Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	AA_change	Amino_Acid	Repeat	AN62_LZ
19	1036885	A->G	+	ENSG00000064666	CNN2	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.142857
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.431034
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0793651
19	21538049	A->G	+	ENSG00000197013	ZNF429	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.307692
21	33262623	A->G	+	ENSG00000159110	IFNAR2	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0769231
3	69076414	A->G	-	ENSG00000144744	UBA3	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.4
15	101288449	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	upstream_gene_variant	.	Alu	0.1
10	112449659	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.157895
10	124762529	A->G	-	ENSG00000258539	AC068896.1	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.125
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0462963
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.5
1	225786942	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.166667
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.266667
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	CDS	.	.	Alu	0.727273
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.3
19	2292005	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.2
3	9987093	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.215686
6	31836310	A->G	+	ENSG00000204387	C6orf48	protein_coding	five_prime_utr	.	.	Alu	0.2
21	37410602	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.266667
21	37410605	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.6
21	37410607	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.333333
21	37410645	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.181818
12	56731526	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.307692
12	56731531	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.153846
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.130435
10	72220110	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.2
10	72220172	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0833333
10	72220174	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0740741
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.08
10	72220232	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0606061
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.105263
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.151515
3	179325052	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.125
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.1
X	304085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	304088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
17	399238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
17	400428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
17	400429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
17	400768	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	400825	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
16	587945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
16	588486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.875
16	588524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
18	697494	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.4
18	697841	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.6
18	698044	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.142857
18	698045	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.285714
18	698050	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.166667
18	744492	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.3
12	764460	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.272727
12	764477	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.105263
12	764480	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.25
12	764486	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.1
12	764489	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.166667
12	764507	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.105263
12	764513	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.666667
12	764515	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.294118
12	764593	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.2
18	787197	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.153846
18	787232	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0769231
18	787238	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.08
18	787244	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0833333
18	787264	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.684211
18	787268	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	787279	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.263158
18	787282	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.25
18	787326	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.142857
18	787598	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.25
18	787629	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.363636
18	787634	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.363636
11	927606	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.4
11	927608	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.181818
11	927688	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.3
16	1322879	A->G	+	ENSG00000103275	UBE2I	protein_coding	Intergenic	.	.	Alu	0.2
X	1356685	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0952381
X	1356686	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.105263
X	1356689	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.105263
X	1356690	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.176471
X	1357090	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1357396	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1357617	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.411765
X	1357618	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.1875
X	1357634	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
X	1357643	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.25
X	1363003	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.166667
X	1363018	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0909091
X	1363530	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.272727
X	1363561	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.142857
X	1363805	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3125
X	1363812	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3125
X	1363817	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1363858	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.6875
X	1364266	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.266667
X	1364329	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.4
X	1364379	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.272727
X	1364408	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.307692
X	1364409	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1364478	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.357143
X	1364486	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.538462
X	1364563	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.473684
X	1364603	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.08
X	1364673	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0909091
X	1364674	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0869565
X	1364677	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1364681	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.0555556
X	1365069	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1381346	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.727273
X	1382798	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
X	1382837	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1382889	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1382890	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1382900	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	1382912	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1382916	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1382959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
X	1382989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
X	1382990	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383012	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383064	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383069	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
X	1383123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1383135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
X	1383150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
X	1383184	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383189	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383206	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1383212	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.421053
X	1383215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	1383246	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383358	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1383408	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.32
X	1383434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1383438	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.526316
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
X	1383467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.388889
X	1383499	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
X	1383503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.258065
X	1383528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
X	1383540	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16129
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.24
X	1383610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
X	1383794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	1383795	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	1383849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1383870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
X	1383872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
X	1383919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	1383929	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1384034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	1384083	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
X	1384095	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
X	1384128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1384147	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1384165	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1384390	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1384402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1384412	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1384439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1384977	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
X	1384994	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1384997	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.555556
X	1385006	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.208333
X	1385023	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.789474
X	1385104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1385192	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	1385218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1385222	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	1388010	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0714286
17	1388011	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.103448
17	1388015	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0714286
17	1388022	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.6
17	1388063	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.25
17	1388096	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.2
17	1388394	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.142857
17	1388661	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.153846
1	1396676	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	1396717	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.333333
1	1871403	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1871419	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.5
1	1872064	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1872153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.125
1	1872176	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.117647
1	1884238	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1886300	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.538462
1	1886304	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.416667
17	2038187	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.3
17	2038204	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.642857
17	2038210	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.105263
17	2038218	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.5625
17	2038245	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.714286
16	2259700	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.333333
16	2259745	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.153846
16	2260241	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.2
16	2260248	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.3
16	2260252	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.153846
16	2260253	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.153846
16	2260271	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.285714
16	2260338	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.4
19	2292318	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.384615
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2292343	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
4	2499984	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.333333
4	2500037	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2502882	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.5
4	2502899	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2502930	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.5
4	2502963	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2543751	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
X	2744183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	2744192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	2744279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
X	2744728	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.631579
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.789474
X	2744742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	2745680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	2745779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	2757028	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.5
7	2757030	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.3
7	2757314	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.166667
7	2757315	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.416667
7	2757318	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.214286
7	2757330	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.133333
16	2938884	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.363636
16	2938885	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.3
16	2939694	A->G	-	ENSG00000059122	FLYWCH1	protein_coding	Intergenic	.	.	Alu	0.230769
18	2996136	A->G	-	ENSG00000101577	LPIN2	protein_coding	Intergenic	.	.	Alu	0.333333
19	3181273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	3181274	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
19	3181462	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
19	3181667	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
19	3182353	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	3182366	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	3182378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	3182622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	3182782	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	3182802	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	3182819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	3182837	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	3183724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	3244141	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.153846
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.157895
2	3541909	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.1
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.157895
2	3541935	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.117647
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.217391
2	3541987	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.133333
2	3543851	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.272727
11	3701753	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3701814	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.6
11	3701818	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3701822	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3701824	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.6875
11	3722233	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.6
11	3782636	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3782655	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.153846
17	3911107	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.285714
17	3911206	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.2
17	3911215	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.125
17	3911233	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.133333
17	3911276	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.130435
17	3912469	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	3912794	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.272727
20	3912803	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.142857
20	3912829	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.2
20	3985801	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3985817	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3985850	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3985876	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.111111
11	4097166	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.363636
16	4462346	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.25
16	4462350	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.357143
16	4462356	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4462421	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.2
16	4462426	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.3
16	4463127	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4463128	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.2
16	4463141	A->G	-	ENSG00000153406	NMRAL1	protein_coding	Intergenic	.	.	Alu	0.545455
16	4816738	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.384615
16	4816740	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.230769
16	4848986	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.333333
16	4849045	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.111111
16	4849050	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.1
3	5127752	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.333333
3	5127758	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.105263
3	5127935	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.181818
7	5196991	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	5196992	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.1
7	5197005	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.142857
7	5197033	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	5197037	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.142857
7	5197094	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.181818
17	5374231	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.2
17	5374760	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.3
17	5375004	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.15
17	5375014	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	5398003	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.117647
7	6135530	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.4
7	6397120	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.333333
7	6397826	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.181818
1	6844549	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	6849779	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	6849780	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	8404057	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.3
1	8404062	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
1	8404295	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.3
19	8472683	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.181818
19	8472748	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.3
1	8582638	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.2
18	8616722	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.153846
18	8616814	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.352941
18	8616818	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.1875
18	8616831	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.333333
18	8616844	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.133333
18	8616849	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.75
18	8616853	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.111111
18	8616877	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.166667
18	8616913	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.615385
11	9194749	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9230420	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9289176	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.230769
11	9444492	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.416667
11	9444497	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.3
4	9538619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
4	9538663	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
2	9607153	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.217391
2	9607154	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.304348
2	9607417	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.0769231
1	9705418	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.166667
1	9705443	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.388889
1	9705463	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.473684
1	9705480	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.133333
11	9838017	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.454545
1	9927962	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
1	9928660	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.272727
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.395349
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0655738
3	10152258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	10152262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	1
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
3	10152567	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.692308
3	10152572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.425
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
3	10152645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.151515
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.444444
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
3	10152733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	10152773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.634146
3	10152888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102564
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10152966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10152967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10152993	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
3	10153044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.104167
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
3	10153089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10153116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
3	10153118	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0350877
3	10153126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0576923
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10153163	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0240964
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
3	10153190	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.128571
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102941
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347222
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.056338
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0925926
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0888889
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108696
3	10153298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.163636
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.175439
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.155556
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.146341
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.387097
3	10153379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28125
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.206897
3	10153408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.592593
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	10167258	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.3
3	10309021	A->G	-	ENSG00000157020	SEC13	protein_coding	Intergenic	.	.	Alu	0.142857
3	10309023	A->G	-	ENSG00000157020	SEC13	protein_coding	Intergenic	.	.	Alu	0.333333
3	10309066	A->G	-	ENSG00000157020	SEC13	protein_coding	Intergenic	.	.	Alu	0.181818
5	10368782	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	10368793	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.4
5	10368794	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.25
5	10759837	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.2
5	10759840	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.3
19	10933063	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.307692
19	10963242	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.153846
19	10963293	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.363636
12	11084924	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.153846
12	11084950	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.125
12	11084977	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.272727
12	11085092	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.2
12	11085099	A->G	-	ENSG00000231887	PRH1	protein_coding	Intergenic	.	.	Alu	0.8
19	11107883	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.272727
10	11196838	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
19	11450009	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.47619
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.388889
19	11450392	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.6
19	11450402	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.1
19	11450409	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.95
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.53125
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0606061
10	11583326	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.5
12	11660468	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11660478	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.230769
12	11660479	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.307692
12	11660484	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.153846
12	11660519	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.272727
12	11660520	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.272727
12	11660527	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11660562	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.416667
12	11734358	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.157895
12	11734376	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.142857
12	11734397	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.111111
12	11734447	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.4
12	11777093	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11808985	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11808993	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.133333
12	11809029	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
19	11835315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	11845097	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.3
12	11845731	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
19	11865933	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intergenic	.	.	Alu	0.454545
19	11891176	A->G	+	ENSG00000198429	ZNF69	protein_coding	Intergenic	.	.	Alu	0.8
19	11991918	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
19	12004371	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
10	12374175	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.157895
10	12578653	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.363636
10	12578675	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.142857
10	12578692	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.466667
19	12660896	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.166667
Y	13386372	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13386812	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13386826	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	13386834	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.1875
Y	13386835	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.125
Y	13386916	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.533333
Y	13386917	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	13386921	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.125
Y	13386923	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.176471
Y	13386953	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.214286
Y	13386977	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.214286
Y	13396018	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.111111
Y	13396031	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.470588
Y	13396104	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.583333
Y	13396105	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.25
18	13459120	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.3
18	13459483	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.333333
18	13459487	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.363636
6	13648212	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
6	13648246	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.210526
6	13648261	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.142857
6	13648286	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	1
6	13648308	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.307692
6	13648315	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.1875
6	13648349	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.2
6	13648351	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.125
6	13650852	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.2
11	13703891	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.454545
11	13703989	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.133333
11	13703994	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.153846
1	13755996	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.761905
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.590909
21	14973904	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
21	14982122	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.214286
21	14982131	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.153846
10	15075711	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
10	15075717	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	15075729	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
10	15075744	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
3	15248799	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.3
3	15248841	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.25
3	15248846	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.333333
3	15248875	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.105263
3	15248911	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.238095
3	15248916	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.277778
6	15343149	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
19	15345663	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
19	15382708	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.25
19	15384437	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.166667
1	15688531	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.384615
16	15952839	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.294118
16	15952929	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.136364
16	15952932	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	15953225	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15953304	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
17	16050290	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
17	16107161	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.2
6	16256095	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.4
6	16256096	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.5
6	16256141	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.181818
6	16256409	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.181818
6	16256410	A->G	+	ENSG00000137198	GMPR	protein_coding	Intergenic	.	.	Alu	0.166667
3	16313318	A->G	-	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.133333
17	16383008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	16383291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
2	16458841	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	16637422	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.5
19	16637429	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.3
19	16638001	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.125
19	16638013	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.25
19	16638185	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.866667
19	16638186	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16638215	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.941176
19	16638220	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.176471
19	16638369	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16638371	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	1
19	16638389	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	1
19	16638406	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16638568	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16640190	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.125
19	16640214	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.176471
19	16640215	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.176471
19	16640221	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.285714
19	16640265	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.166667
19	16640280	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.0909091
19	16640281	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.0869565
19	16644163	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16644364	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16644373	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16644466	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16644549	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
11	16740426	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16740482	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.416667
11	16740489	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.571429
11	16740521	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.25
11	16740550	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.1
11	16740562	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.210526
11	16740573	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0869565
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.352941
11	16740587	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.136364
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.227273
11	16740838	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	16740839	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.230769
11	16740930	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.125
11	16740938	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.130435
11	16740941	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.173913
11	16740942	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.173913
11	16740943	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.173913
11	16740944	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.130435
11	16740949	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.235294
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.611111
11	16756395	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.545455
11	16756409	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.307692
11	16756435	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.153846
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.3125
11	16756451	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.4
11	16756468	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	1
11	16756508	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.133333
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.133333
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.333333
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.526316
11	16756654	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.157895
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.692308
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.727273
19	16856807	A->G	+	ENSG00000127511	SIN3B	protein_coding	Intergenic	.	.	Alu	0.6
1	17049835	A->G	-	ENSG00000117118	SDHB	protein_coding	Intergenic	.	.	Alu	0.6
19	17081594	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17083860	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17083885	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17084635	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17084784	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17084785	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.307692
19	17084790	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.125
19	17097160	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17097174	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17098747	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.25
19	17098751	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17099015	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17103123	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17103794	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.533333
19	17103801	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17103807	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.533333
19	17105384	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17105436	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.3
19	17105470	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17105477	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.25
11	17297829	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.375
11	17298325	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	17298328	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.4
11	17298375	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.230769
11	17298384	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17298402	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	17298405	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	17298453	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1
11	17298461	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.545455
11	17298464	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.136364
11	17298465	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.285714
11	17298509	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17298558	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17336084	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.117647
11	17336087	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.235294
11	17336100	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.307692
11	17336104	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17336674	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17336994	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	17337018	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0740741
11	17337041	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17337045	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	17337070	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17337126	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.272727
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.538462
11	17337807	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
16	17456476	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.25
16	17456487	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.2
8	17997913	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.103448
8	17997916	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.0689655
6	18237964	A->G	-	ENSG00000124795	DEK	protein_coding	Intergenic	.	.	Alu	0.2
17	18271812	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.166667
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.727273
17	18272760	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.153846
17	18272776	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.5
17	18272804	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.363636
11	18512905	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.25
11	18512907	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.333333
11	18512910	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.545455
11	18521429	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.291667
11	18521431	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.291667
11	18521471	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18521774	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.214286
11	18521944	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.214286
19	18909579	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.130435
19	18909586	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.08
19	18909595	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.230769
19	18909604	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0571429
19	18909608	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.111111
19	18909615	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.136364
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.192308
19	18909630	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.16
19	18909704	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0869565
19	18909745	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18909786	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.1875
19	18909792	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.105263
9	19307197	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.363636
9	19307212	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.181818
9	19307248	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.3
9	19307274	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.181818
9	19307288	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.3
22	19438785	A->G	-	ENSG00000100084	HIRA	protein_coding	Intergenic	.	.	Alu	0.111111
19	19664670	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
13	19714580	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.181818
13	19714702	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.111111
13	19714732	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.105263
13	19985927	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.153846
13	19985957	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.25
13	19986938	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.105263
13	19986984	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0869565
13	19986998	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0952381
13	19987011	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.166667
13	19987328	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19987338	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.153846
13	19987364	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.0952381
13	19987393	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.235294
13	19987403	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.142857
13	19987510	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.105263
13	19987715	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	19987749	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19987864	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.214286
13	19995054	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.25
13	19995081	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.142857
3	20044219	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.5
3	20044226	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.181818
10	20247423	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20267160	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.272727
2	20267167	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20267171	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
14	20452843	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intergenic	.	.	Alu	0.181818
6	20552083	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.666667
6	20552084	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.666667
6	20552228	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.1875
1	20646029	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.363636
1	20646069	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.454545
1	20646171	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.153846
1	20646173	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.333333
1	20646187	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.4
1	20647004	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.285714
1	20647040	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.230769
1	20647185	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.214286
1	20647262	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20647303	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.142857
1	20647538	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20647595	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.230769
1	20647631	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20647635	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.142857
1	20647915	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.103448
1	20647945	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.148148
1	20648008	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.1875
16	20685580	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.075
16	20685593	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0588235
16	20686794	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0338983
16	20697923	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	20697939	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.147059
16	20697940	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	1
16	20698135	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.111111
16	20698139	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.25
16	20698565	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.55
16	20698570	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.2
16	20698583	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.111111
16	20698638	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.6
16	20698761	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	1
16	20698771	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.333333
16	20705252	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.642857
16	20705258	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.333333
16	20705293	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.25
16	20705321	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.285714
16	20739586	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
1	20751106	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.538462
1	20755544	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20760115	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	21150720	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21150733	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	1
1	21150789	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.5
1	21151377	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.142857
1	21151510	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.157895
19	21316199	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.4
19	21316206	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
19	21316262	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.416667
19	21316263	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.181818
19	21316289	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.2
19	21316376	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.2
19	21316377	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.2
19	21316399	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
19	21406102	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.2
13	21433234	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.307692
13	21441458	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.2
13	21441459	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.466667
19	21445753	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.4
19	21445760	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.5
19	21451676	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.25
19	21451694	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	21459933	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	21459935	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	21462945	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.230769
19	21538502	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.5
13	21548998	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.3
13	21563941	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
22	21616955	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.272727
19	21760853	A->G	-	ENSG00000197020	ZNF100	protein_coding	Intergenic	.	.	Alu	0.166667
3	21895466	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.125
1	22073360	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.2
1	22073419	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.3
1	22073428	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.181818
6	22081469	A->G	+	ENSG00000272168	CASC15	lincRNA	Intergenic	.	.	Alu	0.3
8	22617076	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.1875
8	22617078	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.117647
8	22617084	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.1875
8	22617093	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.875
8	22617094	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.5625
1	23037219	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.357143
1	23037236	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.333333
1	23037245	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.357143
14	23082956	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.4
1	23152758	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.2
1	23154349	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.454545
1	23154417	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.25
1	23154427	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	23154440	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	23154464	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.823529
1	23154487	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.130435
1	23154505	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.565217
1	23154525	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.75
1	23154533	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.9375
1	23154572	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.25
1	23154573	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	23154783	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.333333
1	23154788	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.105263
7	23515368	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0952381
7	23515762	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.266667
7	23515827	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.333333
7	23515918	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.416667
7	23515972	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.5
7	23516023	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23516024	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23516032	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23516133	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.181818
7	23518846	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.153846
22	23731636	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
22	23731645	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
22	23731646	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
22	23731690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	23769801	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.5
2	23781499	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23781502	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23781537	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.545455
2	23781582	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.214286
2	23781603	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.266667
2	23781951	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23781957	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.588235
2	23781987	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.157895
2	23781992	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
2	23781993	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1875
2	23782012	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23782044	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.15
2	23782089	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23833883	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.105263
2	23841004	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
2	23845672	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.384615
2	23857874	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
19	24055324	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
19	24055344	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24055349	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.636364
19	24055379	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
19	24055396	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.461538
19	24055418	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24055420	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24055424	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.153846
19	24061820	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.181818
19	24061882	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.285714
X	24078126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0291262
19	24089935	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24090001	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.571429
19	24090002	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.714286
19	24090163	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.15
19	24097596	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24097620	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24097626	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.153846
14	24170976	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
14	24170977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
14	24170988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
14	24212512	A->G	-	ENSG00000254505	CHMP4A	protein_coding	Intergenic	.	.	Alu	0.1
2	24327436	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	24327493	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.142857
2	24327494	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.142857
2	24327500	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	24347000	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	24347083	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.2
2	24357957	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.133333
13	24424783	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
13	24424800	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
13	24453089	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
2	24523678	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.277778
2	24523740	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.125
2	24523805	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.266667
2	24524377	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.2
2	24524433	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.5
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.16
22	24573021	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.533333
22	24573054	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.153846
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.25
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.210526
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0606061
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.4
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24573617	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0416667
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.228571
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.296296
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.357143
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0909091
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.09375
22	24573725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.09375
22	24573726	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0588235
22	24573734	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0588235
22	24573766	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.04
22	24573787	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.135135
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.291667
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.173913
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.380952
22	24574604	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0540541
22	24574615	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0645161
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.725
22	24574646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.047619
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.186047
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.369565
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.325581
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.214286
22	24574681	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24574703	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.151515
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.388889
22	24574708	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0833333
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.25
22	24574751	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0517241
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.516667
22	24574764	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0769231
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.131148
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0327869
22	24574821	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0285714
1	24755524	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.2
12	25230431	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.3
12	25231226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.181818
12	25231314	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.166667
12	25231324	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.277778
12	25231356	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.111111
15	25433348	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
1	25438819	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
1	25440257	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	25440278	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0625
3	25661129	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0754717
3	25661138	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0666667
3	25661139	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0344828
3	25661167	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0392157
3	25661202	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0588235
3	25661249	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0540541
18	26169214	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.117647
18	26169218	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.111111
18	26169219	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.263158
18	26169240	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.36
18	26169241	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.384615
18	26169249	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.32
18	26169263	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.16
18	26169657	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.25
18	26169672	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.117647
18	26169683	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.368421
18	26169736	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.4
2	26269029	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.4
10	26443784	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.307692
1	26715951	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	26715952	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	26715987	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	26736230	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.333333
1	26736231	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.333333
10	26772828	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.166667
10	26773027	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.153846
10	26773313	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.294118
10	26773340	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26773350	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.2
10	26773371	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26773377	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.75
10	26773378	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.615385
12	27039431	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.08
12	27039432	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.64
12	27039482	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.4
12	27039669	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27039777	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.166667
12	27039780	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.411765
12	27039790	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.235294
12	27039902	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.153846
10	27125779	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.190476
10	27125805	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.411765
10	27125815	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.153846
10	27125821	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.363636
10	27125914	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.117647
10	27125936	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.277778
13	27141091	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.2
13	27141092	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.166667
17	27302153	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.35
17	27302155	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.105263
2	27345952	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.2
2	27345988	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.2
13	27652708	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.333333
13	27652711	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.272727
1	27818128	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.214286
1	27818145	A->G	+	ENSG00000117758	STX12	protein_coding	Intergenic	.	.	Alu	0.133333
13	28146867	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28146965	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28188521	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28188552	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.24
13	28193486	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28193492	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28193532	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28193556	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0869565
13	28193612	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28194010	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28194037	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.7
13	28194077	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28194078	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28194102	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28205619	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28205657	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.157895
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	1
10	28525689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.666667
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.777778
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.294118
10	28525742	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.142857
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.705882
10	28538357	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.181818
10	28538405	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.166667
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.388889
10	28538431	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.1
10	28538435	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.09375
10	28538462	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0666667
10	28538468	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0909091
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.137931
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0740741
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0697674
10	28538676	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0681818
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.113636
10	28539639	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.157895
10	28539685	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.133333
10	28539688	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.285714
10	28539698	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.125
10	28545312	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.25
10	28545317	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.153846
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.846154
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.153846
17	28721990	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.428571
17	28721991	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.5
17	28722007	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.230769
17	28722058	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.2
17	28722068	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.153846
17	28722100	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.3125
17	28722116	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.222222
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.333333
17	28722320	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.263158
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.307692
1	28750972	A->G	+	ENSG00000198492	YTHDF2	protein_coding	Intergenic	.	.	Alu	0.230769
1	28750973	A->G	+	ENSG00000198492	YTHDF2	protein_coding	Intergenic	.	.	Alu	0.166667
2	28763889	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.230769
2	28764268	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.117647
2	28784805	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28784814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.176471
2	28786641	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28786660	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
22	28797559	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0588235
22	28797564	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.172414
22	28797589	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0740741
22	28798405	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.111111
22	28798406	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0606061
22	28798447	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.666667
22	28798453	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.666667
22	28798516	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0487805
22	28798829	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0909091
22	28798848	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	28857071	A->G	-	ENSG00000171103	TRMT61B	protein_coding	Intergenic	.	.	Alu	0.5
2	28857072	A->G	-	ENSG00000171103	TRMT61B	protein_coding	Intergenic	.	.	Alu	0.2
16	28918244	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.166667
8	28952508	A->G	+	ENSG00000259196	HMBOX1-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	29173502	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
1	29173565	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.272727
22	29183345	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
22	29198210	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
22	29198230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
22	29198248	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
22	29198257	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
22	29198286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
22	29198292	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
16	30283306	A->G	-	ENSG00000183604	SMG1P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	30283308	A->G	-	ENSG00000183604	SMG1P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
16	30283318	A->G	-	ENSG00000183604	SMG1P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.8
7	30316039	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.7
7	30316102	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.25
7	30316103	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.333333
7	30316167	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	30316168	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.52381
13	30356688	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.181818
13	30356772	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.181818
13	30356776	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.181818
13	30357202	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.3
13	30357236	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.2
6	30492025	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.181818
17	30611871	A->G	+	ENSG00000248121	SMURF2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
17	30816768	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.166667
15	30933901	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.25
14	30980545	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.272727
1	30997842	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	31039656	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31039738	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	31049090	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.1
8	31070861	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.25
8	31070896	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.133333
8	31070899	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.375
8	31070926	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.133333
8	31071513	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.166667
8	31071582	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.333333
8	31075478	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.157895
8	31075496	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	31075599	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.111111
8	31075621	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.142857
8	31075661	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.166667
16	31121852	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.2
16	31121913	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.307692
16	31122624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.6
16	31122625	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.6
16	31122646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.466667
16	31122647	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31122671	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.136364
16	31122692	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.291667
16	31122734	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.125
16	31122754	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	1
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.347826
16	31122801	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.318182
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	1
16	31123103	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31123108	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.3
16	31123132	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.454545
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.714286
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.454545
16	31123317	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	31123342	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.227273
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.190476
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.318182
16	31123362	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.125
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.714286
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.380952
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.217391
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.615385
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.846154
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.571429
16	31123526	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0588235
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.447368
16	31123560	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.235294
16	31123610	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0588235
16	31123624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0666667
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.4375
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.444444
20	31564091	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.133333
22	31638729	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.214286
22	31638910	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.142857
22	31638932	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.545455
22	31638935	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.285714
22	31638978	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.928571
22	31638986	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.153846
22	31639105	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.4
2	31906016	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.125
2	31906065	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	31906110	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.625
2	31906149	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	31906150	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	31906151	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	31906171	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.25
2	31990481	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.111111
2	31990549	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.3
2	31990610	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	31990627	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.3
2	31990628	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.55
2	31990636	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	31990702	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	31999938	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.363636
2	32000167	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	32000257	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.363636
1	32059037	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	32059046	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.2
1	32065799	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.4
1	32065803	A->G	+	ENSG00000203325	AL445248.1	antisense	Intergenic	.	.	Alu	0.3
20	32112573	A->G	+	ENSG00000101337	TM9SF4	protein_coding	Intergenic	.	.	Alu	0.153846
1	32143420	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.6
5	32164532	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.266667
5	32164558	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1875
5	32164591	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.181818
5	32164601	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.6
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.461538
5	32165181	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.3
10	32357917	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	32357992	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.222222
10	32358127	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.333333
10	32358128	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.2
20	32361455	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.333333
10	32364131	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	32364153	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.157895
10	32364260	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.181818
2	32371048	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.578947
2	32371092	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.333333
2	32371145	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.357143
2	32371147	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.133333
2	32371444	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
17	32391938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	32392015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	32392020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
17	32392339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	32392488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
17	32392489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	32436424	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.214286
2	32462707	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32462722	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32462723	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32462728	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.357143
2	32462755	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32462772	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32507421	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
2	32520743	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
1	32547878	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.2
1	32547879	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.4
2	32553487	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.176471
2	32553488	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.222222
2	32553491	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0952381
1	32676463	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.181818
1	32676489	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.5
1	32676490	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.153846
1	32676535	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.117647
12	32701789	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	32701828	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.272727
12	32701832	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	32701853	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.363636
12	32702113	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.333333
7	32758802	A->G	+	ENSG00000229358	DPY19L1P1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
7	32758810	A->G	+	ENSG00000229358	DPY19L1P1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
1	32803104	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.153846
1	32803225	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.1
1	32803246	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.352941
1	32803250	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.176471
9	33037498	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0625
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	33038108	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.307692
11	33265883	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33268353	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	33268381	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	33268416	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33268464	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33268470	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.157895
21	33348643	A->G	+	ENSG00000142166	IFNAR1	protein_coding	Intergenic	.	.	Alu	0.0952381
21	33348728	A->G	+	ENSG00000142166	IFNAR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	33434377	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.545455
3	33434890	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0909091
21	33526453	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.153846
21	33526469	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.153846
3	33547886	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.0833333
3	33548035	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.15
3	33548820	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	33548892	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.0769231
9	33831187	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.214286
11	33877527	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.2
9	33990774	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.181818
9	33990775	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.166667
9	33990777	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.666667
9	33990804	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.307692
9	33990805	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.166667
20	34035006	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.111111
20	34109979	A->G	+	ENSG00000125977	EIF2S2	protein_coding	Intergenic	.	.	Alu	0.153846
19	34192793	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.5
19	34192832	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.4
19	34192918	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.363636
19	34192920	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.3
19	34192929	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34202735	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.117647
19	34202759	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0952381
19	34202784	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.5
19	34202794	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.333333
19	34202796	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.105263
19	34203545	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.153846
19	34203614	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.1875
19	34203618	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.285714
19	34203683	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.375
19	34203688	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.176471
19	34203724	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.125
19	34204643	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0952381
9	34206425	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.266667
9	34225659	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	34225665	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.166667
15	34326783	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.5
15	34326800	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.636364
20	34365040	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0645161
20	34365047	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0857143
20	34365519	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.25
20	34365619	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.3
20	34366315	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.133333
20	34366322	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.1
20	34366323	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.0952381
20	34366618	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.105263
20	34409916	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.2
20	34410321	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.142857
20	34431923	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.166667
19	34440689	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.181818
19	34440913	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.230769
19	34471501	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
14	34538127	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.2
21	34863692	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0540541
21	34863722	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0909091
21	34863755	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0769231
21	34961955	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.222222
21	34962031	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.105263
21	34962041	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
21	34962057	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.105263
21	34985983	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.142857
21	34995692	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0555556
10	35011280	A->G	-	ENSG00000108094	CUL2	protein_coding	Intergenic	.	.	Alu	0.2
18	35063806	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.545455
17	35076088	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.588235
17	35076167	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35076221	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.428571
17	35076261	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.117647
14	35108860	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.153846
14	35108861	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.153846
20	35725779	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0327869
19	35770306	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.545455
19	35770622	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.166667
19	35770623	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.272727
19	35770631	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.25
1	35813664	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
1	35813674	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35813888	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.272727
7	35814854	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.0952381
7	35814907	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.157895
1	35819327	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35819550	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
1	35819551	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
17	35827215	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.666667
17	35827221	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.266667
17	35827490	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.2
17	35827518	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.176471
17	35827529	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.117647
17	35827586	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.125
17	35827662	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.0645161
1	35829899	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	35829994	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.266667
1	35830070	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.153846
1	35830088	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.142857
1	35831239	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.272727
1	35833266	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.181818
7	35888548	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
7	35888564	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.105263
7	35888618	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.428571
7	35888634	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.307692
7	35888664	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.2
7	35888673	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.272727
7	35888699	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.176471
7	35888709	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.2
7	35888713	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.190476
7	35888740	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.25
7	35888752	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.235294
1	35986797	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.2
18	36003922	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.181818
18	36003937	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.181818
18	36019379	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	1
18	36019380	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	1
18	36019402	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.307692
18	36019783	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.727273
18	36019788	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.363636
9	36450735	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.333333
9	36450752	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	36451343	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.272727
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0277778
1	36476768	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.03125
1	36476825	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.04
1	36476828	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0350877
1	36476878	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0847458
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.08
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.135135
1	36476943	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0632911
9	36480755	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.1
9	36480831	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.111111
17	36558185	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.1875
17	36559242	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36562695	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36562711	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36562742	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.285714
17	36562749	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.307692
17	36562750	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36578348	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.3
20	36578362	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.363636
20	36583551	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.111111
20	36583832	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36583947	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.105263
20	36584024	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.133333
20	36585124	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.181818
19	36804483	A->G	+	ENSG00000267254	AC020928.1	antisense	Intergenic	.	.	Alu	0.2
19	36828712	A->G	+	ENSG00000197863	ZNF790	protein_coding	Intergenic	.	.	Alu	0.2
20	37034079	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.3
7	37080500	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.133333
7	37080576	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.230769
7	37080671	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.3
3	37098453	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	37098455	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.25
3	37098456	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.25
9	37164347	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.3
9	37164354	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.181818
9	37164410	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.181818
9	37164635	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.714286
9	37164643	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.466667
7	37171676	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.125
7	37200147	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.142857
7	37200206	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.363636
7	37200318	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.25
7	37200356	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.461538
5	37215899	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.4
5	37215960	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.4
5	37215970	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.272727
5	37215996	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.3
5	37216040	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.2
5	37216055	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.769231
5	37216056	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.166667
5	37216109	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.133333
5	37216116	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.466667
5	37216281	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.230769
5	37216437	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.909091
5	37216466	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.727273
5	37216467	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.363636
5	37216492	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.133333
3	37260344	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.105263
3	37260358	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.111111
3	37262625	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.3
3	37265782	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.416667
3	37265783	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.416667
3	37265890	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37265906	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.916667
3	37265920	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	37273855	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	37273993	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.130435
3	37274002	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.08
3	37274003	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.24
21	37372327	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.107143
21	37410556	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.142857
21	37410941	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.352941
21	37411102	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.111111
21	37411233	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.296296
21	37411236	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.153846
21	37411258	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0869565
21	37426656	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.666667
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.857143
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.75
21	37427135	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.235294
21	37427241	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.227273
21	37427245	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.807692
21	37427386	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0588235
21	37427398	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0882353
4	37618942	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0689655
4	37619017	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.230769
4	37619102	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.153846
6	37833679	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.235294
6	37870178	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.545455
6	37870188	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.133333
6	37870234	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.133333
6	37870520	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	1
6	37870549	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	37870753	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.3
6	37870797	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
10	38022402	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.3
10	38022492	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.416667
10	38022495	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.230769
10	38022550	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.222222
8	38239105	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.6875
8	38239118	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.173913
8	38239140	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.1
8	38239228	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38239253	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.103448
8	38239349	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.111111
8	38239430	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.230769
8	38239438	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.4
8	38239500	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.12
8	38239524	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.0833333
8	38239540	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.272727
8	38239544	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.368421
8	38239566	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.666667
8	38239984	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.2
8	38239985	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38239997	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.153846
20	38817362	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.153846
20	38817372	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.222222
20	38817480	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.111111
20	38817950	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.210526
20	38818026	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.142857
19	38844946	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.166667
20	38851977	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
2	39042608	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	1
1	39044289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	39046643	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.142857
3	39058996	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.227273
3	39059025	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.1
2	39097633	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	39097643	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
2	39097655	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.133333
2	39097701	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.363636
2	39097702	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39111764	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.130435
2	39111797	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.235294
2	39111825	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39111826	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.111111
2	39111868	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
2	39111949	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39112927	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.230769
2	39113329	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39113397	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.375
2	39113406	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.266667
2	39115553	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.16
2	39115575	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39115646	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.142857
2	39115664	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.111111
2	39115687	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	39115689	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
21	39243566	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.133333
17	39394689	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.416667
19	39491450	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intergenic	.	.	Alu	0.3
19	39491457	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intergenic	.	.	Alu	0.3
4	39725743	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39748524	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.176471
4	39748538	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.409091
4	39768311	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.615385
4	39896187	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.25
4	39896207	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.235294
4	39896269	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.444444
4	39896318	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39896574	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.666667
4	39896595	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39896617	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39971031	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.130435
22	40048430	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.272727
22	40048437	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40056584	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40072785	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40072814	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.133333
22	40073698	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40073990	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.125
22	40074152	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0952381
22	40074153	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.210526
22	40074187	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.117647
22	40074189	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.117647
22	40132701	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40149407	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.4
1	40185121	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.153846
1	40185235	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.1875
1	40185260	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.277778
1	40185270	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.6875
1	40214789	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.24
1	40215650	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.166667
1	40215655	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.1
4	40225212	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.181818
4	40229523	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.363636
4	40229586	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.230769
13	40620871	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.230769
13	40646371	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.3
13	40650870	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	40656909	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40656923	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.3
13	40657038	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.307692
13	40657039	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40657461	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40657510	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40657585	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.105263
1	40707784	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.3
15	40986410	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.4
13	40997325	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40997366	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.176471
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41000455	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.04
13	41012623	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41012723	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	41012724	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	41012757	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.15
13	41012813	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0588235
20	41040685	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0434783
20	41041214	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.185185
20	41041215	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0363636
20	41041216	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.140351
20	41041248	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0434783
20	41041249	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0289855
20	41041262	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0447761
20	41041290	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0333333
20	41041297	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0263158
20	41041299	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.025
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.121212
20	41041339	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.027027
20	41041356	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0967742
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.171429
20	41041375	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0454545
20	41041932	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.157895
20	41041968	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1
20	41042013	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.114286
20	41042048	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.178571
20	41042050	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.285714
20	41042054	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.25
20	41042090	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.238095
20	41042145	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	41052104	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.25
13	41057249	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.111111
1	41234607	A->G	-	ENSG00000010803	SCMH1	protein_coding	Intergenic	.	.	Alu	0.25
19	41266493	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.4
9	41379594	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
22	41534628	A->G	+	ENSG00000100413	POLR3H	protein_coding	Intergenic	.	.	Alu	0.142857
22	41534629	A->G	+	ENSG00000100413	POLR3H	protein_coding	Intergenic	.	.	Alu	0.2
20	41571437	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.0833333
20	41609929	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.2
20	41610036	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.25
20	41610051	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.25
20	41610075	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.214286
20	41610099	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.583333
20	41610122	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.538462
20	41610128	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.0869565
17	42006144	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
17	42006147	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
17	42006196	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.272727
17	42007662	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.230769
3	42018936	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.133333
3	42019018	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.3
3	42019043	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.1
3	42019072	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.571429
3	42022981	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.3
8	42032977	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0869565
6	42034659	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42034683	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.230769
6	42034750	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.166667
1	42301288	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.181818
1	42301333	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.214286
1	42301334	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.230769
1	42301360	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.25
1	42301389	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.25
1	42301394	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.545455
1	42301405	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.142857
1	42301489	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.2
8	42362964	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.2
8	42362965	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.2
17	42363536	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42363541	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.230769
17	42363581	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42368552	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.142857
17	42384267	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.214286
8	42531891	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.173913
8	42531915	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.117647
8	42531924	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.16
8	42531925	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0833333
8	42531930	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.0833333
8	42532024	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.181818
8	42532030	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.181818
8	42532032	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.25
8	42532045	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42532106	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.272727
8	42532122	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.363636
8	42533530	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.6
8	42533533	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.6
8	42533534	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.230769
8	42533581	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.222222
8	42533582	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.117647
8	42533859	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.588235
8	42533878	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.142857
8	42533887	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42534082	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.3
22	42563371	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
1	42699715	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.2
6	42785441	A->G	+	ENSG00000112624	BICRAL	protein_coding	Intergenic	.	.	Alu	0.181818
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.692308
6	42943239	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42943257	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.230769
6	42943258	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.153846
6	42977390	A->G	-	ENSG00000124587	PEX6	protein_coding	Intergenic	.	.	Alu	0.166667
22	43010073	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.166667
8	43060616	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.166667
8	43070092	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.545455
8	43070093	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.181818
8	43070098	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.3
5	43076740	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43076789	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43128401	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0833333
5	43128402	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0909091
5	43128472	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43128775	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.363636
5	43128791	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.125
5	43128883	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.133333
5	43129038	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43129051	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129074	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.416667
5	43129136	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129188	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43129198	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43129340	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.117647
5	43129346	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.1875
5	43129706	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.230769
5	43130251	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43153548	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.357143
5	43153553	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43153586	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.615385
5	43153587	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.25
2	43171641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
2	43171644	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
2	43171708	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
2	43171709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
2	43171739	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
20	43467000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
20	43467306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
11	43473763	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.272727
11	43473764	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.166667
6	43616442	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.272727
6	43616468	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.230769
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.25
15	43760270	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.533333
15	43760284	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.133333
15	43760346	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.4
2	44198290	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.307692
2	44199075	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.333333
2	44199111	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.105263
2	44199137	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.238095
2	44199138	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.157895
2	44222970	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.166667
2	44222972	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.333333
2	44222976	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44223546	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.133333
2	44223554	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.4375
2	44223631	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.333333
2	44223632	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.636364
2	44223673	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0869565
2	44223695	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.347826
2	44223737	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.307692
2	44223766	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.466667
17	44445737	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
1	44451124	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44494036	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.416667
20	44516527	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.583333
20	44516528	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.333333
15	44522095	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.166667
15	44522151	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.1875
15	44522167	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.5
15	44522286	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.583333
15	44522308	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.166667
1	44527883	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.9
15	44601772	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.166667
15	44601801	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.571429
15	44601809	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.272727
1	44627100	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.107143
1	44627127	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.466667
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.09375
7	44832731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0571429
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.277778
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	1
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.421053
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.15
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.266667
7	44833090	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.178571
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.666667
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0526316
7	44833145	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0714286
7	44833222	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0540541
7	44833223	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0526316
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44833264	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	1
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1875
7	44833329	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.529412
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.625
7	44833344	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.875
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.736842
7	44833402	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.105263
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.45
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.136364
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.333333
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44833578	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.238095
7	44833623	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.111111
7	44834907	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0857143
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.275862
7	44836027	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
17	44867416	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.2
17	44867468	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.176471
17	44867469	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.117647
17	44867470	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.2
17	44867508	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.6
X	44883952	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44883955	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44884016	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44884054	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44884062	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.153846
X	44893107	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.307692
X	44893109	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	44893116	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.333333
X	44893138	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.153846
19	45006304	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45006334	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45006385	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.214286
19	45006390	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45006759	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45012785	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45065259	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.2
14	45208454	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.181818
14	45208604	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.3125
14	45208605	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.545455
17	45218235	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.272727
17	45505641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
17	45505642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
17	45506007	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9
17	45506660	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	45506684	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
17	45506728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
1	45648056	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45653283	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.157895
1	45653316	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.391304
1	45653331	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.266667
1	45653337	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.142857
1	45653587	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.526316
1	45653606	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45653917	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.190476
1	45653918	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.25
1	45653954	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.428571
1	45656777	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45656781	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45656782	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.333333
1	45671330	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
12	45899095	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45954654	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0789474
12	45954662	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.128205
12	45957923	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.181818
17	46148641	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.176471
17	46148672	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.384615
17	46148719	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.1875
17	46148723	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.529412
17	46158448	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.166667
17	46158460	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.3
17	46158478	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.166667
17	46263003	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	46263042	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	46263066	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	46263614	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	46263639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	46263640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	46263932	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	46279761	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.1
17	46279767	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.0952381
17	46280155	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.181818
17	46280478	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.2
17	46280482	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.3
17	46280649	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.923077
17	46280676	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.2
17	46282241	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.153846
17	46288868	A->G	-	ENSG00000228696	ARL17B	protein_coding	Intergenic	.	.	Alu	0.166667
2	46632227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
16	46655741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	46708420	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.2
19	46708533	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.428571
19	46708606	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.2
2	46733498	A->G	+	ENSG00000171150	SOCS5	protein_coding	Intergenic	.	.	Alu	0.3
10	46813985	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	47169129	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.214286
20	47288858	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.272727
11	47480198	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47480847	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1875
11	47480924	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.315789
11	47480957	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47481243	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
11	47481265	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.238095
11	47481266	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47481292	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.08
11	47481362	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.352941
11	47481411	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
X	47484854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	47488786	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	47488813	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
20	47510281	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.214286
20	47510286	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.142857
20	47510312	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.307692
20	47510313	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.5
20	47510354	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.25
20	47512404	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.272727
20	47512439	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.142857
20	47513038	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
11	47538006	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47538044	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47542560	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.454545
11	47542595	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47542630	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47542635	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47542749	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.133333
11	47542770	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.307692
11	47542771	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.230769
11	47542779	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
3	47604823	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47616198	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	47616821	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	47708279	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.3
3	47722435	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	47728289	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.333333
3	47728290	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.333333
3	47728291	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.133333
3	47728325	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.117647
3	47728787	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.636364
11	47765942	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.3
3	47780268	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.166667
2	47793505	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.166667
2	47793514	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.181818
2	47793526	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.4
11	47825368	A->G	-	ENSG00000030066	NUP160	protein_coding	Intergenic	.	.	Alu	0.181818
2	47874807	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
2	47874808	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47874810	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47878485	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0869565
2	47878489	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47878539	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.333333
2	47878576	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.157895
2	47878584	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47878629	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.173913
2	47878634	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47878635	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47878641	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.368421
2	47878651	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.294118
2	47878715	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.157895
2	47878721	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.214286
2	47878732	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.352941
2	47878733	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.235294
2	47878734	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.375
2	47878798	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47878815	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.4
2	47878824	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.157895
2	47878832	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.285714
2	47878833	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47878838	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.130435
2	47878857	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0645161
2	47878867	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.09375
2	47878879	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47878896	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.28125
2	47878919	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.4375
2	47878927	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.121212
10	48033987	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
4	48141772	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.363636
4	48141785	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.9
4	48141878	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.266667
4	48141886	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.642857
4	48141900	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.6
10	48356584	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.4
10	48356586	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.384615
10	48356686	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.1
10	48356695	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.25
10	48356706	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.0909091
10	48356722	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.285714
19	48458590	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.266667
19	48458591	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.214286
19	48458593	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.2
19	48458630	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.166667
12	48664026	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	48664052	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.130435
12	48664787	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.105263
3	48697241	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.3
3	48697423	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48697426	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48697431	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.111111
3	48697454	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.097561
3	48697464	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0540541
3	48697817	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48698700	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48698706	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.272727
17	48866933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	48867268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	48867409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	48867453	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48867762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48867938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	48936505	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.166667
13	48990641	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.181818
13	48990682	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.266667
13	48990687	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.153846
13	48991609	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.181818
15	49034889	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.125
15	49034957	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.272727
3	49064359	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.2
3	49064382	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49069699	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.3
20	49071563	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.2
20	49071874	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.2
20	49072018	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.181818
20	49072040	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.214286
3	49089107	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49089191	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49089230	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
20	49163488	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.153846
20	49163498	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.214286
20	49163499	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.285714
20	49163522	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.166667
20	49163700	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49407330	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
3	49407331	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0833333
3	49407374	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.097561
3	49407398	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0645161
3	49407428	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.08
13	49788662	A->G	-	ENSG00000102753	KPNA3	protein_coding	Intergenic	.	.	Alu	0.153846
14	49839143	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.166667
14	49839215	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.1
14	49839286	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.142857
14	49839318	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.166667
14	49839354	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.153846
14	49839367	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.25
22	49869044	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.2
22	49869073	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.2
10	49963795	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.153846
10	49966655	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.133333
10	49966678	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.133333
10	49966689	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.333333
10	49966691	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.5
10	49966705	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.4
13	50008963	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.133333
3	50112216	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0833333
3	50112221	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.136364
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.318182
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.466667
13	50118803	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.181818
13	50118866	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.08
12	50153506	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.166667
12	50153512	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.333333
12	50161661	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.928571
12	50161691	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.642857
12	50161694	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.266667
12	50161967	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.3
12	50162007	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.4
12	50164340	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.4
14	50197749	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.222222
14	50197781	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0833333
14	50197791	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.103448
14	50197821	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.205882
14	50197826	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.133333
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.333333
14	50197856	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0689655
14	50197884	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0952381
14	50197887	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.130435
14	50197899	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.259259
14	50197962	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.125
15	50332068	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.111111
15	50332076	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.111111
15	50332148	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.153846
15	50334646	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.444444
3	50335518	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0555556
3	50335545	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	50335662	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.125
3	50335873	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.315789
7	50339633	A->G	+	ENSG00000185811	IKZF1	protein_coding	Intergenic	.	.	Alu	0.2
15	50346938	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	50347069	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0769231
20	50588961	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	0.25
17	50728030	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50730138	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.307692
17	50730365	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.142857
17	50730368	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.25
17	50730370	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.125
17	50730400	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.357143
17	50730401	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.5
17	50730450	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.294118
17	50730464	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.428571
16	50748449	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.2
14	50803964	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.3
14	50803965	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.4
14	50811312	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.375
14	50811313	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.125
20	50922663	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.111111
20	50922678	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.133333
17	50998095	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51083332	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51216070	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.25
17	51269122	A->G	+	ENSG00000011260	UTP18	protein_coding	Intergenic	.	.	Alu	0.2
17	51269125	A->G	+	ENSG00000011260	UTP18	protein_coding	Intergenic	.	.	Alu	0.3
17	51269127	A->G	+	ENSG00000011260	UTP18	protein_coding	Intergenic	.	.	Alu	0.3
1	51621300	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.166667
1	51633670	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.5
1	51643959	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.272727
15	51853724	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.2
8	51896178	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.1
15	51916947	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.142857
15	51934888	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.454545
15	51943657	A->G	+	ENSG00000166477	LEO1	protein_coding	Intergenic	.	.	Alu	0.166667
15	51974741	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.3
15	51974779	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.454545
19	52193857	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.363636
19	52193910	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.692308
19	52193947	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.3
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.6
3	52414872	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.153846
3	52414903	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.4
3	52414916	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.181818
3	52414951	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.263158
3	52414953	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.526316
3	52414959	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.15
3	52415245	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.625
3	52415252	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.2
3	52415277	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.125
3	52415296	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.105263
3	52415297	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.3
3	52415314	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.2
1	52440330	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.0689655
1	52440350	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.16
1	52471155	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52531976	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.3
15	52562922	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.142857
15	52563004	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.15
15	52563013	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.1875
15	52563058	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.142857
19	52639626	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.181818
19	52639636	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.6
19	52639660	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52647541	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52647546	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
8	52698802	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0540541
8	52698828	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	52698838	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	52698854	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	1
8	52698862	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	52698885	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.378378
8	52698909	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.15
8	52698918	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.458333
8	52701215	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52701237	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1
8	52701260	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	52701304	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52706855	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.230769
8	52706856	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.307692
8	52706857	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.384615
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.933333
8	52706889	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.416667
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.666667
14	52714633	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.583333
14	52714716	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.117647
14	52714723	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.133333
14	52714772	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.133333
19	52924803	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.133333
19	52925327	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52926605	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.363636
19	52926606	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52926988	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.153846
19	52926991	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.2
19	52927035	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.142857
19	52927057	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.272727
19	52941014	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
19	52941024	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.25
19	52941200	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.363636
6	53320057	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.105263
6	53320079	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.125
6	53320112	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0833333
6	53320168	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53320179	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.238095
6	53320195	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.238095
6	53320202	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.4
6	53320205	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.352941
6	53320271	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.454545
6	53320474	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.692308
6	53320503	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.470588
6	53320504	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.2
6	53320507	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.125
6	53330636	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.181818
6	53330660	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.133333
3	53333265	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.125
3	53333278	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.266667
3	53333279	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.375
3	53335311	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
3	53335344	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
3	53335345	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.214286
3	53336254	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.153846
4	53419540	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.125
4	53419541	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.3125
4	53419558	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.352941
4	53419605	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.384615
4	53419606	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
4	53420019	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.105263
4	53420030	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
4	53420036	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.111111
4	53420048	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.117647
5	53605759	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.454545
5	53605760	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.363636
5	53605893	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.5
5	53605899	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.4
2	53790163	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.461538
8	53990314	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.307692
8	53990436	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.3
8	53992450	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.266667
8	53993038	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.428571
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.615385
1	54049807	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
1	54050395	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.0952381
1	54051128	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.181818
19	54177434	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.4
19	54177687	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.153846
19	54177715	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.153846
19	54177841	A->G	-	ENSG00000125505	MBOAT7	protein_coding	Intergenic	.	.	Alu	0.157895
5	54299783	A->G	-	ENSG00000185305	ARL15	protein_coding	Intergenic	.	.	Alu	0.2
X	54562120	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54562211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54562226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54562243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54562307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54562308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.52
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54562699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
X	54562734	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54562799	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54564914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54564971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54564972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54564978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	55059377	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.16
14	55059383	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0882353
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.4
14	55278870	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55278877	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.357143
14	55278901	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55278948	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.230769
14	55278949	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.933333
14	55279112	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.192308
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.407407
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.272727
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.647059
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.285714
2	55384786	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.166667
2	55407370	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.307692
2	55407386	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.5
2	55407388	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.181818
7	55408624	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.3
4	55412163	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.2
4	55412218	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.1875
4	55412229	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.214286
4	55412235	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.142857
4	55412274	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.583333
5	55433053	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.1
5	55433054	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.833333
5	55433084	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	55433099	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	55433124	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	55433137	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.727273
5	55433192	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	55433208	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.333333
5	55433220	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	55433245	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.315789
5	55433246	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	55433291	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.1875
5	55433626	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.363636
5	55433704	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	1
5	55433749	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.1875
5	55433758	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.454545
5	55433759	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.5
5	55433771	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	55433787	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	55434009	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.461538
5	55434081	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.2
5	55434086	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.545455
18	55549108	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.416667
2	55573991	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.285714
2	55574045	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.0555556
2	55574064	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.125
2	55574092	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.115385
12	55759496	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55890048	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55890063	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0625
8	55890218	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55890232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55890237	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
8	55891191	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.461538
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.266667
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.37037
8	55896190	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55896211	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55896225	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55896249	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55896818	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55896819	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55896843	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55896857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55896881	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55896901	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55897014	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55906518	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55906537	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.6
8	55906667	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.210526
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55917016	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55917279	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55917311	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.428571
4	55960986	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.125
4	55961045	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.153846
4	55961503	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.176471
4	55961644	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.2
4	55962307	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.8
4	55962347	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.411765
4	55962361	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.166667
4	55962362	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.2
4	55962370	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.25
4	55962374	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.181818
4	56056648	A->G	+	ENSG00000109265	KIAA1211	protein_coding	Intergenic	.	.	Alu	0.615385
4	56056815	A->G	+	ENSG00000109265	KIAA1211	protein_coding	Intergenic	.	.	Alu	0.285714
4	56056817	A->G	+	ENSG00000109265	KIAA1211	protein_coding	Intergenic	.	.	Alu	0.333333
4	56056818	A->G	+	ENSG00000109265	KIAA1211	protein_coding	Intergenic	.	.	Alu	0.4
4	56056824	A->G	+	ENSG00000109265	KIAA1211	protein_coding	Intergenic	.	.	Alu	0.266667
4	56056831	A->G	+	ENSG00000109265	KIAA1211	protein_coding	Intergenic	.	.	Alu	0.307692
8	56068914	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.764706
8	56068968	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.117647
8	56068973	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.266667
8	56069001	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.111111
8	56069030	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.333333
8	56069384	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.25
8	56069395	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.214286
8	56069413	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.583333
8	56069436	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.272727
7	56095566	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	56096908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	56096943	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	56098064	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
7	56098102	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
7	56098118	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
7	56098720	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
7	56098721	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
7	56098817	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	56099291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
12	56312018	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.3
12	56312073	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	56312501	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.125
12	56313682	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.2
12	56313731	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.230769
12	56313745	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.8
12	56314309	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.176471
18	56611761	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.111111
18	56611790	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.117647
18	56611799	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.15
18	56611818	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.277778
18	56611843	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.285714
18	56611973	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.230769
18	56611987	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.25
18	56612113	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1875
18	56612123	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.166667
18	56612139	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1875
12	56730505	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.166667
12	56730532	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.538462
12	56730563	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.157895
12	56730573	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.2
12	56730574	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.08
12	56731292	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.35
12	56731396	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.153846
12	56731397	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.153846
12	56731436	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.142857
12	56731437	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.142857
12	56731460	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.384615
12	56731462	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4375
12	56731463	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.533333
4	56939226	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.230769
15	56971294	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.125
15	56971382	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.181818
15	57098064	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.133333
15	57098065	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.125
15	57098070	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.111111
15	57098110	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.153846
15	57098135	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.166667
4	57105967	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.181818
17	57304095	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.25
17	57304103	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.230769
17	57304104	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.615385
17	57304633	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.153846
12	57322133	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.133333
17	57345618	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	57345690	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.133333
17	57409753	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.1
17	57409754	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.190476
17	57409845	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.176471
17	57409861	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.357143
17	57409968	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.416667
17	57450592	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.6
17	57450610	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.230769
17	57450626	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.230769
3	57569590	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
3	57569711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	57579041	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.1875
3	57579042	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.1875
3	57579077	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3
17	57647322	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.3
17	57647338	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.333333
17	57647393	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	1
17	57647394	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.944444
17	57647414	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.25
17	57648108	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
3	57677574	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.272727
11	57734948	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.181818
18	57738360	A->G	+	ENSG00000081923	ATP8B1	protein_coding	Intergenic	.	.	Alu	0.454545
19	57774039	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.166667
19	57774071	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.3
19	57774086	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.2
3	57775566	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.153846
3	57775585	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.142857
3	57775603	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.25
3	57775609	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.181818
3	57775650	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.181818
19	57812121	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.545455
3	57855936	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.181818
19	57866992	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.181818
14	58261320	A->G	-	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.25
19	58265949	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.181818
19	58265950	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.272727
19	58265958	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.3
19	58267123	A->G	+	ENSG00000268201	AC020915.2	sense_intronic	Intergenic	.	.	Alu	0.3
19	58269744	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.363636
19	58269745	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.363636
14	58277309	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.3
3	58310664	A->G	+	ENSG00000163684	RPP14	protein_coding	Intergenic	.	.	Alu	0.2
19	58313425	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.3
20	58325056	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.181818
17	58340507	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.454545
17	58340546	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.142857
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.642857
17	58340569	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.3125
17	58340573	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.352941
17	58340588	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.388889
17	58340761	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.4
17	58340793	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.157895
17	58340889	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58340917	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58340944	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.111111
17	58340952	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.117647
17	58340971	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58341474	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58341480	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341497	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.272727
17	58341681	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.642857
17	58341722	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	58341727	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.3
17	58341780	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	58341783	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58341784	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.25
17	58341789	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.166667
17	58341815	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.636364
17	58341825	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58341861	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	59203244	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.166667
17	59203256	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.333333
17	59203342	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.5
17	59203366	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.230769
17	59203390	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.5
17	59204943	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.153846
17	59204948	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	59275081	A->G	+	ENSG00000153982	GDPD1	protein_coding	Intergenic	.	.	Alu	0.272727
17	59275089	A->G	+	ENSG00000153982	GDPD1	protein_coding	Intergenic	.	.	Alu	0.454545
15	59690761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
14	60256327	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.117647
14	60256339	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.133333
14	60272589	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0833333
8	60518395	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0833333
17	60519664	A->G	-	ENSG00000062725	APPBP2	protein_coding	Intergenic	.	.	Alu	0.2
8	60586826	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
2	61269293	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.25
2	61269321	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.166667
2	61269369	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.4
11	61319620	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.2
2	61359870	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.142857
2	61359891	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.125
2	61359896	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
5	61378925	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.181818
5	61378938	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.5
5	61378952	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61378965	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.181818
5	61378970	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.181818
17	61998724	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.214286
17	61998744	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	61998781	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.176471
17	61998817	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	61998885	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.142857
5	62323096	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.4
5	62323402	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.125
12	62330333	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.16129
12	62330360	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.103448
12	62330665	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0434783
12	62330692	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0930233
12	62330739	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.04
12	62330783	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0714286
12	62330787	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0740741
12	62330851	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0909091
12	62330859	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0666667
12	62332018	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.363636
12	62332043	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.2
12	62332053	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.181818
17	62474482	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62475549	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62476461	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62476471	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.363636
17	62518457	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.545455
17	62518490	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.157895
18	62532849	A->G	+	ENSG00000141664	ZCCHC2	protein_coding	Intergenic	.	.	Alu	0.4
18	62532900	A->G	+	ENSG00000141664	ZCCHC2	protein_coding	Intergenic	.	.	Alu	0.3
18	62727427	A->G	+	ENSG00000081913	PHLPP1	protein_coding	Intergenic	.	.	Alu	0.181818
11	62823205	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62823208	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.133333
11	62823272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.272727
11	62823273	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.285714
11	62823375	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.214286
8	63196307	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.454545
10	63510132	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.363636
10	63510142	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.545455
15	63547475	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63547636	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63547655	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.333333
15	63547923	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.176471
15	63548000	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63548026	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	63548031	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.761905
15	63548230	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.4
15	63578639	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.583333
12	63588882	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.307692
12	63588892	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.181818
12	63588918	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.4
17	63643032	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.6
15	63739704	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
3	63866368	A->G	+	ENSG00000285258	ATXN7	protein_coding	Intergenic	.	.	Alu	0.181818
15	64098432	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.153846
15	64098461	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.15
15	64098466	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64098542	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64098605	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	64098610	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	64098611	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64098622	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.1
15	64098631	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64099756	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.75
15	64100324	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.210526
15	64100352	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64100423	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.125
15	64100453	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.5
15	64100479	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.3125
15	64100480	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.375
15	64100502	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.125
15	64100873	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64100904	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.25
15	64100905	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64108914	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.153846
15	64108963	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64109115	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64109121	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.357143
15	64109187	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.454545
15	64109275	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64359592	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	64359610	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.15
15	64359611	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.190476
15	64359615	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.136364
15	64359619	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.136364
15	64359627	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64359635	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64359820	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.454545
15	64359823	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64359827	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64359856	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.3
15	64361418	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64361447	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64361468	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
12	64460574	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.1875
12	64460657	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.2
12	64460658	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.2
12	64463449	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.2
5	64758037	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.230769
17	64932946	A->G	+	ENSG00000264057	AC103810.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
1	64951913	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.133333
14	65052024	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.2
14	65052068	A->G	-	ENSG00000125954	CHURC1-FNTB	protein_coding	Intergenic	.	.	Alu	0.166667
2	65127866	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.4
15	65541976	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.166667
15	65542376	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.217391
15	65542390	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.173913
15	65542393	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	65542397	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.708333
15	65542403	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	65728551	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
8	65729687	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.181818
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	65897394	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.153846
11	65898205	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.4
11	65974572	A->G	+	ENSG00000175467	SART1	protein_coding	Intergenic	.	.	Alu	0.142857
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.1
7	65981128	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.1
7	65981143	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.0909091
7	65981155	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.153846
7	65981343	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.157895
5	66149332	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.2
12	66202579	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	66635027	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.774194
11	66635105	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.642857
11	66635117	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0512821
11	66635154	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.206897
11	66635167	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66635170	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.15
11	66635248	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.285714
11	66635249	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.47619
11	66635261	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.692308
11	66635263	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.12
11	66635353	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.6
11	66635360	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.615385
11	66635414	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.342857
11	66635436	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66635439	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0606061
11	66635440	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0606061
11	66635467	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3125
11	66635480	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66635481	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0857143
11	66635490	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66635494	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.108108
11	66635521	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66635569	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66635644	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0967742
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.333333
11	66635659	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.102564
11	66635692	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0555556
11	66635700	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66635720	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.121212
11	66635772	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1875
11	66635780	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0689655
11	66635781	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0625
11	66636110	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66636139	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66636149	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.285714
11	66636193	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66672151	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.3
11	66672152	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.4
11	66672230	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
11	66672355	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.2
8	66726729	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.153846
8	66726740	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.2
7	66742012	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.25
7	66742030	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66742036	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.230769
7	66742740	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66742741	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3125
7	66743118	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66743146	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.285714
7	66743147	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.214286
7	66743148	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.214286
7	66743196	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.833333
7	66743386	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66743425	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
1	66936745	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.142857
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.333333
1	66936751	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936789	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.454545
1	66936792	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.3
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.210526
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.222222
1	66937353	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.266667
1	66937355	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.133333
1	66937464	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.375
1	66937465	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1875
1	66937487	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.133333
1	66937505	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.333333
1	66937511	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
14	67011499	A->G	+	ENSG00000171723	GPHN	protein_coding	Intergenic	.	.	Alu	0.2
11	67126313	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67155721	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.166667
11	67155746	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67187921	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67187931	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67187933	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.5
11	67187938	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.384615
11	67187978	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.214286
11	67187982	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.166667
11	67188688	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
17	67195989	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	1
17	67196045	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.133333
7	67304128	A->G	-	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	67312533	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
14	67315401	A->G	-	ENSG00000072415	MPP5	protein_coding	Intergenic	.	.	Alu	0.2
14	67315415	A->G	-	ENSG00000072415	MPP5	protein_coding	Intergenic	.	.	Alu	0.3
8	67327455	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.166667
8	67327456	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.166667
17	67354755	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.105263
17	67354862	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.105263
17	67354878	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67354943	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.47619
17	67354946	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.352941
17	67355178	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.171429
17	67355229	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.193548
17	67355230	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.21875
17	67355240	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.148148
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.482759
17	67355261	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0645161
17	67355265	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0714286
17	67355272	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0869565
1	67417613	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.25
4	67527639	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.133333
4	67527641	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.133333
4	67527696	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.117647
16	67566317	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.4
16	67566318	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.266667
16	67566346	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.153846
16	67566348	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.4
16	67566351	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67566422	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.133333
16	67566460	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.153846
16	67566681	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.103448
16	67566721	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.0689655
16	67566755	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.454545
16	67566786	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.833333
16	67566833	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67566945	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.1875
16	67567076	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67567080	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67591137	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.153846
17	68120653	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	68120663	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
15	68138039	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
16	68201829	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.454545
16	68201837	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.5
2	68205328	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.142857
2	68205451	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	68245114	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.1875
2	68245240	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.428571
2	68246142	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.4
2	68246171	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.266667
2	68246186	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.25
2	68246199	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.285714
2	68246212	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.454545
2	68246213	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.363636
2	68246239	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.380952
2	68246243	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	68246295	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.25
2	68246345	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.346154
2	68246346	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.230769
11	68463249	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.111111
11	68493565	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.166667
11	68493988	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.128205
10	68497754	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.363636
10	68497888	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.6
11	68533650	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.272727
12	68613099	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0645161
12	68613100	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0645161
12	68613150	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0740741
12	68613213	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68623874	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68637365	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.24
12	68637401	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.307692
12	68637433	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.235294
12	68637438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68637439	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68637442	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68637450	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.25
12	68637454	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.238095
12	68637466	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.304348
12	68637476	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68637477	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.148148
12	68637512	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68637517	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.222222
12	68637518	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.230769
12	68637587	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.2
10	68760652	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.363636
10	68760671	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	69076695	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.272727
3	69076699	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.2
10	69151367	A->G	+	ENSG00000122958	VPS26A	protein_coding	Intergenic	.	.	Alu	0.2
12	69244997	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.176471
12	69250764	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.115385
12	69250881	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0625
16	69381767	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.181818
16	69571184	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69571193	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.107143
16	69571253	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0909091
16	69598965	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69609712	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.125
X	70137931	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.454545
X	70138056	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.3
X	70138295	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.133333
X	70138456	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	70145479	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	1
2	70217562	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.133333
2	70217592	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.111111
2	70217593	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.111111
2	70219555	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.142857
2	70219852	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
12	70254861	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.08
12	70283447	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.4
10	70414981	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	Intergenic	.	.	Alu	0.125
7	70439290	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.3
7	70439293	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.4
14	70924177	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.153846
X	71057789	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.25
3	71268231	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71268255	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.133333
3	71277163	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.272727
3	71343701	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71343771	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71343779	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.25
2	71386219	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.111111
X	71549643	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
3	71558606	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	71558641	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.307692
3	71558659	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.384615
3	71558688	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71558689	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	71558769	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.416667
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71661748	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71774369	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0625
12	71774381	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.117647
12	71774398	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0740741
12	71774415	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0909091
12	71775803	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.4
12	71850463	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.105263
12	71850487	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0689655
12	71850512	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0666667
12	71850525	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0869565
12	71850530	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.263158
12	71850546	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.5
12	71850552	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.461538
12	71850554	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.25
12	71850734	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0909091
12	71850777	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.0588235
12	71850836	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.2
12	71850837	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.157895
12	71850864	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.473684
12	71850866	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.6
12	71850872	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.263158
12	71850873	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.2
12	71850888	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.277778
12	71850893	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.117647
16	71898531	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.130435
16	71898890	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.125
3	72416418	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.105263
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.2
3	72416701	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.238095
3	72416710	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.166667
15	72505830	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.151515
15	72505853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0784314
15	72505862	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0350877
15	72505865	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0350877
15	72505875	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0925926
15	72505916	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.12
15	72505936	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.185185
15	72505995	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72505999	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.333333
15	72506161	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	72506170	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	72506229	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.125
15	72506243	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.552632
15	72506292	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72510557	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72575000	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72575018	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.222222
15	72575023	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.111111
15	72575032	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72575944	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72576250	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72763199	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.307692
5	72868311	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.173913
7	72994477	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.444444
7	72995649	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	72995656	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
7	72995872	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.923077
7	72995873	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.538462
11	73058693	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.153846
11	73097147	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.142857
10	73116647	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.2
10	73116679	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.4375
10	73117024	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.142857
10	73117060	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.133333
10	73117061	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.133333
10	73117111	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.4
14	73139096	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73139121	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.2
4	73196206	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.3
4	73226491	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.15
4	73226598	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.117647
4	73226613	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.125
4	73226665	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.142857
4	73240855	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
7	73461963	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.384615
10	73480687	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.285714
10	73480695	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.153846
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
6	73514607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	73514919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	73684379	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.166667
7	73684761	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.4
7	73684762	A->G	+	ENSG00000071462	BUD23	protein_coding	Intergenic	.	.	Alu	0.2
11	73892202	A->G	+	ENSG00000175575	PAAF1	protein_coding	Intergenic	.	.	Alu	0.2
8	73967605	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.181818
8	73967606	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.181818
10	74011011	A->G	+	ENSG00000225761	AL596247.1	sense_intronic	Intergenic	.	.	Alu	0.2
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.5
7	74178423	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.2
10	74185948	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.5
10	74204811	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.272727
10	74204929	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	74205556	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.166667
X	74265349	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74265462	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74265468	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74265484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.4
X	74265497	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.285714
X	74265501	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.285714
X	74265502	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.285714
X	74265521	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0833333
X	74265527	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.136364
X	74265537	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74265939	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74265942	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.136364
X	74265964	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0909091
X	74265972	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.15
X	74265998	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.384615
X	74266004	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.35
X	74266034	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.206897
X	74266046	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0714286
X	74266054	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74266090	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.368421
X	74266093	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.578947
X	74266097	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74266120	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.285714
X	74266131	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74266144	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.08
X	74266145	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.208333
X	74266150	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0833333
X	74266153	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.24
X	74266169	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.190476
X	74266173	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0952381
X	74266294	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.352941
X	74266317	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3125
X	74266318	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.307692
X	74266333	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74266339	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.235294
X	74266368	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74266394	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74266407	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.235294
X	74266408	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.411765
X	74266411	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.888889
X	74266444	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.142857
X	74266463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3125
X	74266476	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.176471
X	74266484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.294118
X	74266507	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1875
10	74845072	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.166667
10	74845108	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.125
7	74879175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	74879884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
7	74880354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
7	74880402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	74880419	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
7	74880420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
7	74880525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
7	74880572	A->G	-	.	.	.	Intergenic	.	.	Alu	0.833333
7	74881486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
7	74986310	A->G	+	ENSG00000274070	CASTOR2	protein_coding	Intergenic	.	.	Alu	0.454545
16	75050961	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.384615
16	75050964	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.2
16	75051080	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.4
17	75324039	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3
17	75324330	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75324610	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.307692
17	75324615	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.125
17	75324656	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75324952	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75325000	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75325024	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75346322	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.916667
17	75346413	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.190476
17	75346414	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.15
17	75346764	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.384615
17	75355903	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75355904	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.25
17	75355907	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.416667
17	75355914	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
7	75368313	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
7	75369226	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	75369227	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.833333
16	75651536	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	75651568	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.15
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.3
4	75916918	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.2
7	76337637	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.2
7	76337673	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.1875
11	76379062	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.181818
12	76483312	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.133333
12	76483328	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76483399	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.363636
12	76483507	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.3
12	76483737	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
12	76483757	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.333333
12	76483839	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.153846
12	76483863	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.333333
12	76483879	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76483925	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.133333
12	76483947	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.21875
12	76483948	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
12	76483956	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.1
12	76530143	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0487805
14	77529760	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.117647
14	77529761	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.117647
14	77529767	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.111111
1	77747456	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.153846
11	77761898	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	77761899	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.1
11	77761958	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.181818
X	77847749	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.166667
X	77847820	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.181818
9	77870464	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.363636
9	77880449	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.125
9	77975660	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.333333
9	77975704	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	77986584	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.111111
9	77986603	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0769231
9	77986621	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0740741
9	77986622	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0714286
9	77986694	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.1
9	77986706	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.179487
9	77986710	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.0697674
9	77986775	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	77986776	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.136364
X	78132174	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.176471
11	78389511	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78389515	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.416667
11	78396776	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
16	78455522	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.333333
16	78546994	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.153846
4	78793289	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.3
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
15	78898313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.55
15	78898319	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
15	78898323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
15	78898352	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
15	78898378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
15	78898379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
15	78898489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.24
15	78899058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.514286
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108108
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
15	78899321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.236842
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
15	78899416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.186047
15	78899517	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
15	78899605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
5	79659280	A->G	+	ENSG00000164329	TENT2	protein_coding	Intergenic	.	.	Alu	0.166667
4	79933873	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.769231
15	80066510	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80066688	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80066701	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0952381
15	80066737	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80066738	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.692308
15	80066739	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80066741	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80066750	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80066777	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.363636
15	80066812	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80066860	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4
15	80092386	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.666667
10	80484418	A->G	+	ENSG00000108219	TSPAN14	protein_coding	Intergenic	.	.	Alu	0.2
16	81030731	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.846154
5	81463443	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0571429
5	81463455	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0519481
5	81463456	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.121951
5	81463482	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.113043
5	81463483	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0884956
5	81463488	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0392157
5	81463495	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0520833
5	81463496	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0204082
5	81463532	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0491803
5	81463543	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.586207
5	81463551	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.030303
5	81463552	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.03
5	81463576	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.666667
5	81463578	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0813953
5	81463591	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.47619
5	81463600	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0576923
5	81463613	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0819672
5	81463617	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	1
5	81463618	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.21875
5	81463637	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0361446
5	81463643	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
5	81463659	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.788235
5	81463866	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.128205
5	81463906	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0512821
5	81463907	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.414634
5	81463925	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.15
5	81463945	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.176471
5	81463946	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.117647
5	81463951	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	81463952	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.285714
5	81463968	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.125
5	81463982	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.047619
5	81463996	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.156863
5	81464001	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.384615
5	81464015	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.467742
5	81464019	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.111111
5	81464020	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0645161
5	81464060	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0857143
5	81464063	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.176471
5	81464064	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.171429
17	81847878	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.214286
17	81856400	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.0769231
17	81856435	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.1
4	82365712	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intergenic	.	.	Alu	0.0412371
4	82365713	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intergenic	.	.	Alu	0.0322581
4	82366834	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intergenic	.	.	Alu	0.0229885
15	83052660	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.133333
15	83052759	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.153846
15	83052763	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.153846
15	83052769	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.230769
15	83052841	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.272727
15	83052882	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.210526
4	83057801	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.111111
4	83057828	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.294118
4	83058297	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.133333
4	83058317	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.333333
4	83058330	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.75
9	85642467	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.181818
2	86756973	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.105263
6	87187543	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87187571	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.416667
6	87187579	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87249978	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.125
6	87250314	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.636364
6	87250344	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.615385
6	87250349	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.636364
6	87250361	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.153846
6	87250364	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.153846
3	87841636	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
3	87841644	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
3	87841645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
3	87841671	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	87841675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	87841744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	87841780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	87841832	A->G	+	.	.	.	Intergenic	.	.	Alu	0.818182
3	87841855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	87842290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	87842297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	87842300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.944444
3	87842302	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
3	87842344	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	87842361	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
3	87842373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	87842405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
3	87842424	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	87842436	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	87842445	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
10	87891585	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.142857
10	87891653	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.166667
10	87891659	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.266667
10	87891739	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.125
4	88013622	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	88016840	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.333333
4	88016886	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.272727
4	88016899	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	88017092	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.2
4	88017095	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	88089020	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.310345
3	88089025	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.382353
4	88602139	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.181818
4	88602282	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.153846
4	88602304	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.2
4	88602514	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.153846
4	88602536	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.357143
4	88602742	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.166667
4	88602748	A->G	+	ENSG00000285385	AC098582.1	protein_coding	Intergenic	.	.	Alu	0.75
2	88608960	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.1
1	88874551	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.214286
1	88874561	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.125
1	88884160	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.2
1	88884192	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.166667
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.227273
15	89874019	A->G	-	ENSG00000157823	AP3S2	protein_coding	Intergenic	.	.	Alu	0.230769
16	89886307	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
16	89886615	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.181818
16	89886619	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.3
16	89886641	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89886683	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.5
16	89886707	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89886790	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.375
16	89886857	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.181818
16	89886858	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.909091
16	89887133	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.692308
15	90082853	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
15	90082856	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
15	90082890	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
15	90082926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	90141292	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.409091
6	90141337	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.2
6	90141460	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0833333
14	90266098	A->G	+	ENSG00000100764	PSMC1	protein_coding	Intergenic	.	.	Alu	0.111111
14	90266134	A->G	+	ENSG00000100764	PSMC1	protein_coding	Intergenic	.	.	Alu	0.1
15	90985697	A->G	-	ENSG00000198901	PRC1	protein_coding	Intergenic	.	.	Alu	0.285714
1	91010359	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0645161
10	91168885	A->G	+	ENSG00000180628	PCGF5	protein_coding	Intergenic	.	.	Alu	0.142857
14	91501837	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.416667
10	92001844	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.363636
7	92091332	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.636364
7	92091333	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.272727
14	92091368	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.181818
7	92091492	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.230769
7	92091527	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.181818
7	92091528	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.166667
14	92091824	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.25
14	92091846	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.6
14	92091991	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.2
7	92287915	A->G	+	ENSG00000001629	ANKIB1	protein_coding	Intergenic	.	.	Alu	0.3
1	92292880	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.166667
1	92292899	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.733333
1	92292912	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.142857
1	92292915	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.153846
1	92292940	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.230769
1	92292947	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.3
1	92292965	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.214286
1	92293000	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.363636
10	92314824	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
10	92314849	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.5
10	92336898	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.2
7	92573246	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.133333
7	92573266	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.153846
10	92651598	A->G	-	ENSG00000138160	KIF11	protein_coding	Intergenic	.	.	Alu	0.2
10	92671103	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
10	92671104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
10	92671109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
10	92671150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	92711653	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.08
7	92711660	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.653846
7	92711675	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.2
7	92711736	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.296296
7	92711737	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0714286
7	92711740	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0740741
7	92711744	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0869565
7	92711764	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.666667
7	92711994	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.705882
7	92711999	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.857143
7	92712014	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.111111
7	92712030	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.333333
7	92712073	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.347826
7	92712076	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.238095
7	92870539	A->G	+	ENSG00000237819	AC002454.1	antisense	Intergenic	.	.	Alu	0.2
15	92889234	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.05
15	92889248	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0731707
15	92889277	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.108108
15	92889281	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.210526
15	92889345	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	92889355	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0857143
15	92889365	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.189189
15	92889408	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.125
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	92889426	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	92889437	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.125
15	92908933	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	92908998	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.08
15	92909039	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	92909040	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.133333
12	93421334	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.166667
11	93720670	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.8
5	93981147	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
15	94393900	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.166667
15	94469606	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.133333
15	94469610	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.266667
15	94469658	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.181818
15	94469707	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.1
12	95053878	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.125
12	95057287	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.181818
12	95057309	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.214286
12	95057312	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.214286
12	95239862	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.153846
12	95285219	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.2
12	95307244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
12	95476245	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	95476252	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.166667
12	95476287	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.272727
12	95476409	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.285714
12	95482655	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.3
12	95482659	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.25
12	95482666	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.25
2	96280412	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.25
2	96280438	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.636364
2	96280642	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.153846
2	96280646	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.153846
2	96280714	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.153846
1	96797955	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.105263
1	96797961	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.1
1	96798026	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	96798206	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	96798219	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.266667
1	96798220	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.3125
1	96798285	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.1875
1	96798286	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.25
1	96798312	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.142857
10	96888112	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
5	96942493	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.333333
8	97665910	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.272727
8	97729059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
8	97729188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
8	97729752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
8	97729765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
8	98043342	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.181818
8	98043350	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.166667
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.538462
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.692308
7	98115710	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.272727
4	98312954	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.454545
7	98903942	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.181818
7	98903944	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.2
7	98903945	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.3
7	98903949	A->G	+	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.2
6	99536106	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
6	99555715	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.272727
6	99556758	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.2
6	99556809	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.176471
6	99556838	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.307692
2	99719001	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.181818
3	99832761	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.833333
3	99832792	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.846154
3	99832795	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.153846
1	100074723	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.142857
12	100135332	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.133333
12	100136976	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.157895
12	100136988	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	100136989	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.272727
12	100137014	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.4
12	100137015	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.1
12	100137086	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.09375
1	100286307	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.3
1	100286333	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.416667
1	100286343	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.153846
14	100302634	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.363636
7	100363022	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.15
7	100363047	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.103448
2	101275053	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0540541
4	101333335	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101702449	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.181818
2	101702462	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.166667
12	101709138	A->G	+	ENSG00000111666	CHPT1	protein_coding	Intergenic	.	.	Alu	0.727273
12	101709140	A->G	+	ENSG00000111666	CHPT1	protein_coding	Intergenic	.	.	Alu	0.181818
12	101709167	A->G	+	ENSG00000111666	CHPT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	101789376	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.153846
10	101789412	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.25
10	101789714	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.5
10	101789717	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.545455
10	101789723	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.846154
10	101789756	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.384615
10	101789757	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.461538
10	101789771	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.230769
10	101789782	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.727273
10	101789848	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101789857	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.111111
10	101789867	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.214286
10	101789917	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.181818
10	101789938	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.6
10	101789940	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.5
10	101790365	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.68
10	101790369	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.269231
10	101790410	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.282051
10	101790437	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.666667
10	101790441	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0454545
10	101790445	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.047619
10	101790465	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0588235
10	101790470	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.171429
10	101790471	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.323529
10	101790480	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.222222
10	101790495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101790496	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.297297
10	101790508	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0967742
10	101790533	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0588235
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101790549	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.357143
10	101790550	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.464286
12	101824582	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101824595	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101827040	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.235294
12	101827093	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.0869565
12	101827101	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.117647
12	101827103	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.214286
12	101827119	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.142857
12	101827929	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
7	101833307	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.15
7	101833347	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.25
7	101855998	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.2
7	102399755	A->G	+	ENSG00000128563	PRKRIP1	protein_coding	Intergenic	.	.	Alu	0.166667
11	102428439	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.181818
4	102559883	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.3
14	102706063	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
4	102790761	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
4	102814413	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.097561
4	102814426	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0571429
4	102873973	A->G	+	ENSG00000145354	CISD2	protein_coding	Intergenic	.	.	Alu	0.214286
4	102873997	A->G	+	ENSG00000145354	CISD2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103116659	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.583333
10	103118553	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.5
10	103118581	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.363636
10	103118618	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.357143
5	103143246	A->G	+	ENSG00000145725	PPIP5K2	protein_coding	Intergenic	.	.	Alu	0.3
10	103143468	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103143528	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.409091
10	103143533	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.608696
10	103143534	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.454545
10	103143542	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	103143581	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	103143593	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103143868	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.411765
10	103143872	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.235294
10	103143924	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103166817	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103166876	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103166895	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103167234	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103170687	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103170691	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103170800	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103178437	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103178445	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.130435
10	103178598	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.545455
10	103178638	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103179054	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103179057	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103179104	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103179113	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.105263
10	103179156	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.37931
10	103179162	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.08
10	103179176	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103179189	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0689655
10	103179197	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0666667
10	103179198	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0666667
10	103179226	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0625
14	103494401	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.2
14	103682319	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.153846
14	103682325	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.529412
12	104460402	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104460513	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104460517	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104461977	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.04
12	104461978	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0612245
12	104462020	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0612245
12	104462047	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.025
12	104480390	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104480431	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104686106	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.272727
7	105019920	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.04
7	105019921	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.06
7	105023249	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105023252	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105023255	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.25
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.269231
7	105031947	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.266667
7	105032341	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.230769
7	105070440	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.133333
7	105070453	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
6	107930216	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107938322	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.133333
6	107938374	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107938694	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107938827	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107938828	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107939086	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
11	108017287	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
11	108017315	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.272727
11	108017347	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.363636
11	108017355	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.153846
11	108018409	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
8	108218890	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.176471
8	108218922	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.166667
8	108218928	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.166667
8	108218987	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.133333
7	108505491	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.166667
7	108505501	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.352941
7	108505545	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.142857
7	108505556	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.125
7	108505582	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.105263
6	108600426	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.384615
6	108600427	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.769231
6	108600432	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.25
4	109500447	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.166667
4	109500465	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.105263
4	109500469	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.263158
4	109500691	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.133333
4	109500700	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.25
4	109500740	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.153846
4	109500758	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.277778
12	109943584	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.272727
12	109976042	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.25
12	109976043	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.133333
9	110071085	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	110353195	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.3
1	110353218	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
12	110448057	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.230769
12	110448078	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.214286
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.357143
12	110448083	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.142857
12	110448092	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.181818
6	110825983	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110825988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
13	110897198	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.128205
13	110897224	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0540541
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.4375
13	110897396	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0833333
6	110897484	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	110898289	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.0555556
1	110898318	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.0740741
13	110898646	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0588235
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.184615
13	110898665	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0810811
13	110898675	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0757576
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.202381
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.220779
13	110898701	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.025974
13	110898930	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0869565
13	110899024	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.392857
13	110899029	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.28
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.4
10	110924912	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.133333
10	110924977	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.166667
13	111206706	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.166667
13	111206707	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.166667
13	111207184	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.333333
13	111207238	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.454545
13	111207268	A->G	+	ENSG00000102606	ARHGEF7	protein_coding	Intergenic	.	.	Alu	0.2
6	111272072	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	111671467	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.454545
1	112623574	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.230769
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.533333
1	112664048	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112664050	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.6
1	112664056	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112664085	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.15
1	112664105	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112664111	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.294118
1	112664152	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.545455
1	112664157	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
3	113672037	A->G	-	ENSG00000176542	USF3	protein_coding	Intergenic	.	.	Alu	0.1
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.266667
3	113729110	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.230769
3	113729671	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.238095
3	113729771	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
3	113729774	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
3	113729822	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.153846
3	113729830	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.181818
2	113753307	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113753354	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113753393	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.125
2	113753414	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.133333
2	113753419	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113753443	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113949116	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.230769
2	113949120	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.142857
2	113949123	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.142857
3	114061812	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.2
3	114061813	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.454545
3	114346793	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.2
3	114346826	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.1875
3	114346881	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.166667
3	114346882	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.272727
12	116146392	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.416667
12	116146393	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116146401	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116165427	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.764706
12	116165428	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.333333
12	116165469	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0666667
12	116165471	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.321429
12	116165531	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.227273
12	116165551	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	116165558	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.235294
12	116166181	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	116253844	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116253845	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.272727
12	116253856	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.230769
12	116253924	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	116253928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0740741
12	116253929	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.148148
12	116253931	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.16
12	116253956	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0833333
12	116253964	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0769231
12	116253993	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.176471
7	116890667	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.230769
11	116999667	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117063706	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117063707	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	117063817	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117065755	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117066229	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117070342	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0714286
11	117070356	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	117070368	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0810811
11	117070369	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	117070404	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0740741
11	117070405	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.192308
11	117070413	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117070414	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	117070415	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.823529
11	117070543	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117070568	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	1
11	117070571	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.12
11	117070578	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	1
11	117070702	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117070878	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	117070890	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117070957	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	117072325	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117072326	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117076052	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117076053	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0588235
11	117076116	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	117076121	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.172414
11	117076128	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	117180737	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.2
12	117182390	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.2
12	117182483	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.2
12	118193105	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118229211	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118348956	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.1
12	118349002	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118351937	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0833333
12	118351985	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118352051	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.235294
12	118352052	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.117647
12	118352056	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	118352287	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.3
12	118352324	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.636364
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.545455
12	118356464	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118356516	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	118446222	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.333333
11	118446229	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.307692
11	118541934	A->G	-	ENSG00000149582	TMEM25	protein_coding	Intergenic	.	.	Alu	0.2
11	118541939	A->G	-	ENSG00000149582	TMEM25	protein_coding	Intergenic	.	.	Alu	0.4
X	118692516	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
X	118692519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
X	118692708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	118692710	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	118692718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	118692776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
4	118695989	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.214286
8	119830031	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
12	120112264	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.133333
12	120555928	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.272727
9	120849278	A->G	-	ENSG00000226752	CUTALP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.363636
12	120863720	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.272727
12	120863734	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.416667
12	121321189	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.2
12	122412134	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.142857
12	122412142	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.785714
12	122412161	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.363636
12	122412166	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.2
6	122469475	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.0833333
6	122469510	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.1
6	122469694	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	122817368	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.538462
9	122817625	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.2
12	122890486	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.272727
9	122901756	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.266667
9	122901876	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.2
10	123001144	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.133333
8	123032921	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.1
8	123032924	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.428571
8	123032942	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.52381
8	123032969	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.190476
8	123033000	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.36
8	123033008	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	123033022	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.125
8	123033025	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.35
8	123033138	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.315789
12	123159315	A->G	-	ENSG00000051825	MPHOSPH9	protein_coding	Intergenic	.	.	Alu	0.2
9	123248405	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.142857
9	123256115	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.2
9	123256139	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.142857
9	123256156	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.105263
9	123256162	A->G	-	ENSG00000165209	STRBP	protein_coding	Intergenic	.	.	Alu	0.125
8	123324989	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.153846
8	123350958	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.153846
9	124382003	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.0740741
9	124382014	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.0714286
9	124382038	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.392857
9	124382041	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.142857
9	124382042	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.107143
9	124382125	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.5
9	124382421	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.08
9	124382424	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.173913
9	124382445	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.375
9	124382480	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.219512
9	124382481	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.170732
9	124382483	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.243902
9	125158845	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
9	125159101	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.166667
9	125165921	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.166667
9	125179686	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.142857
9	125317504	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.181818
3	125363814	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.3
2	127349263	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127366999	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127786627	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
9	127790866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	127790909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	127790970	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	127791029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
9	127791033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127791448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.233333
9	127791842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.323529
9	127791858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127791902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	127791905	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
9	127791922	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127791927	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	127791963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
9	127791964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
9	127792066	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127792084	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127792109	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
9	127792114	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792218	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792231	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792392	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127792406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127792418	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127793138	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127793146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127793151	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	127793152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127794989	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1
9	127795012	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.2
9	127795118	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.235294
9	127795154	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.115385
9	127795155	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.185185
9	127795180	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
9	127795186	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.157895
9	127795197	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0833333
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.142857
9	127795315	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0909091
9	127795356	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.111111
9	127795390	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0967742
9	127795475	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.117647
9	127795481	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
9	127795482	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.233333
9	127795503	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0909091
9	127795589	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0909091
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.315789
9	127805306	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.619048
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.578947
9	127805351	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0909091
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.607143
9	127805392	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0625
9	127805398	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.272727
9	127805530	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1
9	127806438	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.363636
4	128010344	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.181818
4	128010728	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.2
4	128010841	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.727273
4	128010843	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.454545
4	128031356	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.142857
7	128553310	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	128553311	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.5625
7	128572391	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	128633804	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
7	128633845	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	128734304	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.111111
3	128734310	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128740654	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.272727
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.1875
3	128740856	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
8	129910563	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	129910885	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.727273
8	129910908	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3125
9	129921514	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.153846
8	130001752	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	130001753	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
9	130017647	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	130041112	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.210526
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	131008306	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.181818
3	131008307	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.272727
3	131008371	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.2
5	131270254	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131270267	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131276342	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.4
5	131292033	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0555556
5	131292716	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131292832	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.133333
5	131293492	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131319874	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.15
5	131319894	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.190476
5	131319899	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131319901	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.111111
5	131319904	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.722222
5	131319930	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0833333
5	131319957	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1
5	131319960	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131319983	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131319986	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131319992	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131320204	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131320621	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131320622	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.454545
5	131339770	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0769231
9	131424445	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.411765
9	131424500	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131424501	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.117647
9	131424559	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131424565	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.277778
9	131424566	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.222222
9	131424571	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.125
9	131425115	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131425553	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.454545
9	131426082	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131426083	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0869565
9	131426100	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.272727
9	131426152	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.15
9	131426157	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.236842
9	131426160	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0512821
9	131426187	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0689655
9	131426195	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0882353
9	131426207	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0909091
9	131426211	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.178571
9	131426218	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.16
9	131426231	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.285714
9	131426287	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.153846
9	131448423	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.589744
9	131448581	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.153846
9	131448583	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	1
7	131479904	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.142857
2	131506503	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
2	131506606	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131506610	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
2	131506655	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.416667
2	131506668	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.5
10	131902865	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.384615
10	131902886	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.75
10	131902906	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.214286
10	131902914	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.153846
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.458333
10	131903313	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.173913
10	131903320	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0769231
12	132654345	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.111111
12	132656487	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.461538
5	132917845	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132917850	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.333333
5	132917851	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132917877	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132917881	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.294118
5	132918136	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.533333
5	132918148	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132918238	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.363636
5	132918505	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132918507	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132918562	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.416667
5	132921897	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132921905	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
7	133694173	A->G	+	ENSG00000131558	EXOC4	protein_coding	Intergenic	.	.	Alu	0.2
5	134399945	A->G	+	ENSG00000248559	AC109454.2	antisense	Intergenic	.	.	Alu	0.181818
5	134743075	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.5
7	135474091	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.2
7	135474117	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.2
7	135479347	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.6875
7	135479388	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.214286
7	135479389	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	135748848	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0606061
2	135748916	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0714286
2	135748938	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0606061
2	135748943	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.137931
3	136331376	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.25
3	136331390	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.153846
3	136331561	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.6
3	136709178	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136729710	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.111111
3	136729778	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.157895
3	136729782	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.105263
3	136729798	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.133333
3	136735241	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.3
5	137923235	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.142857
5	137923243	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.166667
5	137923253	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.133333
5	137923267	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.2
5	137979042	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.25
5	137979043	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.125
5	137979048	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.230769
5	137979075	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.166667
5	137979078	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.166667
5	137979085	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.272727
5	137979109	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.454545
5	137980540	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.388889
5	138002303	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.363636
5	138002346	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.333333
5	138002409	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.5625
5	138002419	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.666667
5	138002445	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.529412
5	138416335	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.3
7	138476433	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.3
5	138524444	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
6	138978458	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138978574	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139051196	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.181818
7	139057234	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.157895
7	139102837	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.416667
7	139103133	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.117647
7	139103156	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.1875
7	139103162	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.176471
7	139103323	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
4	139106806	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139106963	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139148240	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0512821
4	139148449	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139148450	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
4	139148458	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139284349	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.133333
5	139284487	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.25
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.2
5	139284494	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.28125
5	139284520	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.210526
5	139284535	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.533333
5	139284536	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.866667
5	139284540	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.583333
5	139304268	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139304280	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.210526
5	139304324	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.111111
5	139304325	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.235294
5	139349521	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.5
5	139349527	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.7
5	139349793	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.285714
5	139349855	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139350453	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	139350455	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	139350510	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.466667
5	139350516	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.666667
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	1
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.384615
3	139388658	A->G	-	ENSG00000184432	COPB2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139400829	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.214286
4	139400834	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.142857
4	139400835	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.214286
4	139401023	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.125
7	139418941	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0833333
5	139568872	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139573222	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.1875
5	140469404	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	140509645	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	140509662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
5	140536168	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	140536187	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.904762
5	140536193	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	140536194	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.333333
5	140536211	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.266667
5	140536223	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.3
5	140536910	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.416667
5	140536946	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	1
5	140536955	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.5
5	140536966	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	140536971	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.384615
5	140536976	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.214286
5	140542479	A->G	+	ENSG00000213523	SRA1	protein_coding	Intergenic	.	.	Alu	0.2
7	140798461	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.0833333
7	140815412	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.235294
7	140815417	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.3125
7	140815418	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.1875
7	140815424	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.142857
7	140815494	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.1875
7	140815510	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.133333
7	140815554	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.384615
7	140815566	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.235294
7	140815571	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.117647
7	140897616	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.166667
3	141892538	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.181818
3	142323092	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.2
3	142323093	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.181818
3	142473684	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.111111
3	142473710	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.181818
3	142482614	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.454545
3	142482615	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.2
3	142483056	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.181818
3	142483138	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.3
2	143373375	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.588235
2	143373376	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.705882
2	143373422	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.416667
2	143373445	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.153846
2	143373452	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.133333
2	143373467	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.142857
2	143373509	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	1
2	143373515	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.166667
2	143373575	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.214286
8	144292775	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.2
8	144292777	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.2
1	145774514	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.454545
1	145774539	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.181818
1	145782014	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.3
1	145794071	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.153846
1	145794081	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.153846
1	146941711	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.272727
7	148751428	A->G	+	ENSG00000055130	CUL1	protein_coding	Intergenic	.	.	Alu	0.2
7	148838166	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.105263
7	148838213	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.181818
7	148869484	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	148869494	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.105263
7	148869510	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.133333
7	148869538	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.176471
7	148869557	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.137931
7	148869565	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.0625
7	148869632	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.285714
7	149243210	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.428571
7	149243246	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.166667
7	149243272	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.3
7	149243278	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.272727
7	149243299	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.4
6	149348299	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.133333
6	149348331	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.214286
6	149578475	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149578476	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149600526	A->G	+	ENSG00000186625	KATNA1	protein_coding	Intergenic	.	.	Alu	0.111111
6	149600534	A->G	+	ENSG00000186625	KATNA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150309419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	150309441	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
1	150309562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
1	150379054	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.4
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.125
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.125
1	150602536	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150602549	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.117647
1	150602562	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.25
1	150613174	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150614119	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150617591	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.4
1	150617894	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.181818
5	150728907	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0645161
5	150728908	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0645161
5	150728940	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.1
5	150728943	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.15
5	150729161	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.0769231
4	150738076	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.111111
4	150738083	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.1
4	150738102	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
4	150738155	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.153846
4	150746613	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
3	150755423	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.117647
4	150841852	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.08
4	150841853	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.125
4	150841859	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.26087
1	150930779	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	150930812	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150930816	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	150930982	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	150930986	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.117647
1	150930998	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.722222
1	150931004	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.277778
1	150931005	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.176471
1	150931054	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.217391
1	150931117	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	150931179	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	150931419	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.3
1	150931422	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.272727
1	150931423	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150931431	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	150931497	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	150931505	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	150957811	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150957842	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	150957952	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.533333
1	150958004	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.352941
1	150958008	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.125
1	150958019	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	150958038	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	150958064	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	150958103	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.428571
1	150958104	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150958117	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	150958419	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	150958451	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	150958479	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.7
1	150958522	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.117647
1	150958525	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.176471
1	150993341	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.125
1	150993488	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.181818
1	150993526	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.153846
4	151110652	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151110653	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151110685	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.266667
4	151110766	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0952381
4	151110795	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.192308
4	151110798	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.12
4	151110851	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0869565
4	151120113	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1
4	151120140	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	151127122	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151130834	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
1	151436581	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151450065	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3
1	151450134	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.363636
1	151450137	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.454545
1	151450235	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
5	151793893	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.7
5	151793907	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.416667
7	152241338	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152309658	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152309659	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
3	152329506	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0606061
7	152391438	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.214286
7	152405347	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152405509	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152426316	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1
7	152426436	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.09375
7	152426469	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.130435
7	152427081	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152427131	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
4	152521931	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.0769231
4	153510842	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.181818
6	154793560	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154793665	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
5	154866793	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.454545
3	155085805	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.181818
3	155093735	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.384615
3	155093736	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.307692
3	155098368	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.5
1	155554158	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.272727
1	155554195	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155681957	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.148148
1	155684633	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155684636	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.636364
1	155684706	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.363636
1	155684714	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.666667
1	155684779	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.3
1	155684787	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155684858	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.266667
1	155922278	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.153846
1	155922417	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.2
1	155922418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.3
1	155924189	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.538462
1	155924195	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.769231
1	155924198	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.166667
1	155924205	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	1
1	155924337	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.08
1	155924338	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.173913
1	155924347	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.269231
1	155924413	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.769231
1	155924417	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.166667
1	155924418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.416667
1	155937122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
1	155937469	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
1	155937525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
1	155937526	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
1	155937552	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	155937590	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
1	155937607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
1	155937745	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	155937815	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
1	155937872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
1	155937884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
1	155937885	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
1	155937910	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
1	155938908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.259259
1	155938921	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
1	155939111	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
1	155939115	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
1	155939316	A->G	-	.	.	.	Intergenic	.	.	Alu	0.32
1	155939434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	155939509	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
1	155939511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	155939523	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	155939533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	155939550	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
1	155939605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	155939952	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
1	155939953	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
1	155939968	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	156129769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
6	156129782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
6	156129783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
6	156835185	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.117647
6	156930971	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	156946102	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.133333
6	156946123	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	156946124	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	156946132	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.3
6	156946257	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.1
7	157232445	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.1875
7	157232452	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.190476
7	157232458	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.0909091
7	157232459	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.0952381
7	157232587	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.2
7	157232595	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.142857
7	157232626	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.153846
2	157332153	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	157386773	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intergenic	.	.	Alu	0.3
6	157916174	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.2
2	158643785	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.333333
7	158792866	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158792880	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158792901	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158792907	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.454545
7	158792989	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.4
7	158793024	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.133333
7	158793031	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.111111
7	158793041	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.222222
7	158799531	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158799543	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158800322	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158800326	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.272727
6	159734199	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.25
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.9
6	159734248	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159734266	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.1
6	159734291	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.08
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.526316
6	159734627	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.1875
6	159734640	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.25
2	159734739	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
2	159734892	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.307692
1	160302687	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.181818
1	160302693	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.166667
1	160302826	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.3
1	160302943	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.266667
1	160302988	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.727273
1	160302990	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.416667
1	160303025	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.2
6	167009271	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.142857
6	167009272	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.4
6	167009332	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.272727
6	167009389	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.181818
6	167009416	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.357143
6	167020722	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.117647
1	167631687	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intergenic	.	.	Alu	0.111111
2	168735951	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.25
3	170152723	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.2
3	170152785	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.2
3	170152799	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.2
2	170946819	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.272727
2	171004038	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.2
2	171765879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
2	171765880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
5	171952635	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.181818
3	172386753	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.636364
5	173081800	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.4
4	173209880	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.125
4	173209886	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.3125
4	173209949	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.153846
4	173210010	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.157895
2	173946800	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0625
2	173946868	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0588235
2	173946915	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0666667
2	173946918	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.214286
1	174003129	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	174003275	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.545455
1	174003790	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
1	174003800	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.222222
1	174003826	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.1
1	174003933	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.153846
1	174003934	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.25
1	174003950	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.153846
1	174016490	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
2	174219584	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.583333
5	177066803	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.181818
5	177066825	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.2
5	177066839	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.181818
5	177066844	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.166667
5	177066849	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.3
5	177071549	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.2
2	177228008	A->G	+	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.222222
2	177228019	A->G	+	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0689655
2	177228134	A->G	+	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0526316
5	178217401	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.363636
5	178217456	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	1
5	178217679	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.111111
5	178217680	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.277778
5	178217681	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.333333
5	178217695	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.136364
5	178217738	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.192308
5	178217770	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.25
3	179173458	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.454545
3	179173464	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.285714
3	179173468	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.190476
3	179445401	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.3
3	179445413	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.3
5	179829847	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	179829945	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	179829983	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	179829987	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.214286
5	180033106	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.363636
5	180033268	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.363636
3	180917844	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	180917849	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.2
3	180930949	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.727273
5	181264392	A->G	+	ENSG00000248275	TRIM52-AS1	processed_transcript	Intergenic	.	.	Alu	0.05
5	181264427	A->G	+	ENSG00000248275	TRIM52-AS1	processed_transcript	Intergenic	.	.	Alu	0.0697674
3	182906505	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182906543	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182906544	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.272727
3	182906839	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.142857
3	182906910	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.157895
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.473684
3	183637728	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.272727
3	183641306	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.105263
3	183641307	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.105263
3	183641367	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.1
3	183641390	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.133333
3	183641398	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.363636
3	183647073	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.153846
3	183647229	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.166667
3	183668910	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0689655
3	183673098	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0769231
3	183675661	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.147059
3	183675695	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0555556
2	184695618	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	1
2	184695620	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.545455
2	184695679	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.2
2	184695695	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.4
3	185757668	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185799286	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.3
3	185799298	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	191075990	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.2
2	191075996	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.545455
2	191076006	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.333333
2	191076014	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.454545
3	195321285	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195321360	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.136364
3	195321361	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.1
3	195417012	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	195417159	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195890642	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.4
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.25
3	196424027	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.2
3	196424521	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.153846
3	196424546	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.166667
3	196481939	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.153846
3	196642950	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.117647
3	196642955	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.117647
3	196642991	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.166667
3	196657057	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.0606061
3	196907224	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196907353	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.176471
3	196908569	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196911689	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.3
3	196911690	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.3
3	196911797	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.230769
3	196911798	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.153846
2	197246412	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.181818
2	197246420	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.2
2	197286559	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.125
1	197759115	A->G	-	ENSG00000213047	DENND1B	protein_coding	Intergenic	.	.	Alu	0.166667
1	197759125	A->G	-	ENSG00000213047	DENND1B	protein_coding	Intergenic	.	.	Alu	0.181818
2	200947790	A->G	-	ENSG00000115942	ORC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	200947798	A->G	-	ENSG00000115942	ORC2	protein_coding	Intergenic	.	.	Alu	0.230769
2	201066170	A->G	-	ENSG00000155744	FAM126B	protein_coding	Intergenic	.	.	Alu	0.153846
2	201133810	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.166667
1	201959854	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.181818
1	202139923	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.307692
2	202227031	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.4
2	202227083	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	202235650	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.153846
1	202753808	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.461538
1	202768739	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.181818
1	202768912	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.2
1	202768914	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.181818
1	202769231	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.2
1	202769522	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.5
1	202769557	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.636364
2	202803237	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.277778
2	202803254	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.142857
2	202803281	A->G	+	ENSG00000163596	ICA1L	protein_coding	Intergenic	.	.	Alu	0.1875
2	203298848	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203300768	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.545455
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303509	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303510	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203303705	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.636364
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.230769
2	203303796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303827	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203304259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.666667
2	203304275	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.307692
2	203304298	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
1	203824103	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	203824108	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.133333
1	203824115	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.125
1	203851926	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.2
1	205744695	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.2
1	205744770	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.272727
1	205745394	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.307692
2	206071103	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.285714
1	211825312	A->G	-	ENSG00000123684	LPGAT1	protein_coding	Intergenic	.	.	Alu	0.2
2	216141956	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.125
2	216141957	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.5
1	224186606	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	224516455	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	227539541	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.3125
2	227539610	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.176471
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.8
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.357143
2	227539691	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.285714
2	227539708	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	227539875	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	227539899	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539900	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.681818
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.631579
2	227540002	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.111111
2	227540016	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.294118
2	227540070	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	229831456	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229884374	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.166667
2	229884375	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.181818
2	229884385	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.9
2	233077579	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233136352	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233136372	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233138229	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.4
2	233138243	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.133333
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.533333
2	233159538	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.315789
2	233159540	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.333333
2	233159543	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1875
2	233159547	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.578947
2	233159573	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.115385
2	233159622	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.35
2	233159635	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.352941
2	233159643	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.705882
2	233205161	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1
2	233205180	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.333333
2	233205198	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233205571	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
1	235108250	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	235145883	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.363636
1	235145888	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.166667
1	235301282	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235301293	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.3
1	235301294	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	235301320	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235301321	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235301335	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.230769
1	235301358	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235301365	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.333333
1	235301366	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235301370	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.214286
1	235301371	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235301372	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235301414	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.642857
1	235301423	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.444444
1	235301431	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235301503	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.714286
1	235301682	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235301965	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235307929	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235307941	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1875
1	235307967	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0740741
1	235307968	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.407407
1	235308323	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.125
1	235318273	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.214286
1	235318274	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.333333
1	235318300	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.625
1	235318314	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0714286
1	235318343	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0869565
1	235318392	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.388889
1	235318393	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235318701	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.111111
1	235323170	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	235323202	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235323243	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235826876	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	236264245	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.153846
1	236264272	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.214286
1	236264287	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.2
1	236264305	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.136364
1	236264310	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.0909091
1	236264312	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.35
1	236264341	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.2
1	236264354	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.111111
1	236264381	A->G	-	ENSG00000086619	ERO1B	protein_coding	Intergenic	.	.	Alu	0.142857
1	236797835	A->G	+	ENSG00000116984	MTR	protein_coding	Intergenic	.	.	Alu	0.153846
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.4
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.3
2	237707437	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.133333
2	238184685	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.15
2	241326992	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
2	241326993	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.16
2	241327849	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.15
2	241327850	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.1
2	241327852	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.1
2	241327867	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.105263
2	241327906	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.176471
2	241327910	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.125
2	241328185	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
2	241328188	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
2	241328256	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.3
2	241328257	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
1	243246299	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.1
1	243246321	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.133333
1	243246343	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.153846
1	246586005	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.2
12	8384407	A->G	-	ENSG00000226091	LINC00937	lincRNA	Intron	.	.	Alu	0.4
3	9828021	A->G	+	ENSG00000250151	ARPC4-TTLL3	protein_coding	Intron	.	.	Alu	0.8
3	9958967	A->G	-	ENSG00000269982	AC018809.2	antisense	Intron	.	.	Alu	0.3
3	9987134	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0588235
3	9987135	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0606061
3	9987139	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0588235
19	11040655	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intron	.	.	Alu	0.25
19	11040661	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intron	.	.	Alu	0.15
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.647059
19	11449925	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.142857
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.153846
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.592593
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.307692
19	11449975	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0588235
19	11449984	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0606061
19	11850848	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.166667
19	11850910	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.2
19	11850946	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.181818
19	11850997	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.142857
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.219512
19	12003436	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0810811
19	12003517	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0625
8	12595275	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intron	.	.	Alu	0.0952381
8	12595276	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intron	.	.	Alu	0.0909091
8	12595282	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intron	.	.	Alu	0.166667
19	12660937	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.5
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.5
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.290323
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0645161
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.607143
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.117647
3	14944964	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.103448
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.3
19	16640087	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.2
19	16640114	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.2
19	16640164	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.333333
22	16653373	A->G	+	ENSG00000100181	TPTEP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
1	20649616	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.166667
1	20649617	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.166667
1	20649625	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.5
1	20649643	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.307692
19	21452161	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.2
19	21452173	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.166667
14	21496090	A->G	+	ENSG00000092203	TOX4	protein_coding	Intron	.	.	Alu	0.25
22	26476511	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.181818
22	26476544	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.6
22	26476547	A->G	-	ENSG00000100099	HPS4	protein_coding	Intron	.	.	Alu	0.727273
6	28123199	A->G	-	ENSG00000269293	ZSCAN16-AS1	antisense	Intron	.	.	Alu	0.0350877
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.10303
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0657895
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0874636
10	28523698	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.103448
17	28722449	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.2
1	29172551	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.230769
1	29173234	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0714286
1	29173235	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.296296
1	29173252	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.214286
1	29173302	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.235294
1	29173349	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.2
13	30367618	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.125
13	30367639	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.142857
13	30367643	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.266667
13	30367687	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.538462
13	30367695	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.615385
16	31123679	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0909091
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.2
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.269231
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.176471
16	31123759	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0930233
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.266667
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.344828
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.233333
1	32781952	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.153846
1	32782072	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.117647
5	38969807	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.2
5	38969862	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.166667
5	38969871	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.133333
19	39491565	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.466667
19	39491588	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.263158
19	39491591	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.411765
19	39491689	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.3125
19	39491701	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.26087
19	39491716	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.0909091
19	39491748	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.142857
15	41298780	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0652174
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.130435
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0526316
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.190476
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.238095
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.242424
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.133333
15	41302240	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0714286
15	41302262	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0645161
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.148148
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.129032
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0740741
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.075
15	41302387	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0714286
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.136364
15	41305345	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.133333
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.230769
15	41305379	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.454545
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.391304
15	41305458	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0869565
15	41305471	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0909091
15	41305473	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.173913
17	41984930	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.181818
17	42014703	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.133333
12	42355630	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intron	.	.	Alu	0.0666667
8	43070107	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intron	.	.	Alu	0.214286
17	44081631	A->G	-	ENSG00000108840	HDAC5	protein_coding	Intron	.	.	Alu	0.166667
1	44626828	A->G	+	ENSG00000187147	RNF220	protein_coding	Intron	.	.	Alu	0.333333
1	44626836	A->G	+	ENSG00000187147	RNF220	protein_coding	Intron	.	.	Alu	0.153846
3	49962979	A->G	+	ENSG00000004534	RBM6	protein_coding	Intron	.	.	Alu	0.636364
15	50360622	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.454545
15	50360623	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.909091
15	50360641	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.7
15	50360646	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.363636
15	50360724	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
15	50360730	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50360752	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.545455
15	50360754	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.272727
15	50360816	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.6
15	50360821	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.363636
15	50360993	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.304348
15	50360995	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0952381
15	50361002	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.105263
15	50361015	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.8125
15	50361024	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50361028	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.153846
15	50361055	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50361061	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50361073	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50366761	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50366794	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50366807	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50366812	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.307692
15	50366822	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50366895	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50366908	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.230769
15	50367004	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.214286
15	50367238	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.545455
15	50367248	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50367252	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.454545
15	50367431	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.125
15	50368047	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50368196	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50368210	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50368215	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368218	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.230769
15	50368239	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50368368	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50368378	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368617	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50368623	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.105263
15	50368624	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50368798	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50369564	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50369578	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.428571
15	50369581	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.307692
15	50369661	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.4
15	50369966	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
15	50369967	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50370038	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50370039	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50370044	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
10	50631435	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.166667
10	50631516	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.181818
10	50631517	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.181818
8	51900001	A->G	+	ENSG00000228801	AC064807.1	antisense	Intron	.	.	Alu	0.307692
14	52721545	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.111111
14	52721546	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.222222
19	52927345	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
19	52927614	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.272727
19	52927639	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
2	53870465	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.107143
14	55285302	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.2
18	55551132	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.3
12	56312700	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.133333
12	56312844	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.192308
17	57449932	A->G	+	ENSG00000279281	AC015883.1	TEC	Intron	.	.	Alu	0.2
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.153846
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.3
19	58584102	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.818182
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.666667
19	58584165	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.3
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.333333
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.105263
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.380952
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.565217
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0833333
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.166667
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.125
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.25
11	65441448	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.153846
17	67355343	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.121212
17	67355371	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.25
12	71774208	A->G	+	ENSG00000080371	RAB21	protein_coding	Intron	.	.	Alu	0.117647
12	71774263	A->G	+	ENSG00000080371	RAB21	protein_coding	Intron	.	.	Alu	0.111111
X	73127189	A->G	-	ENSG00000204118	NAP1L6	transcribed_processed_pseudogene	Intron	.	.	Alu	0.4
11	76441484	A->G	-	ENSG00000255135	AP002360.1	lincRNA	Intron	.	.	Alu	0.0967742
11	76441485	A->G	-	ENSG00000255135	AP002360.1	lincRNA	Intron	.	.	Alu	0.133333
5	78359518	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.0833333
17	81702323	A->G	-	ENSG00000185359	HGS	protein_coding	Intron	.	.	Alu	0.0833333
4	86926005	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intron	.	.	Alu	0.3
4	86926014	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intron	.	.	Alu	0.166667
4	86926015	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intron	.	.	Alu	0.363636
5	89168343	A->G	+	ENSG00000248309	MEF2C-AS1	antisense	Intron	.	.	Alu	0.166667
15	90075276	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.0740741
15	90075277	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.0740741
15	90075318	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.291667
15	90075321	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.0714286
15	90075405	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.153846
15	90075413	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.125
15	90075422	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.444444
15	90075439	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.133333
15	90075462	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.538462
15	90075516	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.2
1	93337969	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0714286
1	93337979	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.153846
1	93338010	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.111111
12	93542624	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.111111
12	93542773	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.142857
12	93542776	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.142857
12	93542928	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.181818
12	93542929	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.272727
12	93542932	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.3
12	93543060	A->G	-	ENSG00000246985	SOCS2-AS1	processed_transcript	Intron	.	.	Alu	0.363636
12	95483420	A->G	+	ENSG00000111142	METAP2	protein_coding	Intron	.	.	Alu	0.0952381
8	98043194	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.136364
8	98043203	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.210526
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.65
8	98043224	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.272727
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.423077
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.625
8	98043306	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.111111
8	98044053	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.25
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.461538
8	98044059	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.357143
8	98044109	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.2
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.75
8	100922656	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intron	.	.	Alu	0.238095
15	101288385	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intron	.	.	Alu	0.1875
X	101393003	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.153846
10	101787851	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.166667
10	101787871	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.363636
10	101787878	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.181818
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.125
10	112449534	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.166667
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.315789
10	112449595	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.227273
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.318182
10	112449646	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.157895
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0909091
10	112450004	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0909091
10	112450010	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
10	112450101	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.1875
10	112450130	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0740741
10	112450139	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0666667
13	114287444	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intron	.	.	Alu	0.173913
13	114287468	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intron	.	.	Alu	0.0833333
11	117159871	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.181818
12	118117432	A->G	-	ENSG00000176834	VSIG10	protein_coding	Intron	.	.	Alu	0.6
12	122883624	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.230769
7	128527035	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.3
7	128527100	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
7	128527473	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.125
7	128528020	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.4
7	128529007	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.3
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.272727
9	129504376	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.333333
9	129504387	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.285714
9	129505980	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.25
9	129506041	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.117647
9	129506770	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.2
12	131897764	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.2
12	131897768	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.166667
5	139282849	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	1
5	139282894	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.125
5	139282948	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.166667
5	140535829	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.1
7	155004523	A->G	+	ENSG00000273344	PAXIP1-AS1	lincRNA	Intron	.	.	Alu	0.0952381
4	158679888	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.142857
4	158679895	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.285714
4	158680006	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.1
1	173864077	A->G	-	ENSG00000234741	GAS5	processed_transcript	Intron	.	.	Alu	0.333333
1	174015958	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.230769
5	178216947	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intron	.	.	Alu	0.2
3	195700654	A->G	+	ENSG00000242086	MUC20-OT1	lincRNA	Intron	.	.	Alu	0.133333
1	211358562	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.142857
1	211358585	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.4
1	211358586	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.5
2	233141298	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.92
2	233141311	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.272727
2	233141312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.73913
2	233141366	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0909091
2	233141416	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.136364
2	233141447	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.285714
2	233141487	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.6
2	233141517	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.25
2	233141527	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.466667
X	299806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0392157
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.037037
17	515932	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	515933	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	767880	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.4
11	767881	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.3
11	769350	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	769367	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	769436	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.307692
11	769449	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	769453	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	769469	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	769489	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	769491	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	2322639	A->G	-	ENSG00000167720	SRR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.647059
7	2434639	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	2434863	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.3
7	2447915	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.3
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.3
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.928571
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.78125
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.129032
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.419355
4	2938372	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0645161
4	2938396	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0377358
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.4
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.491525
4	2938411	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0344828
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.145833
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.704918
4	2938438	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0819672
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.37931
4	2938574	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.354839
4	2938634	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.170732
4	2938638	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.119048
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.923077
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.859649
4	2938673	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0363636
4	2938682	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.188679
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.293103
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.362069
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.83871
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.157143
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.216216
4	2938759	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0694444
2	3544877	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	3544896	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.513514
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	3545056	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.944444
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.266667
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3870985	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.625
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3871165	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3873459	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3875197	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
20	3875200	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3929347	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4653862	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4653867	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	4750627	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4838728	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.027027
19	4838860	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.0210526
19	5909710	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	5909711	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	5909712	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	7095254	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	8269981	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	8270152	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	8686348	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.210526
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.108108
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.08
11	8687224	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.882353
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	8687249	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	8687288	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8687337	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.4
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.580645
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.48
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	9110931	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	9268043	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	9268061	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.125
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	9648470	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.3
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	10150968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	10150974	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.347826
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	10151022	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	10151033	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	10151063	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.3
3	10151069	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	10151127	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.3
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10151143	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	10151791	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.12
3	10151809	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0545455
3	10151810	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0701754
3	10151831	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.104167
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	10151968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0434783
3	10151971	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	10151981	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0961538
3	10152182	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.12
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.464286
3	10152219	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0454545
1	10457219	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.388889
1	10457233	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	10457243	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	10457249	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457257	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10457295	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	10457323	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	10457935	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	10457941	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.16
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10458010	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	1
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	10458677	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10458699	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10458718	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	10458750	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.08
1	10458774	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10458781	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10458783	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10458787	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10458801	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10458816	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10459831	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	10459853	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10459855	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10460123	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.5
1	10460133	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	10460145	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	10460158	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460162	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	10460169	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	10460176	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460201	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.75
1	10460239	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	10460393	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460592	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.148148
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.08
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	10460662	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	10460678	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.478261
1	10460701	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.08
1	10460708	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	10460729	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	10460757	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10460762	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	10460800	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10461037	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	10461180	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	10461203	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	11040445	A->G	+	ENSG00000127616	SMARCA4	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	11040471	A->G	+	ENSG00000127616	SMARCA4	protein_coding	three_prime_utr	.	.	Alu	0.25
19	11040472	A->G	+	ENSG00000127616	SMARCA4	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	11145950	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11146011	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.380952
19	11146026	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.05
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.27027
19	11146584	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.848485
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.259259
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0810811
19	11449718	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.05
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.097561
19	11449796	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	11449797	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	11449809	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	11834868	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	11834963	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	11834994	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	11835011	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	11835016	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	11835024	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	11835030	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	11835067	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.315789
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	11835249	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.470588
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.375
16	11837622	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0235988
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.533333
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.1
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.25
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.2
8	11843087	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.3
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.473684
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.368421
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.769231
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.266667
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	11843970	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.130435
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11914273	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.4
10	12121175	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
10	12121177	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	12121208	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.1
10	12121574	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.1
10	12121692	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13772565	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	13772567	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.857143
19	13772574	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773088	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773170	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	13773189	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	13773192	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	13773206	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	13773209	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	13773247	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773260	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	13773269	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.533333
19	13773270	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	1
19	13773288	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	13773291	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	13773384	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	13773385	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.625
19	13773445	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	13773511	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	13773532	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.736842
19	13773594	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	13773604	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.928571
19	13773605	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.642857
19	13773797	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	13773855	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	13773873	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	13773890	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	13773912	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.290323
16	14650210	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.0517241
10	14907977	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0869565
10	14907978	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.08
10	14908022	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	15409211	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.125
16	15409227	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	15409269	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	15411699	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.2
16	15411864	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.3
1	15665115	A->G	+	ENSG00000197312	DDI2	protein_coding	three_prime_utr	.	.	Alu	0.08
16	15700166	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	15852937	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	16155700	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	16155721	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	16550680	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	16551847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	16551903	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16551919	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16552011	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.185185
19	16552017	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	16641424	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	16641436	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	16641437	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	16645727	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	16645759	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	16645760	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16761161	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	17110574	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	17110696	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.521739
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.28
4	17801244	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.37037
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.178571
4	17801306	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	17801307	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.4375
4	17801308	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	17801317	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	17801322	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801333	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801353	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.125
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.35
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.730769
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17803087	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17803097	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17803112	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.125
4	17803117	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17803162	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.190476
4	17803176	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	18088665	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	18088678	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.75
22	18089953	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.125
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.25
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.352941
17	18274075	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.833333
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	18487868	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	18487893	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.25
1	19216788	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19216819	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	19259060	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.7
1	19260007	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	19260026	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.277778
13	19672219	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.545455
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.1
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.421053
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.238095
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.619048
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.130435
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	19672912	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	19672976	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.380952
10	20286851	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	20286864	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	20651873	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	20651888	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0864198
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	20652030	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.025
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0452261
22	20890524	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	20890954	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	21119317	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21184265	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	21187297	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21187319	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.1
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.08
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.111111
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.642857
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.157895
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.263158
13	21374438	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.444444
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.2
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	21374899	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.545455
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.263158
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.705882
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.6
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.3
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	21805298	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21806204	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	21806242	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	21806288	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21806335	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.205882
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21806437	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21806438	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21806440	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.16
19	23920511	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.2
19	23920547	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.5
19	23921034	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	23921042	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	23921043	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.125
19	23921064	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.2
19	23921100	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	23921125	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.8
19	23921149	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.7
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	24000382	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	24000483	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	24004445	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24025929	A->G	+	ENSG00000205639	MFSD2B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	24077103	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0447761
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0291667
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.025
X	24077198	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.021097
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0837004
X	24077252	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0268456
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.039548
20	25447951	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	25447952	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.461538
6	25986434	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.2
17	27312845	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	27312930	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	28498906	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28498907	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28498918	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	28498921	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28498953	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28498954	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	28499503	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	28499519	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28499556	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	28499602	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	28499616	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28499622	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28499629	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.578947
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.154762
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.096
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0263158
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147059
16	29665184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0243902
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0603448
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0350877
16	29665194	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0327869
16	29665200	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0314961
16	29665239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0547945
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29665290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0327869
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037594
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0469799
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.028777
16	29666235	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.02
16	29666251	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0384615
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29666281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.025641
16	29666313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.8
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.131579
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0384615
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.258621
16	29667599	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0483871
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15873
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0615385
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115942
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.057971
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0779221
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0405405
16	29667633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0447761
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.139535
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0898876
16	29667661	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0227273
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0843373
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	29667688	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0340909
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0263158
16	29667708	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0280374
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.123711
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0638298
16	29667782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.045045
16	29667792	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	29667794	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.108108
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.378788
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.53125
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.104478
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.144928
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.290323
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.267857
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.431034
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.245614
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.128205
16	29668486	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0243902
16	29668493	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.202899
16	29668505	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.027027
16	29668507	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.542857
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.245902
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.112903
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119403
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0987654
16	29668541	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	29668564	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.292308
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.635135
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.149254
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.152174
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0412371
16	29668699	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.025641
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.126582
16	29668709	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.328571
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	29668724	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.145985
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.064
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0944882
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0240964
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.26506
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.240964
16	29668970	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29668991	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0493827
16	29668995	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0227273
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29668997	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	29668998	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.417582
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0816327
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.453901
16	29669030	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119718
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133803
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.146667
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0962963
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147651
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136054
16	29669084	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29669087	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.026087
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121795
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147436
16	29669241	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669258	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	29669266	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	29669282	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29669306	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	29669327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.692308
16	29669343	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669386	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121951
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0697674
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669423	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0289855
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.160494
16	29669461	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1375
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.382022
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.792793
16	29669484	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0232558
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.694915
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.59322
16	29669630	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29669651	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29669660	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.714286
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.730769
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.851852
16	29669681	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29669684	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	29669690	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	29669719	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29669726	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669755	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	29669756	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669821	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669831	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.16
16	29669865	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0375
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0632911
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.101351
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.159509
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.077381
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0533333
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.292793
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113122
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0780488
16	29670090	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.039604
16	29670091	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0269058
16	29670098	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0263158
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0529101
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0420168
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.282828
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.331606
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0696517
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.127273
16	29670186	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0240964
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0510204
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.571429
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.714286
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	29670247	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.211982
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0957447
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	29670312	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0507614
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0662983
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0430622
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.375
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0751174
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0460829
16	29670333	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.027027
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0575916
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0558659
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29670401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0274725
16	29670410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	29670417	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0671141
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.101562
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.132231
16	29670441	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0234375
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.114833
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0382979
16	29670476	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0210084
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
13	30457256	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	30457474	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	30457483	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
13	30457499	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
8	30678389	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	30678397	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0740741
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.170732
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.171429
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.191489
8	30678608	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.311111
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.225806
8	30679037	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.12
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.35
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.227273
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0740741
18	32068949	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0740741
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.26087
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.347826
18	32068987	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0909091
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.16
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.291667
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.15
18	32069090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.157895
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	32069116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.3
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.363636
18	32069158	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	32072103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32072116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	32268941	A->G	-	ENSG00000159055	MIS18A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	32307656	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	32307672	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.16
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	32307796	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	32307809	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	32307814	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.125
2	32307818	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	32308464	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.6
2	32308485	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.5
2	32310736	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32310743	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	32310767	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.4
2	32312737	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	32312738	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	32312870	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	32313974	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	32314336	A->G	-	ENSG00000170262	MRAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.769231
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	32683162	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.4
12	32744662	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	33005247	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.097561
6	33005300	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0487805
6	33005354	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	33005368	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.885714
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.217391
6	33005415	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	33005429	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	33005440	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.642857
6	33005646	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.666667
6	33005675	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	33005742	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.1
6	33005769	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005780	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	33005797	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.24
6	33005798	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.259259
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.178571
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.310345
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.116279
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.1
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.533333
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	1
15	34231722	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.428571
15	34231862	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	34231863	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	34232288	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	34232339	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	34232343	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.1
15	34232392	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	34470191	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	34470616	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.4
19	34470662	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.7
19	34470664	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35601198	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35601289	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35601308	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0352941
1	35602113	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0428571
1	35602126	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	35602127	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0754717
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.296296
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.326087
1	35602187	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.816901
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	35602232	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0394737
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.654321
1	35602250	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0294118
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.6875
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	35602565	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.05
1	35602570	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.204545
1	35602595	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.191489
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.586957
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	1
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.147541
1	35602642	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.156863
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.15
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.225
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.305556
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35602711	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.186441
1	35602763	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0430108
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.204301
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.430233
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.583333
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35661192	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.818182
22	35661238	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	36216777	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.3125
9	36216783	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.5
9	36216787	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.315789
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	36488301	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	36488379	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.125
22	36488442	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	36488492	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	36488497	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
18	36885829	A->G	+	ENSG00000150477	KIAA1328	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.15
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37103934	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	37104519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37104593	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.457143
2	37202390	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	37202435	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37202498	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37202524	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	37202525	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0701754
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.138462
2	37202546	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.06
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.242424
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.16129
2	37202595	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.16
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37204443	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.114286
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.128205
17	37477729	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	37477732	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.818182
17	37477866	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	37477867	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	37477872	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	37477910	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.818182
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0612245
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0816327
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0606061
9	37503457	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0740741
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.037037
9	37503467	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0784314
9	37503493	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0697674
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	37861032	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	37861815	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.25
9	37864318	A->G	+	ENSG00000122741	DCAF10	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	37888869	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.3
22	37889009	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.133333
17	38849508	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	38849515	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	38849532	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.368421
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.6
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.35
17	38849917	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.2
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.4
19	38868415	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	38970718	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	38970719	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	38971783	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	38971832	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.5
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.1
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.464286
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.1
8	38972977	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.08
8	38972993	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.205128
8	38973037	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	39018748	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.045045
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0350877
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.158333
22	39018817	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0606061
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0615385
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.204225
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0384615
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	39019869	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0638298
22	39019880	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0754717
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.169492
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.55102
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.08
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.433962
22	39019976	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0441176
22	39019979	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0333333
22	39020018	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0428571
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.032967
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0222222
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.15
19	39427592	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	39490528	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.5
19	39491907	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	39491939	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	39491979	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	39491980	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	39491986	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.125
19	39492611	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	39492612	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	40466070	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.3
3	40466071	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.2
3	40466112	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.125
3	40466116	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	40466136	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	1
3	40466146	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	40466407	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	40466425	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.16
3	40466426	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	40466431	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.347826
3	40466434	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.318182
3	40466452	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.346154
3	40466484	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	40466485	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	40825834	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	40825838	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.137931
5	40825843	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	40825888	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	40826916	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	40827005	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	40827060	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	41542510	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.5
8	41542518	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.2
8	41542540	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.5625
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.24
19	41871481	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.464286
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.709677
19	41871518	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	41871534	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	41871543	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	41871544	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	41871556	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.72
19	41871558	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.08
19	41871559	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.296296
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.160714
19	41872624	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.06
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.254902
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.289474
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.388889
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0857143
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.425926
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	1
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.107143
6	42057678	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	42207318	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42207350	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.05
6	42207359	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0444444
15	42567144	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.25
15	42567307	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	42567308	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.125
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	42569381	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.266667
15	42569407	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.428571
15	42569419	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.2
15	42569424	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	42569436	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42569472	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	42569542	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.125
6	42886832	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42887319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	42887327	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	42888186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.5
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.6
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.107143
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.28125
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.125
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.631579
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42888332	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.347826
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.304348
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.913043
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.85
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.217391
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.209302
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.723404
6	42889185	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	42889186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	42889231	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.104167
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.483333
6	42889264	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
6	42889283	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	42889288	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.4375
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.25641
6	42889325	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.258621
6	42889382	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.169492
6	42889406	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021965	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
22	44170248	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	44170253	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	44171241	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.125
22	44171249	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.125
22	44171267	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	44171320	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	44171397	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.2
22	44171401	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	44749145	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.409091
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.2
3	44749829	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.6
3	44749851	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.692308
3	44749859	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	1
3	44749905	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	44749906	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.928571
3	44749914	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.214286
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.875
7	44801910	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0483871
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.163265
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.185185
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.560976
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.170732
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.170732
7	44802423	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0348837
7	44835063	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.2
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.666667
20	45079076	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.125
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.318182
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.75
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.4375
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.08
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.538462
22	45341037	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680550	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.3
3	45680551	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.7
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.9
3	45680846	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	45680849	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	45680850	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	45680858	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	45680889	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	45703689	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	45703697	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.8125
19	45703698	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	45703704	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	45954852	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.125
12	45954853	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	45955209	A->G	-	ENSG00000139218	SCAF11	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.037037
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.186567
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0327869
8	47977687	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0658683
16	48353439	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	48354336	A->G	-	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48748204	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.578947
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48749586	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.1
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.25
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.125
3	48749652	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.2
3	48749709	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.2
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	48750201	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.15
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.421053
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.380952
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	48750281	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.1
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.2
3	48750301	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	48750423	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	49470748	A->G	+	ENSG00000161618	ALDH16A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	50325958	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.5
14	50326028	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50326069	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	50326089	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	50326115	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0740741
14	50326179	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50326217	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50326859	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	50326894	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50326961	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	50326966	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	50326985	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	50327149	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	50327150	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.4
14	50327183	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327184	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.6
14	50327214	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50327255	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.294118
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.636364
14	50327323	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50327535	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.4
14	50327566	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	50327569	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50327590	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	50327594	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50327645	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.9
14	50327674	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50327706	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.454545
14	50327724	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50930406	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.25
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.428571
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.4
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.3
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.315789
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	50931505	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.190476
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.1
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.25
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.533333
12	50931762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.15
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.454545
15	51913814	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.25
15	51914409	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.5
15	51914410	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.5
15	51914502	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.3
15	51914545	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	52031763	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52031832	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52031835	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52031850	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52031898	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.47619
19	52031934	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	52031953	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.473684
19	52031956	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.882353
19	52031958	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.125
19	52032551	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52032552	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52373010	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	52373126	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	52775636	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	52775699	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	52775712	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	52775760	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	52775800	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	52825736	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52839063	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.6875
X	54560777	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	54560786	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	1
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	54561024	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.125
X	54561032	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.2
19	55390331	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.3
19	55390341	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	55390346	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.384615
8	56068426	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.666667
8	56068438	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.4
12	56229685	A->G	+	ENSG00000139579	NABP2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.511111
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.25
4	56459990	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0425532
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.147059
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.544554
4	56460126	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.233766
4	56460148	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0379747
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.21519
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0705882
4	56460161	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0357143
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.123596
4	56460707	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0277778
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.364486
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.361905
4	56460751	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0430108
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0736842
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.337079
4	56460856	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0574713
4	56460883	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0434783
4	56460891	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0285714
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.197674
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.5
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	1
4	56460926	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0693069
4	56460931	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.4
4	56460942	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0619469
4	56460950	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0462963
16	56477074	A->G	+	ENSG00000087263	OGFOD1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	57757104	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	58126926	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	59203603	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.08
17	59203604	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	59203630	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	59203649	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.5
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.5
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.3
17	59203708	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.2
17	59203715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.25
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.25
17	59203777	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.12
17	59203789	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	59204152	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0784314
17	59204160	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0392157
17	59204219	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0444444
17	59204275	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0746269
17	59204603	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.05
11	61801943	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
11	63956816	A->G	+	ENSG00000110583	NAA40	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.131579
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.128205
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	64364815	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	64364948	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0512821
15	64365205	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0392157
15	64365331	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.037037
12	64448970	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	64450281	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.823529
12	64450291	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	1
12	64450354	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.727273
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.9
17	64468339	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.958333
17	64468389	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	64468428	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	65149375	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.217391
15	65149386	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	65150138	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.5
11	65413239	A->G	+	ENSG00000126391	FRMD8	protein_coding	three_prime_utr	.	.	Alu	0.0377358
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.4
12	66123404	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0344828
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
7	66153267	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.08
7	66153292	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.08
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153328	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	66153345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	66153806	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0425532
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.15625
7	66153889	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0731707
7	66153899	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0625
7	66153900	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.04
7	66153914	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	66153973	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0377358
7	66153989	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0408163
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.269231
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.137931
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	66154269	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.107143
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.423077
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	66154391	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	66520854	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	67339236	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.769231
1	67409008	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.513514
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.485714
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.535714
1	67409142	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	67409171	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	1
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	68755457	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	68755482	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	68755538	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.666667
11	68755579	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0307692
11	68755589	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
11	68755593	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
11	68755604	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	68755605	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	68755606	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0363636
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	68755660	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.027027
11	68755681	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0253165
11	68755682	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.025974
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.106667
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0410959
11	68755871	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.027027
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.056338
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755951	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
11	68755957	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.028169
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.220779
11	68755990	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.457627
11	68756003	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.12
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.470588
11	68756025	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68756065	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	68756066	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	68768168	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	68768204	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	69210082	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.02
5	69210139	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0225564
5	69210140	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0518519
5	69280917	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	69327345	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.2
16	69327347	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.2
10	70149733	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
10	70149734	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	70372975	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	70372986	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	70373089	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	70379733	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70379759	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70379760	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	70589346	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	71972924	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.125
5	72220318	A->G	-	ENSG00000113048	MRPS27	protein_coding	three_prime_utr	.	.	Alu	0.0512821
5	72220329	A->G	-	ENSG00000113048	MRPS27	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	72234269	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.5
10	72234282	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.538462
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.1
10	72234923	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.25
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0869565
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.24
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.137931
10	72234975	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0689655
10	72234998	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.157895
10	72235160	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.3
10	72235194	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.636364
10	72235305	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.666667
10	72235309	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	72235331	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	72235364	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.5625
10	72235451	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	72286687	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.3
11	72286706	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	73057732	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.3
4	73057755	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.2
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0547945
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0970874
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.28
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.160494
10	73249086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0240964
10	73249087	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0344828
10	73249088	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0348837
10	73249089	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0595238
10	73249097	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0333333
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.031746
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.27027
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.607843
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.291667
10	73249834	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.242424
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.238095
6	73516513	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0266667
14	74058138	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	74231776	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0612245
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0215054
7	74231844	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0449438
7	74231850	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.02
7	74231966	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	74622454	A->G	-	ENSG00000168411	RFWD3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74735609	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	74735633	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.16129
14	74735643	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	74735669	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	74735699	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	1
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	1
14	74735732	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	74735735	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.185185
14	74735850	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	74736145	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.269231
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.115385
14	74736159	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	74736250	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.625
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.411765
14	74736297	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	74736301	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	1
14	74736362	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	74736364	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	74736394	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	75445412	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.3
16	75445479	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.6
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.3
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.8
12	75496115	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.725
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.114286
12	75496292	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	75496311	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	75496317	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	75496341	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.615385
12	75496353	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	75889152	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	75889193	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	75889194	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.08
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	75889853	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	75889923	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	75943098	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75943131	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	77200580	A->G	+	ENSG00000103111	MON1B	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.189655
X	77827514	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
X	77827619	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0615385
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.169811
X	77827729	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	77828088	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	77828144	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.32
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.258065
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	77828403	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.103448
11	78068663	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.571429
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	78069027	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.136364
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.25
11	78069105	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.1875
9	78275840	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	80627466	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0434783
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0434783
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.170732
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	80627513	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.1
5	80627514	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.046875
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.125
5	80627541	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0862069
5	80627547	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0322581
5	80627549	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.03125
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.215686
5	80627604	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	80627605	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.571429
5	80627627	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.464286
5	80628038	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.1
5	80628100	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	82254295	A->G	+	ENSG00000152348	ATG10	protein_coding	three_prime_utr	.	.	Alu	0.25
15	83005449	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.113924
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.021978
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0288462
2	85319449	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0347826
1	85653536	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	89182578	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	89182709	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.357143
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.238095
16	89563592	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.25
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.392857
16	89563628	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.1
6	89636681	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	90083230	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
15	90083240	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
15	90083265	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.020202
15	90083277	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0215054
15	90083297	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0394737
15	90083315	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.027027
15	90083360	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
8	97726819	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	97726820	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.2
8	97727366	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	97727379	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0357143
8	97727380	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0363636
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0857143
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.314286
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.245283
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.04
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.139535
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.5
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0681818
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.945946
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.342105
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.978261
12	98549264	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.05
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.485714
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.263889
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0444444
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	99195826	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.24
2	99195961	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	99195962	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.125
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.478261
2	99195987	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	99195992	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	99196001	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	99196002	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	99196324	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	99196345	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	99196352	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	99196354	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.75
2	99196401	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.952381
2	99196440	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	99196505	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.08
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	99196539	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	99196540	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	99196557	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.636364
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.277778
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.75
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.8125
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.3125
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	100232981	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.32
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.545455
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101009570	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	101010290	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.190476
X	101010312	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.208333
X	101010330	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.125
X	101010349	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101010404	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	1
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.15
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.173913
7	101091569	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	101091571	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.625
7	101091606	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.263158
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.444444
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	101093709	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.130435
7	101093710	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
7	101093715	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	101271520	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	101271556	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	101271570	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	101823964	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	102037170	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.111111
14	102037171	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.166667
14	102037222	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.222222
14	102037271	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.210526
7	102448712	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	102449291	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	102449354	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
7	102449495	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0229885
7	102449568	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0461538
7	102449587	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
7	102449596	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0493827
7	102449600	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0253165
7	102449758	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	102449860	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.04
7	102450031	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	102450075	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
7	102450991	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.037037
7	102451064	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
7	102451080	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	102451081	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0298507
7	102456945	A->G	-	ENSG00000160993	ALKBH4	protein_coding	three_prime_utr	.	.	Alu	0.125
6	106666042	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	109689104	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0491803
4	109689108	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.09375
4	109689113	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.030303
4	109689140	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	109689149	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	109689159	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0377358
2	112576837	A->G	+	ENSG00000125630	POLR1B	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	112684467	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.3
5	115829866	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.538462
5	115830789	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	119538614	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	119538629	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.318182
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.310345
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.636364
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.06
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.7
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	121002911	A->G	-	ENSG00000157895	C12orf43	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	121778339	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	121778368	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.2
6	122444110	A->G	-	ENSG00000111897	SERINC1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	123411154	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411655	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123412196	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	123412239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	123412280	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	123412306	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.5
12	123412310	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123661520	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	123661547	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.103448
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.275862
12	123661553	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	123661590	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	123661766	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.12
12	123661768	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.16129
12	123661770	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.103448
12	123661809	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	123661824	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0816327
12	123661825	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.08
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.170213
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0576923
12	123662054	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	123662121	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.121212
X	123910615	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123910692	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123910721	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123910757	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	123911531	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123911535	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	123911555	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.625
X	123912514	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	125029411	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	125029417	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	125029425	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	125029452	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	125622957	A->G	+	ENSG00000134910	STT3A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	125656230	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	125656244	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.8
11	125675961	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	125675988	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	125676008	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.190476
5	126625554	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.3
5	126625763	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	126625776	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.461538
5	126625781	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625919	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126625931	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126625956	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	126625957	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	126626118	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.4375
5	126626338	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.15
5	126626387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126626392	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	126626452	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	126626483	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	126626484	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	126626616	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	126626876	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	127843890	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.636364
2	127845670	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.2
4	128036999	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.604651
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.880952
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.658537
2	128192929	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
2	128192941	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.193548
2	128192968	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.6
2	128192974	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.538462
2	128192991	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	128193316	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	128193352	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	128193355	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	128193381	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.928571
2	128193391	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.705882
2	128193393	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128193417	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	128193418	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	128193426	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.411765
2	128193432	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	128193435	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	128193452	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	128193465	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.605263
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.386364
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.555556
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	128194192	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	128194433	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	128194447	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	128194467	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	128194501	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	128194529	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	128195104	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
9	128305782	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
9	128305815	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.363636
9	128305828	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	128309300	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	131201055	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201137	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	131201453	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201461	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.4375
5	131201488	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.454545
5	131201516	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	131201527	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201530	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131201531	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.454545
5	131201559	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131201560	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.7
5	131201576	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	131201588	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	131201599	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.95
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.315789
5	131201734	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131202239	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131202240	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.3
5	131202581	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131204218	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	132721316	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.564103
12	132721348	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.119048
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.488889
12	132721375	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.06
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.163265
12	132721413	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0408163
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0434783
12	132721439	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	132721441	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.037037
12	132721448	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	132721471	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	132721473	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0465116
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0930233
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.34375
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.3
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.238095
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	132721693	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.678571
12	132721754	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.304348
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.461538
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.433333
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.129032
12	132722424	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.306122
5	134402261	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.030303
5	134829837	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	134960828	A->G	+	ENSG00000132570	PCBD2	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	141945418	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	141946785	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.6875
3	141946786	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	141946787	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	141946945	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	141946946	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.6
3	141946965	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	141946966	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141946975	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	141947001	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141947482	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.25
3	141947483	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141949870	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	141949900	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.08
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	141949978	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.235294
3	141949981	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	141949984	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.4
3	141950000	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.125
3	141950002	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.1
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.578947
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.45
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.352941
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.552632
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.634146
7	143306519	A->G	+	ENSG00000106144	CASP2	protein_coding	three_prime_utr	.	.	Alu	0.608696
1	145745230	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145745244	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	145745297	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.12
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.411765
1	145745384	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	145745386	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	145745394	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	145745486	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.2
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	145745554	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	145745596	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.3
1	145921978	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.125
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.125
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.4375
1	145921994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.133333
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.444444
1	145922041	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
1	145922058	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.615385
1	145922076	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.538462
1	145922137	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.214286
1	145922141	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.714286
1	145922142	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.466667
1	145922148	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.545455
1	145922162	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.6
1	145922167	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.230769
1	145923078	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.8
1	145923094	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.909091
1	145923163	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.384615
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	149724613	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149724614	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149724619	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.545455
6	149724620	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	149724651	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.4
6	149724652	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.8
6	149724747	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149724748	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149724782	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.428571
6	149724783	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	149724784	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	149724792	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.75
6	149724793	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	149724815	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149725213	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	149725215	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	150308715	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308716	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.4
1	150308721	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	150308756	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.6
1	150308757	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.25
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.3
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.7
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.122807
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.173077
1	150732797	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0566038
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0925926
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0491803
5	151181419	A->G	-	ENSG00000198624	CCDC69	protein_coding	three_prime_utr	.	.	Alu	0.0247934
1	151874634	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	154011217	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0243902
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0777778
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.772727
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.592593
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	1
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.107143
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.22
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.188679
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.27027
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.189189
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.125
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.12766
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.4
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.328125
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
5	157740789	A->G	+	ENSG00000113272	THG1L	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	157740793	A->G	+	ENSG00000113272	THG1L	protein_coding	three_prime_utr	.	.	Alu	0.151515
6	159679825	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.025641
6	159679834	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
6	159679849	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0405405
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.175676
6	159679878	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0394737
6	159680691	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0980392
6	159680693	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.135593
6	159680770	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	160029977	A->G	-	ENSG00000143315	PIGM	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.204545
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.152174
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.697674
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.473684
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.25
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165075533	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.642857
4	165075707	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	165078922	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165078928	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.3
4	165078996	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	175528186	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	175529328	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	177227889	A->G	+	ENSG00000116044	NFE2L2	protein_coding	three_prime_utr	.	.	Alu	0.25
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	179397834	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.722222
3	179397847	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	179397868	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	183491238	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	183491274	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	183491277	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	183672601	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	183672610	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.6
1	184792159	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	184792186	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.4
1	184792214	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	185292220	A->G	+	ENSG00000073803	MAP3K13	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.615385
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	196353682	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	196353688	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.461538
3	196353754	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.25
3	196353759	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.391304
2	200978742	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.727273
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.782609
2	203297930	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297942	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	203298261	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	206122202	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	206122217	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122221	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122242	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	206122264	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206122418	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206122546	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.714286
2	206122837	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	206122856	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206122867	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	206122873	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	206122875	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	206122905	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206122987	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206123001	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	207755012	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	207755025	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.9
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.18
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.392405
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0958904
2	216501804	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0361446
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.134146
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	216501822	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.109091
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.814815
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.116279
2	216501884	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	216501892	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0597015
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0961538
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.134615
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	216501945	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
2	216501950	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	216501951	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	216501976	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.233333
2	216501990	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.794118
2	216501999	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.258065
2	216502059	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216502070	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.106383
2	216502072	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0784314
2	216502077	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0535714
2	216502080	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.277778
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.22973
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	1
2	216502151	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.06
2	216502169	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	216502175	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.05
2	216502177	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	216502178	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	216502180	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.205882
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.527778
2	216502206	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.289474
2	216502216	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.131148
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0895522
2	216502248	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.123077
2	216502255	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.101449
1	220057921	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	220057988	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.7
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	225786975	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	225984621	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	231565604	A->G	+	ENSG00000116918	TSNAX	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	233205636	A->G	+	ENSG00000168918	INPP5D	protein_coding	three_prime_utr	.	.	Alu	0.0625