A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	32307656	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32307664	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32307672	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	32307673	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	32307741	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32307751	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	32307771	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.25
2	32307780	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.12
2	32307796	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	32307809	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.216216
2	32307814	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.128205
2	32307818	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.194444
2	32307876	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	32307880	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32308458	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	32308459	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32308464	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	32308467	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.125
2	32308485	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	32308527	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	1
2	32308528	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	32308552	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	32308553	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	32308558	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	32308592	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	32308593	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	32308610	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.25
2	32310679	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	32310728	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	32310767	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	32310796	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	32312367	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.3
2	32312377	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32312826	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32313552	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32315602	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	32333512	A->G	+	ENSG00000101350	KIF3B	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	32510702	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.25
13	32510741	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32605442	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32605585	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	32682495	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.3
1	32682517	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	32682518	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32683020	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.684211
1	32683034	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.15
1	32683105	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	32683139	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	32683162	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.52
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0483871
6	33005247	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.107692
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.183333
6	33005300	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	33005344	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0408163
6	33005354	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0888889
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.823529
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33005415	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	33005440	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.625
6	33005453	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	33005459	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.108108
6	33005645	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.25
6	33005646	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.47619
6	33005675	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	33005742	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.1
6	33005769	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	33005780	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.46875
6	33005797	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	33005798	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005807	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.357143
21	33264120	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.117647
21	33264779	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.2
21	33264783	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	33264788	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	33264840	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	33264841	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.210526
21	33264844	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.444444
21	33264854	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.4
21	33264911	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.705882
21	33264920	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.769231
21	33264941	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.084507
6	33300753	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0229885
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0631579
6	33300842	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.020202
6	33300844	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.039604
6	33300854	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0333333
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
21	33529569	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.375
21	33529573	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	33529612	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33529623	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.818182
21	33529626	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	33529629	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	33594739	A->G	-	ENSG00000205758	CRYZL1	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	33594740	A->G	-	ENSG00000205758	CRYZL1	protein_coding	three_prime_utr	.	.	Alu	0.416667
21	33594799	A->G	-	ENSG00000205758	CRYZL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	34231096	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	34231108	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.636364
15	34231109	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.6
15	34231315	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.5
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	1
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.107143
15	34231722	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.131579
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.666667
15	34231746	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.290323
15	34231765	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.137931
15	34231773	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	34231819	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.4
15	34231836	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.5
15	34231862	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	34231863	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	34232324	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	34232344	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.210526
15	34232384	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34232392	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	34470209	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.3
5	34908348	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	35249532	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	35249542	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.0769231
18	35249594	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.230769
18	35249598	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	35249610	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	35580671	A->G	-	ENSG00000096060	FKBP5	protein_coding	three_prime_utr	.	.	Alu	0.3
6	35580678	A->G	-	ENSG00000096060	FKBP5	protein_coding	three_prime_utr	.	.	Alu	0.3
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.1
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.511628
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	35602210	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.767442
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.113636
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.518519
1	35602249	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	35602250	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	35602269	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.83871
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.466667
1	35602565	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.37931
1	35602595	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.44
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.75
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
1	35602642	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.162791
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35602676	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.163265
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.408163
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.583333
22	35661238	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	35661247	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	35661291	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.7
22	36266650	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.3
22	36266900	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.190476
21	36293862	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.2
21	36293907	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	36487870	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	36487875	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	36488356	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.1
22	36488364	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	36488423	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	36488497	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37103360	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.461538
2	37103423	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.3
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	37104497	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37104519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.193548
2	37104603	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.368421
2	37202390	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	37202459	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	37202524	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	37202525	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.106383
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.211538
2	37202546	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.233333
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37204331	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37204395	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	37204420	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	37204439	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	37290221	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	37477620	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	37477644	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	37477647	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.769231
17	37477729	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	37477732	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.733333
17	37477866	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.25
17	37477867	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.15
17	37477872	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	37477888	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	37477910	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.681818
17	37477934	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	37477956	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	37477971	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	37478073	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0847458
9	37503353	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0322581
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.211538
9	37503467	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0526316
9	37503493	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0408163
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0377358
17	37515493	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	37540019	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	37540027	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	37540028	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.2
19	37540054	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	37540107	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	37540108	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	37541568	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.2
19	37541607	A->G	+	ENSG00000188227	ZNF793	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	37610186	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	37610196	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.205882
1	37860957	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.511628
1	37860989	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.135135
1	37860993	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	37861011	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	37861028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.302326
1	37861032	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.162791
1	37861033	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.55814
1	37861066	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	37861463	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	37861481	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37861509	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	37861644	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	37861870	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	37861906	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	37861912	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	37889257	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.166667
7	38724715	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	38724718	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.4
7	38724722	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.5
17	38849511	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	38849531	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	1
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.45
17	38849890	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	38849917	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.259259
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38849970	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.473684
19	38868163	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	38868164	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	38868182	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	38868217	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	38868226	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	38868388	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	38868411	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.1
19	38868412	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.1
19	38868415	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	38868416	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	38868428	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	38868460	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	38868512	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	38868522	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	38868589	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	38971782	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.26087
8	38971934	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.25
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.263158
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.2
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0234375
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.238095
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0719424
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.5
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0888889
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.5
22	39019869	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0512821
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.237288
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.823529
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.12963
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.592593
22	39019976	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0333333
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.268817
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0412371
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0357143
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0631579
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.372093
22	39053500	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39257045	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	39491952	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.2
19	39492231	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	39492611	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	39492612	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	40465929	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.75
3	40466071	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.2
3	40466116	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.352941
3	40466136	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	40466407	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	40466417	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	40466425	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	40466426	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.08
3	40466431	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.16
3	40466434	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.28
3	40466452	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	40466484	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.12
5	40825834	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0697674
5	40825843	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.102564
8	41542432	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.1
8	41542510	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.47619
8	41542540	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	41542568	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.25
8	41543946	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	41543950	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.5
8	41543954	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	41543969	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.8
19	41863942	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	41863943	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.521739
19	41871534	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	41871544	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.4
19	41871556	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.714286
19	41871558	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	41871559	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	41871565	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.45
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.4
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.314286
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.671642
19	41872803	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.25
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.264706
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.409091
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42079637	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	42207256	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42207346	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42207493	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	42207511	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	42377666	A->G	+	ENSG00000105429	MEGF8	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	42567184	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	42567556	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	42567697	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.1
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	42567937	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42886943	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
6	42886944	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
6	42887368	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0652174
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.516129
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.15625
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.342105
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.659574
6	42888301	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	42888304	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.37037
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.115385
6	42888318	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	42888335	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	1
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.789474
6	42888418	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.380952
6	42888419	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	42888420	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.633333
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.160714
6	42889177	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.031746
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.777778
6	42889185	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
6	42889186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.05
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.18
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	42889231	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.114286
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.445946
6	42889251	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.025974
6	42889283	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0266667
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42889288	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0441176
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.084507
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.343284
6	42889299	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.030303
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.116667
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42889361	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.26087
6	42889382	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0597015
6	42889386	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.03125
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0615385
8	43020528	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020529	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020539	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020583	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43020593	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43020594	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.833333
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.294118
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.473684
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.263158
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.368421
8	43020872	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.185185
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.541667
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.137931
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.192308
8	43020963	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.290323
8	43020987	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
8	43021008	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.09375
8	43021014	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43021022	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	43021023	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43021030	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.233333
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021368	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	43021378	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.266667
8	43021404	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	43021433	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43021443	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.9
8	43021445	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021810	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43023059	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43023075	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43023091	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	43023095	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.571429
8	43029211	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	43029214	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	43218514	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	43219478	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	43219595	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	43219682	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	43219689	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	43615012	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	43615089	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	43615158	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	43615301	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	43615435	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	44578718	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.2
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	44749145	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	44749265	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.551724
3	44749280	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.47619
3	44749367	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.692308
3	44749385	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.5
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	44749412	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.125
3	44749851	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	44749859	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	1
3	44749905	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.583333
3	44749906	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.5
3	44749914	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749950	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44750055	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	44750062	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.428571
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.953488
7	44801894	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.156863
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.310345
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.531915
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.128205
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.146341
7	44834927	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	44835063	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	44835065	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.3
20	45079028	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	45079058	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.125
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.258065
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.09375
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0731707
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.439024
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.368421
13	45334144	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	45549683	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45549717	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.25
3	45680497	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.5
3	45680498	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.9
3	45680550	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.533333
3	45680551	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.4
3	45680555	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.857143
3	45680563	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.5
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.95
3	45680770	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.3
3	45680849	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.368421
3	45680850	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	45680858	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680863	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	45680889	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.615385
3	45680895	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.25
3	45680998	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	45680999	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	45703689	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	45703697	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	1
19	45703698	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	46364179	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	46364438	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.0444444
1	46364509	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.330935
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0338983
8	47977687	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0726257
16	48352443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	48353359	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48353367	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	48353385	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.375
X	48577960	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0355987
X	48577961	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0210697
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48749759	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.235294
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.588235
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	50105604	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.75
16	50105669	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.25
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	50325958	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.428571
14	50325974	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50325980	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50325998	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326005	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50326020	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	50326045	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1
14	50326069	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	50326070	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50326083	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.103448
14	50326109	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	50326110	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0540541
14	50326115	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	50326119	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50326179	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	50326859	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50326894	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	50326920	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326985	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	50327099	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	50327149	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	50327183	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50327185	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.8125
14	50327214	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.538462
14	50327221	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50327228	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	50327250	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	50327255	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	50327590	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50327604	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.785714
14	50327648	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.4
14	50327674	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.461538
14	50327693	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327706	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.416667
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50930406	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.304348
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.131579
12	50930525	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0697674
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	50930539	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.232558
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.305556
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.25641
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.410256
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.162162
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0980392
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.301887
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.423729
12	50930860	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	50931446	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0461538
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.375
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.306667
12	50931463	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0263158
12	50931493	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0298507
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.376623
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.243902
12	50931505	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.28
12	50931541	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.444444
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.155556
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.278481
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.269231
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0941176
12	50931600	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	50931623	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0434783
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.175439
12	50931639	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0350877
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0925926
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.148148
12	50931661	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	50931666	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0612245
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.108108
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.414634
12	50931800	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.049505
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0337079
13	51444313	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.6
13	51444384	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	51444627	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.3
15	51913757	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	51913758	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	51913812	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	51913835	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	51913836	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	51913854	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	51913863	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	51913933	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	51913938	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	51913957	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	51914003	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	51914115	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	51914393	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	51914409	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51914410	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.4
15	51915006	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52031763	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52031934	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52031956	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	1
19	52031958	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52032551	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.4
19	52032552	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52032612	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	52032613	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	52032614	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	52032617	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.533333
14	52775636	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	52775699	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	52775760	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	52775770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	52775800	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.173913
14	52775921	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	52775933	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	52776115	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	52776141	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.3125
14	52776688	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	52776693	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.7
14	52776716	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	52776720	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	52797871	A->G	-	ENSG00000198538	ZNF28	protein_coding	three_prime_utr	.	.	Alu	0.2
1	52825736	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.4
1	52825762	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	52825763	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	52878521	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	52878522	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	52878528	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	53494467	A->G	+	ENSG00000198346	ZNF813	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	53495649	A->G	+	ENSG00000198346	ZNF813	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	53495690	A->G	+	ENSG00000198346	ZNF813	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	53495691	A->G	+	ENSG00000198346	ZNF813	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	54099486	A->G	+	ENSG00000116205	TCEANC2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	54099688	A->G	+	ENSG00000116205	TCEANC2	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	54233696	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	54353861	A->G	-	ENSG00000167613	LAIR1	protein_coding	three_prime_utr	.	.	Alu	0.0793651
19	54353871	A->G	-	ENSG00000167613	LAIR1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
19	54353962	A->G	-	ENSG00000167613	LAIR1	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.710526
X	54560777	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	54560785	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.137931
X	54560786	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	54560863	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
X	54560864	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	54560865	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	54560907	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.388889
X	54560917	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.619048
X	54560919	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	54560920	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.52381
X	54560929	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.2
X	54560946	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	54560978	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.742857
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.236842
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.162162
X	54561029	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	54561032	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	54638936	A->G	+	ENSG00000162390	ACOT11	protein_coding	three_prime_utr	.	.	Alu	0.125
1	54638944	A->G	+	ENSG00000162390	ACOT11	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	54638952	A->G	+	ENSG00000162390	ACOT11	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	54638982	A->G	+	ENSG00000162390	ACOT11	protein_coding	three_prime_utr	.	.	Alu	0.4
1	54639071	A->G	+	ENSG00000162390	ACOT11	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	55317452	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	55317453	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	55390346	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.2
19	55390405	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	55390414	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	55825105	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	55825184	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	55960669	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	55960718	A->G	+	ENSG00000174799	CEP135	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	56067429	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.388889
8	56067441	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.555556
8	56067442	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.352941
8	56067527	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.3
8	56067537	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.6
8	56068376	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	56068394	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	56068426	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.642857
8	56068455	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.461538
8	56068456	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.461538
12	56229587	A->G	+	ENSG00000139579	NABP2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
12	56229623	A->G	+	ENSG00000139579	NABP2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
4	56459955	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.196429
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.305085
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	56460020	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.030303
4	56460070	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0204082
4	56460084	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0421053
4	56460092	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.03
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.102041
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.632075
4	56460126	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0294118
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.3
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.19
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.102564
4	56460161	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	56460707	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.35
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.34127
4	56460751	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0683761
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0629921
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.328
4	56460856	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.05
4	56460860	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0337079
4	56460873	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0253165
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.27381
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.303704
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	1
4	56460926	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0458015
4	56460931	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0352113
4	56460942	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.027027
4	56460950	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0985915
4	56460971	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.02
19	57222095	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.583333
6	57646338	A->G	+	ENSG00000146143	PRIM2	protein_coding	three_prime_utr	.	.	Alu	0.4
3	57901922	A->G	+	ENSG00000163681	SLMAP	protein_coding	three_prime_utr	.	.	Alu	0.2
3	58318745	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0512821
3	58318823	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	58318948	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.15
17	59203604	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	59203649	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	59203659	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.388889
17	59203682	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	59203694	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	1
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	59203711	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	59203737	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.541667
17	59204139	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0392157
17	59204152	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	59204275	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.027027
17	59204328	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	59204661	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0363636
17	59204663	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0350877
17	59274335	A->G	+	ENSG00000153982	GDPD1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	60142804	A->G	+	ENSG00000126773	PCNX4	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	62450567	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.2
15	64142243	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	64142248	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	64142303	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.294118
15	64142315	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64322854	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.150943
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.137255
17	64322944	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	64364864	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0425532
15	64364904	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.5
15	64365275	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0454545
12	64450281	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	64450291	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.928571
12	64450338	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	64450354	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.722222
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.833333
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	1
14	64934298	A->G	+	ENSG00000258289	CHURC1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	65149326	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.307692
11	65305553	A->G	+	ENSG00000014138	POLA2	protein_coding	three_prime_utr	.	.	Alu	0.692308
15	65659396	A->G	-	ENSG00000074621	SLC24A1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	65659409	A->G	-	ENSG00000074621	SLC24A1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	66153259	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	66153318	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	66153805	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.25
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66154275	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	66154276	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.413793
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.25
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.2
7	66154366	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.238095
7	66154391	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	66333542	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.12
15	66333608	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.0425532
15	66333654	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	66889856	A->G	+	ENSG00000172840	PDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	66889867	A->G	+	ENSG00000172840	PDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
17	67339236	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.3
17	67339240	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.2
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.717949
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.452381
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.465116
1	67409022	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.441176
1	67409051	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	67409142	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.411765
2	68131054	A->G	-	ENSG00000243667	WDR92	protein_coding	three_prime_utr	.	.	Alu	0.09375
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0537634
11	68755445	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0365854
11	68755482	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	68755577	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0361446
11	68755578	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0229885
11	68755579	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0348837
11	68755586	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0337079
11	68755587	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0340909
11	68755604	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	68755605	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0273973
11	68755606	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.242424
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0757576
11	68755643	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.037037
11	68755659	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0222222
11	68755660	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0978261
11	68755681	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.08
11	68755682	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.170732
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.047619
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.146341
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.210526
11	68755931	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	68755948	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.1
11	68755951	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0930233
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.261905
11	68755988	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0625
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.62069
11	68756003	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.6
12	68767342	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	68767343	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	68767410	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	68768204	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	68768209	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	68768210	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	69210139	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0212766
5	69210140	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0531915
5	69210267	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0666667
5	69280913	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	69280917	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.368421
5	69280925	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	69281278	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.3125
5	69281292	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.2
16	69322813	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	69322825	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	69322943	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	69327233	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	69327266	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	69327305	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	69327316	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.3
16	69327332	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	69327341	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	69327346	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	69327347	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	69327350	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	69327387	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	69327440	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.125
10	70149693	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	70149733	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.423077
16	70248685	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	70249286	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	70249811	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	70354367	A->G	+	ENSG00000198887	SMC5	protein_coding	three_prime_utr	.	.	Alu	0.0512821
14	70367338	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70372975	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	70372977	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	70373115	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	70589101	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	70589188	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	70589220	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.25
6	70589226	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	1
6	70589265	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.9375
6	70589266	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.705882
6	70589270	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.1
6	70589283	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	70589331	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.2
6	70589332	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	71702345	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.214286
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.428571
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.470588
10	72234998	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	72235000	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.4
10	72235194	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.357143
10	72235234	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.214286
10	72235263	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.307692
10	72235273	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	72235305	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.545455
10	72235309	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.4
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.368421
11	72286562	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	72287451	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.5
11	72287508	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72287516	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	72287555	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72287577	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72287585	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72287586	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.3
11	72289708	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	72590969	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.352941
15	72591101	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.125
15	72591102	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.2
10	73248995	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0384615
10	73249026	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.039604
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0350877
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0945946
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.268966
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.132743
10	73249087	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0336134
10	73249089	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0438596
10	73249097	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0978261
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0588235
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.191011
10	73249120	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.021978
10	73249135	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0204082
10	73249155	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0366972
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.564516
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.170213
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.170732
10	73249834	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	73249907	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	73249910	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.125
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0566038
10	73250018	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0612245
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	73250040	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0571429
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.132075
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	73250260	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.08
6	73516560	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
6	73594290	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	74058071	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.470588
14	74058083	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	74058084	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	74058160	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	74058840	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	74060272	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.357143
7	74231742	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0461538
7	74231776	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0793651
7	74231777	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.027027
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0330579
7	74231844	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0648148
7	74231856	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0283019
7	74231857	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	74231859	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.02
7	74231883	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0288462
7	74231884	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0380952
7	74231926	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.025974
7	74231946	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
7	74231966	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	74621779	A->G	-	ENSG00000168411	RFWD3	protein_coding	three_prime_utr	.	.	Alu	0.0434783
14	74735633	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	74735669	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.458333
14	74735699	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	1
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	1
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.107143
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.242424
14	74736031	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.178571
14	74736145	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.09375
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.46875
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	74736250	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
14	74736259	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.375
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	74736297	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	74736301	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.75
14	74736337	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74736362	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.107143
14	74736364	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.535714
14	74736394	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	75445412	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	1
16	75445424	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	75445426	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.727273
16	75445515	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	75445523	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.4
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.2
12	75496034	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.3
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.3
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.909091
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.954545
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.190476
12	75496317	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	75599285	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	75599319	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	75599337	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	75599363	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	75663650	A->G	+	ENSG00000115364	MRPL19	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75890171	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	75917500	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.3
4	75917659	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	75917660	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	75943131	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75943974	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75944218	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75944921	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	76779133	A->G	+	ENSG00000092931	MFSD11	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	76779160	A->G	+	ENSG00000092931	MFSD11	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	77025649	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	77025667	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.416667
11	77025668	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	77025680	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.8
7	77781742	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	77781797	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	77781864	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.107143
7	77781865	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.1
7	77781874	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	77827514	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.116279
X	77827557	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
X	77827606	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
X	77827609	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0263158
X	77827610	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.025974
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0806452
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.152542
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	77828117	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.391304
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.466667
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.533333
11	78068619	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.2
11	78068663	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.217391
11	78069056	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.1
11	78069065	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	78069071	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.384615
17	78207449	A->G	+	ENSG00000183077	AFMID	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	78207486	A->G	+	ENSG00000183077	AFMID	protein_coding	three_prime_utr	.	.	Alu	0.0526316
9	78273626	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.5
9	78273632	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78273636	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78275484	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	78275485	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.125
9	78275699	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.25
9	78275800	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	78275840	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	79590313	A->G	-	ENSG00000177425	PAWR	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	80436378	A->G	+	ENSG00000122378	FAM213A	protein_coding	three_prime_utr	.	.	Alu	0.2
5	80627466	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.028169
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0416667
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.1
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	80627502	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0322581
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.323077
5	80627513	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0422535
5	80627514	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0294118
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	80627541	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0363636
5	80627547	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0701754
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	80627578	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0512821
5	80627605	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.130435
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	80627627	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	80628036	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	80628038	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	80628047	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	80628087	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	83005358	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	83005400	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.35
15	83005413	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.15
6	83036256	A->G	-	ENSG00000118420	UBE3D	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	83036297	A->G	-	ENSG00000118420	UBE3D	protein_coding	three_prime_utr	.	.	Alu	0.25
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0537634
2	85319274	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0206186
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0217391
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.5
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.164179
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.1375
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0631579
2	85319448	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0421053
2	85610674	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	85610702	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	86025025	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	89182510	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	89182517	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	89182578	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	89182620	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	89182706	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	89182709	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	89183644	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.347826
1	89183712	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.12
1	89183741	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	89183804	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	89183811	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.45
16	89563628	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	89564454	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.0425532
6	89636818	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	89636948	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.08
15	90083261	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.021978
15	90083315	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0428571
15	90083321	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
15	90083336	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
15	90083360	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
15	90083405	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0545455
15	90083406	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0535714
15	90277681	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
7	92090579	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	92394641	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	92395568	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	92395585	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	92395591	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	94415844	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.047619
11	94417249	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	94417250	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.466667
10	94612687	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.4
10	94612805	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.454545
10	94612806	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.5
9	96891590	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	97673048	A->G	+	ENSG00000136937	NCBP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.075
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0465116
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.241379
12	98548865	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0617284
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0285714
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.193548
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.5625
12	98549069	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0392157
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.9375
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.292683
12	98549126	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	98549240	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	1
12	98549264	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0340909
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0364964
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.5
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.221053
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	1
12	98549371	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0363636
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0406504
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0322581
12	98549424	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0243902
2	99195939	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.526316
2	99196394	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	99196400	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.9
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.4
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.3
2	99196540	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.4
15	99387172	A->G	-	ENSG00000168904	LRRC28	protein_coding	three_prime_utr	.	.	Alu	0.2
1	100024279	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	100024436	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	100232510	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	100232524	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.5
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.842105
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	1
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.555556
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.08
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.277778
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.47619
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	101009652	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	101010290	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.3
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.454545
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.341463
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.075
7	101091541	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.097561
7	101091556	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.05
7	101091571	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.190476
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.136364
7	101091574	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	101091576	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.0638298
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.633333
7	101091606	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.261905
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.5
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.243902
7	101093709	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.309524
7	101093710	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.404762
7	101096121	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	101271549	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	101271556	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.3
14	102036976	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.266667
7	102448761	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
7	102449354	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
7	102449382	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0533333
7	102449480	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0280374
7	102449495	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
7	102449560	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
7	102449580	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0470588
7	102449600	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.027027
7	102449750	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
7	102449758	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.031746
7	102449866	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	102450004	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.178571
7	102450050	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
7	102450991	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0545455
7	102451036	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
7	102451064	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	102451080	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.184615
7	102451081	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.112903
7	102451122	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
14	103590740	A->G	+	ENSG00000256053	APOPT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	108365908	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	108365909	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	109463083	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.4
6	109463098	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	109463124	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.235294
6	109463257	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	109689104	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	109852050	A->G	-	ENSG00000139433	GLTP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	111270404	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.636364
6	111270407	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.2
12	111468786	A->G	-	ENSG00000204842	ATXN2	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	112143404	A->G	-	ENSG00000255292	AP002884.3	protein_coding	three_prime_utr	.	.	Alu	0.0263158
9	112685199	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	119538545	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	119538555	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	119538562	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.529412
X	119538572	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.47619
X	119538598	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.352941
X	119538614	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.444444
X	119538615	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.277778
X	119538629	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.714286
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.785714
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.5
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.4
X	120437883	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0240964
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.03125
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.833333
12	120460855	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	120461175	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	120461195	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	120461196	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	1
12	120461208	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	1
12	120461261	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.115385
12	123257353	A->G	+	ENSG00000130921	C12orf65	protein_coding	three_prime_utr	.	.	Alu	0.125
12	123257362	A->G	+	ENSG00000130921	C12orf65	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	123411415	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411593	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	123411615	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	123411655	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	123411682	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	123411726	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411727	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	123411796	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411797	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.4
12	123411813	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123412196	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123412280	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123661520	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.08
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.583333
12	123661553	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	123661809	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
12	123661825	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.102564
12	123661862	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.102564
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	123662121	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123910692	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1
X	123910706	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	123910709	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.08
X	123910721	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	123910747	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	123912484	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.657143
X	123912496	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
X	123912567	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	123912865	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123912870	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.866667
X	123912891	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123912922	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123913257	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123913262	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.619048
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	123913320	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.375
X	123913411	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	125029328	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	125029411	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	125029425	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.027027
12	125029452	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.031746
12	125029466	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0350877
11	125656230	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.173913
11	125656240	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	125656244	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.75
11	125675961	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	125676007	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
11	125676008	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.225
11	125676033	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
11	125676034	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
5	126625436	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625474	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.5
5	126625476	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.5
5	126625477	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	126625554	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	126625562	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126625741	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625763	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	126625840	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625842	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625856	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625862	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	126625919	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	126625931	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.4
5	126625956	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	126625957	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	126626118	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.277778
5	126626155	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	126626330	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	126626338	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.103448
5	126626394	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126626447	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.05
5	126626452	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	126626477	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	126626483	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.15625
5	126626616	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0526316
5	126626876	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	127843857	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.206897
2	127843864	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	127843890	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.583333
2	127844792	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.25
2	127845461	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	127845504	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	127845540	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	127845576	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.588235
2	127845578	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	127845582	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	127845633	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	128036907	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.5
4	128036916	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	128036930	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	128036931	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.411765
4	128036939	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	128036940	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	128036972	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	128037228	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.810811
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.432432
2	128192941	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	128192968	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	128192974	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	128193132	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128193316	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128193346	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128193381	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.714286
2	128193391	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.642857
2	128193417	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128193418	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.538462
2	128193426	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	128193432	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	128193452	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.409091
2	128193465	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.637931
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.408163
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.175
2	128194146	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128194367	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	128194510	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	128195126	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
9	128305472	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.818182
9	128305476	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	128305763	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	128305782	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.4
9	128305815	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	128305828	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.266667
9	128306578	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.625
9	128306632	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.4
9	128306656	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128306657	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128306771	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.307692
9	128306773	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
9	128306811	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128306828	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128306844	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.818182
9	128306864	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.285714
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
7	128502779	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.8
7	128504825	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	128504837	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128505147	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131201055	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.4375
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	131201104	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.259259
5	131201137	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131201149	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201152	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	131201153	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	131201156	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	131201167	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.185185
5	131201199	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.107143
5	131201203	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.12
5	131201453	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131201461	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.190476
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	131201527	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	131201530	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201531	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201560	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.3125
5	131201572	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	131201576	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131201588	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131201598	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.26087
5	131201599	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.875
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	131201909	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131202304	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131202305	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131202373	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.583333
5	131202374	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.75
5	131202379	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.9
5	131202443	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.583333
5	131202444	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.727273
5	131202611	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.454545
5	131202612	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.454545
5	131202615	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131202616	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131202629	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.4
5	131202637	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131202645	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.657895
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.44186
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.25641
12	132721430	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0392157
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	132721436	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0681818
12	132721448	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0465116
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.375
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.304348
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.304348
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.114286
12	132721693	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.5
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.571429
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	132722351	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.108108
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	132722487	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.03125
12	132769978	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.125
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.2
5	134402261	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0512821
5	134402273	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.045977
5	134829837	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	134829838	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.125
7	135676135	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	141945332	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.7
3	141945333	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141945396	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.172414
3	141945418	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	141946785	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.5
3	141946786	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	141946879	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.3
3	141946880	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141947450	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
3	141947482	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.114286
3	141947483	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	141947547	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	141947553	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.611111
3	141947579	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.25
3	141947583	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	141947585	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	141947588	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.346154
3	141948285	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	141949870	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	141949872	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.421053
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	141949905	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	141949976	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	141949978	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141949984	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	141950002	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	141950003	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	141950025	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.482759
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.441176
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.794118
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.315789
1	145745364	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.2
1	145745486	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.2
1	145745497	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.25
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.727273
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.375
1	145745554	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.5625
1	145745555	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.125
1	145745573	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	145745596	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.5625
1	145746143	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	145759031	A->G	-	ENSG00000186314	PRELID2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	145921978	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.318182
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.428571
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.26087
1	145921994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.227273
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.533333
1	145922041	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0909091
1	145922058	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.130435
1	145922061	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.266667
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.464286
1	145922076	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.275862
1	145922100	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0689655
1	145922137	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0869565
1	145922141	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.636364
1	145922142	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.5
1	145922148	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.6
1	145922162	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.424242
1	145922167	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
1	145923014	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.8
1	145923018	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.117647
1	145923019	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.157895
1	145923068	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.1
1	145923078	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.75
1	145923094	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.666667
1	145923101	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.133333
1	145923104	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.1875
1	145923108	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	145923124	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
1	145923130	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	145923134	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	145923163	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.4
6	149591088	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	149724612	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.15
6	149724613	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	1
6	149724614	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	149724619	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.45
6	149724620	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149724651	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.846154
6	149724652	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.75
6	149724748	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	1
6	149724764	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	149724782	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.380952
6	149724783	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	149724784	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149724790	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	149724792	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	1
6	149724793	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	1
6	149724815	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.458333
6	149724816	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149724821	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.16
6	149724861	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0967742
6	149724862	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.766667
6	149724884	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	149725201	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	149725204	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	149725213	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.368421
6	149725279	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.25
6	149725296	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.909091
6	149725337	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	149725348	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.235294
6	149725349	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.25
6	149725350	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149725359	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.583333
6	149725409	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.8
6	149725537	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.846154
6	149725542	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	149725550	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	150308716	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308768	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	150731158	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150731276	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	150731305	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	150731306	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.08
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.653846
1	150731362	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.7
1	150732010	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.3
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0273973
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.139535
1	150732797	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0754717
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.132075
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.103896
1	151874535	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	154011217	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0309278
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	154011309	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
3	155943084	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.3
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.970588
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.685714
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.565217
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.75
3	156540549	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.12
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.228571
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.205882
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.184211
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.146341
3	156541581	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.358209
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
7	156970032	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	156970033	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	156970054	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.615385
7	156970068	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	156970189	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.416667
7	156970212	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.615385
7	156970221	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
5	157740784	A->G	+	ENSG00000113272	THG1L	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	157740793	A->G	+	ENSG00000113272	THG1L	protein_coding	three_prime_utr	.	.	Alu	0.25
6	159679824	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0273973
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0853659
6	159679878	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0493827
6	159680691	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0681818
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	160029864	A->G	-	ENSG00000143315	PIGM	protein_coding	three_prime_utr	.	.	Alu	0.08
1	160996511	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.28125
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	160996583	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.714286
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.125
1	160998027	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.5
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.391304
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.380952
1	160998106	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.478261
4	165075117	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165075134	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	165075135	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	165075136	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.526316
4	165075137	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.368421
4	165075212	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	165075214	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	165075533	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.555556
4	165075758	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
4	165075773	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	165078028	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165078036	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165078996	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.15
2	171323437	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.2
5	175529175	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	175529328	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	175529329	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.25
5	175529334	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	176331637	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	177227884	A->G	+	ENSG00000116044	NFE2L2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	177227889	A->G	+	ENSG00000116044	NFE2L2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	179073562	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179074957	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	179074965	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.375
1	179074975	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	179075045	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.3
1	179075144	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	1
3	179397868	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	183491274	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.3
3	183491277	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.2
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	184792095	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.5
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.25
1	184792213	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	189747240	A->G	+	ENSG00000151687	ANKAR	protein_coding	three_prime_utr	.	.	Alu	0.3
3	195527784	A->G	-	ENSG00000184203	PPP1R2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	195527785	A->G	-	ENSG00000184203	PPP1R2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	196353654	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0434783
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.155556
3	196353662	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	196353680	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.121212
3	196353682	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0857143
3	196353714	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.37037
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.521739
3	196353759	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	196734363	A->G	+	ENSG00000163964	PIGX	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	197884887	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	197886260	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	197886618	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.25
3	197886619	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.4
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	200978742	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	201164144	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.15
2	202879169	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297658	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297723	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	203297791	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297838	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297864	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	203297865	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	203297973	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	203298284	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	203305462	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	203305474	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	206122202	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	206122372	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	207612372	A->G	-	ENSG00000144401	METTL21A	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	207612373	A->G	-	ENSG00000144401	METTL21A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	207612381	A->G	-	ENSG00000144401	METTL21A	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	211941560	A->G	-	ENSG00000143493	INTS7	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216501757	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.340909
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.641509
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.146341
2	216501804	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0344828
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.122807
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.150943
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.358491
2	216501822	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.857143
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	216501883	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	216501892	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.108696
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.179487
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.135135
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.205882
2	216501928	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	216501950	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216501951	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.259259
2	216501976	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.35
2	216501990	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.909091
2	216501999	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216502070	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	216502077	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	216502080	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.207547
2	216502112	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.411765
2	216502152	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.344828
2	216502177	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	216502178	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216502180	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	216502206	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.258065
2	216502216	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.121951
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0408163
2	216502248	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
1	220057919	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	220057921	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.6
1	220057933	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.6
1	220057934	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	220057988	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	1
1	220057996	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	220058005	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	220058076	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	220058142	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.388889
1	220058145	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.894737
1	220058640	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	220058655	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	220058801	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	220058802	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	225786982	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.212121
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.24
1	225984164	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	226707469	A->G	-	ENSG00000143772	ITPKB	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	230372610	A->G	+	ENSG00000185404	SP140L	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	230372645	A->G	+	ENSG00000185404	SP140L	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	247877385	A->G	+	ENSG00000162722	TRIM58	protein_coding	three_prime_utr	.	.	Alu	0.142857