Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	AA_change	Amino_Acid	Repeat	PN85
19	1992021	A->G	-	ENSG00000133243	BTBD2	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.4
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.25
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0645161
19	8492024	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	upstream_gene_variant	.	Alu	0.44
22	19441666	A->G	-	ENSG00000100084	HIRA	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.105263
3	69076414	A->G	-	ENSG00000144744	UBA3	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.692308
3	9987093	A->G	+	ENSG00000180385	EMC3-AS1	transcribed_unprocessed_pseudogene	five_prime_utr	.	.	Alu	0.0769231
8	37877816	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	five_prime_utr	.	.	Alu	0.2
12	56731526	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.2
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.290323
4	134988	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.5
16	216448	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
9	277209	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.2
9	277304	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.454545
9	277334	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.214286
9	277340	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.545455
9	277346	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.727273
9	277350	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.3
9	277387	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.181818
17	398690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	398800	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	398933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	400428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
17	400429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.178571
17	400825	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	400829	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	400830	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
16	500594	A->G	+	ENSG00000090565	RAB11FIP3	protein_coding	Intergenic	.	.	Alu	0.133333
19	692519	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.3
19	692555	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.133333
19	692581	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.166667
19	693160	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.2
18	696352	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.2
18	696483	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
18	697602	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.181818
18	697841	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	1
18	697891	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.307692
18	697914	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.7
18	697958	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.181818
18	697976	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.25
X	1349146	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
17	1354827	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.2
X	1360728	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.2
X	1363465	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.461538
X	1363475	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.181818
X	1377365	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.4
X	1382959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
X	1383215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	1387961	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.117647
17	1388010	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.222222
17	1388011	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.111111
17	1388022	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.266667
17	1388063	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.181818
X	1398220	A->G	+	ENSG00000236871	LINC00106	lincRNA	Intergenic	.	.	Alu	0.642857
X	1398221	A->G	+	ENSG00000236871	LINC00106	lincRNA	Intergenic	.	.	Alu	0.142857
X	1526959	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	0.666667
4	1701325	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.117647
4	1701326	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.117647
1	1871419	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.545455
1	1872153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	1872176	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.294118
1	1872179	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.176471
1	1872220	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.384615
17	2038218	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.25
17	2038245	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.416667
17	2038306	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.133333
16	2260218	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.142857
16	2260241	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.222222
16	2260248	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.259259
16	2260252	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.230769
16	2260253	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.148148
16	2260288	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0540541
16	2260320	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	2260332	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.12
16	2260337	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.173913
16	2260338	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.521739
16	2260374	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.105263
19	2292291	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.25
19	2292300	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292318	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.3
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.153846
6	2294470	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.5
6	2294683	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.133333
6	2294806	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.133333
6	2335791	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intergenic	.	.	Alu	0.181818
4	2502882	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.75
19	2645194	A->G	-	ENSG00000176533	GNG7	protein_coding	Intergenic	.	.	Alu	0.214286
X	2651388	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
X	2651389	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
X	2651397	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
X	2707236	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.181818
X	2707245	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.153846
X	2707251	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2730776	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.285714
X	2730782	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.153846
X	2730820	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.142857
X	2730837	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0952381
X	2730842	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.12
X	2730879	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0740741
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
X	2744773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
X	2744780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	2744794	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	2744844	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	2744880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	2744943	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
X	2744977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
18	2851314	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.153846
7	2958447	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	1
10	3075724	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.3
10	3075825	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.4
19	3181273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	3181616	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	3182445	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	3182480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	3183709	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	3183724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	3465423	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.117647
9	3465428	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	3470375	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.190476
19	3484294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	3501751	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.416667
9	3501752	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.461538
9	3501760	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.647059
9	3501761	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.529412
9	3501824	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.3
9	3501830	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.4
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.230769
2	3541909	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	3701814	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.647059
11	3701818	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.176471
11	3701824	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.736842
19	3780559	A->G	-	ENSG00000007264	MATK	protein_coding	Intergenic	.	.	Alu	0.2
11	3782655	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3782680	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
X	3819002	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.181818
X	3819139	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.272727
X	3819142	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.363636
17	3911207	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	3911237	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	3911276	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.155556
20	3912703	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.333333
20	3912794	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.25
20	3912803	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.176471
20	3912829	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.363636
20	3912865	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.4
20	3981573	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3981644	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.583333
6	4036805	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.5
11	4097124	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.181818
11	4097134	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.2
11	4097166	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.181818
11	4097188	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.4
11	4116922	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.272727
16	4348794	A->G	-	ENSG00000217930	PAM16	protein_coding	Intergenic	.	.	Alu	0.2
17	4441732	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.8
17	4442318	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.666667
17	4442332	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.6
17	4442478	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.3
17	4442520	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.285714
17	4442521	A->G	+	ENSG00000182557	SPNS3	protein_coding	Intergenic	.	.	Alu	0.153846
16	4669269	A->G	+	ENSG00000102858	MGRN1	protein_coding	Intergenic	.	.	Alu	0.125
20	4819052	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	4819060	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	4819087	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.117647
20	4819100	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.263158
20	4819139	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.105263
20	4819145	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.25
3	5127752	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.25
3	5127823	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.166667
3	5128011	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.117647
3	5128012	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.166667
3	5159481	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.214286
7	5197033	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.176471
7	5325874	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5398477	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.176471
7	5415510	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3125
7	5415515	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3125
7	5415516	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5415563	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	1
7	5415582	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.117647
20	5601507	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.307692
11	5670289	A->G	-	ENSG00000239920	AC104389.4	protein_coding	Intergenic	.	.	Alu	0.2
7	5742692	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.3
7	5742733	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.125
7	5742736	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.357143
19	6046888	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.214286
19	6046965	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.3
19	6046974	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.8
10	6153083	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.166667
10	6153590	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.153846
10	6153598	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.285714
10	6153634	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.375
10	6153670	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.307692
10	6159598	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.181818
10	6198139	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.25
7	6244927	A->G	-	ENSG00000008256	CYTH3	protein_coding	Intergenic	.	.	Alu	0.2
19	6379071	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
19	6379126	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
19	6379150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	6397120	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	1
7	6397524	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.142857
12	6472904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	6548419	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.384615
1	6548420	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.846154
1	6844549	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.25
1	6844565	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.210526
17	7213230	A->G	-	ENSG00000132535	DLG4	protein_coding	Intergenic	.	.	Alu	0.3
17	7213236	A->G	-	ENSG00000132535	DLG4	protein_coding	Intergenic	.	.	Alu	0.166667
6	7219149	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.142857
19	7390435	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.2
19	7392812	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.2
19	7392863	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.666667
19	7392904	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.230769
19	7433756	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	7474114	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	7728302	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
20	8229981	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.117647
20	8402724	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.1
19	8472024	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.2
19	8492069	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.0666667
19	8493858	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	8493890	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.222222
19	8494667	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.176471
19	8494705	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8494717	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8497289	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.8
19	8497292	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
19	8497294	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.545455
19	8497317	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.25
19	8497356	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.2
1	8529366	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.153846
1	8601092	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.133333
1	8601112	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.111111
1	8607678	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.454545
1	8607846	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
18	8616814	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.272727
18	8616818	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.7
17	8919987	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.153846
4	9150201	A->G	-	.	.	.	Intergenic	.	.	Alu	1
11	9444492	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.454545
19	9532421	A->G	-	ENSG00000130818	ZNF426	protein_coding	Intergenic	.	.	Alu	0.3
2	9607153	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.230769
2	9607154	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.230769
1	9669910	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.181818
1	9669945	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.52381
1	9705376	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.111111
1	9705443	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.230769
1	9705463	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.230769
4	9734282	A->G	+	ENSG00000249563	AC098976.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
11	9833488	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.133333
11	9833497	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.153846
1	9927893	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.3
1	9927894	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.666667
1	9927907	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.272727
1	9927932	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.214286
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.484848
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10152314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170732
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.292683
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10153238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
3	10153301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113636
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.205128
3	10153408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
2	10174653	A->G	+	ENSG00000284681	AC007240.1	protein_coding	Intergenic	.	.	Alu	0.181818
2	10199526	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.181818
2	10200107	A->G	+	ENSG00000163009	C2orf48	lincRNA	Intergenic	.	.	Alu	0.272727
2	10638892	A->G	-	ENSG00000115761	NOL10	protein_coding	Intergenic	.	.	Alu	0.3
6	10884375	A->G	+	ENSG00000272162	AL024498.2	protein_coding	Intergenic	.	.	Alu	0.9
19	10963117	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.214286
19	10963118	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.285714
19	10963191	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.416667
19	10963213	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.181818
12	11204755	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	11442696	A->G	+	ENSG00000197548	ATG7	protein_coding	Intergenic	.	.	Alu	0.272727
3	11442701	A->G	+	ENSG00000197548	ATG7	protein_coding	Intergenic	.	.	Alu	0.166667
3	11442800	A->G	+	ENSG00000197548	ATG7	protein_coding	Intergenic	.	.	Alu	0.2
3	11442810	A->G	+	ENSG00000197548	ATG7	protein_coding	Intergenic	.	.	Alu	0.3
19	11450386	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0714286
19	11450392	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.837209
19	11450398	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0869565
19	11450409	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	1
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.222222
12	11660409	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.277778
12	11660452	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.222222
12	11660468	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.173913
12	11660478	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.30303
12	11660479	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.363636
12	11660520	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11660527	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.133333
12	11660562	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.171429
12	11734335	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
12	11808902	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0833333
8	11825317	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.25
8	11825355	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.25
8	11825356	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.166667
8	11825382	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.2
19	11835315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	11845861	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.142857
10	11952613	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.3
18	12031674	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.631579
6	12041267	A->G	+	ENSG00000095951	HIVEP1	protein_coding	Intergenic	.	.	Alu	0.2
10	12374021	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.125
10	12374084	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.2
10	12374139	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.230769
10	12374992	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.15
10	12456682	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.636364
10	12456692	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.7
19	12660864	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	1
19	12660887	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.1
19	12660896	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intergenic	.	.	Alu	0.266667
12	12731128	A->G	+	ENSG00000178878	APOLD1	protein_coding	Intergenic	.	.	Alu	1
6	13230501	A->G	+	ENSG00000112137	PHACTR1	protein_coding	Intergenic	.	.	Alu	0.727273
18	13459036	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.615385
18	13459138	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.272727
18	13459483	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.473684
18	13459487	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.285714
6	13648286	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.272727
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.333333
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.571429
11	13703959	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13703994	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.181818
11	13704027	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.130435
1	13755996	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.416667
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.416667
19	13832473	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
19	13832541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
19	13837702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	14389725	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14399623	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.266667
19	14399632	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
3	14981509	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.333333
3	15018807	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.363636
19	15134513	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
19	15134526	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	15523475	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.25
17	15523480	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.230769
17	15523481	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.25
3	15595748	A->G	-	ENSG00000131373	HACL1	protein_coding	Intergenic	.	.	Alu	0.666667
16	15701186	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15705906	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
3	15716263	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.111111
1	15878922	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.2
16	15952820	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.111111
16	15952839	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.235294
16	15952929	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.117647
16	15952932	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.176471
17	16049665	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
17	16049676	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
19	16080692	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16080741	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.25
19	16080764	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.294118
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16082917	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0769231
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.12
19	16098322	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16098368	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.136364
19	16151308	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.111111
19	16152051	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.117647
19	16155773	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.272727
19	16155774	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.272727
19	16155845	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.117647
19	16156090	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.166667
19	16156092	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	1
19	16156098	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.125
19	16156176	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.176471
19	16156367	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.230769
19	16156397	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.133333
19	16156436	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.1875
19	16156445	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.166667
19	16156446	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.111111
19	16156733	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.272727
19	16156823	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.117647
19	16156875	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.25
2	16419402	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.363636
2	16419406	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.75
2	16419470	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.181818
2	16419480	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.666667
2	16419481	A->G	-	ENSG00000224400	AC010880.1	lincRNA	Intergenic	.	.	Alu	0.666667
17	16440744	A->G	+	ENSG00000175061	LRRC75A-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
2	16446433	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	16638473	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16638474	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.3
19	16640280	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.243243
19	16640281	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.25
19	16644163	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16644258	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.3
19	16644259	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
11	16740612	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.142857
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.26087
11	16740838	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.1
11	16740930	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0526316
11	16740938	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0714286
11	16740941	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.119048
11	16740942	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0952381
11	16740943	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.1
11	16740949	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.08
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.272727
11	17285426	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17285430	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17285434	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17297829	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.6
11	17297988	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	1
11	17298447	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.125
11	17298461	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.368421
11	17298465	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.55
11	17298493	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1875
11	17298523	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.25
11	17298533	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	17336500	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.238095
11	17336675	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	17448754	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.5
16	17456476	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.137931
16	17456487	A->G	-	ENSG00000103489	XYLT1	protein_coding	Intergenic	.	.	Alu	0.125
3	17472267	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.272727
3	17602711	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.25
3	17602737	A->G	-	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.3
17	17705903	A->G	+	ENSG00000108557	RAI1	protein_coding	Intergenic	.	.	Alu	0.181818
22	17752804	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.3
22	17752835	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.153846
6	17814237	A->G	-	ENSG00000137177	KIF13A	protein_coding	Intergenic	.	.	Alu	0.916667
8	17997942	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.125
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.615385
11	18406531	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.133333
11	18406533	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.125
11	18406596	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.142857
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18909714	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18909750	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
1	19301887	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	19301920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	19301926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
1	19301930	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
9	19307197	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.181818
9	19307212	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.230769
9	19307248	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.166667
1	19601503	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19714580	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	19714691	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.5
3	19952093	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.25
22	19958798	A->G	+	ENSG00000093010	COMT	protein_coding	Intergenic	.	.	Alu	0.454545
13	19986847	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	19986927	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.25
13	19986985	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.153846
13	19987050	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
22	20067646	A->G	+	ENSG00000236540	AC006547.1	antisense	Intergenic	.	.	Alu	0.4
X	20131785	A->G	-	ENSG00000173674	EIF1AX	protein_coding	Intergenic	.	.	Alu	0.166667
22	20527877	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
6	20551981	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.545455
6	20552083	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.25
6	20552084	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.25
22	20561400	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20561438	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20561465	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
1	20647262	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.3
1	20647715	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.3
16	20697939	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.125
16	20697940	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.375
1	20750986	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
17	21041022	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.153846
6	21114061	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.333333
6	21114065	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.272727
1	21130162	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.153846
1	21130179	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.214286
1	21130192	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.153846
1	21151367	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.115385
1	21151371	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	21151377	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21151403	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.1875
1	21158236	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.142857
1	21158300	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.25
19	21316262	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.454545
19	21316263	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.272727
19	21405992	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.105263
19	21406035	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.0909091
13	21426770	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.833333
13	21441458	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.181818
13	21441459	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.272727
19	21445738	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.2
19	21445760	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intergenic	.	.	Alu	0.272727
13	21498503	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.230769
13	21498517	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.181818
19	21538158	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.0909091
19	21538496	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.3
10	21657123	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.230769
10	21676537	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.2
19	21821030	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.230769
19	21821033	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.230769
19	21821034	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.538462
19	21821062	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.230769
16	21860779	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.272727
16	21860948	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.333333
16	21860949	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.266667
16	21860988	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.545455
16	21864278	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.117647
16	21864322	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.333333
16	21867388	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.933333
16	21867389	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.8
3	21895451	A->G	-	ENSG00000151789	ZNF385D	protein_coding	Intergenic	.	.	Alu	0.2
1	22062629	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
8	22617093	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.4
8	22617094	A->G	-	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.2
10	22661449	A->G	-	ENSG00000150867	PIP4K2A	protein_coding	Intergenic	.	.	Alu	0.6
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.909091
1	23154525	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.928571
1	23154533	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.928571
1	23154783	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.133333
22	23195514	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.166667
22	23195519	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.166667
1	23333999	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23334012	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.214286
1	23334024	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.272727
1	23334118	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.166667
13	23370003	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.583333
16	23420801	A->G	-	ENSG00000168434	COG7	protein_coding	Intergenic	.	.	Alu	0.2
22	23657035	A->G	-	ENSG00000228315	GUSBP11	processed_transcript	Intergenic	.	.	Alu	0.25
2	23769778	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
2	23769781	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.363636
2	23769783	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.4
2	23769792	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23769801	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23781582	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.133333
2	23781602	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
2	23781957	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.214286
2	23781984	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
2	23781992	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23782009	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23782044	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
2	23841004	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
2	23845609	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23845672	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.294118
2	23845677	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.266667
2	23845744	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1
16	23846489	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
16	23873279	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.181818
16	23873324	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.25
16	23873325	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.125
16	23915476	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.75
16	23915595	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.333333
16	23915598	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.25
19	24054941	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.263158
19	24054949	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.619048
19	24054950	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.35
19	24054999	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.272727
19	24055011	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.214286
19	24055015	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	24055036	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.454545
19	24055039	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.333333
19	24055044	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.181818
19	24055105	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	24055109	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24055115	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24055158	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.214286
19	24055349	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.235294
19	24055396	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.4
19	24055418	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.230769
19	24055424	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24055538	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24055539	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24061869	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24061883	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.153846
19	24061919	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24061938	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
X	24078287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0277778
19	24089975	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.1875
19	24090001	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.666667
19	24090002	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	1
19	24090010	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.111111
19	24090012	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.111111
19	24090078	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.5
19	24090087	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.363636
19	24090091	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
14	24212512	A->G	-	ENSG00000254505	CHMP4A	protein_coding	Intergenic	.	.	Alu	0.0714286
22	24385004	A->G	+	ENSG00000100014	SPECC1L	protein_coding	Intergenic	.	.	Alu	0.538462
2	24514167	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.166667
2	24523805	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.230769
2	24523832	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.2
2	24547785	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.2
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.3
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.133333
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.3125
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.153846
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.285714
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.15
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.4
22	24573724	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.761905
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.142857
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.347826
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.263158
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0952381
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.24
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.230769
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.166667
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.103448
4	25157748	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.333333
4	25157750	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.384615
12	25231250	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.133333
12	25231324	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.357143
8	25254565	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.2
8	25254655	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.153846
8	25254677	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
1	25354427	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.3
1	25354431	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.363636
15	25433322	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.117647
15	25433358	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.3
3	25661138	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.0714286
1	25895267	A->G	-	ENSG00000117632	STMN1	protein_coding	Intergenic	.	.	Alu	0.214286
10	26447190	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.25
10	26482971	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.166667
10	26543281	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.181818
10	26543291	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.3
10	26543305	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.125
10	26543307	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.125
10	26543308	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.333333
10	26543314	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.142857
10	26543346	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.15
10	26543373	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.272727
10	26543387	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.7
10	26543388	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.833333
10	26543449	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.5
10	26543451	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.285714
10	26543453	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.4
1	26715951	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26716034	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.230769
1	26716056	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26716059	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26716099	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
12	27039409	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.4
12	27039432	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.857143
17	27302153	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	27881707	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27881708	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
22	27909266	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.166667
13	28028920	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.428571
13	28029055	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.636364
13	28146965	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28150526	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28188521	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.5
13	28188552	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28193486	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28193522	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.176471
13	28193581	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28193612	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.277778
13	28193622	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.47619
13	28194114	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28264305	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28264306	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28264332	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28264340	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28264460	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.583333
2	28411062	A->G	+	ENSG00000075426	FOSL2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	28538357	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.413793
10	28538430	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0555556
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.189189
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0810811
10	28538488	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.114286
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.047619
10	28538634	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0571429
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.133333
10	28538676	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0714286
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.272727
1	28544444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
10	28544902	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.2
16	28639051	A->G	+	ENSG00000255524	NPIPB8	protein_coding	Intergenic	.	.	Alu	0.2
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.833333
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.363636
17	28721990	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.6
17	28721991	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.666667
17	28722013	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.75
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.166667
2	28764206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28764326	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28764435	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28784805	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28784852	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.176471
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.130435
2	28786641	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28786660	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.263158
2	28792414	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0588235
22	28798401	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.111111
22	28798405	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.142857
22	28798453	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0810811
22	28798516	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.121951
22	28798536	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0555556
22	28798848	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.129032
22	28798852	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.103448
22	28798863	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0487805
16	28957458	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.8
16	28958188	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.166667
16	28958241	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.363636
16	28958248	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	28958262	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.153846
16	28958319	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.130435
1	29178103	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0465116
22	29286501	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29286504	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.266667
16	29410741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	29512489	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
16	29671763	A->G	+	ENSG00000277669	AC009086.2	protein_coding	Intergenic	.	.	Alu	0.5
17	29780598	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.75
17	29780601	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.75
17	29780603	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.75
17	29841824	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.7
16	30283308	A->G	-	ENSG00000183604	SMG1P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
7	30316039	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.5
7	30316245	A->G	+	ENSG00000180233	ZNRF2	protein_coding	Intergenic	.	.	Alu	0.181818
13	30343740	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.125
13	30343746	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.272727
13	30343770	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.166667
13	30343776	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.7
15	30427059	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
17	30773405	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.28
1	30997415	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.117647
14	31019972	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.2
14	31019995	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.222222
14	31019996	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.111111
1	31025667	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.363636
1	31025684	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.230769
8	31070869	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.45
8	31070899	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.307692
8	31070926	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.266667
8	31075621	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.181818
16	31122660	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.411765
12	31309798	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.230769
12	31309803	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.133333
22	31331478	A->G	-	ENSG00000100105	PATZ1	protein_coding	Intergenic	.	.	Alu	1
22	31331546	A->G	-	ENSG00000100105	PATZ1	protein_coding	Intergenic	.	.	Alu	0.6
3	31542998	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.181818
20	31565045	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.181818
20	31565250	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.3
20	31565269	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.111111
22	31639105	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.5
22	31639160	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.5
22	31641059	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.2
6	31752497	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.2
2	31906084	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.315789
2	31906110	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.307692
2	31906171	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.454545
1	31922888	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.333333
2	31930774	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.428571
2	31930778	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	31930784	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	1
2	31990549	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.363636
2	31990627	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.157895
2	31990628	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.380952
2	31990671	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	31999938	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.727273
2	31999988	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.5
2	31999998	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	32000153	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.117647
2	32000257	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.25
5	32152283	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.133333
5	32152309	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.384615
5	32152326	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.384615
5	32165037	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.2
2	32300327	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.272727
10	32364131	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.181818
17	32368830	A->G	+	ENSG00000010244	ZNF207	protein_coding	Intergenic	.	.	Alu	0.0454545
2	32371048	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.608696
2	32371092	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.428571
2	32371145	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
20	32375322	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	32459255	A->G	+	ENSG00000153551	CMTM7	protein_coding	Intergenic	.	.	Alu	0.2
15	32468210	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
15	32468442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
15	32580629	A->G	+	ENSG00000261064	LINC02256	lincRNA	Intergenic	.	.	Alu	0.5
1	32676463	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.181818
1	32676489	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.266667
1	32676516	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.142857
12	32701845	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.272727
12	32701853	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.454545
12	32702024	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.222222
12	32702056	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.0952381
12	32702057	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.363636
12	32702058	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	1
7	32758819	A->G	+	ENSG00000229358	DPY19L1P1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
1	32785791	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.4
1	32802945	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.3
1	33022453	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.166667
1	33022458	A->G	-	ENSG00000004455	AK2	protein_coding	Intergenic	.	.	Alu	0.272727
11	33268516	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	33273317	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33273327	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33273394	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33273398	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33341944	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33341954	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	33341962	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33341980	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.428571
11	33342063	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
3	33419573	A->G	+	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	1
3	33419619	A->G	+	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	1
3	33434410	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	33434426	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	33434449	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.368421
3	33434505	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.176471
3	33434890	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	33434951	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.4
21	33526211	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.5
21	33526295	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.4
21	33526311	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.3
21	33526416	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.2
21	33526453	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.185185
21	33526469	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.08
9	33990728	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.166667
9	33990733	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.25
9	33990774	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.285714
9	33990777	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.75
9	33990819	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.214286
15	34020124	A->G	+	ENSG00000184984	CHRM5	protein_coding	Intergenic	.	.	Alu	1
19	34205209	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
20	34364944	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
19	34377181	A->G	+	ENSG00000105220	GPI	protein_coding	Intergenic	.	.	Alu	0.363636
20	34431785	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.4
19	34440689	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.181818
19	34441832	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.181818
21	34853945	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.294118
21	34854015	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.142857
21	34863692	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.146341
21	34863749	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.3
21	34863755	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.387097
21	34962031	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.235294
21	34962126	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.153846
21	34995656	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
18	35063738	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.210526
18	35063739	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.368421
18	35063806	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.7
18	35063877	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.333333
18	35063905	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.285714
18	35064130	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.230769
17	35076169	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
10	35355544	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.5
10	35355557	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.454545
19	35770614	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.3
19	35770622	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.272727
19	35770623	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.166667
19	35770710	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.357143
19	35770719	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.588235
20	35775502	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.181818
20	35775572	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.153846
20	35775603	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.181818
20	35775604	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.181818
20	35775633	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.384615
20	35775675	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	1
7	35814907	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.3
1	35819566	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3
1	35819674	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
17	35827215	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.818182
17	35827221	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.230769
17	35827323	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.153846
17	35827518	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.285714
17	35827559	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.111111
17	35827585	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.208333
17	35827586	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.333333
17	35827591	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.133333
18	36019246	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.636364
18	36019317	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.166667
18	36019379	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.947368
18	36019380	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.944444
19	36118462	A->G	+	ENSG00000105254	TBCB	protein_coding	Intergenic	.	.	Alu	0.285714
19	36118470	A->G	+	ENSG00000105254	TBCB	protein_coding	Intergenic	.	.	Alu	0.9375
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0265487
1	36476763	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0266667
1	36476821	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.031746
1	36476825	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.031746
1	36476878	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.175
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.14
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.2
1	36476920	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.04
1	36476949	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0373832
1	36476959	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0380952
1	36476961	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0380952
1	36477831	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.2
1	36477832	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	1
17	36529222	A->G	-	ENSG00000278259	MYO19	protein_coding	Intergenic	.	.	Alu	0.9
6	36541960	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.1
20	36578158	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	36578235	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578236	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.5625
20	36578293	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.666667
20	36578328	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.384615
20	36580689	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36583359	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36583551	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36583832	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36583838	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.1
6	36723714	A->G	+	ENSG00000255587	RAB44	protein_coding	Intergenic	.	.	Alu	0.6875
6	36723720	A->G	+	ENSG00000255587	RAB44	protein_coding	Intergenic	.	.	Alu	0.3125
20	36912878	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36913064	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36913069	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.666667
20	36913125	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.107143
20	36913135	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.291667
20	36913145	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.277778
20	36913475	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.266667
20	36913491	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.666667
20	36913905	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36913953	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36914424	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.615385
20	36914488	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	36914489	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.352941
20	36914592	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
22	36932385	A->G	+	ENSG00000100368	CSF2RB	protein_coding	Intergenic	.	.	Alu	0.181818
5	36968659	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.636364
5	36968665	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.181818
5	36968675	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.5
7	37080576	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.25
3	37102595	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.375
3	37102596	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.5
9	37164402	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.2
9	37164635	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.9
9	37164643	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.4
9	37164828	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.545455
7	37200185	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.294118
7	37200206	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0909091
7	37200212	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.666667
7	37200238	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.15
7	37200308	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
5	37216055	A->G	-	ENSG00000197603	CPLANE1	protein_coding	Intergenic	.	.	Alu	0.545455
7	37240043	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.117647
3	37262386	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.125
3	37262438	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37265906	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.6
3	37265920	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
21	37410928	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.230769
21	37410941	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.25
21	37411103	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.1
21	37411233	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.277778
21	37411236	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
19	37425580	A->G	-	ENSG00000196437	ZNF569	protein_coding	Intergenic	.	.	Alu	0.9
21	37427257	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.181818
19	37561114	A->G	+	ENSG00000171817	ZNF540	protein_coding	Intergenic	.	.	Alu	0.181818
4	37619008	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0909091
4	37619017	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.157895
4	37619018	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.105263
4	37619083	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.166667
4	37673358	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.0526316
4	37681708	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	37681711	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.166667
4	37681722	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	37681769	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.153846
6	37829416	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
6	37833679	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.545455
6	37833747	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.3
22	37857176	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37857182	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.3
22	37857243	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.2
22	37857249	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.272727
22	37857255	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37857259	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
6	37870520	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.125
6	37870581	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.357143
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.35
8	37893213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.210526
8	37893269	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.333333
6	37976463	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	37976504	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.363636
10	38022448	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
10	38022473	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.111111
10	38022492	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.222222
10	38022495	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.346154
10	38022496	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.115385
10	38022501	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.0869565
10	38022504	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.208333
10	38022550	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.227273
10	38024038	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
10	38024080	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.125
10	38024091	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
10	38031375	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.214286
10	38031449	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.2
8	38239524	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.153846
8	38239540	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38239544	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38239566	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.272727
8	38239572	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.363636
8	38239576	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.25
21	38744657	A->G	-	ENSG00000223806	LINC00114	lincRNA	Intergenic	.	.	Alu	0.25
19	38844958	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.378378
19	38844997	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.346154
19	38844999	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0869565
20	38851952	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.142857
2	39111797	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.117647
2	39111862	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.230769
2	39111868	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.461538
2	39115491	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
2	39115547	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.1
2	39115553	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.214286
2	39115575	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	39115636	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39115637	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.272727
2	39115646	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.545455
2	39115697	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.333333
2	39268760	A->G	-	ENSG00000011566	MAP4K3	protein_coding	Intergenic	.	.	Alu	0.230769
17	39286980	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.2
17	39394689	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.181818
4	39725220	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39774534	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.125
1	39874693	A->G	-	ENSG00000043514	TRIT1	protein_coding	Intergenic	.	.	Alu	0.5
4	39895790	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39896121	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39896126	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39896187	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	40081991	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.153846
4	40081992	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.230769
22	40130593	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40130594	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.307692
22	40130703	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.272727
22	40130732	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.333333
22	40133849	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40133850	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.133333
4	40229397	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.3
4	40229523	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.3
1	40275631	A->G	+	ENSG00000084073	ZMPSTE24	protein_coding	Intergenic	.	.	Alu	0.461538
1	40275637	A->G	+	ENSG00000084073	ZMPSTE24	protein_coding	Intergenic	.	.	Alu	0.461538
15	40986392	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.727273
15	40986401	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.272727
15	40986410	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.3
13	40997325	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.230769
13	40997355	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1875
13	40997366	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	40997422	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	40997428	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0625
13	40997429	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	41033406	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.416667
15	41038152	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.142857
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
20	41041214	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.4
20	41041216	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.181818
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
13	41052104	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.4
13	41057249	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
X	41199073	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.142857
X	41199077	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.615385
3	41215185	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0625
3	41215264	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.111111
3	41215269	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0545455
19	41266493	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.25
15	41287269	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	1
15	41287279	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	1
20	41609933	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.166667
20	41609955	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.153846
20	41609989	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.153846
20	41609994	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.916667
20	41609995	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.416667
20	41610036	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.285714
20	41610051	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.214286
20	41610052	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.153846
20	41610061	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.117647
20	41610099	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.5625
20	41610122	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.388889
20	41610123	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.111111
20	41610128	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.157895
3	41913358	A->G	-	ENSG00000168038	ULK4	protein_coding	Intergenic	.	.	Alu	1
3	41913364	A->G	-	ENSG00000168038	ULK4	protein_coding	Intergenic	.	.	Alu	0.181818
6	42034683	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.3
6	42034684	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
15	42183131	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.142857
17	42277848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
17	42277867	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	42277880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	42277884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	42363407	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.363636
8	42531826	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42531827	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42531891	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.333333
8	42531915	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.135135
8	42531930	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.108108
8	42531957	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.269231
8	42531967	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42532024	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
8	42532091	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.111111
8	42532094	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1
8	42532097	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.15
8	42532116	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.105263
8	42532118	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.307692
8	42533722	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1875
8	42533756	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.333333
8	42533832	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42533838	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42533841	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.133333
8	42533859	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	1
8	42533887	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.315789
10	42617268	A->G	-	ENSG00000196693	ZNF33B	protein_coding	Intergenic	.	.	Alu	0.181818
21	42843484	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.153846
21	42843513	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.1875
21	42843526	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.111111
21	42843532	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.0952381
21	42843549	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.190476
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.583333
13	42988989	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.2
13	42989004	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.3
22	43009998	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.176471
22	43010007	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.5
22	43010008	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.111111
22	43010010	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.294118
22	43010045	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.111111
22	43010147	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.25
22	43010149	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.153846
5	43128402	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.176471
5	43128470	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.176471
5	43130143	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	43130184	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
2	43171708	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	43171709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
2	43171739	A->G	-	.	.	.	Intergenic	.	.	Alu	0.458333
2	43176131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
2	43195850	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
2	43195877	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	43195914	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	43195981	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	43195984	A->G	-	.	.	.	Intergenic	.	.	Alu	0.875
17	43226096	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.846154
17	43226120	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.352941
17	43320351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.923077
17	43320352	A->G	-	.	.	.	Intergenic	.	.	Alu	0.923077
11	43473764	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.3
11	43473773	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.2
11	43473790	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.272727
6	43615907	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.25
6	43615933	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.2
6	43615946	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.666667
6	43616133	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.6
6	43616395	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.133333
6	43616418	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.133333
6	43616442	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.2
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.235294
6	43616510	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.181818
7	43996541	A->G	-	ENSG00000214783	POLR2J4	processed_transcript	Intergenic	.	.	Alu	0.181818
2	44223554	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44223695	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.294118
2	44223737	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.181818
2	44223766	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.235294
17	44388419	A->G	-	ENSG00000005961	ITGA2B	protein_coding	Intergenic	.	.	Alu	0.166667
15	44409904	A->G	+	ENSG00000166734	CASC4	protein_coding	Intergenic	.	.	Alu	0.166667
2	44413476	A->G	+	ENSG00000143919	CAMKMT	protein_coding	Intergenic	.	.	Alu	0.2
2	44413491	A->G	+	ENSG00000143919	CAMKMT	protein_coding	Intergenic	.	.	Alu	0.153846
2	44413532	A->G	+	ENSG00000143919	CAMKMT	protein_coding	Intergenic	.	.	Alu	0.5
1	44431299	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.333333
1	44434658	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44434893	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.5
1	44434896	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.222222
1	44434898	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.111111
1	44434904	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.222222
1	44434906	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.117647
1	44434920	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44434923	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.117647
1	44434960	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.454545
1	44434961	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44434968	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44434969	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.428571
17	44445538	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.153846
17	44445631	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.4
1	44463216	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.4
1	44463292	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44463325	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.25
1	44475927	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44475944	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.08
1	44494059	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44494127	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44503072	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44503214	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.416667
1	44503249	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.6
1	44503322	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44527883	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.5
1	44529872	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.636364
1	44529873	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44529874	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.454545
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44832903	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44838082	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.535714
17	44867416	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.2
X	44883888	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.555556
X	44883913	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.16
X	44883917	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.08
X	44883952	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0952381
X	44883955	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.117647
X	44883981	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44883982	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44883987	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.0909091
X	44884023	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44884054	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44893107	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
X	44893116	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44893118	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.125
19	45012585	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
X	45045424	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	45045507	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
19	45066543	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.5
19	45066544	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.6
17	45218235	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.142857
14	45248249	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.2
17	45506636	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	45506660	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
17	45506688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.310345
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
1	45653917	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.333333
1	45653918	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.4
1	45653954	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.6
1	45671252	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45671307	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45671330	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.333333
1	45671347	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
1	45671428	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45671429	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.3
2	45716396	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.25
12	45899151	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.416667
12	45899161	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45899165	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.416667
12	45899350	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45936175	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.5
12	45954679	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0350877
17	46077696	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.2
16	46610767	A->G	-	ENSG00000171241	SHCBP1	protein_coding	Intergenic	.	.	Alu	0.2
X	46655149	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.181818
X	46655154	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.166667
X	46655155	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.181818
X	46655163	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.153846
X	46655164	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.307692
X	46655167	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.166667
X	46655178	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.181818
X	46655217	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.357143
19	46709053	A->G	-	ENSG00000105287	PRKD2	protein_coding	Intergenic	.	.	Alu	0.166667
3	46975450	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.0952381
20	47288499	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.222222
20	47288502	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.176471
20	47288572	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.117647
20	47288595	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.192308
20	47288630	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.137931
20	47288660	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.178571
20	47288662	A->G	-	ENSG00000101040	ZMYND8	protein_coding	Intergenic	.	.	Alu	0.1875
16	47301535	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.181818
16	47301545	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.6
16	47301560	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.636364
16	47301564	A->G	-	ENSG00000129636	ITFG1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47367882	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.266667
11	47367896	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.1875
11	47367960	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.470588
11	47367981	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.916667
11	47367982	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47368025	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.5
11	47368026	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.4
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47480879	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.4
11	47480924	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.235294
11	47480969	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47481323	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47481362	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3125
11	47481411	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
3	47489218	A->G	-	.	.	.	Intergenic	.	.	Alu	1
3	47489219	A->G	-	.	.	.	Intergenic	.	.	Alu	1
11	47513996	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.133333
11	47514109	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.111111
11	47542560	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.375
3	47604836	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	47604837	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.75
8	47786874	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.105263
8	47786907	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.166667
2	47793526	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.6
2	47878425	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
2	47878434	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.166667
2	47878561	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.166667
2	47878584	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.111111
2	47878629	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.105263
2	47878832	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
4	48141748	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.115385
4	48141772	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0555556
4	48141785	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.357143
4	48141811	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.192308
4	48141820	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.636364
4	48141821	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.238095
4	48141847	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.2
4	48141877	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.115385
4	48141878	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.321429
4	48141886	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	1
4	48141900	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.291667
4	48141926	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.0571429
4	48142352	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.636364
4	48142387	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.166667
16	48377492	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.272727
19	48459474	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.363636
19	48620655	A->G	+	ENSG00000063176	SPHK2	protein_coding	Intergenic	.	.	Alu	1
19	48620690	A->G	+	ENSG00000063176	SPHK2	protein_coding	Intergenic	.	.	Alu	1
12	48664718	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	48664787	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.272727
12	48664803	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48697423	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48697431	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.4
17	48866922	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	48866944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	48867029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	48867162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	48867453	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	48936654	A->G	+	ENSG00000128815	WDFY4	protein_coding	Intergenic	.	.	Alu	0.571429
10	48936658	A->G	+	ENSG00000128815	WDFY4	protein_coding	Intergenic	.	.	Alu	0.428571
20	49180461	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.181818
18	49318929	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.333333
18	49318938	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
17	49336295	A->G	-	ENSG00000198740	ZNF652	protein_coding	Intergenic	.	.	Alu	0.133333
3	49368846	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.272727
3	49369110	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.142857
3	49407330	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.5625
3	49407331	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.533333
3	49407371	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0930233
3	49407374	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0612245
3	49407414	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.15625
3	49407417	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.354839
14	49831445	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.2
3	50038644	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.363636
3	50038646	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.166667
3	50038653	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.181818
3	50038654	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.272727
3	50038712	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50038722	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50038726	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.3
13	50039131	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.181818
15	50098460	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.142857
15	50098483	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.142857
15	50099418	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.181818
3	50112221	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50112269	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.272727
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1875
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.363636
12	50153418	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.166667
12	50153481	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.5
12	50153483	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.5
12	50153512	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.272727
12	50162007	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.307692
14	50193107	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.272727
14	50197749	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.285714
14	50197821	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.357143
14	50197826	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.461538
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	1
14	50197887	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50197899	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	1
14	50197923	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.272727
14	50197962	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.333333
15	50332076	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.117647
15	50332121	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.333333
15	50334646	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.4
15	50334652	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50334677	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50335347	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.111111
3	50335389	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	50335406	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	50335409	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.173913
3	50335445	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	50335455	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50335583	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.105263
3	50335662	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.25
15	50346886	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.153846
15	50347009	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.111111
15	50582178	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.272727
15	50582208	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.4
1	50642926	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.153846
17	50730023	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.4
17	50730115	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.384615
17	50730117	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.692308
17	50730138	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.4
17	50730365	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.157895
17	50730390	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50730398	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50730400	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.272727
17	50730401	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.583333
17	50730420	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50730430	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50730450	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.230769
17	50730464	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.411765
17	50730472	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.210526
14	50800947	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.2
14	50800962	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.2
14	50800987	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.181818
14	50803964	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.230769
14	50803965	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.153846
14	50803993	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.142857
14	50804001	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.166667
20	50907106	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
13	50939236	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.230769
13	50939399	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.307692
13	50939440	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intergenic	.	.	Alu	0.333333
1	51451974	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.2
13	51708231	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.181818
8	51896128	A->G	-	ENSG00000253475	AC103769.1	sense_intronic	Intergenic	.	.	Alu	0.105263
19	52059109	A->G	-	ENSG00000260160	AC011468.1	sense_overlapping	Intergenic	.	.	Alu	1
19	52193857	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.3
19	52194033	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.153846
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.545455
19	52298462	A->G	+	ENSG00000198464	ZNF480	protein_coding	Intergenic	.	.	Alu	0.3125
19	52298468	A->G	+	ENSG00000198464	ZNF480	protein_coding	Intergenic	.	.	Alu	0.1875
15	52382080	A->G	-	ENSG00000197535	MYO5A	protein_coding	Intergenic	.	.	Alu	0.3
15	52382085	A->G	-	ENSG00000197535	MYO5A	protein_coding	Intergenic	.	.	Alu	0.3
3	52414951	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.1875
3	52414953	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.533333
1	52441316	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.272727
1	52531976	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.166667
1	52532026	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.538462
1	52532052	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.363636
19	52642486	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.153846
19	52642500	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.5
19	52647527	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.363636
19	52647541	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52647549	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.357143
19	52647555	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.142857
8	52698854	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52698862	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.08
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.28125
8	52698909	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.15
14	52714633	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.285714
14	52714642	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.428571
19	52723395	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intergenic	.	.	Alu	0.16129
19	52941054	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
12	53014291	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.0588235
12	53014297	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.0606061
12	53014301	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.0571429
6	53320500	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.4
6	53320504	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.3
6	53330636	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.136364
6	53330660	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.190476
5	53605893	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.833333
5	53605899	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.692308
12	53668400	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.5625
12	53668401	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.333333
12	53668419	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.133333
12	53668444	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	53977134	A->G	+	ENSG00000170634	ACYP2	protein_coding	Intergenic	.	.	Alu	1
2	53977148	A->G	+	ENSG00000170634	ACYP2	protein_coding	Intergenic	.	.	Alu	1
2	53977151	A->G	+	ENSG00000170634	ACYP2	protein_coding	Intergenic	.	.	Alu	1
8	53993038	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.2
8	53993093	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.153846
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.384615
1	54032988	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.272727
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.473684
X	54562721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
X	54563765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	55275806	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.111111
14	55278711	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.176471
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55278752	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.130435
14	55278762	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1
14	55278780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.130435
14	55278804	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0689655
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.318182
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.136364
14	55278859	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.454545
14	55278950	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.882353
14	55279112	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55279122	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0555556
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.5
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.15625
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.307692
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.533333
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.294118
4	55412229	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.45
4	55412234	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0555556
4	55412235	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.138889
4	55412243	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0810811
4	55412273	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.0625
4	55412300	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.307692
12	55792509	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.125
12	55792510	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.125
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55890005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55890063	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
4	55960986	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.25
4	55961644	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.166667
7	56065893	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.3
8	56068901	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.1
8	56068904	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0909091
8	56068907	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0909091
8	56068914	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.590909
8	56068927	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.142857
8	56068973	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.105263
8	56068991	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.166667
8	56069001	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0769231
8	56069025	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.117647
8	56069030	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.25
7	56074987	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.8
18	56611818	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.307692
18	56611843	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.111111
12	56685873	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.2
12	56730573	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.428571
12	56730574	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.2
12	56731396	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.571429
12	56731397	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.461538
12	56731435	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.285714
12	56731436	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.214286
12	56731462	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.5
12	56731463	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4
15	56971382	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.133333
4	56992254	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.3
15	57098065	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.25
17	57409754	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0606061
17	57409820	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.105263
17	57409831	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.15
17	57409845	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.111111
17	57409858	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0625
17	57409861	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0645161
17	57409887	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0714286
17	57409888	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.0689655
17	57409914	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.181818
17	57409929	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.173913
12	57421241	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.583333
12	57421263	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.153846
12	57421267	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.153846
17	57427319	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.117647
17	57427386	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.235294
17	57450592	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.263158
17	57450610	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.130435
17	57450626	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.28
19	57454549	A->G	-	ENSG00000268163	AC004076.1	protein_coding	Intergenic	.	.	Alu	0.2
17	57460239	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.08
12	57484103	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	Intergenic	.	.	Alu	0.1
12	57484121	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	Intergenic	.	.	Alu	0.75
17	57500744	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.133333
17	57504766	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.363636
17	57504793	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.416667
17	57504800	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57504824	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	57647167	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.230769
17	57647322	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
17	57647338	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.105263
17	57647393	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.833333
17	57647394	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.578947
3	57677611	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.25
3	57677682	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.25
19	57810214	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.272727
19	57812121	A->G	+	ENSG00000178935	ZNF552	protein_coding	Intergenic	.	.	Alu	0.4
19	57866863	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.25
19	57866864	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.25
19	57866891	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.153846
19	57866917	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.25
19	57866918	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.6
19	57866934	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.125
19	57866981	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.333333
19	57867012	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.684211
19	57869175	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
14	58217469	A->G	+	ENSG00000131966	ACTR10	protein_coding	Intergenic	.	.	Alu	0.2
19	58265998	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.25
19	58266034	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.416667
19	58266085	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.2
19	58266086	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.5
19	58272756	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.166667
19	58272760	A->G	+	ENSG00000198131	ZNF544	protein_coding	Intergenic	.	.	Alu	0.181818
19	58314369	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.5625
19	58314500	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.333333
19	58314506	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.625
19	58314517	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.133333
19	58314520	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.25
19	58314568	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.416667
19	58314576	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.181818
19	58314577	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.363636
17	58340507	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.25
17	58340523	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.142857
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.5
17	58340569	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.117647
17	58340745	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.25
17	58340748	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58340761	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.583333
17	58340886	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58340889	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.25
17	58340944	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58340952	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.1
17	58341681	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.433333
17	58341722	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341780	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.173913
17	58341782	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.12
17	58341783	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.208333
17	58341784	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.08
17	58341785	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.16
17	58341786	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58341789	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341815	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.541667
17	58341825	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0909091
17	58341830	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.190476
17	58341856	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.117647
17	58341861	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.5
17	58341881	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.173913
17	58341891	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.1
19	58565006	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.25
19	58565045	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.136364
15	58930252	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.0952381
3	60066785	A->G	-	ENSG00000189283	FHIT	protein_coding	Intergenic	.	.	Alu	0.142857
3	60066789	A->G	-	ENSG00000189283	FHIT	protein_coding	Intergenic	.	.	Alu	0.153846
3	60066834	A->G	-	ENSG00000189283	FHIT	protein_coding	Intergenic	.	.	Alu	0.2
14	60272589	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.117647
8	60518491	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
5	60961659	A->G	+	ENSG00000164182	NDUFAF2	protein_coding	Intergenic	.	.	Alu	0.4
17	61175886	A->G	+	ENSG00000141376	BCAS3	protein_coding	Intergenic	.	.	Alu	1
2	61359913	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.210526
5	61378916	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.4
5	61378938	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.681818
5	61379031	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.2
5	61379106	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.533333
5	61379113	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.333333
2	61502857	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61503129	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.117647
2	61503175	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61503385	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61511965	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61512002	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61526813	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61526845	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61527956	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.08
2	61527957	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.08
2	61528023	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.322581
2	61528024	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.225806
2	61528065	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.125
17	61998660	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	61998696	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	61998697	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.230769
17	61998724	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.538462
17	61998798	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	61998815	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3125
17	61998817	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.307692
17	61998818	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	61998880	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.454545
17	61998885	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.5
5	62323136	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.125
12	62330451	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.142857
12	62330859	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.1
12	62332043	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
17	62518490	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.117647
17	62815031	A->G	-	ENSG00000265000	AC068512.1	lincRNA	Intergenic	.	.	Alu	1
11	62820660	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.230769
11	62820673	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62887582	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.333333
11	62887816	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.466667
11	62887824	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.25
18	63274422	A->G	-	ENSG00000171791	BCL2	protein_coding	Intergenic	.	.	Alu	0.25
18	63274423	A->G	-	ENSG00000171791	BCL2	protein_coding	Intergenic	.	.	Alu	0.166667
18	63277422	A->G	-	ENSG00000171791	BCL2	protein_coding	Intergenic	.	.	Alu	0.4
18	63277458	A->G	-	ENSG00000171791	BCL2	protein_coding	Intergenic	.	.	Alu	0.166667
10	63291993	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.5
10	63292119	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.3
10	63292120	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
1	63420605	A->G	+	ENSG00000088035	ALG6	protein_coding	Intergenic	.	.	Alu	1
20	63526955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
15	63545701	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.5
15	63545714	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.25
15	63545715	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63545793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.4
15	63545795	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.15
15	63545796	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63545850	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.705882
15	63545860	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63545891	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.235294
15	63545896	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63545910	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.416667
15	63545926	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.214286
15	63547491	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.2
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.181818
15	63547636	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63547655	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.125
15	63547923	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0952381
15	63548026	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0952381
15	63548031	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.882353
12	63588850	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.0909091
12	63588869	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.133333
12	63588882	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.166667
12	63588918	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.5
12	63589020	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.181818
15	63675936	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.153846
15	63675996	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.636364
15	64098461	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64098466	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.153846
15	64109252	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.4
15	64109258	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
7	64345481	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.1875
7	64345513	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.117647
7	64345514	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.117647
7	64345519	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.222222
7	64345567	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.636364
7	64345568	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.818182
7	64345659	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.466667
12	64629843	A->G	+	ENSG00000225195	AC078962.1	sense_intronic	Intergenic	.	.	Alu	0.636364
12	64629844	A->G	+	ENSG00000225195	AC078962.1	sense_intronic	Intergenic	.	.	Alu	0.545455
15	64646819	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.3
17	64650287	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.181818
17	64650296	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.357143
17	64655395	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.285714
17	64655396	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.214286
17	64655402	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.230769
17	64655404	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.166667
15	64956458	A->G	-	ENSG00000166839	ANKDD1A	protein_coding	Intergenic	.	.	Alu	0.272727
15	65176656	A->G	-	ENSG00000166855	CLPX	protein_coding	Intergenic	.	.	Alu	0.214286
15	65176658	A->G	-	ENSG00000166855	CLPX	protein_coding	Intergenic	.	.	Alu	0.214286
15	65296676	A->G	+	ENSG00000138617	PARP16	protein_coding	Intergenic	.	.	Alu	0.206897
15	65296682	A->G	+	ENSG00000138617	PARP16	protein_coding	Intergenic	.	.	Alu	0.222222
15	65297168	A->G	+	ENSG00000138617	PARP16	protein_coding	Intergenic	.	.	Alu	0.166667
15	65542376	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.142857
15	65542390	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.25
15	65542397	A->G	+	ENSG00000074696	HACD3	protein_coding	Intergenic	.	.	Alu	0.769231
15	65718917	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
15	65728551	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
8	65729649	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.133333
8	65730235	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	65730278	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.333333
8	65730279	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.416667
8	65730283	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.307692
8	65730286	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.25
8	65730345	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.416667
8	65730349	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.214286
8	65730350	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	65730356	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.416667
8	65730357	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.416667
8	65730710	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.416667
8	65730731	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.545455
15	65746538	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.666667
15	65746551	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.272727
5	66089788	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	66089789	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	66202516	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.285714
12	66202694	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	66629807	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0869565
11	66629984	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0740741
11	66635027	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.478261
11	66635105	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.787879
11	66635117	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0930233
11	66635153	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.08
11	66635154	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.12
11	66635167	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.269231
11	66635172	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66635239	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	66635248	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66635249	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.458333
11	66635261	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	1
11	66635353	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.833333
11	66635360	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.615385
11	66635375	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0454545
11	66635414	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.130435
11	66635415	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0652174
11	66635423	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.122449
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.27451
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.307692
11	66635436	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66635440	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0408163
11	66635450	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0416667
11	66635454	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.047619
11	66635467	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.276596
11	66635481	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0638298
11	66635494	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.12
11	66635507	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0408163
11	66635513	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0408163
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.533333
11	66635747	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.103448
11	66635749	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66635754	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66635772	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.227273
11	66635774	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66635780	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.136364
11	66636149	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.214286
11	66657536	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66657562	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.6
7	66658412	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.416667
7	66658413	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.615385
7	66658426	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.4
7	66658489	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.363636
11	66672145	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.3
11	66672281	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.5
11	66672289	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.333333
11	66672351	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intergenic	.	.	Alu	0.181818
7	66742036	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66742057	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936789	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.230769
1	66936792	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936813	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.529412
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.48
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.333333
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.117647
14	67010437	A->G	+	ENSG00000171723	GPHN	protein_coding	Intergenic	.	.	Alu	0.3
11	67295615	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.153846
7	67312534	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
17	67353432	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.454545
17	67355178	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67355229	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67355230	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.130435
17	67355240	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.470588
16	67566242	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.545455
16	67566248	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67566249	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67566357	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.153846
17	67883058	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.4
17	67883061	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.2
17	67883131	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.588235
17	67897078	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.166667
17	67897221	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.636364
17	67897253	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.3
17	68123945	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	68123955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
16	68152271	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.117647
16	68152299	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.125
16	68201829	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.2
16	68201837	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.272727
15	68202784	A->G	-	ENSG00000129007	CALML4	protein_coding	Intergenic	.	.	Alu	0.2
2	68205381	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.166667
2	68205503	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.181818
2	68205508	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.166667
2	68205509	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.166667
2	68246142	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.235294
2	68246151	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.117647
2	68246171	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.111111
2	68246181	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.1
2	68246186	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.15
2	68246199	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.375
2	68246212	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.285714
2	68246213	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.166667
2	68246239	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.214286
2	68246245	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.166667
2	68246295	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.25
2	68246345	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.5
2	68246346	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.227273
2	68326455	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9
14	68335047	A->G	+	ENSG00000182185	RAD51B	protein_coding	Intergenic	.	.	Alu	0.615385
11	68463329	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.142857
11	68482293	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.272727
11	68482294	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.181818
11	68482299	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.2
11	68482303	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.2
12	68637433	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68637436	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.157895
12	68637438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.210526
12	68637476	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68637477	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.12
12	68637517	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.208333
12	68637518	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68637587	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.272727
10	68760666	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.3
10	68760743	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.4375
10	68760744	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.3125
10	68760770	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.142857
10	68920847	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.363636
10	68920851	A->G	+	ENSG00000107625	DDX50	protein_coding	Intergenic	.	.	Alu	0.3
3	69076372	A->G	-	ENSG00000144744	UBA3	protein_coding	Intergenic	.	.	Alu	0.8
12	69244997	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.125
7	69779500	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
16	70118025	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.142857
16	70118048	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.142857
X	70138015	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.133333
X	70138016	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.214286
X	70138056	A->G	+	ENSG00000089289	IGBP1	protein_coding	Intergenic	.	.	Alu	0.166667
7	70173224	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.2
2	70219596	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
2	70219599	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.4
2	70219852	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.416667
12	70254861	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	70440125	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.8
7	70440126	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.9
7	70440297	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.25
7	70440314	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.333333
7	70440342	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.416667
16	70525801	A->G	+	ENSG00000189091	SF3B3	protein_coding	Intergenic	.	.	Alu	0.166667
16	70525804	A->G	+	ENSG00000189091	SF3B3	protein_coding	Intergenic	.	.	Alu	0.153846
9	70805358	A->G	+	ENSG00000083067	TRPM3	protein_coding	Intergenic	.	.	Alu	1
4	70828693	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.2
14	70912114	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.166667
14	70912124	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.153846
4	70923829	A->G	+	ENSG00000173542	MOB1B	protein_coding	Intergenic	.	.	Alu	0.125
5	71159096	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9
5	71159097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9
3	71267935	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	71267941	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.272727
3	71267942	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.307692
3	71268120	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.3
3	71268187	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	71268188	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.363636
3	71268231	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.190476
3	71268255	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.111111
3	71277123	A->G	-	ENSG00000277539	AC138058.1	sense_intronic	Intergenic	.	.	Alu	0.0857143
3	71327659	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.909091
3	71327660	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.909091
3	71343648	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.5
3	71343708	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.714286
3	71343709	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.714286
3	71343710	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.318182
3	71343762	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.15
3	71343771	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.136364
3	71343779	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	71343801	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.619048
3	71343802	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.35
14	71356454	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.181818
14	71356515	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.35
14	71356516	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.157895
14	71356549	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.5
14	71356650	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71373505	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
3	71381315	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
14	71440095	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.4
14	71440105	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.230769
14	71440106	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.692308
14	71440433	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.346154
14	71440498	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	71440500	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.121212
14	71440528	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.146341
14	71440563	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.238095
14	71442023	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.133333
14	71442052	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.08
14	71453803	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.7
14	71453843	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
14	71453929	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.333333
14	71480615	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.153846
14	71480642	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.272727
3	71558591	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.25
3	71558641	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.235294
3	71558659	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.285714
3	71558769	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.263158
3	71568648	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.105263
12	71661642	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.214286
12	71661654	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.125
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.545455
12	71661747	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.125
12	71774335	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.666667
12	71774337	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.578947
12	71774343	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.157895
12	71774355	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.166667
13	71775068	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.111111
12	71850546	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71850552	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.642857
12	71850777	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.111111
12	71850837	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
12	71850888	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.4
12	71850908	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
11	71895395	A->G	-	ENSG00000254469	AP002495.2	protein_coding	Intergenic	.	.	Alu	0.4
16	71898497	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.153846
3	72416418	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.142857
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.222222
3	72416696	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.176471
15	72505862	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0645161
15	72505865	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.171429
15	72505875	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0526316
15	72505999	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.266667
15	72506161	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	72506170	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.135135
15	72506171	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0540541
15	72506203	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.1
15	72506243	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.5
15	72506292	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.4
15	72510616	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.15
6	72645114	A->G	+	ENSG00000233844	KCNQ5-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
6	72690179	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.375
6	72744690	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.111111
6	72744743	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.333333
15	72779381	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.5
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.666667
15	72779509	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.230769
6	72817790	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.117647
5	72868269	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.214286
5	72868275	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.133333
5	72868311	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.461538
7	72994477	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.277778
7	72996921	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	72996955	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
6	73050096	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.125
11	73090364	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.133333
11	73138732	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.2
14	73139030	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73150947	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.461538
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.153846
9	73157434	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.142857
9	73157454	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	73157463	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	73157533	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	73189521	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73189535	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.692308
4	73189607	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73196108	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.105263
4	73196132	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0869565
4	73196137	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.666667
4	73196138	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.375
4	73196141	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.217391
4	73196199	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73196206	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73196264	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73196270	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.416667
4	73196271	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.5
4	73226486	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.142857
4	73226491	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73226665	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
4	73226817	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	73240977	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	73240978	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	73241030	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.3
4	73241035	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.272727
4	73241066	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.727273
7	73281283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
2	73457930	A->G	+	ENSG00000230002	ALMS1-IT1	sense_intronic	Intergenic	.	.	Alu	0.1875
2	73457939	A->G	+	ENSG00000230002	ALMS1-IT1	sense_intronic	Intergenic	.	.	Alu	0.133333
10	73480610	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.166667
10	73480638	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.25
10	73481254	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.272727
10	73481332	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.125
10	73490905	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.166667
6	73514311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
7	73516265	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.3125
7	73516266	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.125
7	73516267	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.333333
7	73516275	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.133333
11	73697469	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.2
8	73872899	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.166667
8	73872998	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.153846
8	73873017	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.818182
8	73873029	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.333333
8	73873050	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.2
X	73989906	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.2
X	73989937	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.142857
X	73989938	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.357143
X	73989943	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.266667
X	73989949	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.461538
X	74003356	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.909091
7	74178330	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.2
7	74178342	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.2
7	74178343	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.4
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.272727
7	74178423	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.272727
X	74223372	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74223373	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74225601	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3
X	74225612	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.6
X	74265939	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.206897
X	74265942	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0689655
X	74265972	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0833333
X	74265977	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0869565
X	74265998	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.291667
X	74266004	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.428571
X	74266028	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0930233
X	74266034	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.136364
X	74266046	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0512821
X	74266054	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.225
X	74266089	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0666667
X	74266090	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.466667
X	74266093	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.647059
X	74266097	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.151515
X	74266120	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.342857
X	74266144	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74266145	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.219512
X	74266153	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.666667
X	74266158	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.189189
X	74266166	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.103448
X	74266169	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74266294	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.148148
X	74266317	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.28
X	74266318	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.36
X	74266339	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74266368	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0952381
X	74266391	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0952381
X	74266394	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74266407	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.130435
X	74266408	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74266411	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.545455
X	74266444	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74266463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.15625
X	74266476	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1875
X	74266484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.107143
16	74312795	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.666667
16	74312873	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.142857
16	74313955	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.166667
16	74313971	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.181818
16	74314117	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.272727
16	74319885	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.545455
16	74363266	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	74704635	A->G	+	ENSG00000263001	GTF2I	protein_coding	Intergenic	.	.	Alu	0.6
7	74704643	A->G	+	ENSG00000263001	GTF2I	protein_coding	Intergenic	.	.	Alu	0.4
10	74845658	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.384615
10	74845663	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	74845681	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.153846
7	74870440	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
7	74878710	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
7	74879175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
10	75006974	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.363636
14	75029603	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.8
14	75029604	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.2
14	75029767	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.916667
14	75029802	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.166667
14	75029807	A->G	-	ENSG00000119684	MLH3	protein_coding	Intergenic	.	.	Alu	0.636364
16	75050740	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.2
17	75324615	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75346413	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.190476
17	75346414	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.25
17	75346420	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.125
17	75355904	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75355907	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3
17	75355914	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75355942	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75355954	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
10	75449032	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.125
10	75479489	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75531940	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.0769231
10	75531946	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.0952381
10	75557194	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.142857
16	75651533	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.384615
16	75651535	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.333333
16	75651536	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.333333
16	75651568	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.176471
16	75651569	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.117647
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.142857
11	76040685	A->G	+	ENSG00000198382	UVRAG	protein_coding	Intergenic	.	.	Alu	0.2
7	76345370	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.3
5	76418020	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.363636
5	76418021	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.4
5	76508129	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.125
17	76534269	A->G	-	ENSG00000161544	CYGB	protein_coding	Intergenic	.	.	Alu	0.384615
17	76534348	A->G	-	ENSG00000161544	CYGB	protein_coding	Intergenic	.	.	Alu	0.2
12	76829346	A->G	+	ENSG00000186908	ZDHHC17	protein_coding	Intergenic	.	.	Alu	0.272727
5	76957904	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.571429
5	76957905	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.625
5	76958038	A->G	+	ENSG00000145708	CRHBP	protein_coding	Intergenic	.	.	Alu	0.545455
4	76975125	A->G	+	ENSG00000138758	11-Sep	protein_coding	Intergenic	.	.	Alu	0.928571
1	77700936	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.818182
9	77837996	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
9	77838002	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77838063	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.133333
9	77838068	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77838380	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77870464	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.133333
9	77870474	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.5
9	77870560	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
17	77972401	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.2
17	77972453	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.2
9	77984308	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77986775	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.117647
9	77986776	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.125
11	78389502	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78389515	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	78396694	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.111111
11	78431673	A->G	-	ENSG00000254420	AP003086.2	antisense	Intergenic	.	.	Alu	0.176471
16	78457730	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.111111
16	78457743	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.5625
16	78457754	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.588235
16	78457769	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.105263
16	78472599	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.4
16	78472644	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.111111
16	78472658	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.1875
16	78472662	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.176471
16	78472688	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.166667
16	78472729	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.2
16	78667577	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.142857
16	78768518	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.181818
16	78802666	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.142857
16	78802691	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.117647
16	78802696	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.388889
16	78802714	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.636364
16	78802715	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.272727
16	78802730	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.153846
16	78802732	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.307692
16	78802773	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.181818
4	78867156	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.230769
4	78867157	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.785714
4	78867160	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.285714
9	79586295	A->G	+	ENSG00000106829	TLE4	protein_coding	Intergenic	.	.	Alu	0.384615
4	79933827	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.272727
4	79933873	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.461538
15	80066737	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.428571
15	80066738	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4375
15	80066739	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80066741	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.105263
15	80066776	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1875
15	80066777	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80066786	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.384615
15	80066812	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80066860	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.294118
9	80105566	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
5	81463456	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0363636
5	81463482	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
5	81463483	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0227273
5	81463543	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.375
5	81463551	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0416667
5	81463576	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.325
5	81463591	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.222222
5	81463613	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0555556
5	81463617	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.71831
5	81463618	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.2
5	81463643	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
5	81463659	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.538462
5	81463866	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.047619
5	81463907	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.142857
5	81463942	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0625
5	81463945	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0606061
5	81463946	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	81463951	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.444444
5	81463952	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.296296
5	81463968	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.193548
5	81463996	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0888889
5	81464001	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.234043
5	81464015	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.175439
5	81464019	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0338983
5	81464020	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.0862069
5	81520070	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.1875
5	81520093	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	81520106	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.2
16	81930573	A->G	+	ENSG00000197943	PLCG2	protein_coding	Intergenic	.	.	Alu	0.5
16	81930637	A->G	+	ENSG00000197943	PLCG2	protein_coding	Intergenic	.	.	Alu	0.2
17	82641209	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.181818
4	83057828	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.4
4	83106490	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.272727
16	85597266	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	85597294	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.9
16	85597299	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.416667
16	85597358	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.125
2	85610153	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.466667
6	85633777	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.125
11	86318184	A->G	+	ENSG00000149196	HIKESHI	protein_coding	Intergenic	.	.	Alu	0.153846
1	86898710	A->G	-	ENSG00000183291	SELENOF	protein_coding	Intergenic	.	.	Alu	0.3125
10	87104293	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.307692
10	87104426	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.117647
10	87104427	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.125
10	87104432	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.1875
10	87141182	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.2
4	87209978	A->G	-	ENSG00000145332	KLHL8	protein_coding	Intergenic	.	.	Alu	0.2
6	87250344	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
2	87481997	A->G	+	ENSG00000284879	AC133644.3	processed_transcript	Intergenic	.	.	Alu	0.833333
2	87481999	A->G	+	ENSG00000284879	AC133644.3	processed_transcript	Intergenic	.	.	Alu	0.909091
16	87731148	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.428571
16	87731160	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.363636
16	87731201	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.117647
16	87731202	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.176471
16	87731244	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.181818
16	87731314	A->G	-	ENSG00000104731	KLHDC4	protein_coding	Intergenic	.	.	Alu	0.214286
3	87841636	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
3	87841644	A->G	+	.	.	.	Intergenic	.	.	Alu	0.21875
3	87841645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.151515
3	87841675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
3	87841690	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	87841691	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
3	87841722	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	87841723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	87841724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	87841729	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
3	87841780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.297297
3	87841785	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	87841789	A->G	+	.	.	.	Intergenic	.	.	Alu	0.290323
3	87841793	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
3	87841832	A->G	+	.	.	.	Intergenic	.	.	Alu	0.470588
3	87841855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
3	87842236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	87842297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	87842300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.722222
3	87842302	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
3	87842373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	87842424	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	87842436	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	87937738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	87937740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	87937803	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	87937809	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	87937826	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	87937830	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
3	87937844	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
3	87937845	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
3	87937874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
4	88013622	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.272727
4	88014410	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.153846
4	88014411	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.153846
4	88014446	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.105263
9	88407202	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intergenic	.	.	Alu	0.2
16	89368308	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.545455
16	89368329	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.230769
16	89368335	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.272727
14	89467734	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.3
14	89467736	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.5
1	89764585	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.727273
16	89790932	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.8
16	89790968	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.5
16	89790974	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.947368
16	89790978	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.105263
16	89803895	A->G	-	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.181818
15	89859568	A->G	-	ENSG00000157823	AP3S2	protein_coding	Intergenic	.	.	Alu	0.166667
16	89886790	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
1	89931665	A->G	+	ENSG00000271949	AC093423.3	protein_coding	Intergenic	.	.	Alu	1
6	90243012	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.153846
6	90243017	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.363636
6	90243018	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.181818
4	90932760	A->G	+	ENSG00000184305	CCSER1	protein_coding	Intergenic	.	.	Alu	0.818182
14	91501829	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.3
15	91971141	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	1
15	91971194	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.3
15	91971274	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.928571
15	91971280	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.461538
15	91971340	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.363636
10	91998006	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.2
10	92001844	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.2
7	92091466	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.5
7	92091492	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.416667
7	92091528	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.166667
7	92220771	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.166667
7	92220805	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	92220809	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	92220810	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.615385
7	92220831	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.230769
7	92220960	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.818182
7	92220961	A->G	-	ENSG00000001631	KRIT1	protein_coding	Intergenic	.	.	Alu	0.545455
1	92259866	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.4
1	92259872	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.2
1	92259986	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.181818
1	92273517	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.2
1	92273533	A->G	-	ENSG00000174842	GLMN	protein_coding	Intergenic	.	.	Alu	0.8
9	92442277	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.166667
9	92442278	A->G	+	ENSG00000188312	CENPP	protein_coding	Intergenic	.	.	Alu	0.166667
9	92525246	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.272727
9	92525297	A->G	+	ENSG00000106823	ECM2	protein_coding	Intergenic	.	.	Alu	0.176471
7	92573354	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.142857
7	92573428	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.1875
7	92646483	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0869565
7	92711660	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.689655
7	92711675	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0625
7	92711732	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0606061
7	92711735	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0555556
7	92711736	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.361111
7	92711737	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0810811
7	92711739	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0588235
7	92711764	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.565217
7	92711766	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.166667
7	92711771	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0909091
7	92712021	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.153846
7	92712024	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.2
7	92712030	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.3125
7	92712073	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.210526
15	92889234	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0392157
15	92889276	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.106383
15	92889277	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1875
15	92889281	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.311111
15	92889345	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0487805
15	92889355	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0697674
15	92889408	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.09375
15	92889426	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.151515
7	92931785	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
7	92931791	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
7	92931827	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
1	93334201	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.428571
1	93334217	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
11	93720103	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.230769
11	93720138	A->G	+	ENSG00000166004	CEP295	protein_coding	Intergenic	.	.	Alu	0.4
8	93760659	A->G	+	ENSG00000164953	TMEM67	protein_coding	Intergenic	.	.	Alu	0.2
10	94607857	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.5625
10	94607867	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.625
12	95053816	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.166667
12	95057242	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.3
12	95476287	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.133333
12	95476292	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.133333
2	96188164	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.75
1	96725898	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	1
1	96725909	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.214286
1	96725912	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0740741
1	96725992	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.3
1	96725996	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.363636
1	96726019	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.285714
1	96726032	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.1
10	97365438	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.266667
10	97376277	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.25
10	97376300	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.1
10	97376307	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97376343	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97376379	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.272727
10	97376455	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.307692
10	97376940	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97376948	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97376985	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97377012	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97377017	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.615385
10	97377020	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.666667
X	97464274	A->G	+	ENSG00000147202	DIAPH2	protein_coding	Intergenic	.	.	Alu	0.363636
8	97652996	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
7	97971501	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
8	98043405	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.296296
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.724138
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.7
9	98115249	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.916667
2	98448191	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.2
2	98448276	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.307692
2	98448277	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.272727
5	98918130	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98918186	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	99407174	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.230769
2	99407186	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.176471
2	99407191	A->G	-	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	1
2	99719030	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.181818
2	99725068	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.166667
2	99993868	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.142857
2	100022489	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.111111
2	100022548	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.142857
2	100079121	A->G	-	ENSG00000144218	AFF3	protein_coding	Intergenic	.	.	Alu	0.4
12	100137014	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.363636
12	100137086	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.176471
14	100301148	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.227273
14	100301171	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.4
14	100301172	A->G	-	ENSG00000197119	SLC25A29	protein_coding	Intergenic	.	.	Alu	0.4
12	100627475	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.9
4	101041541	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.2
4	101041542	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.3
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0606061
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0606061
15	101284563	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.153846
15	101284608	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.181818
15	101284640	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.384615
15	101284641	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.307692
2	101288389	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.181818
X	101394175	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intergenic	.	.	Alu	0.166667
X	101394176	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intergenic	.	.	Alu	0.166667
10	101790349	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.178571
10	101790365	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.607143
10	101790369	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.407407
10	101790370	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.178571
10	101790397	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	101790437	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.194444
10	101790441	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0526316
10	101790465	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0526316
10	101790470	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.136364
10	101790471	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.186047
10	101790480	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.097561
10	101790490	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0588235
10	101790495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.238095
10	101790496	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.146341
10	101790508	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.175
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.15625
10	101790549	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.291667
10	101790550	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.304348
12	101827103	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.153846
12	101827119	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
7	101833408	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.2
7	102076151	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.545455
14	102705991	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.818182
14	102706005	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.5
4	102814413	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0625
10	103116667	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3125
10	103143528	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.380952
10	103143533	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.636364
10	103143534	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.652174
10	103143542	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.157895
10	103143581	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103166755	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103167153	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.117647
10	103170731	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103170759	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103170800	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103179073	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103179156	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103179189	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103179203	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103189754	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.285714
10	103189836	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103189852	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103190152	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.454545
14	103494361	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.2
14	103682223	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.307692
14	103682231	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.2
14	103682249	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.8
14	103682255	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.4375
14	103682319	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.0909091
14	103682325	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.173913
12	103936540	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.3
X	104125124	A->G	-	ENSG00000269743	SLC25A53	protein_coding	Intergenic	.	.	Alu	0.9
12	104460402	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0408163
12	104460444	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0408163
12	104460454	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0454545
12	104460457	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0444444
12	104460517	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.210526
12	104460576	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.105263
12	104460578	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.15
12	104460581	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104461969	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0444444
12	104461977	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0652174
12	104461978	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0869565
12	104462046	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0405405
12	104462047	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0526316
12	104462052	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0394737
12	104462119	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0357143
12	104480558	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.121212
12	104556892	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104556893	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.307692
12	104686031	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104686036	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.333333
12	104686046	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104696427	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104696436	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104696438	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
14	104823739	A->G	+	.	.	.	Intergenic	.	.	Alu	1
7	105031947	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.545455
7	105031961	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105032341	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.363636
7	105070453	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105073290	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
4	108202821	A->G	+	ENSG00000232021	LEF1-AS1	processed_transcript	Intergenic	.	.	Alu	0.941176
4	108202826	A->G	+	ENSG00000232021	LEF1-AS1	processed_transcript	Intergenic	.	.	Alu	0.944444
8	108218922	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.105263
8	108226331	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.538462
8	108226332	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.538462
8	108226361	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.583333
7	108505501	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.454545
7	108505540	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.2
7	108505545	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.181818
7	108505566	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.2
7	108505582	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.454545
6	108600359	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.7
6	108600426	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.153846
6	108600427	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.538462
2	108635360	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.166667
12	109976042	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.357143
12	109978192	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.166667
12	110319073	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
1	110352550	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.375
1	110352596	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.25
1	110352597	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.5
1	110352624	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.5
12	110447690	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.230769
12	110448062	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.166667
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.6
12	110448081	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.181818
12	110448139	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.363636
12	110497355	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.357143
12	110497381	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.272727
12	110497490	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.117647
13	110897279	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0714286
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.413793
6	110898006	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	110898053	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	110898061	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	110898067	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	110898075	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	110898102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	110898103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.134021
13	110898665	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0490196
13	110898675	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.08
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.100917
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0818182
13	110898861	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0588235
13	110898867	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0555556
13	110898870	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.162162
13	110898884	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0357143
13	110898927	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0645161
13	110898930	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.125
13	110899024	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.12
13	110899029	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.68
13	110899030	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0833333
7	111214439	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.2
7	111214445	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.2
7	111214468	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.1875
7	111214480	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.357143
7	111214481	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.142857
7	111214632	A->G	-	ENSG00000184903	IMMP2L	protein_coding	Intergenic	.	.	Alu	0.2
6	111271889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	111305208	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.7
12	111427204	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.666667
1	111632810	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.3
11	112239064	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.846154
11	112239078	A->G	+	ENSG00000150787	PTS	protein_coding	Intergenic	.	.	Alu	0.294118
1	112623574	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.818182
1	112663978	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.9
1	112664050	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.75
1	112664111	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.272727
9	113293540	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
13	113591177	A->G	+	ENSG00000198176	TFDP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	113716452	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.2
1	113716455	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.3
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.26087
3	113729061	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0869565
3	113729110	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.1875
3	113729671	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0833333
3	113729776	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.181818
3	113729804	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.307692
3	113729822	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.25
2	113753307	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.285714
2	113753311	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.157895
2	113753347	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.133333
2	113753393	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.133333
2	113936171	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.2
2	113949123	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.133333
2	113949655	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.2
13	114258867	A->G	+	ENSG00000130177	CDC16	protein_coding	Intergenic	.	.	Alu	0.5
X	115956589	A->G	-	ENSG00000235244	DANT2	lincRNA	Intergenic	.	.	Alu	0.2
12	116104148	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116165427	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.666667
12	116165428	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.266667
12	116165436	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.307692
12	116165471	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.35
12	116165551	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.285714
12	116185890	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116253924	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.363636
12	116253929	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.384615
12	116253993	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.636364
11	116922979	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.285714
11	116922982	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.461538
11	116923009	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.294118
11	116923014	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	116923028	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0714286
11	116923045	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.151515
11	116923073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.227273
11	116923081	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	116923085	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.148148
11	116923093	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	116923098	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.238095
11	116932919	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	116945098	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.08
11	116947595	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	116948073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	116948108	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117012885	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	117014072	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117014077	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117014082	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117063648	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117063706	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	117063707	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.4
11	117066132	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117066171	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117066180	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.115385
11	117066197	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0740741
11	117066206	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.08
11	117066229	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	117066783	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117070351	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	117070356	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0526316
11	117070368	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0810811
11	117070369	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0540541
11	117070405	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117070413	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.12
11	117070414	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	117070415	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.833333
11	117070568	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3125
11	117070578	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117070579	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117070890	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117076013	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117076042	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117076052	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117076128	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.294118
1	117083064	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.133333
1	117083076	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	117083079	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.473684
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.416667
12	117182700	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.166667
12	118193105	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118309654	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.545455
12	118351909	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118351985	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.238095
12	118352056	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.15
12	118352287	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.6
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.21875
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.3125
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.548387
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.517241
12	118356549	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	118446202	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.2
X	118692776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	118692786	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	118692854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
11	119001829	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	1
10	119062859	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.157895
10	119062875	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119588426	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.214286
10	119588441	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.1875
X	119624236	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
X	119659915	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.25
X	119659949	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.2
12	120556404	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.3125
12	120556410	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.25
8	120571597	A->G	-	ENSG00000172164	SNTB1	protein_coding	Intergenic	.	.	Alu	0.166667
12	120808160	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.5
12	120808169	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.2
12	120808292	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.117647
12	120863734	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.130435
9	121082891	A->G	+	ENSG00000119397	CNTRL	protein_coding	Intergenic	.	.	Alu	0.153846
12	121321503	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.230769
12	121335262	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.583333
12	121335263	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.181818
12	121335304	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.285714
3	121832400	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.133333
12	122034481	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.1875
12	122034507	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.214286
12	122034511	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.142857
12	122034547	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.133333
12	122034697	A->G	+	ENSG00000110987	BCL7A	protein_coding	Intergenic	.	.	Alu	0.333333
9	122817679	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.545455
9	122817712	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.272727
9	122901785	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.416667
8	123033000	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.4
8	123033025	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.272727
12	123213060	A->G	-	ENSG00000051825	MPHOSPH9	protein_coding	Intergenic	.	.	Alu	0.4
12	123418871	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123418872	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123418899	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123421832	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.3
12	123421864	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123421940	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.222222
12	123421941	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
X	123972942	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.125
9	124382038	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.2
9	124382424	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.2
9	124382432	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.125
9	124382480	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.157895
9	124382481	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.263158
9	124382483	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.210526
8	124502085	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	1
8	124502110	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	1
8	125257259	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.4
8	125284033	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.4
3	125363746	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.4
3	125363747	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.166667
3	125363755	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.153846
3	125363788	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.176471
3	125363814	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.461538
3	125363857	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.625
9	125834524	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
2	127366947	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.272727
2	127367008	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.307692
2	127783697	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
2	127783742	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.285714
2	127783743	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.214286
2	127783825	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127791858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15625
9	127791902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127791963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185185
9	127791964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	127791997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
9	127792116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127792212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
9	127792218	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	127792313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127792340	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127792360	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
9	127792385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
9	127795154	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1
9	127795155	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0833333
9	127795210	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.105263
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.130435
9	127795556	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.363636
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.666667
9	127795625	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
2	127805175	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.133333
9	127805306	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.235294
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.6
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.545455
9	127821929	A->G	+	ENSG00000106991	ENG	protein_coding	Intergenic	.	.	Alu	0.166667
4	128010329	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.181818
4	128010344	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.181818
4	128010841	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.7
4	128010847	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.6
7	128553328	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	128572391	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
7	128572518	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	128572519	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	128655742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
7	128655743	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	128675684	A->G	-	ENSG00000242551	POU5F1P6	unprocessed_pseudogene	Intergenic	.	.	Alu	1
8	129897985	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
9	129913971	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129914072	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.111111
9	129914074	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	1
9	129914098	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.111111
9	129921379	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129948427	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.285714
8	130001752	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130107321	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.3
11	130298267	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.4
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
9	130705267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
7	130992754	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.2
5	131319898	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.09375
5	131319899	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131319904	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.518519
5	131319930	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.107143
5	131319936	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0666667
5	131319960	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131319983	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.263158
5	131319986	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	131319992	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.176471
5	131319996	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.111111
5	131320272	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	131320285	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	131338993	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1
5	131368138	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
9	131424559	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0869565
9	131424565	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131424566	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131424571	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0869565
9	131424625	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131424636	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.133333
9	131426152	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.193548
9	131426157	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.233333
9	131426211	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.363636
9	131426231	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.454545
9	131426258	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.105263
9	131448423	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.235294
X	131743927	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intergenic	.	.	Alu	0.7
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.8125
10	131903313	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.266667
10	131903373	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.5
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.5625
10	131903387	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.1875
10	131903388	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.375
12	132656487	A->G	-	ENSG00000177084	POLE	protein_coding	Intergenic	.	.	Alu	0.416667
5	132921580	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132921585	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132926691	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
8	133520824	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.142857
7	133694140	A->G	+	ENSG00000131558	EXOC4	protein_coding	Intergenic	.	.	Alu	0.4
7	133694167	A->G	+	ENSG00000131558	EXOC4	protein_coding	Intergenic	.	.	Alu	0.2
5	134386420	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.153846
5	134386512	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.117647
2	135340135	A->G	-	ENSG00000121988	ZRANB3	protein_coding	Intergenic	.	.	Alu	0.2
7	135479305	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.153846
7	135479317	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.166667
7	135479347	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.769231
7	135504433	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.3125
7	135504434	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.266667
2	135747280	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.333333
2	135747290	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.4
2	135748943	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.117647
3	136441170	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.75
3	136441171	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.5
6	136663682	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.142857
6	136663756	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.25
6	136663774	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.307692
6	136663777	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.1875
6	136663778	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.117647
6	136663806	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.153846
6	136663816	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.214286
6	136663833	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.153846
X	136724165	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.181818
X	136724182	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.272727
X	136724231	A->G	-	ENSG00000129675	ARHGEF6	protein_coding	Intergenic	.	.	Alu	0.4
3	136735296	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136744752	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136744814	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	136744955	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.583333
X	136877553	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.0967742
X	136877559	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.0869565
9	137208027	A->G	+	ENSG00000188566	NDOR1	protein_coding	Intergenic	.	.	Alu	0.818182
6	137857252	A->G	-	ENSG00000237499	AL357060.1	antisense	Intergenic	.	.	Alu	0.4375
5	137923162	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.214286
5	137923180	A->G	-	ENSG00000078795	PKD2L2	protein_coding	Intergenic	.	.	Alu	0.181818
5	137979043	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.0869565
5	137979206	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137979226	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137980519	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.181818
5	138002445	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.307692
5	138416474	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.166667
5	138416475	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.166667
7	138476482	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.3
7	138509584	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.352941
7	138509593	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.357143
7	139056547	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.266667
7	139056567	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.285714
7	139056571	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.214286
7	139056579	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.384615
4	139088061	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	1
4	139096582	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139096618	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.272727
4	139102963	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139106881	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.25
4	139106882	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.230769
4	139114447	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
5	139304325	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.25
7	139368595	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.1875
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.133333
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139400816	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.166667
4	139400886	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.142857
4	139400894	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.1875
4	139400956	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.15
4	139400957	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.1
5	139573222	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.117647
5	139587623	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139590251	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139590254	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139590314	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139590315	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.333333
5	140536187	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.7
5	140536193	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.3
5	140536900	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	140536901	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	140536910	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.3
7	140815235	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.181818
7	140815417	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.307692
7	140815554	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.181818
7	140815566	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.333333
7	140815571	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.133333
7	140821250	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.153846
3	141518283	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.2
3	141518284	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.3
3	141518298	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.153846
3	141518321	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.2
3	142090671	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.2
3	142090764	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	142482753	A->G	-	ENSG00000175054	ATR	protein_coding	Intergenic	.	.	Alu	0.363636
2	143272510	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143272532	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	1
2	143272533	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	1
2	143272538	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143373375	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.315789
2	143373376	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.684211
2	143373422	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.388889
2	143373445	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0740741
2	143373448	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0769231
2	143373452	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.153846
2	143373464	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0909091
2	143373476	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0869565
2	143373509	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.692308
2	143373515	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.172414
2	143373575	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.0833333
2	143373584	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.208333
2	143374569	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.133333
2	143374632	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.142857
2	143374692	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.6
2	143605750	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.5
2	143605933	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.5
2	143605957	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.1875
2	143605958	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.25
2	143605968	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.153846
8	144292777	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.454545
8	144292782	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.454545
1	145776233	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145776276	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145776302	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.25
1	145776336	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.3
1	145776337	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145776383	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145776410	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.4
1	145782014	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.5625
1	145793981	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.44
1	145793992	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.210526
1	145794008	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
1	146941675	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.3
1	146941679	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.307692
1	146941709	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.4375
7	149243139	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.166667
7	149243210	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.142857
7	149243272	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.266667
7	149243278	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.190476
7	149243299	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.173913
6	149348331	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.2
6	149348735	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.181818
6	149348739	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.181818
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.125
5	150713498	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.181818
5	150713506	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.166667
5	150713535	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.166667
5	150713546	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.333333
5	150728940	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.166667
5	150728970	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.230769
4	150738167	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
4	150738169	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150738173	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.3
3	150755423	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.181818
3	150755428	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.166667
4	150841861	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.166667
4	150864732	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
1	150931505	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.666667
1	150958038	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	150958451	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.3
1	150958525	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	150993382	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.2
1	150993862	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.133333
1	150993898	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.153846
4	151110630	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151110739	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.173913
4	151110792	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0869565
4	151110851	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151126584	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151126592	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151126607	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151126618	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
3	151229607	A->G	-	ENSG00000144893	MED12L	protein_coding	Intergenic	.	.	Alu	0.2
6	151345611	A->G	+	ENSG00000131016	AKAP12	protein_coding	Intergenic	.	.	Alu	0.2
6	151393904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	151394008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	151394028	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	151394030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
1	151434993	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.4
1	151436157	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.454545
1	151436208	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151436511	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.133333
1	151436604	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.333333
1	151436608	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151447736	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151447765	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.416667
1	151450134	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.285714
1	151450137	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.153846
1	151450170	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151450201	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151450306	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151450312	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.153846
1	151450444	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
5	151793893	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.461538
5	151793907	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.411765
5	151793934	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.2
3	152275449	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.105263
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0566038
7	152391386	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
X	154066123	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
6	154793668	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.25
6	154793681	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.363636
6	154793695	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.214286
3	155093717	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.266667
3	155093735	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.285714
3	155093736	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.47619
3	155098368	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.25
3	155098398	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.142857
3	155098435	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.5
3	155107232	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.4
3	155107233	A->G	+	ENSG00000196549	MME	protein_coding	Intergenic	.	.	Alu	0.5
1	155547081	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.15
1	155547117	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.117647
1	155547132	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155547179	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.357143
1	155547202	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
3	155829033	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.133333
1	155922242	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.214286
1	155922243	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.125
1	155922244	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.588235
1	155922382	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.235294
1	155922387	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.5
1	155922417	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.384615
1	155922418	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.153846
1	155924347	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.285714
1	155924357	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.769231
6	156129576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
6	156129578	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
6	156129626	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	156129640	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	156129654	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
6	156129667	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
6	156129769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	156129782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.208333
6	156129783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
6	156177124	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
6	156177125	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
6	156185468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
6	156195861	A->G	-	.	.	.	Intergenic	.	.	Alu	0.238095
6	156195875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
6	156835125	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.3
6	156835137	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	157114262	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.4
6	157114339	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	157114346	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	157114381	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.142857
6	157114403	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.368421
6	157114413	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.3125
6	157114417	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.294118
2	158643442	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.583333
2	158643449	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.454545
2	158643462	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.2
2	158643827	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.142857
2	158643846	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.133333
2	158643865	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.157895
2	158643866	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.315789
2	158643895	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.277778
2	158643896	A->G	+	ENSG00000144283	PKP4	protein_coding	Intergenic	.	.	Alu	0.111111
3	158695365	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.307692
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.176471
7	158789495	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.142857
7	158789575	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158792989	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.545455
7	158793041	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.272727
4	159121980	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.363636
4	159121989	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.75
2	159259244	A->G	-	ENSG00000196151	WDSUB1	protein_coding	Intergenic	.	.	Alu	0.272727
2	159259267	A->G	-	ENSG00000196151	WDSUB1	protein_coding	Intergenic	.	.	Alu	0.2
2	159259284	A->G	-	ENSG00000196151	WDSUB1	protein_coding	Intergenic	.	.	Alu	0.272727
6	159734197	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.428571
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.75
6	159734266	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.1875
6	159734276	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.153846
2	159734871	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.133333
2	159734888	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.214286
2	159734892	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.285714
1	160302693	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.15
1	160302757	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.153846
1	160302759	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.416667
1	160302943	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.333333
1	160302988	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.666667
1	160302990	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.416667
2	165768923	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.153846
6	166942190	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.333333
6	166977297	A->G	-	ENSG00000227598	Z94721.1	antisense	Intergenic	.	.	Alu	0.2
6	167009271	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.166667
6	167009389	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.153846
6	167009416	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.384615
6	167020756	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.142857
6	167020762	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.117647
6	167020787	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.105263
6	167020788	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.105263
6	167020794	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.142857
6	167020854	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.1
5	169891811	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.3
5	169891832	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.153846
5	169891908	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.111111
5	169929661	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.25
5	169929662	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.538462
2	171768412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	171768413	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	171808985	A->G	-	ENSG00000075651	PLD1	protein_coding	Intergenic	.	.	Alu	0.25
3	172179696	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172179704	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.3
3	172386590	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172386595	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172386621	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
4	173210010	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.2
4	173328063	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.2
3	173780886	A->G	+	ENSG00000169760	NLGN1	protein_coding	Intergenic	.	.	Alu	0.909091
3	173780887	A->G	+	ENSG00000169760	NLGN1	protein_coding	Intergenic	.	.	Alu	0.909091
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.25
2	173946982	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.25
1	174003800	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
1	174003934	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
2	174219584	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.545455
2	174219599	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176041440	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176041444	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	176041453	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.125
1	176041454	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.125
1	176041456	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.5
1	176041462	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.266667
1	176041542	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.307692
1	176041552	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.307692
5	176454527	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.3
5	176454528	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.181818
5	177066804	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.2
5	178217680	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.2
5	178217681	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.3
5	178217738	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.294118
5	178217770	A->G	+	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.181818
5	178226161	A->G	-	ENSG00000175309	PHYKPL	protein_coding	Intergenic	.	.	Alu	0.2
2	178434213	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.181818
2	178434217	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.181818
2	178435030	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.4
2	178435031	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.454545
2	178435262	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.272727
3	179445401	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	1
3	179445413	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.272727
5	179529243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	179584454	A->G	-	ENSG00000136518	ACTL6A	protein_coding	Intergenic	.	.	Alu	1
3	180917826	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	180917844	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	180930777	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.2
3	180930870	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.25
3	180942123	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	180942124	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.333333
3	180942299	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	182906910	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.333333
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	182907012	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.9
3	182907075	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.5
3	183031777	A->G	-	ENSG00000078070	MCCC1	protein_coding	Intergenic	.	.	Alu	0.272727
3	183673058	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.347826
3	183673098	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.153846
3	184365532	A->G	+	ENSG00000163882	POLR2H	protein_coding	Intergenic	.	.	Alu	0.222222
2	184703448	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	1
2	184703491	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.363636
2	184703543	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.285714
1	184961207	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.1875
1	184961264	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.125
1	184961267	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.1875
3	185627029	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.5
3	186759305	A->G	-	ENSG00000197099	AC068631.1	antisense	Intergenic	.	.	Alu	1
2	191075943	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.214286
3	194650123	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.117647
3	194650152	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.363636
3	194650185	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.692308
3	194650186	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.230769
3	194650191	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.642857
3	194650192	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.785714
3	195321308	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.3
3	195321325	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.266667
3	195321360	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.1875
3	195321361	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.176471
3	195321369	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195417012	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.125
3	195417050	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195890566	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.9
3	195890572	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.2
3	195890621	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.181818
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.25
3	196642949	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.5
3	196642950	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.4
3	196648552	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.105263
3	196648602	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.136364
3	196648623	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.473684
3	196907381	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.142857
2	197286577	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
1	198204572	A->G	+	ENSG00000151414	NEK7	protein_coding	Intergenic	.	.	Alu	0.466667
2	203298501	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203298613	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203303520	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.384615
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.307692
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203303822	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303827	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203303958	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203303964	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203941009	A->G	-	ENSG00000163600	ICOS	protein_coding	Intergenic	.	.	Alu	1
1	205740140	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.25
1	205744695	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.105263
1	205744709	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.1
1	205744725	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.3
1	205744729	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.25
1	205744770	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.1875
1	205744793	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.3125
2	206068754	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206071103	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1
2	206793057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
2	208308321	A->G	+	ENSG00000115020	PIKFYVE	protein_coding	Intergenic	.	.	Alu	0.2
1	211969964	A->G	-	ENSG00000143493	INTS7	protein_coding	Intergenic	.	.	Alu	0.8
1	213179372	A->G	+	ENSG00000136643	RPS6KC1	protein_coding	Intergenic	.	.	Alu	0.307692
2	219373206	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
2	219373484	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	225869927	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.727273
1	225869933	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.3
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.666667
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.272727
2	233077539	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.133333
2	233077591	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.166667
2	233085312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.363636
2	233136352	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1875
2	233138229	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.25
2	233138230	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.125
2	233138294	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233158817	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233159443	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0666667
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.37931
2	233159540	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.130435
2	233159547	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233159563	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.166667
2	233159622	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0512821
2	233159635	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0444444
2	233159643	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.487179
2	233175026	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233205159	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.114286
2	233205180	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.166667
2	233205183	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.166667
2	233362489	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.2
2	233362531	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.166667
2	233375193	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.230769
2	233375212	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.363636
1	235146126	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.272727
1	235301414	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.7
1	235318300	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.409091
1	235318313	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0689655
1	235318392	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.230769
1	236600225	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.363636
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	243246343	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.307692
1	243246369	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.181818
1	243447105	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.3
1	243798128	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.4
1	243798138	A->G	-	ENSG00000117020	AKT3	protein_coding	Intergenic	.	.	Alu	0.2
1	246245299	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.181818
1	246288198	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.8
1	246288256	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.461538
1	246288277	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.25
1	246288278	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.125
1	246288281	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.1875
1	246288292	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.176471
1	246316873	A->G	-	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.545455
1	247160114	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.181818
16	2098853	A->G	-	ENSG00000008710	PKD1	protein_coding	Intron	.	.	Alu	0.5
17	2723394	A->G	-	ENSG00000277200	AC005696.4	lincRNA	Intron	.	.	Alu	0.7
17	2723418	A->G	-	ENSG00000277200	AC005696.4	lincRNA	Intron	.	.	Alu	1
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.5
19	11449919	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.230769
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.857143
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.285714
19	12660936	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.133333
19	12660937	A->G	-	ENSG00000104774	MAN2B1	protein_coding	Intron	.	.	Alu	0.133333
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.428571
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.5
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.133333
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.222222
19	21452213	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.166667
19	21452223	A->G	-	ENSG00000269237	AC010615.4	protein_coding	Intron	.	.	Alu	0.181818
22	23658353	A->G	-	ENSG00000272578	AP000347.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
15	24983646	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.3
15	24983667	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.583333
15	24983668	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.545455
15	24983729	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.142857
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0952381
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.108108
1	28509427	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.05
1	28509451	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0526316
1	28544471	A->G	+	ENSG00000279443	AL513497.1	TEC	Intron	.	.	Alu	0.466667
17	28722429	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.142857
1	29173235	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.307692
1	29173276	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0833333
17	30772387	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.285714
16	31123759	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.2
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.185185
19	38844917	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.285714
7	40049026	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.333333
7	40049028	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.2
7	40049110	A->G	+	ENSG00000065883	CDK13	protein_coding	Intron	.	.	Alu	0.6
15	41298816	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0869565
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.222222
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.136364
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.230769
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.428571
17	42014621	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.181818
17	45218486	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.272727
17	45218533	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.153846
17	45218634	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.3
15	45380003	A->G	+	ENSG00000171766	GATM	protein_coding	Intron	.	.	Alu	0.45
22	46914420	A->G	+	ENSG00000054611	TBC1D22A	protein_coding	Intron	.	.	Alu	0.181818
11	47513991	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intron	.	.	Alu	0.142857
14	49820112	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.166667
3	49962979	A->G	+	ENSG00000004534	RBM6	protein_coding	Intron	.	.	Alu	1
15	50358108	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50360622	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.5
15	50360623	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.9
15	50360698	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.666667
15	50360708	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50360710	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.266667
15	50360724	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.666667
15	50360730	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0909091
15	50360752	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.235294
15	50360754	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50360778	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.6
15	50360804	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50360816	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.470588
15	50360821	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50360830	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50360992	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.05
15	50360993	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1
15	50360995	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.175
15	50361001	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0769231
15	50361002	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.102564
15	50361015	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50361018	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0526316
15	50361024	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.21875
15	50361028	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.103448
15	50361055	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.478261
15	50361056	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50361061	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50361073	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.08
15	50361081	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50361092	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.153846
15	50361105	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.12
15	50361107	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.08
15	50361120	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.884615
15	50361136	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.212121
15	50361137	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.727273
15	50361143	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.0714286
15	50361153	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.130435
15	50361159	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.210526
15	50361163	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.444444
15	50361178	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.277778
15	50366579	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50366593	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50366631	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.833333
15	50366828	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50367238	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.541667
15	50367248	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50367252	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50367267	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.1875
15	50367276	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.461538
15	50367291	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.416667
15	50367301	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	1
15	50367315	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50367426	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368383	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368400	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50368401	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50368426	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50368432	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50368452	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3125
15	50368459	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50368468	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.266667
15	50368486	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.333333
15	50368534	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.363636
15	50368624	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.363636
15	50369661	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
15	50369828	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50369966	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.125
15	50370014	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.111111
15	50370038	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50370044	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
14	52721545	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.214286
14	52721546	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.384615
19	52723450	A->G	-	ENSG00000213020	ZNF611	protein_coding	Intron	.	.	Alu	0.3
2	53870446	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.105263
2	53870465	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.166667
4	55412140	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.2
18	55551082	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.235294
18	55551132	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.4
18	55551138	A->G	-	ENSG00000196628	TCF4	protein_coding	Intron	.	.	Alu	0.181818
12	56312844	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.111111
19	56379225	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.117647
19	56379238	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.357143
19	56379264	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.7
19	56379265	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.545455
19	56379301	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
19	56379302	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.272727
19	56379334	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
19	56379342	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
19	56379406	A->G	+	ENSG00000240225	ZNF542P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.304348
19	57870886	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intron	.	.	Alu	0.181818
17	64782811	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.6
17	64782849	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
17	64782853	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.666667
17	67956387	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.4
17	67956570	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.166667
17	67956592	A->G	+	ENSG00000279573	AC134407.2	TEC	Intron	.	.	Alu	0.272727
X	74278391	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.153846
11	76441475	A->G	-	ENSG00000255135	AP002360.1	lincRNA	Intron	.	.	Alu	0.153846
17	77089832	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intron	.	.	Alu	0.909091
17	77089838	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intron	.	.	Alu	0.8
17	77089845	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intron	.	.	Alu	0.9
17	81847816	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.153846
1	93337871	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.117647
1	93337903	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
1	93337965	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.037037
1	93337979	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.22449
1	93337985	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0434783
1	93338005	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0882353
1	93338050	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0967742
1	93338054	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.125
1	93338078	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.125
14	94053289	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.2
8	98043199	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.105263
8	98043203	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0869565
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.535714
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.232558
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.619048
8	98043294	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0266667
8	98043319	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0769231
8	98043320	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0597015
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.324324
X	101392933	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.181818
X	101392939	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.166667
X	101393016	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.111111
X	101393069	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.117647
10	103608903	A->G	+	ENSG00000107957	SH3PXD2A	protein_coding	Intron	.	.	Alu	0.166667
14	103682416	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.25
14	103682430	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.2
7	105103991	A->G	-	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.181818
7	105104002	A->G	-	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.2
7	105104030	A->G	-	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.2
8	108226318	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intron	.	.	Alu	0.538462
13	113865121	A->G	-	ENSG00000272695	GAS6-DT	lincRNA	Intron	.	.	Alu	0.2
12	119993114	A->G	-	ENSG00000135127	BICDL1	protein_coding	Intron	.	.	Alu	0.384615
9	129504304	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.230769
9	129504376	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.230769
9	129504387	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.125
9	129504406	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.125
5	140535824	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.133333
5	140535829	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.25
7	151502115	A->G	+	ENSG00000106615	RHEB	protein_coding	Intron	.	.	Alu	1
7	151502121	A->G	+	ENSG00000106615	RHEB	protein_coding	Intron	.	.	Alu	1
1	151662615	A->G	-	ENSG00000143376	SNX27	protein_coding	Intron	.	.	Alu	1
1	155670875	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.4
5	157384820	A->G	+	ENSG00000251405	AC008676.2	sense_overlapping	Intron	.	.	Alu	0.2
2	233141298	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	1
2	233141311	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0714286
2	233141312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.344828
2	233141446	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0769231
2	233141447	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0740741
2	233141487	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.136364
2	233141488	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0869565
2	233141527	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.0869565
2	233141598	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.120482
X	299801	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	299926	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	299932	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.583333
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	301185	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	2417277	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	2417334	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	2434886	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	2434906	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	2434960	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
7	2434961	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.3
X	2906392	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2906393	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.5
4	2938372	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.228571
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.172414
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.517241
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.15
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.684211
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	1
4	2938674	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	2938686	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.103448
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.16
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.193548
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.636364
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.24
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	3806217	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	1
17	3806223	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	1
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.15625
20	3870586	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3871010	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3125
20	3875295	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3875359	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	4653640	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	6379671	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	8270078	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.125
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.923077
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	8687256	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	1
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	1
11	8687288	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.470588
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.352941
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.375
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10151863	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.125
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10152049	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0882353
3	10152158	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.28
3	10152190	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	10152206	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	10280031	A->G	-	ENSG00000164237	CMBL	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10458667	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	10458699	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10458740	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10458755	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	10458801	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10458818	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10458826	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10460207	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460321	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10460337	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460475	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460507	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	10460619	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10460626	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	10460635	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.172414
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.225
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.27027
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.45
1	10460707	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10460710	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460723	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10460762	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.3
1	10461037	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10461113	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.4
1	10461115	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.375
1	10461203	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	10931797	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.5
19	10933380	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11040471	A->G	+	ENSG00000127616	SMARCA4	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.318182
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.125
19	11450478	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	11835011	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.545455
16	11835293	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.8
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	11842726	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.148148
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.135135
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	11842815	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.09375
8	11842854	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.15
8	11842904	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	11842910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	1
8	11843016	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	11914273	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.2
10	12121033	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.208333
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.24
10	12121100	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	12121127	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
10	12121688	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773911	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.25
10	14908022	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	16155738	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	16551847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	16551903	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.16
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.125
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.15625
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.125
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.615385
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	18029113	A->G	+	ENSG00000078674	PCM1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	18274075	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	18274097	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	18274101	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	18368319	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	18637204	A->G	+	ENSG00000008086	CDKL5	protein_coding	three_prime_utr	.	.	Alu	0.909091
X	18637205	A->G	+	ENSG00000008086	CDKL5	protein_coding	three_prime_utr	.	.	Alu	0.909091
X	18637226	A->G	+	ENSG00000008086	CDKL5	protein_coding	three_prime_utr	.	.	Alu	0.909091
1	19215816	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	19215916	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19215921	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.647059
1	19260007	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19260026	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.130435
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.6
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.176471
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.388889
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.2
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.157895
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	20651990	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0206186
1	20652030	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0413223
1	20652071	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.02
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.030303
22	20890585	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.421053
19	21806273	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	24077133	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0235294
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0291262
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.03
X	24077203	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0212766
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0306122
14	24125014	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	24572602	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.125
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	24839991	A->G	-	ENSG00000111913	RIPOR2	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	25447951	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	25447952	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	25448010	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	26376080	A->G	+	ENSG00000186470	BTN3A2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	27312817	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	27312844	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	27312930	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
1	28497454	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	28497848	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	28965612	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.114286
16	28966680	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	28966691	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0967742
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113208
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.170732
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0243902
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0851064
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.16
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.233333
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.116279
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.163265
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.24
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.217391
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.521739
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.55
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.619048
16	29668525	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.695652
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.259259
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.714286
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.32
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29668709	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.216216
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.219512
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0581395
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0470588
16	29668909	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.045977
16	29668933	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29668952	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0441176
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.104478
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0638298
16	29668997	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29668998	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.327273
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.372549
16	29669033	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.104167
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0819672
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.164179
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	29669082	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0338983
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.05
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.421053
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.206897
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.866667
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.341463
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.695652
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.106667
16	29669616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0240964
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.433735
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.571429
16	29669630	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.032967
16	29669633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0217391
16	29669651	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.714286
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.393939
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29669681	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.139535
16	29669684	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0735294
16	29669690	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0384615
16	29669717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29669719	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29669725	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0217391
16	29669729	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0898876
16	29669755	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.586957
16	29669756	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.422222
16	29669765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	29669785	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29669797	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29669817	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29669821	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.228571
16	29669828	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	29669831	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.340909
16	29669858	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29669859	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0655738
16	29669865	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0483871
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0508475
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0916667
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.079646
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.351852
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.144231
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0808081
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0873016
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.311475
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0483871
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0530973
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.07
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105691
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.8
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.8
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0932203
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.057377
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29670186	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29670199	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0283019
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.151515
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.257353
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0291971
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.281481
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0472441
16	29670312	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0300752
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0544218
16	29670331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0337838
16	29670336	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0472973
16	29670338	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	29670339	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0461538
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.171429
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0928571
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.202899
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0310078
16	29670398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0296296
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.167785
8	30678389	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.103448
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.1
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.45
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.2
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	32068978	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.214286
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.285714
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.25
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0740741
18	32069045	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.08
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.238095
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.307692
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0740741
18	32069103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	32176027	A->G	+	ENSG00000250135	AL049795.2	sense_intronic	three_prime_utr	.	.	Alu	0.037037
1	32231315	A->G	+	ENSG00000084623	EIF3I	protein_coding	three_prime_utr	.	.	Alu	0.0217391
2	32307656	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	32307741	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.375
2	32307749	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32307751	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32307771	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.3
2	32307809	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.16
2	32307818	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	32307880	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	32308383	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.4
2	32308527	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32308549	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	32308552	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	32308553	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	32308558	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.25
2	32308592	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32308593	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	32312322	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	32312341	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	32312367	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	32312377	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.285714
13	32399024	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.4
13	32399052	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.272727
13	32399099	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	32683135	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32683162	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.3
1	32683252	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.714286
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	33264788	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.3
21	33264835	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.2
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.7
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	33300844	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.1
21	33529628	A->G	-	ENSG00000159131	GART	protein_coding	three_prime_utr	.	.	Alu	0.4
21	33594740	A->G	-	ENSG00000205758	CRYZL1	protein_coding	three_prime_utr	.	.	Alu	0.2
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34231718	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.125
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.538462
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	35249594	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	35249610	A->G	+	ENSG00000186812	ZNF397	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	35275780	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.1
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.32
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.888889
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.1
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.75
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.380952
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	35602642	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602701	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.380952
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.4
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.2
22	36488364	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	36488492	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	36488497	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.277778
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	37204439	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	37477732	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.6
17	37477866	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	37477888	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	37477910	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.642857
17	37477953	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	37477957	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.2
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.137931
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0606061
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.121212
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	37503560	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37860989	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37861815	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0481928
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.178082
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0204082
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.304348
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0689655
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.458333
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.238095
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.25
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.125
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0392157
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	40319676	A->G	-	ENSG00000160392	C19orf47	protein_coding	three_prime_utr	.	.	Alu	0.7
19	40319688	A->G	-	ENSG00000160392	C19orf47	protein_coding	three_prime_utr	.	.	Alu	0.7
3	40466070	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.5
3	40466116	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.6
3	40466136	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.3
5	40825838	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.2
5	40825843	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	40827849	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.12
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.25
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.292683
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.560976
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.193548
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.1
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42207256	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	42207359	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	42886842	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.392857
6	42886843	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.37931
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.357143
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.571429
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.15
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.125
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.705882
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	42888318	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	42888332	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.384615
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.851852
6	42889221	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.075
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.25641
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.175
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.115385
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.357143
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.12
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43020940	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.347826
8	43021004	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43021008	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.178571
8	43023095	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	43219682	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.2
6	43615507	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.380952
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.375
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.941176
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.25
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.307692
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.411765
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	44835063	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.3
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.466667
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	1
3	45680761	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	45680889	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
3	45680999	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	46364225	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	46364438	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	46364541	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	46364551	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	46364561	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	46364622	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	46364626	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0632911
8	47977113	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0266667
8	47977145	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0212766
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.140845
8	47977687	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0729167
16	48353296	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.5
16	48353305	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48354336	A->G	-	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	48354352	A->G	-	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.2
X	48577960	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0262391
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.5
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326069	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	50326109	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	50326119	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.5
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.4
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	50930658	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	50930739	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	50931446	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.05
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.121212
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.116279
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.375
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.131579
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.203704
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0877193
12	50931600	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0357143
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	50931620	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.25
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.388889
15	51913860	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
14	52775699	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	52878361	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	52878382	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.25
19	52878388	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.25
19	53875794	A->G	+	ENSG00000179820	MYADM	protein_coding	three_prime_utr	.	.	Alu	0.0229885
19	53875799	A->G	+	ENSG00000179820	MYADM	protein_coding	three_prime_utr	.	.	Alu	0.0227273
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.695652
X	54560777	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	54560786	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.4
X	54560816	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	54560821	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	54560857	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
X	54560863	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	54560865	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.4
X	54560907	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.375
X	54560917	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.809524
X	54560919	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.4
X	54560920	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.55
X	54560929	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.15
X	54560946	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.8
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.08
X	54561032	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	55317452	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	55824991	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	56229613	A->G	+	ENSG00000139579	NABP2	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.510204
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.121212
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.108108
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.119048
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.210526
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.2
4	56460883	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.05
4	56460891	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0444444
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.155556
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.192308
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.12069
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.833333
4	56460931	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0483871
18	58752693	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	59203659	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.2
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.7
17	59203694	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.411765
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	59203699	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.125
17	59203701	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	59203708	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	59203711	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.294118
17	59203715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.294118
17	59203737	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.125
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.25
17	59204275	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0434783
17	59204555	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0465116
17	59204556	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	61801977	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.08
15	64142243	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	64142248	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.2
15	64142303	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.3
15	64142315	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	64322854	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	64322944	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	64364763	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.15
15	64364824	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0540541
15	64364948	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	64364957	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.1
15	64365091	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	64365331	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.15625
15	64365364	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.227273
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.909091
12	66123404	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.692308
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.315789
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.411765
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0350877
11	68755579	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0307692
11	68755581	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0307692
11	68755593	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0333333
11	68755604	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	68755606	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0638298
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	68755646	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	68755660	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.235294
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.136364
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.136364
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.136364
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.583333
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	69210139	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	69327265	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	69327266	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	69327305	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	69327316	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	69327332	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	69327336	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	69327346	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.1
16	69327387	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	70161260	A->G	+	ENSG00000090857	PDPR	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70372975	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70379759	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.1
16	70379760	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.103448
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.272727
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0246914
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.1125
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	73249087	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0394737
10	73249097	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0338983
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	73249122	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0263158
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.555556
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.25
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.25
7	74231740	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.05
7	74231742	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	74231776	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.108108
7	74231785	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	74231791	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.116883
7	74231844	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.046875
7	74231862	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
7	74231883	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.375
14	74736297	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	74736301	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.6875
14	74736394	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.5
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.7
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.866667
16	75599197	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	75599219	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	75889117	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	77781945	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0652174
X	77827507	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.147059
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
X	77827677	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
9	78273626	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.5
9	78273627	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.5
9	78275490	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78275491	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78275494	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78275498	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
10	80522325	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.5
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0238095
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	85319283	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.025641
2	85319306	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.075
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	85319413	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.04
1	89182510	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	89182578	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	89182714	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90083229	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	90083244	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
15	90083360	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	92090537	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	94416014	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.125
11	94416015	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	96891590	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	96891622	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	96891645	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.2
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98548857	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.481481
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	98549066	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.722222
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.888889
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.48
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.28
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.321429
12	98606054	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.636364
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	100232545	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.833333
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.944444
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.611111
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	101091449	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.666667
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.666667
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.176471
7	101091571	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
7	101093709	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.208333
7	101093710	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.25
14	102037176	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.3
7	102448761	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	102451080	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	102564664	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.3
11	108231581	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.722222
6	109463083	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	109463098	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	109463124	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.375
4	109689104	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	109689108	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.115385
6	111557769	A->G	+	ENSG00000056972	TRAF3IP2	protein_coding	three_prime_utr	.	.	Alu	0.923077
6	111557770	A->G	+	ENSG00000056972	TRAF3IP2	protein_coding	three_prime_utr	.	.	Alu	0.846154
11	111874608	A->G	+	ENSG00000255561	FDXACB1	protein_coding	three_prime_utr	.	.	Alu	0.538462
11	111874612	A->G	+	ENSG00000255561	FDXACB1	protein_coding	three_prime_utr	.	.	Alu	0.25
11	111874624	A->G	+	ENSG00000255561	FDXACB1	protein_coding	three_prime_utr	.	.	Alu	0.2
9	112685199	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	1
9	112685291	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.2
11	119001815	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.733333
X	119538614	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	119538615	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.818182
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.909091
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.15
12	123411682	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	123411726	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411727	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411796	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	123411797	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	123661884	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.291667
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.75
12	125029328	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	125029417	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0357143
11	125676034	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	126625776	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	126626118	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	126626616	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	127843890	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.846154
2	127845513	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	128036916	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	128036931	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	1
4	128036933	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	128036939	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	128036946	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	128036972	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	1
4	128037165	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.4
2	128191597	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.821429
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.642857
2	128192941	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	128192968	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	128193129	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.52381
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.466667
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	128504837	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	128504976	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.3
7	128505148	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131201055	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.277778
5	131201154	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	131201453	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	131201461	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.318182
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201527	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	131201531	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	131201560	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	131201598	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	131201599	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.894737
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.3
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	1
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.3
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141947547	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141947553	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141947579	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	1
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	141949931	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	141949976	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	141949978	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.304348
3	141949981	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.529412
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.833333
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.833333
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.347826
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.583333
8	144428898	A->G	-	ENSG00000160949	TONSL	protein_coding	three_prime_utr	.	.	Alu	0.125
8	144428922	A->G	-	ENSG00000160949	TONSL	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.7
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.7
1	145922061	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.9
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.25
6	149724611	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149724612	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	149724613	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	149724614	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149724748	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	149724782	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.388889
6	149724783	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	149724792	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.631579
6	149724793	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.2
6	149724815	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	149724862	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.461538
6	149725296	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	150308715	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308716	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.4
1	150308721	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.08
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.75
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.421053
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	1
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.608696
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.21875
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.310345
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
1	160029538	A->G	-	ENSG00000143315	PIGM	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.25
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	165075134	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165075135	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.5
4	165075136	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	165075137	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	165078928	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	171323413	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.2
4	176331857	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.03125
3	185292050	A->G	+	ENSG00000073803	MAP3K13	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	185292076	A->G	+	ENSG00000073803	MAP3K13	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	196353654	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.1
3	196353714	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.9
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	200978680	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.631579
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.7
2	203298267	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.444444
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.4
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.35
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.8
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	216501892	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	216501950	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	216501990	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	216502070	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216502080	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.108108
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.40625
2	216502175	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	216502176	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	216502177	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	216502178	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	216502180	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.517241
2	216502206	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216502216	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	216502235	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	216502248	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	216502255	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	220057919	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	220057921	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	220057988	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.8
1	220058005	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	220058029	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	228180036	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.6